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Conserved domains on  [gi|1780597630|emb|VYS52544|]
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unnamed protein product [Arabidopsis thaliana]

Protein Classification

SAUR-like auxin-responsive family protein( domain architecture ID 10010991)

SAUR-like auxin-responsive family protein similar to Arabidopsis thaliana SAUR50, which is an effector of hormonal and environmental signals in plant growth

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN03090 PLN03090
auxin-responsive family protein; Provisional
 2-108 1.60e-71

auxin-responsive family protein; Provisional


:

Pssm-ID: 178639  Cd Length: 104  Bit Score: 208.08  E-value: 1.60e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1780597630   2 SILKKSTKLAQTAMLRQILKRCSSLGKKNGgggYEEVDLPLDVPKGHFPVYVGHNRSRYIVPISFLTNLDFQCLLRRAEE 81
Cdd:PLN03090    1 MAIKKSNKLTQTAMLKQILKRCSSLGKKQG---YDEDGLPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQQAEE 77

                          90       100
                  ....*....|....*....|....*..
gi 1780597630  82 EFGFDHDMGLTIPCDELFFQDLTSMIR 108
Cdd:PLN03090   78 EFGFDHDMGLTIPCEEVVFRSLTSMIR 104
 
Name Accession Description Interval E-value
PLN03090 PLN03090
auxin-responsive family protein; Provisional
 2-108 1.60e-71

auxin-responsive family protein; Provisional


Pssm-ID: 178639  Cd Length: 104  Bit Score: 208.08  E-value: 1.60e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1780597630   2 SILKKSTKLAQTAMLRQILKRCSSLGKKNGgggYEEVDLPLDVPKGHFPVYVGHNRSRYIVPISFLTNLDFQCLLRRAEE 81
Cdd:PLN03090    1 MAIKKSNKLTQTAMLKQILKRCSSLGKKQG---YDEDGLPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQQAEE 77

                          90       100
                  ....*....|....*....|....*..
gi 1780597630  82 EFGFDHDMGLTIPCDELFFQDLTSMIR 108
Cdd:PLN03090   78 EFGFDHDMGLTIPCEEVVFRSLTSMIR 104
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 16-105 1.92e-30

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


Pssm-ID: 460580  Cd Length: 92  Bit Score: 103.87  E-value: 1.92e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1780597630  16 LRQILKRCSSLG-KKNGGGGYEEVDLPLDVP-KGHFPVYVGHNRSRYIVPISFLTNLDFQCLLRRAEEEFGFDHDMGLTI 93
Cdd:pfam02519   1 LKQMARKWQKRAaLGRKRISSPRTTSSSDVPeKGHFVVYVGDERRRFVVPLEYLNHPLFRELLRMSEEEFGFPSDGPITL 80

                          90
                  ....*....|..
gi 1780597630  94 PCDELFFQDLTS 105
Cdd:pfam02519  81 PCDVVVFEYLLS 92
 
Name Accession Description Interval E-value
PLN03090 PLN03090
auxin-responsive family protein; Provisional
 2-108 1.60e-71

auxin-responsive family protein; Provisional


Pssm-ID: 178639  Cd Length: 104  Bit Score: 208.08  E-value: 1.60e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1780597630   2 SILKKSTKLAQTAMLRQILKRCSSLGKKNGgggYEEVDLPLDVPKGHFPVYVGHNRSRYIVPISFLTNLDFQCLLRRAEE 81
Cdd:PLN03090    1 MAIKKSNKLTQTAMLKQILKRCSSLGKKQG---YDEDGLPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQQAEE 77

                          90       100
                  ....*....|....*....|....*..
gi 1780597630  82 EFGFDHDMGLTIPCDELFFQDLTSMIR 108
Cdd:PLN03090   78 EFGFDHDMGLTIPCEEVVFRSLTSMIR 104
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 16-105 1.92e-30

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


Pssm-ID: 460580  Cd Length: 92  Bit Score: 103.87  E-value: 1.92e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1780597630  16 LRQILKRCSSLG-KKNGGGGYEEVDLPLDVP-KGHFPVYVGHNRSRYIVPISFLTNLDFQCLLRRAEEEFGFDHDMGLTI 93
Cdd:pfam02519   1 LKQMARKWQKRAaLGRKRISSPRTTSSSDVPeKGHFVVYVGDERRRFVVPLEYLNHPLFRELLRMSEEEFGFPSDGPITL 80

                          90
                  ....*....|..
gi 1780597630  94 PCDELFFQDLTS 105
Cdd:pfam02519  81 PCDVVVFEYLLS 92
PLN03220 PLN03220
uncharacterized protein; Provisional
 8-105 6.44e-20

uncharacterized protein; Provisional


Pssm-ID: 178759  Cd Length: 105  Bit Score: 77.48  E-value: 6.44e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1780597630   8 TKLAQTAMLRQILKrCSSLGKKNGGGGYEEVDlpldVPKGHFPVYVGHN----RSRYIVPISFLTNLDFQCLLRRAEEEF 83
Cdd:PLN03220    4 SRFAISNATKQILK-LNSLANRNRTSSSSSDH----VPKGHVAVYVGEQiemeKKRFVVPISFLNHPSFKEFLSRAEEEF 78

                          90       100
                  ....*....|....*....|...
gi 1780597630  84 GFDHDM-GLTIPCDELFFQDLTS 105
Cdd:PLN03220   79 GFNHPMgGLTIPCREEVFLDLIA 101
PLN03219 PLN03219
uncharacterized protein; Provisional
 17-105 6.55e-16

uncharacterized protein; Provisional


Pssm-ID: 178758 [Multi-domain]  Cd Length: 108  Bit Score: 67.47  E-value: 6.55e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1780597630  17 RQILKRcSSLGKKNGGGGYEEVDLPLD-VPKGHFPVYVGHN--RSRYIVPISFLTNLDFQCLLRRAEEEFGFDHDM-GLT 92
Cdd:PLN03219   12 KQIFKS-QSMRNKNGSSSPSSSTTTSGlVPKGHVAVYVGEQmeKKRFVVPISYLNHPLFREFLNRAEEECGFHHSMgGLT 90

                          90
                  ....*....|....
gi 1780597630  93 IPC-DELFFQDLTS 105
Cdd:PLN03219   91 IPCrEESFLHLITS 104
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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