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photosystem I P700 apoprotein A1 (chloroplast) [Solanum commersonii]
Protein Classification
photosystem I core protein PsaA ( domain architecture ID 10000059 )
photosystem I core protein PsaA binds P700, the primary electron donor of PSI, which is a plastocyanin-ferredoxin oxidoreductase essential for light-driven electron transport
List of domain hits
Name
Accession
Description
Interval
E-value
psaA
CHL00056 photosystem I P700 chlorophyll a apoprotein A1
1-750
0e+00
photosystem I P700 chlorophyll a apoprotein A1
Pssm-ID: 176996
Cd Length: 750
Bit Score: 1624.44
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 1 MIIRSPEPEVKILVDRDPVKTSFE E WA R PGHFSRT I AKGPDTTTWIWNLHADAHDFDSHTSDLEEISRKVFSAHFGQLSI 80
Cdd:CHL00056 1 MIIRSPEPEVKILVDRDPVKTSFE K WA K PGHFSRT L AKGPDTTTWIWNLHADAHDFDSHTSDLEEISRKVFSAHFGQLSI 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 81 IFLWLSGMYFHGARFSNYEAWLSDPTHI G PSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQ L WRASGITSELQLYCTA 160
Cdd:CHL00056 81 IFLWLSGMYFHGARFSNYEAWLSDPTHI K PSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQ I WRASGITSELQLYCTA 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 161 IGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQ V HVSLPINQ F L N AGVDPKEIPLPHEF 240
Cdd:CHL00056 161 IGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQ I HVSLPINQ L L D AGVDPKEIPLPHEF 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 241 ILNRDLLAQLYPSFA E G A TPFFTLNWS K Y A DFLTFRGGL D PVTGGLWLTDIAHHHLAIA I LFLIAGHMYRTNWGIGH G LK 320
Cdd:CHL00056 241 ILNRDLLAQLYPSFA K G L TPFFTLNWS E Y S DFLTFRGGL N PVTGGLWLTDIAHHHLAIA V LFLIAGHMYRTNWGIGH S LK 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 321 D ILEAHKGPFTG Q GHKGLYEILTTSWHAQL S LNLAMLGSLTI V VAHHMYSMPPYPYLATDYGTQLSLFTHHMWIGGFLIV 400
Cdd:CHL00056 321 E ILEAHKGPFTG E GHKGLYEILTTSWHAQL A LNLAMLGSLTI I VAHHMYSMPPYPYLATDYGTQLSLFTHHMWIGGFLIV 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 401 GAAAHAAIFMVRDYDPTTRYN D LLDRVLRHRDAIISHLNW A CIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQP V F 480
Cdd:CHL00056 401 GAAAHAAIFMVRDYDPTTRYN N LLDRVLRHRDAIISHLNW V CIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQP I F 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 481 AQWIQNTHALAPGATAPGATASTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRL 560
Cdd:CHL00056 481 AQWIQNTHALAPGATAPGATASTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRL 560
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 561 IPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGS V SDQGVVTHITGGNFAQSSIT 640
Cdd:CHL00056 561 IPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGS I SDQGVVTHITGGNFAQSSIT 640
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 641 INGWLRDFLWAQASQVIQSYGSSLSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPA T QPRALSI I 720
Cdd:CHL00056 641 INGWLRDFLWAQASQVIQSYGSSLSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPA I QPRALSI V 720
730 740 750
....*....|....*....|....*....|
gi 2392240573 721 QGRAVGV T HYLLGGIATTWAFFLARIIAVG 750
Cdd:CHL00056 721 QGRAVGV A HYLLGGIATTWAFFLARIIAVG 750
Name
Accession
Description
Interval
E-value
psaA
CHL00056 photosystem I P700 chlorophyll a apoprotein A1
1-750
0e+00
photosystem I P700 chlorophyll a apoprotein A1
Pssm-ID: 176996
Cd Length: 750
Bit Score: 1624.44
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 1 MIIRSPEPEVKILVDRDPVKTSFE E WA R PGHFSRT I AKGPDTTTWIWNLHADAHDFDSHTSDLEEISRKVFSAHFGQLSI 80
Cdd:CHL00056 1 MIIRSPEPEVKILVDRDPVKTSFE K WA K PGHFSRT L AKGPDTTTWIWNLHADAHDFDSHTSDLEEISRKVFSAHFGQLSI 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 81 IFLWLSGMYFHGARFSNYEAWLSDPTHI G PSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQ L WRASGITSELQLYCTA 160
Cdd:CHL00056 81 IFLWLSGMYFHGARFSNYEAWLSDPTHI K PSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQ I WRASGITSELQLYCTA 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 161 IGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQ V HVSLPINQ F L N AGVDPKEIPLPHEF 240
Cdd:CHL00056 161 IGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQ I HVSLPINQ L L D AGVDPKEIPLPHEF 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 241 ILNRDLLAQLYPSFA E G A TPFFTLNWS K Y A DFLTFRGGL D PVTGGLWLTDIAHHHLAIA I LFLIAGHMYRTNWGIGH G LK 320
Cdd:CHL00056 241 ILNRDLLAQLYPSFA K G L TPFFTLNWS E Y S DFLTFRGGL N PVTGGLWLTDIAHHHLAIA V LFLIAGHMYRTNWGIGH S LK 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 321 D ILEAHKGPFTG Q GHKGLYEILTTSWHAQL S LNLAMLGSLTI V VAHHMYSMPPYPYLATDYGTQLSLFTHHMWIGGFLIV 400
Cdd:CHL00056 321 E ILEAHKGPFTG E GHKGLYEILTTSWHAQL A LNLAMLGSLTI I VAHHMYSMPPYPYLATDYGTQLSLFTHHMWIGGFLIV 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 401 GAAAHAAIFMVRDYDPTTRYN D LLDRVLRHRDAIISHLNW A CIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQP V F 480
Cdd:CHL00056 401 GAAAHAAIFMVRDYDPTTRYN N LLDRVLRHRDAIISHLNW V CIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQP I F 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 481 AQWIQNTHALAPGATAPGATASTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRL 560
Cdd:CHL00056 481 AQWIQNTHALAPGATAPGATASTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRL 560
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 561 IPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGS V SDQGVVTHITGGNFAQSSIT 640
Cdd:CHL00056 561 IPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGS I SDQGVVTHITGGNFAQSSIT 640
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 641 INGWLRDFLWAQASQVIQSYGSSLSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPA T QPRALSI I 720
Cdd:CHL00056 641 INGWLRDFLWAQASQVIQSYGSSLSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPA I QPRALSI V 720
730 740 750
....*....|....*....|....*....|
gi 2392240573 721 QGRAVGV T HYLLGGIATTWAFFLARIIAVG 750
Cdd:CHL00056 721 QGRAVGV A HYLLGGIATTWAFFLARIIAVG 750
psaA
TIGR01335 photosystem I core protein PsaA; The core proteins of photosystem I are PsaA and PsaB, ...
1-750
0e+00
photosystem I core protein PsaA; The core proteins of photosystem I are PsaA and PsaB, homologous integral membrane proteins that form a heterodimer. The heterodimer binds the electron-donating chlorophyll dimer P700, as well as chlorophyll, phylloquinone, and 4FE-4S electron acceptors. This model describes PsaA only. [Energy metabolism, Photosynthesis]
Pssm-ID: 130402 [Multi-domain]
Cd Length: 752
Bit Score: 1465.18
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 1 M I I RS PE P E --- V KILVDRDPV K TSFE E WA R PGHFSRT I AKGP D TTTWIWNLHADAHDFDSHTSDLE E ISRK V FSAHFGQ 77
Cdd:TIGR01335 1 M T I SP PE R E qkt A KILVDRDPV P TSFE K WA K PGHFSRT L AKGP K TTTWIWNLHADAHDFDSHTSDLE D ISRK I FSAHFGQ 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 78 LS I IF L WLSGMYFHGARFSNYEAWLSDPTHI G PSAQVVWPIVGQEILNGDVGGGF R GIQITSGFFQLWRASGIT S ELQLY 157
Cdd:TIGR01335 81 LS V IF I WLSGMYFHGARFSNYEAWLSDPTHI K PSAQVVWPIVGQEILNGDVGGGF H GIQITSGFFQLWRASGIT N ELQLY 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 158 C TAIG A LV F A A LMLFAGWFHYHKAAPKL A WFQ D VESMLNHHLAGLLGLGSLSWAGHQ V HVSLPIN QF L N AGVDPK E IPLP 237
Cdd:TIGR01335 161 V TAIG G LV M A G LMLFAGWFHYHKAAPKL E WFQ N VESMLNHHLAGLLGLGSLSWAGHQ I HVSLPIN KL L D AGVDPK D IPLP 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 238 HEFILNR D L L AQLYPSFA E G A TPFFTLNW SK Y A DFLTFRGGL D PVTGGLWL T DIAHHHLAIA I LF L IAGHMYRTNWGIGH 317
Cdd:TIGR01335 241 HEFILNR E L M AQLYPSFA S G L TPFFTLNW GA Y S DFLTFRGGL N PVTGGLWL S DIAHHHLAIA V LF I IAGHMYRTNWGIGH 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 318 GL K D ILEAHKGPFTG Q GHKGLYE I LTTSWHAQL SL NLAMLGSL T I V VAHHMY S MPPYPYLATDY G TQLSLFTHHMWIGGF 397
Cdd:TIGR01335 321 SI K E ILEAHKGPFTG S GHKGLYE A LTTSWHAQL AI NLAMLGSL S I I VAHHMY A MPPYPYLATDY P TQLSLFTHHMWIGGF 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 398 LIVGAAAH A AIFMVRDYDP TTR YN DL LDRV L RHRDAIISHLNW A CIFLGFHSFGLYIHNDTM S ALGRPQDMFSDTAIQLQ 477
Cdd:TIGR01335 401 LIVGAAAH G AIFMVRDYDP SQN YN NV LDRV I RHRDAIISHLNW V CIFLGFHSFGLYIHNDTM R ALGRPQDMFSDTAIQLQ 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 478 PVFAQWIQN T H A LAPG A TAP G A T A S TS LTW g GG DL VAVGGKVA LL PI P LGTADF L VHHIHAFTIHVTVLILLKGVLFAR S 557
Cdd:TIGR01335 481 PVFAQWIQN L H T LAPG N TAP N A L A T TS YAF - GG EV VAVGGKVA MM PI K LGTADF M VHHIHAFTIHVTVLILLKGVLFAR N 559
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 558 SRLIPDKANLGFRFPCDGPGRGGTCQVS A WDHVFLGLFWMYN S ISVVIFHFSWKMQSDVWG S VS DQ G V V T HITGGNFAQS 637
Cdd:TIGR01335 560 SRLIPDKANLGFRFPCDGPGRGGTCQVS G WDHVFLGLFWMYN C ISVVIFHFSWKMQSDVWG T VS QN G L V S HITGGNFAQS 639
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 638 S ITINGWLRDFLWAQASQVIQSYGSSLSAYGL F FLGAHF V WAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPA T QPRAL 717
Cdd:TIGR01335 640 A ITINGWLRDFLWAQASQVIQSYGSSLSAYGL M FLGAHF I WAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPA I QPRAL 719
730 740 750
....*....|....*....|....*....|...
gi 2392240573 718 SIIQGRAVGV T HYLLGGIATTWAFFLARII A VG 750
Cdd:TIGR01335 720 SIIQGRAVGV A HYLLGGIATTWAFFLARII S VG 752
PsaA
COG5701 Photosystem I reaction center subunit A1, PsaA [Energy production and conversion]; Photosystem ...
1-750
0e+00
Photosystem I reaction center subunit A1, PsaA [Energy production and conversion]; Photosystem I reaction center subunit A1, PsaA is part of the Pathway/BioSystem: Photosystem I
Pssm-ID: 444411
Cd Length: 755
Bit Score: 1371.07
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 1 M I I RS PE P E -- V KIL VD R DPV K TSFE E W AR PGHF S RT I AKGP D TTTWIWNLHA D AHDFD S HTSDLEEISRK V FSAHFG Q L 78
Cdd:COG5701 1 M T I SP PE R E ek V RVP VD N DPV P TSFE K W GK PGHF D RT L AKGP K TTTWIWNLHA L AHDFD T HTSDLEEISRK I FSAHFG H L 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 79 SII F L WLSGM Y FHGARFSNY E AWL S DPT HIG PSAQVVWPIVGQEILN G DVGGGF R GIQITSG F FQ L WRA S GIT S E L QLYC 158
Cdd:COG5701 81 AVV F I WLSGM F FHGARFSNY T AWL A DPT GVK PSAQVVWPIVGQEILN A DVGGGF H GIQITSG L FQ M WRA W GIT N E F QLYC 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 159 TAIGALV F AALMLFAGWFHYHK A APKL A WFQ D VESMLNHHLAGLLGLGSL S W A GH QV HVSLP I N QF L N AGV DPKE IPLPH 238
Cdd:COG5701 161 TAIGALV M AALMLFAGWFHYHK R APKL E WFQ N VESMLNHHLAGLLGLGSL A W T GH LI HVSLP V N AL L D AGV AAAD IPLPH 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 239 EF i LN RD L L AQLYP S FA E G AT PFFTLNW SKYA DFLTF R GGL D PVTGGLWLTDIAHHHLAIA I LF L IAGHMYRTNWGIGH G 318
Cdd:COG5701 241 EF - LN PS L M AQLYP G FA S G VG PFFTLNW GAFS DFLTF K GGL N PVTGGLWLTDIAHHHLAIA V LF I IAGHMYRTNWGIGH S 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 319 L K D ILEAHKGP --- FTG - Q GHKGLYE I LTTSWHAQL SL NLAM L GSL T I V VAHHMY S MPPYPYLATDY G TQLSLFTHHMWI 394
Cdd:COG5701 320 M K E ILEAHKGP pll FTG p E GHKGLYE V LTTSWHAQL AI NLAM M GSL S I I VAHHMY A MPPYPYLATDY P TQLSLFTHHMWI 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 395 GGFLIVGAAAHAAIFMVRDYDP TTRY N DL LDRVLRHRDAIISHLNW A CIFLGFHSFGLYIHNDTM S ALGRPQDMFSDTAI 474
Cdd:COG5701 400 GGFLIVGAAAHAAIFMVRDYDP AVNQ N NV LDRVLRHRDAIISHLNW V CIFLGFHSFGLYIHNDTM R ALGRPQDMFSDTAI 479
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 475 QLQPVFAQWIQN T HA L APG - ATAP G A TAST S LTW GG g D L VAVGGKVA LL PIPLGTADF LV HHIHAFTIHVTVLILLKGVL 553
Cdd:COG5701 480 QLQPVFAQWIQN L HA S APG t ATAP N A GGTV S EAF GG - D V VAVGGKVA MM PIPLGTADF MI HHIHAFTIHVTVLILLKGVL 558
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 554 FARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNS I SVVIFHFSWKMQSDVWG S V SDQ G V V T HITGGN 633
Cdd:COG5701 559 FARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNS L SVVIFHFSWKMQSDVWG T V NAD G S V N HITGGN 638
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 634 FAQSSITINGWLRDFLWAQ A SQVI Q SYGS S LSAYGL F FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPA T Q 713
Cdd:COG5701 639 FAQSSITINGWLRDFLWAQ S SQVI N SYGS A LSAYGL M FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPA I Q 718
730 740 750
....*....|....*....|....*....|....*..
gi 2392240573 714 PRALSI I QGRAVGV T HYLLGGIATTWAFFLAR I IA V G 750
Cdd:COG5701 719 PRALSI T QGRAVGV A HYLLGGIATTWAFFLAR L IA L G 755
PsaA_PsaB
pfam00223 Photosystem I psaA/psaB protein;
32-744
0e+00
Photosystem I psaA/psaB protein;
Pssm-ID: 459719
Cd Length: 719
Bit Score: 1256.60
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 32 FS RTI A K GP D TT T WIWNLHA D AHDF D SH TS D L EE I SRK V FSAHFG Q L S IIFLWLSG MY FHGA R FSN Y EAWL S DP T H IG P S 111
Cdd:pfam00223 1 FS QDL A Q GP K TT R WIWNLHA T AHDF E SH DG D T EE L SRK I FSAHFG H L A IIFLWLSG NL FHGA W FSN F EAWL A DP L H VK P I 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 112 A Q VVWP IV GQEILN G -- DVG G GF R G I QITSG F FQ L WR AS G I T SEL QLY CT AIG A L VF AALMLFAGW F HYHK A APKL A WF Q 189
Cdd:pfam00223 81 A H VVWP HF GQEILN A ft DVG A GF P G V QITSG L FQ W WR TI G M T TNG QLY AG AIG L L IL AALMLFAGW L HYHK F APKL E WF K 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 190 DV ESMLNHHLAGL L GLGSL S W A GH QV HV SL P INQF L N AGV DPKE IPLPH E F i LN R DL LA QLYPSFA E G AT PFFT L NW SK Y 269
Cdd:pfam00223 161 NA ESMLNHHLAGL F GLGSL A W T GH LI HV AI P ESRL L D AGV AAAD IPLPH P F - LN P DL MG QLYPSFA A G LG PFFT G NW GA Y 239
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 270 AD F LTF R GGL D P V TG G LWLTDIAHHHLAIA I LF L IAGHMYRTN W GIGH GL K D ILEAHKGP -- FTG Q GHKGLYE I L TT SWH 347
Cdd:pfam00223 240 AD I LTF K GGL H P Q TG S LWLTDIAHHHLAIA V LF I IAGHMYRTN F GIGH SM K E ILEAHKGP gg FTG E GHKGLYE T L NN SWH 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 348 AQL S LNLAMLGS L TI V VAHHMY SM PPYPY L ATDY G TQ LS LFTHH M WIGGFL I VGA A AH A AIFMVRDYDP TTRY N DL LDRV 427
Cdd:pfam00223 320 AQL G LNLAMLGS V TI I VAHHMY AL PPYPY I ATDY T TQ AA LFTHH Q WIGGFL M VGA F AH G AIFMVRDYDP EVNK N NV LDRV 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 428 L R HRDAIISHL N W A C I FLGFH S FGLY I HNDTM S A L GRP Q DMFSDTAI Q L Q PVFAQWIQ ---------- N TH A L APG A TAP 497
Cdd:pfam00223 400 L E HRDAIISHL S W V C L FLGFH T FGLY V HNDTM R A F GRP E DMFSDTAI L L E PVFAQWIQ aahgkalygf N LL A S APG S TAP 479
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 498 G A T A ST S LT W GG GD L V A VGGKV A L L PIPLGTADFLVHHI H AF T IHVTVLILLKGVL F ARSSRL I PDK AN LGFRFPCDGPG 577
Cdd:pfam00223 480 N A G A GV S DV W LP GD A V N VGGKV S L F PIPLGTADFLVHHI I AF G IHVTVLILLKGVL D ARSSRL M PDK KD LGFRFPCDGPG 559
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 578 RGGTCQ V SAWDHVFLGLFWMYN S IS V VIF H F S WKMQSDVWG SVS dqgvvth ITGG N FAQSSI T INGWLRDFLWAQ A SQVI 657
Cdd:pfam00223 560 RGGTCQ I SAWDHVFLGLFWMYN T IS W VIF Y F H WKMQSDVWG GNV ------- ITGG Q FAQSSI Y INGWLRDFLWAQ S SQVI 632
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 658 Q SYG S SLS A YGL F FLG A HFVWAFSLMFLFSGRGYWQELIESIVWAHNKLK V AP AT QPRALSI I QGRAVGV T H Y LLGGI A T 737
Cdd:pfam00223 633 N SYG N SLS V YGL M FLG G HFVWAFSLMFLFSGRGYWQELIESIVWAHNKLK L AP LI QPRALSI V QGRAVGV A H F LLGGI V T 712
....*..
gi 2392240573 738 TWAFF L A 744
Cdd:pfam00223 713 TWAFF I A 719
Name
Accession
Description
Interval
E-value
psaA
CHL00056 photosystem I P700 chlorophyll a apoprotein A1
1-750
0e+00
photosystem I P700 chlorophyll a apoprotein A1
Pssm-ID: 176996
Cd Length: 750
Bit Score: 1624.44
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 1 MIIRSPEPEVKILVDRDPVKTSFE E WA R PGHFSRT I AKGPDTTTWIWNLHADAHDFDSHTSDLEEISRKVFSAHFGQLSI 80
Cdd:CHL00056 1 MIIRSPEPEVKILVDRDPVKTSFE K WA K PGHFSRT L AKGPDTTTWIWNLHADAHDFDSHTSDLEEISRKVFSAHFGQLSI 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 81 IFLWLSGMYFHGARFSNYEAWLSDPTHI G PSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQ L WRASGITSELQLYCTA 160
Cdd:CHL00056 81 IFLWLSGMYFHGARFSNYEAWLSDPTHI K PSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQ I WRASGITSELQLYCTA 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 161 IGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQ V HVSLPINQ F L N AGVDPKEIPLPHEF 240
Cdd:CHL00056 161 IGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQ I HVSLPINQ L L D AGVDPKEIPLPHEF 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 241 ILNRDLLAQLYPSFA E G A TPFFTLNWS K Y A DFLTFRGGL D PVTGGLWLTDIAHHHLAIA I LFLIAGHMYRTNWGIGH G LK 320
Cdd:CHL00056 241 ILNRDLLAQLYPSFA K G L TPFFTLNWS E Y S DFLTFRGGL N PVTGGLWLTDIAHHHLAIA V LFLIAGHMYRTNWGIGH S LK 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 321 D ILEAHKGPFTG Q GHKGLYEILTTSWHAQL S LNLAMLGSLTI V VAHHMYSMPPYPYLATDYGTQLSLFTHHMWIGGFLIV 400
Cdd:CHL00056 321 E ILEAHKGPFTG E GHKGLYEILTTSWHAQL A LNLAMLGSLTI I VAHHMYSMPPYPYLATDYGTQLSLFTHHMWIGGFLIV 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 401 GAAAHAAIFMVRDYDPTTRYN D LLDRVLRHRDAIISHLNW A CIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQP V F 480
Cdd:CHL00056 401 GAAAHAAIFMVRDYDPTTRYN N LLDRVLRHRDAIISHLNW V CIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQP I F 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 481 AQWIQNTHALAPGATAPGATASTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRL 560
Cdd:CHL00056 481 AQWIQNTHALAPGATAPGATASTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRL 560
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 561 IPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGS V SDQGVVTHITGGNFAQSSIT 640
Cdd:CHL00056 561 IPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGS I SDQGVVTHITGGNFAQSSIT 640
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 641 INGWLRDFLWAQASQVIQSYGSSLSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPA T QPRALSI I 720
Cdd:CHL00056 641 INGWLRDFLWAQASQVIQSYGSSLSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPA I QPRALSI V 720
730 740 750
....*....|....*....|....*....|
gi 2392240573 721 QGRAVGV T HYLLGGIATTWAFFLARIIAVG 750
Cdd:CHL00056 721 QGRAVGV A HYLLGGIATTWAFFLARIIAVG 750
psaA
TIGR01335 photosystem I core protein PsaA; The core proteins of photosystem I are PsaA and PsaB, ...
1-750
0e+00
photosystem I core protein PsaA; The core proteins of photosystem I are PsaA and PsaB, homologous integral membrane proteins that form a heterodimer. The heterodimer binds the electron-donating chlorophyll dimer P700, as well as chlorophyll, phylloquinone, and 4FE-4S electron acceptors. This model describes PsaA only. [Energy metabolism, Photosynthesis]
Pssm-ID: 130402 [Multi-domain]
Cd Length: 752
Bit Score: 1465.18
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 1 M I I RS PE P E --- V KILVDRDPV K TSFE E WA R PGHFSRT I AKGP D TTTWIWNLHADAHDFDSHTSDLE E ISRK V FSAHFGQ 77
Cdd:TIGR01335 1 M T I SP PE R E qkt A KILVDRDPV P TSFE K WA K PGHFSRT L AKGP K TTTWIWNLHADAHDFDSHTSDLE D ISRK I FSAHFGQ 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 78 LS I IF L WLSGMYFHGARFSNYEAWLSDPTHI G PSAQVVWPIVGQEILNGDVGGGF R GIQITSGFFQLWRASGIT S ELQLY 157
Cdd:TIGR01335 81 LS V IF I WLSGMYFHGARFSNYEAWLSDPTHI K PSAQVVWPIVGQEILNGDVGGGF H GIQITSGFFQLWRASGIT N ELQLY 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 158 C TAIG A LV F A A LMLFAGWFHYHKAAPKL A WFQ D VESMLNHHLAGLLGLGSLSWAGHQ V HVSLPIN QF L N AGVDPK E IPLP 237
Cdd:TIGR01335 161 V TAIG G LV M A G LMLFAGWFHYHKAAPKL E WFQ N VESMLNHHLAGLLGLGSLSWAGHQ I HVSLPIN KL L D AGVDPK D IPLP 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 238 HEFILNR D L L AQLYPSFA E G A TPFFTLNW SK Y A DFLTFRGGL D PVTGGLWL T DIAHHHLAIA I LF L IAGHMYRTNWGIGH 317
Cdd:TIGR01335 241 HEFILNR E L M AQLYPSFA S G L TPFFTLNW GA Y S DFLTFRGGL N PVTGGLWL S DIAHHHLAIA V LF I IAGHMYRTNWGIGH 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 318 GL K D ILEAHKGPFTG Q GHKGLYE I LTTSWHAQL SL NLAMLGSL T I V VAHHMY S MPPYPYLATDY G TQLSLFTHHMWIGGF 397
Cdd:TIGR01335 321 SI K E ILEAHKGPFTG S GHKGLYE A LTTSWHAQL AI NLAMLGSL S I I VAHHMY A MPPYPYLATDY P TQLSLFTHHMWIGGF 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 398 LIVGAAAH A AIFMVRDYDP TTR YN DL LDRV L RHRDAIISHLNW A CIFLGFHSFGLYIHNDTM S ALGRPQDMFSDTAIQLQ 477
Cdd:TIGR01335 401 LIVGAAAH G AIFMVRDYDP SQN YN NV LDRV I RHRDAIISHLNW V CIFLGFHSFGLYIHNDTM R ALGRPQDMFSDTAIQLQ 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 478 PVFAQWIQN T H A LAPG A TAP G A T A S TS LTW g GG DL VAVGGKVA LL PI P LGTADF L VHHIHAFTIHVTVLILLKGVLFAR S 557
Cdd:TIGR01335 481 PVFAQWIQN L H T LAPG N TAP N A L A T TS YAF - GG EV VAVGGKVA MM PI K LGTADF M VHHIHAFTIHVTVLILLKGVLFAR N 559
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 558 SRLIPDKANLGFRFPCDGPGRGGTCQVS A WDHVFLGLFWMYN S ISVVIFHFSWKMQSDVWG S VS DQ G V V T HITGGNFAQS 637
Cdd:TIGR01335 560 SRLIPDKANLGFRFPCDGPGRGGTCQVS G WDHVFLGLFWMYN C ISVVIFHFSWKMQSDVWG T VS QN G L V S HITGGNFAQS 639
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 638 S ITINGWLRDFLWAQASQVIQSYGSSLSAYGL F FLGAHF V WAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPA T QPRAL 717
Cdd:TIGR01335 640 A ITINGWLRDFLWAQASQVIQSYGSSLSAYGL M FLGAHF I WAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPA I QPRAL 719
730 740 750
....*....|....*....|....*....|...
gi 2392240573 718 SIIQGRAVGV T HYLLGGIATTWAFFLARII A VG 750
Cdd:TIGR01335 720 SIIQGRAVGV A HYLLGGIATTWAFFLARII S VG 752
PsaA
COG5701 Photosystem I reaction center subunit A1, PsaA [Energy production and conversion]; Photosystem ...
1-750
0e+00
Photosystem I reaction center subunit A1, PsaA [Energy production and conversion]; Photosystem I reaction center subunit A1, PsaA is part of the Pathway/BioSystem: Photosystem I
Pssm-ID: 444411
Cd Length: 755
Bit Score: 1371.07
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 1 M I I RS PE P E -- V KIL VD R DPV K TSFE E W AR PGHF S RT I AKGP D TTTWIWNLHA D AHDFD S HTSDLEEISRK V FSAHFG Q L 78
Cdd:COG5701 1 M T I SP PE R E ek V RVP VD N DPV P TSFE K W GK PGHF D RT L AKGP K TTTWIWNLHA L AHDFD T HTSDLEEISRK I FSAHFG H L 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 79 SII F L WLSGM Y FHGARFSNY E AWL S DPT HIG PSAQVVWPIVGQEILN G DVGGGF R GIQITSG F FQ L WRA S GIT S E L QLYC 158
Cdd:COG5701 81 AVV F I WLSGM F FHGARFSNY T AWL A DPT GVK PSAQVVWPIVGQEILN A DVGGGF H GIQITSG L FQ M WRA W GIT N E F QLYC 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 159 TAIGALV F AALMLFAGWFHYHK A APKL A WFQ D VESMLNHHLAGLLGLGSL S W A GH QV HVSLP I N QF L N AGV DPKE IPLPH 238
Cdd:COG5701 161 TAIGALV M AALMLFAGWFHYHK R APKL E WFQ N VESMLNHHLAGLLGLGSL A W T GH LI HVSLP V N AL L D AGV AAAD IPLPH 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 239 EF i LN RD L L AQLYP S FA E G AT PFFTLNW SKYA DFLTF R GGL D PVTGGLWLTDIAHHHLAIA I LF L IAGHMYRTNWGIGH G 318
Cdd:COG5701 241 EF - LN PS L M AQLYP G FA S G VG PFFTLNW GAFS DFLTF K GGL N PVTGGLWLTDIAHHHLAIA V LF I IAGHMYRTNWGIGH S 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 319 L K D ILEAHKGP --- FTG - Q GHKGLYE I LTTSWHAQL SL NLAM L GSL T I V VAHHMY S MPPYPYLATDY G TQLSLFTHHMWI 394
Cdd:COG5701 320 M K E ILEAHKGP pll FTG p E GHKGLYE V LTTSWHAQL AI NLAM M GSL S I I VAHHMY A MPPYPYLATDY P TQLSLFTHHMWI 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 395 GGFLIVGAAAHAAIFMVRDYDP TTRY N DL LDRVLRHRDAIISHLNW A CIFLGFHSFGLYIHNDTM S ALGRPQDMFSDTAI 474
Cdd:COG5701 400 GGFLIVGAAAHAAIFMVRDYDP AVNQ N NV LDRVLRHRDAIISHLNW V CIFLGFHSFGLYIHNDTM R ALGRPQDMFSDTAI 479
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 475 QLQPVFAQWIQN T HA L APG - ATAP G A TAST S LTW GG g D L VAVGGKVA LL PIPLGTADF LV HHIHAFTIHVTVLILLKGVL 553
Cdd:COG5701 480 QLQPVFAQWIQN L HA S APG t ATAP N A GGTV S EAF GG - D V VAVGGKVA MM PIPLGTADF MI HHIHAFTIHVTVLILLKGVL 558
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 554 FARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNS I SVVIFHFSWKMQSDVWG S V SDQ G V V T HITGGN 633
Cdd:COG5701 559 FARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNS L SVVIFHFSWKMQSDVWG T V NAD G S V N HITGGN 638
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 634 FAQSSITINGWLRDFLWAQ A SQVI Q SYGS S LSAYGL F FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPA T Q 713
Cdd:COG5701 639 FAQSSITINGWLRDFLWAQ S SQVI N SYGS A LSAYGL M FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPA I Q 718
730 740 750
....*....|....*....|....*....|....*..
gi 2392240573 714 PRALSI I QGRAVGV T HYLLGGIATTWAFFLAR I IA V G 750
Cdd:COG5701 719 PRALSI T QGRAVGV A HYLLGGIATTWAFFLAR L IA L G 755
PsaA_PsaB
pfam00223 Photosystem I psaA/psaB protein;
32-744
0e+00
Photosystem I psaA/psaB protein;
Pssm-ID: 459719
Cd Length: 719
Bit Score: 1256.60
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 32 FS RTI A K GP D TT T WIWNLHA D AHDF D SH TS D L EE I SRK V FSAHFG Q L S IIFLWLSG MY FHGA R FSN Y EAWL S DP T H IG P S 111
Cdd:pfam00223 1 FS QDL A Q GP K TT R WIWNLHA T AHDF E SH DG D T EE L SRK I FSAHFG H L A IIFLWLSG NL FHGA W FSN F EAWL A DP L H VK P I 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 112 A Q VVWP IV GQEILN G -- DVG G GF R G I QITSG F FQ L WR AS G I T SEL QLY CT AIG A L VF AALMLFAGW F HYHK A APKL A WF Q 189
Cdd:pfam00223 81 A H VVWP HF GQEILN A ft DVG A GF P G V QITSG L FQ W WR TI G M T TNG QLY AG AIG L L IL AALMLFAGW L HYHK F APKL E WF K 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 190 DV ESMLNHHLAGL L GLGSL S W A GH QV HV SL P INQF L N AGV DPKE IPLPH E F i LN R DL LA QLYPSFA E G AT PFFT L NW SK Y 269
Cdd:pfam00223 161 NA ESMLNHHLAGL F GLGSL A W T GH LI HV AI P ESRL L D AGV AAAD IPLPH P F - LN P DL MG QLYPSFA A G LG PFFT G NW GA Y 239
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 270 AD F LTF R GGL D P V TG G LWLTDIAHHHLAIA I LF L IAGHMYRTN W GIGH GL K D ILEAHKGP -- FTG Q GHKGLYE I L TT SWH 347
Cdd:pfam00223 240 AD I LTF K GGL H P Q TG S LWLTDIAHHHLAIA V LF I IAGHMYRTN F GIGH SM K E ILEAHKGP gg FTG E GHKGLYE T L NN SWH 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 348 AQL S LNLAMLGS L TI V VAHHMY SM PPYPY L ATDY G TQ LS LFTHH M WIGGFL I VGA A AH A AIFMVRDYDP TTRY N DL LDRV 427
Cdd:pfam00223 320 AQL G LNLAMLGS V TI I VAHHMY AL PPYPY I ATDY T TQ AA LFTHH Q WIGGFL M VGA F AH G AIFMVRDYDP EVNK N NV LDRV 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 428 L R HRDAIISHL N W A C I FLGFH S FGLY I HNDTM S A L GRP Q DMFSDTAI Q L Q PVFAQWIQ ---------- N TH A L APG A TAP 497
Cdd:pfam00223 400 L E HRDAIISHL S W V C L FLGFH T FGLY V HNDTM R A F GRP E DMFSDTAI L L E PVFAQWIQ aahgkalygf N LL A S APG S TAP 479
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 498 G A T A ST S LT W GG GD L V A VGGKV A L L PIPLGTADFLVHHI H AF T IHVTVLILLKGVL F ARSSRL I PDK AN LGFRFPCDGPG 577
Cdd:pfam00223 480 N A G A GV S DV W LP GD A V N VGGKV S L F PIPLGTADFLVHHI I AF G IHVTVLILLKGVL D ARSSRL M PDK KD LGFRFPCDGPG 559
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 578 RGGTCQ V SAWDHVFLGLFWMYN S IS V VIF H F S WKMQSDVWG SVS dqgvvth ITGG N FAQSSI T INGWLRDFLWAQ A SQVI 657
Cdd:pfam00223 560 RGGTCQ I SAWDHVFLGLFWMYN T IS W VIF Y F H WKMQSDVWG GNV ------- ITGG Q FAQSSI Y INGWLRDFLWAQ S SQVI 632
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 658 Q SYG S SLS A YGL F FLG A HFVWAFSLMFLFSGRGYWQELIESIVWAHNKLK V AP AT QPRALSI I QGRAVGV T H Y LLGGI A T 737
Cdd:pfam00223 633 N SYG N SLS V YGL M FLG G HFVWAFSLMFLFSGRGYWQELIESIVWAHNKLK L AP LI QPRALSI V QGRAVGV A H F LLGGI V T 712
....*..
gi 2392240573 738 TWAFF L A 744
Cdd:pfam00223 713 TWAFF I A 719
psaB
CHL00054 photosystem I P700 chlorophyll a apoprotein A2
32-744
0e+00
photosystem I P700 chlorophyll a apoprotein A2
Pssm-ID: 176995
Cd Length: 734
Bit Score: 664.11
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 32 FS RTI A KG P d TT TW IW NLH A D AHDF D SH TSDL EE - ISR K V F SA HFGQL S IIFLW L SG MY FH G A RFS N Y EAW LS DP T H IG P 110
Cdd:CHL00054 8 FS QGL A QD P - TT RR IW FGI A T AHDF E SH DDIT EE r LYQ K I F AS HFGQL A IIFLW T SG NL FH V A WQG N F EAW VQ DP L H VR P 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 111 S A QVV W - P IV GQ EILNGDVG GG FR G - IQ I - T SG FF Q L W RAS G ITSELQ LY CT A IGA L VFA AL M L F AGW F H YH - K AA P KLA 186
Cdd:CHL00054 87 I A HAI W d P HF GQ PAVEAFTR GG AL G p VN I a Y SG VY Q W W YTI G LRTNED LY TG A LFL L FLS AL S L I AGW L H LQ p K WK P SVS 166
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 187 WF QDV ES M LNHHL A GL L G LG SL S W A GH Q VHV SL P INQFLNAGVDPKEIP LPH efilnrdllaqlypsf AE G AT P F FT LN W 266
Cdd:CHL00054 167 WF KNA ES R LNHHL S GL F G VS SL A W T GH L VHV AI P ESRGEHVRWNNFLDV LPH ---------------- PQ G LG P L FT GQ W 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 267 SK YA D ------------------ F LTF R GG LD P V T GG LWLTDIAHHHLAIA IL FLIAGHMYRTN W GIGH GL KDILEAH KG 328
Cdd:CHL00054 231 NL YA Q npdssshlfgtsqgagta I LTF L GG FH P Q T QS LWLTDIAHHHLAIA VV FLIAGHMYRTN F GIGH SM KDILEAH IP 310
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 329 P -- FT G Q GHKGLY EILTT S W H A QL S L N LA M LG SL T IV VA H HMYS M P P Y PYL A T D YG TQ LS L F THH MW I G GF LIV GA A AH A 406
Cdd:CHL00054 311 P gg RL G R GHKGLY DTINN S L H F QL G L A LA S LG VI T SL VA Q HMYS L P A Y AFI A Q D FT TQ AA L Y THH QY I A GF IMT GA F AH G 390
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 407 AIF MV RDY D P TTRYNDL L D R V L R H RD AIISHL N WA CI FLGFH SF GLY I HND T M S A L G R P QDM fsdta I QLQ P V FAQWIQ N 486
Cdd:CHL00054 391 AIF FI RDY N P EQNEDNV L A R M L D H KE AIISHL S WA SL FLGFH TL GLY V HND V M L A F G T P EKQ ----- I LIE P I FAQWIQ S 465
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 487 T H A -------- L APGATA P GAT A ST S L t W GG G D L V A VGGKVAL L PIPL G TA DFLVHH IH A FTI H V T V LIL L KG V L F AR S S 558
Cdd:CHL00054 466 A H G ktsygfdv L LSSTNS P AFN A GR S I - W LP G W L N A INENSNS L FLTI G PG DFLVHH AI A LGL H T T T LIL V KG A L D AR G S 544
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 559 R L I PDK ANL G FR FPCDGPGRGGTC QV SAWD HVF L GL FWM Y N S I SV V I F HFS WK MQS d V W gsvsd QG V V thitg GN F AQ SS 638
Cdd:CHL00054 545 K L M PDK KDF G YS FPCDGPGRGGTC DI SAWD AFY L AV FWM L N T I GW V T F YWH WK HIT - L W ----- QG N V ----- SQ F NE SS 613
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 639 ITIN GWLRD F LW AQA SQ V I QS Y G ---- S SLS AYGLF FL GA H F VWA FSL MFL F S G RGYWQELIE SIV WAH NKLKV A PATQ - 713
Cdd:CHL00054 614 TYLM GWLRD Y LW LNS SQ L I NG Y N pfgm N SLS VWAWM FL FG H L VWA TGF MFL I S W RGYWQELIE TLA WAH ERTPL A NLIR w 693
730 740 750
....*....|....*....|....*....|....
gi 2392240573 714 --- P R ALSI I Q G R A VG VT H YLL G G I A T TW AF FL A 744
Cdd:CHL00054 694 rdk P V ALSI V Q A R L VG LA H FSV G Y I F T YA AF LI A 727
PsaB
COG5702 Photosystem I reaction center subunit A2, PsaB [Energy production and conversion]; Photosystem ...
32-744
0e+00
Photosystem I reaction center subunit A2, PsaB [Energy production and conversion]; Photosystem I reaction center subunit A2, PsaB is part of the Pathway/BioSystem: Photosystem I
Pssm-ID: 444412
Cd Length: 741
Bit Score: 640.39
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 32 FS RTI A KG P d TT TW IW NLH A D AHDF D SH TSDL EE - ISR K V F SA HFG Q L S IIFLW L SG MY FH G A RFS N Y E A W LS DP THIG P 110
Cdd:COG5702 8 FS QDL A QD P - TT RR IW YGI A T AHDF E SH DGMT EE n LYQ K I F AT HFG H L A IIFLW S SG NL FH V A WQG N F E Q W IQ DP LNVR P 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 111 S A QVV W - P IV G QEILNG - DVG G GFRGIQ I T - SG FFQL W RAS G ITSELQ LY CTA I GA L VF AA L MLFAGW F H YH - K AA P K LA 186
Cdd:COG5702 87 I A HAI W d P HF G KPAIEA f TQA G ASNPVN I C y SG LYHW W YTI G MRTNTD LY QGS I FL L LL AA V MLFAGW L H LQ p K FR P S LA 166
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 187 WF QDV ES M LNHHLAGL L G LG SL S W A GH Q VHV SL P INQFLNA G V D PKEIP LPH efilnrdllaqlypsf AE G AT PFFT L NW 266
Cdd:COG5702 167 WF KNA ES R LNHHLAGL F G VS SL A W T GH L VHV AI P ESRGQHV G W D NFLST LPH ---------------- PA G LA PFFT G NW 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 267 SK YA D ------------------ F LTF R GG LD P V T GG LWLTDIAHHHLAIA IL F L IAGHMYRTN W GIGH GL K D ILEAH K G 328
Cdd:COG5702 231 GV YA Q npdtaghafgtsqgagta I LTF L GG FH P Q T ES LWLTDIAHHHLAIA VI F I IAGHMYRTN F GIGH SI K E ILEAH Q G 310
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 329 P ------ F TG Q GHKGLY EILTT S W H A QL S L N LA M LG SL T IV VA H HMY SM PPY PYL A T DY G TQ LS L F THH MW I G GFL IV GA 402
Cdd:COG5702 311 P grsgff K TG L GHKGLY DTINN S L H F QL G L A LA C LG VI T SL VA Q HMY AL PPY AFI A Q DY T TQ AA L Y THH QY I A GFL MI GA 390
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 403 A AH A AIF M VRDYDP TTRYNDL L D R V L R H RD AIISHL N W ACI FLGFH SF GLY I HND TMS A L G R P QDM fsdta I QLQ PVFAQ 482
Cdd:COG5702 391 F AH G AIF F VRDYDP EANKDNV L A R M L E H KE AIISHL S W VSL FLGFH TL GLY V HND VVV A F G T P EKQ ----- I LIE PVFAQ 465
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 483 W IQ NT H ALA ---------- P GAT A PG A TASTSLT W GG G D L V AV GGKVAL L PIPL G TA DFLVHH IH A FTI H V T V LIL L KG V 552
Cdd:COG5702 466 F IQ AA H GKV lygidtllsn P DSV A ST A WPNYGNV W LP G W L E AV NNGANS L FLTI G PG DFLVHH AI A LGL H T T T LIL V KG A 545
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 553 L F AR S S R L I PDK ANL G FR FPCDGPGRGGTC QV SAWD HVF L GL FWM Y N S I SV V I F HFS WK MQ S d V W GSVSD Q gvvthitgg 632
Cdd:COG5702 546 L D AR G S K L M PDK KDF G YA FPCDGPGRGGTC DI SAWD SFY L AT FWM L N T I GW V T F YWH WK HL S - I W SGNVA Q --------- 615
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392240573 633 n F AQ SS ITIN GW L RD F LWA QAS Q V I QS Y G ---- S SLS AYGLF FL GA H F VWA FSL MFL F S G RGYWQELIE SI VWAH NKLKV 708
Cdd:COG5702 616 - F NE SS TYLM GW F RD Y LWA NSA Q L I NG Y S pfgt N SLS VWAWM FL FG H L VWA TGF MFL I S W RGYWQELIE TL VWAH ERTPL 694
730 740 750 760
....*....|....*....|....*....|....*....|
gi 2392240573 709 A ---- PATQ P R ALSI I Q G R A VG V TH YLL G G I A T TW AF FL A 744
Cdd:COG5702 695 A nlvr WKDK P V ALSI V Q A R L VG L TH FTV G Y I V T YA AF LI A 734
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
