ATPase subunit 8, partial (mitochondrion) [Vernicia fordii]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| YMF19_C | pfam06449 | ATP synthase YMF19, C-terminal; This domain represents the C-terminal region of YMF19 of the ... |
67-117 | 2.34e-20 | ||
ATP synthase YMF19, C-terminal; This domain represents the C-terminal region of YMF19 of the F0 complex of mitochondrial F-ATPases from plants. This family is found in conjunction with pfam02326. : Pssm-ID: 368914 Cd Length: 51 Bit Score: 78.19 E-value: 2.34e-20
|
||||||
| ATP-synt_Fo_b super family | cl21478 | F-type ATP synthase, membrane subunit b; Membrane subunit b is a component of the Fo complex ... |
6-56 | 1.19e-07 | ||
F-type ATP synthase, membrane subunit b; Membrane subunit b is a component of the Fo complex of FoF1-ATP synthase. The F-type ATP synthases (FoF1-ATPase) consist of two structural domains: the F1 (assembly factor one) complex containing the soluble catalytic core, and the Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F1 is composed of alpha (or A), beta (B), gamma (C), delta (D) and epsilon (E) subunits with a stoichiometry of 3:3:1:1:1, while Fo consists of the three subunits a, b, and c (1:2:10-14). An oligomeric ring of 10-14 c subunits (c-ring) make up the Fo rotor. The flux of protons through the ATPase channel (Fo) drives the rotation of the c-ring, which in turn is coupled to the rotation of the F1 complex gamma subunit rotor due to the permanent binding between the gamma and epsilon subunits of F1 and the c-ring of Fo. The F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. The F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis. This group also includes F-ATP synthase that has also been found in the archaea Candidatus Methanoperedens. The actual alignment was detected with superfamily member pfam02326: Pssm-ID: 473877 Cd Length: 84 Bit Score: 46.24 E-value: 1.19e-07
|
||||||
| Name | Accession | Description | Interval | E-value | ||
| YMF19_C | pfam06449 | ATP synthase YMF19, C-terminal; This domain represents the C-terminal region of YMF19 of the ... |
67-117 | 2.34e-20 | ||
ATP synthase YMF19, C-terminal; This domain represents the C-terminal region of YMF19 of the F0 complex of mitochondrial F-ATPases from plants. This family is found in conjunction with pfam02326. Pssm-ID: 368914 Cd Length: 51 Bit Score: 78.19 E-value: 2.34e-20
|
||||||
| YMF19 | pfam02326 | Plant ATP synthase F0; This family corresponds to subunit 8 (YMF19) of the F0 complex of plant ... |
6-56 | 1.19e-07 | ||
Plant ATP synthase F0; This family corresponds to subunit 8 (YMF19) of the F0 complex of plant and algae mitochondrial F-ATPases (EC:3.6.1.34). Pssm-ID: 396760 Cd Length: 84 Bit Score: 46.24 E-value: 1.19e-07
|
||||||
| Name | Accession | Description | Interval | E-value | ||
| YMF19_C | pfam06449 | ATP synthase YMF19, C-terminal; This domain represents the C-terminal region of YMF19 of the ... |
67-117 | 2.34e-20 | ||
ATP synthase YMF19, C-terminal; This domain represents the C-terminal region of YMF19 of the F0 complex of mitochondrial F-ATPases from plants. This family is found in conjunction with pfam02326. Pssm-ID: 368914 Cd Length: 51 Bit Score: 78.19 E-value: 2.34e-20
|
||||||
| YMF19 | pfam02326 | Plant ATP synthase F0; This family corresponds to subunit 8 (YMF19) of the F0 complex of plant ... |
6-56 | 1.19e-07 | ||
Plant ATP synthase F0; This family corresponds to subunit 8 (YMF19) of the F0 complex of plant and algae mitochondrial F-ATPases (EC:3.6.1.34). Pssm-ID: 396760 Cd Length: 84 Bit Score: 46.24 E-value: 1.19e-07
|
||||||
| Blast search parameters | ||||
|
