|
Name |
Accession |
Description |
Interval |
E-value |
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
1-160 |
1.10e-118 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 331.58 E-value: 1.10e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 1 MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWY 80
Cdd:CHL00058 1 MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 81 FFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 160
Cdd:CHL00058 81 FFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 160
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
1-159 |
1.61e-102 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 290.55 E-value: 1.61e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 1 MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWY 80
Cdd:TIGR01156 1 MSVTKKPDLSDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACVVGLAVLDPAMIGEPANPFATPLEILPEWY 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2392238568 81 FFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGL 159
Cdd:TIGR01156 81 FYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFRRPVATTVFLFGTVVALWLGIGATLPIDKSLTLGL 159
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
3-160 |
2.80e-91 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 262.42 E-value: 2.80e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 3 VTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFF 82
Cdd:COG5679 4 LLKKPDLTDPKLRAKLEKGMGHNYYGEPAWPNDLLYIFPVVILGTIALCIGLAVLDPAMMGEPADPFATPLEILPEWYLY 83
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2392238568 83 PVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 160
Cdd:COG5679 84 PVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQNPFRRPVATAVFLFGTLVTLWLGIGAALPIDKSLTLGLF 161
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
14-160 |
1.76e-59 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 181.30 E-value: 1.76e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 14 LRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPN 93
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2392238568 94 KLLGVLLMVSVPAGLLTVPFLENVNKF-QNPFRRPVATTVFLIGTAVALWLGIGATLpIDKSLTLGLF 160
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRsQFRPLRPTAFWVFLAGTLVLGWLGIQPVE-YPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
65-150 |
4.80e-17 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 71.74 E-value: 4.80e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENvNKFQNPFRRPVATTVFLIGTAVALWLG 144
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDR-SPVRSIRYRPLFKIFFWLFVVDFVVLG 79
|
....*.
gi 2392238568 145 IGATLP 150
Cdd:pfam00032 80 WLGKQP 85
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
1-160 |
1.10e-118 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 331.58 E-value: 1.10e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 1 MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWY 80
Cdd:CHL00058 1 MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 81 FFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 160
Cdd:CHL00058 81 FFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 160
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
1-159 |
1.61e-102 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 290.55 E-value: 1.61e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 1 MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWY 80
Cdd:TIGR01156 1 MSVTKKPDLSDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACVVGLAVLDPAMIGEPANPFATPLEILPEWY 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2392238568 81 FFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGL 159
Cdd:TIGR01156 81 FYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFRRPVATTVFLFGTVVALWLGIGATLPIDKSLTLGL 159
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
3-160 |
2.80e-91 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 262.42 E-value: 2.80e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 3 VTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFF 82
Cdd:COG5679 4 LLKKPDLTDPKLRAKLEKGMGHNYYGEPAWPNDLLYIFPVVILGTIALCIGLAVLDPAMMGEPADPFATPLEILPEWYLY 83
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2392238568 83 PVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 160
Cdd:COG5679 84 PVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQNPFRRPVATAVFLFGTLVTLWLGIGAALPIDKSLTLGLF 161
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
14-160 |
1.76e-59 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 181.30 E-value: 1.76e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 14 LRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPN 93
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2392238568 94 KLLGVLLMVSVPAGLLTVPFLENVNKF-QNPFRRPVATTVFLIGTAVALWLGIGATLpIDKSLTLGLF 160
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRsQFRPLRPTAFWVFLAGTLVLGWLGIQPVE-YPFSLILQLF 147
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
28-151 |
5.29e-20 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 84.84 E-value: 5.29e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 28 GEPAWPNDLLY--IFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVP--NKLLGVLLMVS 103
Cdd:COG1290 233 GVPFHPYYTVKdgFGFFVFLGVFALLAFFFPINPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGL 312
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 2392238568 104 VPAGLLTVPFLENvNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPI 151
Cdd:COG1290 313 AILVLFLLPFLDR-SPVRSPRYRPVRTALGVAFIVFFIVLTILGANPP 359
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
65-150 |
4.80e-17 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 71.74 E-value: 4.80e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENvNKFQNPFRRPVATTVFLIGTAVALWLG 144
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDR-SPVRSIRYRPLFKIFFWLFVVDFVVLG 79
|
....*.
gi 2392238568 145 IGATLP 150
Cdd:pfam00032 80 WLGKQP 85
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
53-143 |
3.89e-14 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 68.55 E-value: 3.89e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 53 GLAVLEPSMIGE-----PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLeNVNKFQNPFRRP 127
Cdd:MTH00016 242 SVVLLWPNILGDpenfiPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFI-FKQKFRGLSFYP 320
|
90
....*....|....*.
gi 2392238568 128 VATTVFLIGTAVALWL 143
Cdd:MTH00016 321 LNQILFWLLVSNFLLL 336
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
54-144 |
2.73e-13 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 66.08 E-value: 2.73e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 54 LAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFrRPV 128
Cdd:MTH00119 243 LALFSPNLLGDPenftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTF-RPL 321
|
90
....*....|....*....
gi 2392238568 129 ATTVF--LIGTAVAL-WLG 144
Cdd:MTH00119 322 SQLLFwtLVANLLILtWIG 340
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
54-144 |
3.81e-13 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 65.50 E-value: 3.81e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 54 LAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFrRPV 128
Cdd:MTH00034 242 LALLFPTALNDPenfipANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTF-RPL 320
|
90
....*....|....*....
gi 2392238568 129 ATTVF--LIGTAVAL-WLG 144
Cdd:MTH00034 321 SQIAFwlLIATFFILtWIG 339
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
54-144 |
7.88e-13 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 64.66 E-value: 7.88e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 54 LAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLeNVNKFQNPFRRPV 128
Cdd:MTH00100 242 LVLFSPDLLGDPdnytpANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLL-HTSKQRSMMFRPL 320
|
90
....*....|....*....
gi 2392238568 129 ATTVFLIGTAVAL---WLG 144
Cdd:MTH00100 321 SQCLFWLLVADLLtltWIG 339
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
54-144 |
2.05e-12 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 63.40 E-value: 2.05e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 54 LAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFrRPV 128
Cdd:MTH00191 239 LVLFSPNLLGDPenfipANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTF-RPL 317
|
90
....*....|....*....
gi 2392238568 129 ATTVFLIGTAVAL---WLG 144
Cdd:MTH00191 318 TQVVFWLWVANFIlltWLG 336
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
52-144 |
2.21e-12 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 63.39 E-value: 2.21e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 52 VGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLeNVNKFQNPFRR 126
Cdd:MTH00145 241 VFLVLFFPNLLGDPenfipANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLL-HVGKFRSLSFY 319
|
90 100
....*....|....*....|.
gi 2392238568 127 PVATTVF--LIGTAVAL-WLG 144
Cdd:MTH00145 320 PLNQVLFwiFVGNFFILtWIG 340
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
54-144 |
2.86e-11 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 60.05 E-value: 2.86e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 54 LAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFrRPV 128
Cdd:MTH00131 242 LALFSPNLLGDPdnftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTF-RPL 320
|
90
....*....|....*....
gi 2392238568 129 ATTVF--LIGTAVAL-WLG 144
Cdd:MTH00131 321 TQFLFwtLVADVLILtWIG 339
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
54-144 |
1.01e-10 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 58.54 E-value: 1.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 54 LAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFrRPV 128
Cdd:MTH00074 243 LSLFSPNLLGDPdnftpANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMF-RPL 321
|
90
....*....|....*....
gi 2392238568 129 ATTVF---LIGTAVALWLG 144
Cdd:MTH00074 322 TQILFwllVANTLILTWIG 340
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
10-133 |
1.01e-10 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 58.56 E-value: 1.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 10 NDPV-LRAKLAKGMGHNYYGEPAWpndllyiFPVVILGTIACnvGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFP 83
Cdd:MTH00022 205 NNPIgLNSSVDKVSFHVYYTSKDW-------YGIVVLFFLLS--FIVYFAPNLLGDPenfiqANSLVTPVHIQPEWYFLF 275
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 2392238568 84 VFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENvNKFQNPFRRPVATTVF 133
Cdd:MTH00022 276 AYAILRSIPNKLGGVVAMFFSILILFFLPLLHT-SWLRGLTFRPLGRMAF 324
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
39-144 |
2.58e-10 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 57.41 E-value: 2.58e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 39 IFPVVILGTIACNvgLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPF 113
Cdd:MTH00053 230 LYGAVILLIILSI--IVFLFPYSLGDAenfkqANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPY 307
|
90 100 110
....*....|....*....|....*....|....
gi 2392238568 114 LENvNKFQNPFRRPVATTVF--LIGTAVAL-WLG 144
Cdd:MTH00053 308 LHK-SRFRGLSFRPLSKILFwfLVGDFFLLtWIG 340
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
65-122 |
2.72e-10 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 57.48 E-value: 2.72e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 2392238568 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLeNVNKFQN 122
Cdd:MTH00156 248 PANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFT-NKSKFRG 304
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
54-144 |
2.87e-10 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 57.24 E-value: 2.87e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 54 LAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFrRPV 128
Cdd:MTH00224 243 MVLFEPNLFTDPenflmANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPF-YPL 321
|
90
....*....|....*....
gi 2392238568 129 ATTVFLI---GTAVALWLG 144
Cdd:MTH00224 322 NQLLFWLlvtSWAILTWIG 340
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
32-144 |
1.23e-08 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 52.63 E-value: 1.23e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2392238568 32 WPNDLLYIFPVVILgtiacnVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPA 106
Cdd:MTH00086 214 WNKDAYNIIFWLVF------IIFSLFYPFNLGDPemfieADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIV 287
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 2392238568 107 GLLTVPFLEN-------VNKFQNpfrrpvatTVFLIGTAVALWLG 144
Cdd:MTH00086 288 VFYFFIFVNNytsclnkLNKFLV--------FSFIVVNVILSWLG 324
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
66-115 |
8.67e-07 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 47.24 E-value: 8.67e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 2392238568 66 ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLE 115
Cdd:MTH00033 258 ANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILD 307
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
66-103 |
3.35e-05 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 42.66 E-value: 3.35e-05
10 20 30
....*....|....*....|....*....|....*...
gi 2392238568 66 ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVS 103
Cdd:MTH00046 251 ADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLVLVLS 288
|
|
| |
