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Conserved domains on  [gi|2321362391|gb|UYP77444|]
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CopL family metal-binding regulatory protein [Xanthomonas campestris pv. campestris]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CopL_fam NF033807
CopL family metal-binding regulatory protein; The founding member of this family was shown to ...
 15-140 5.41e-19

CopL family metal-binding regulatory protein; The founding member of this family was shown to be involved in the copper-responsive expression of a multicopper oxidase copA encoded downstream. The regulatory function likely involves copper-binding, but activity as a DNA-binding transcriptional regulator was not demonstrated directly.


:

Pssm-ID: 468190 [Multi-domain]  Cd Length: 129  Bit Score: 76.99  E-value: 5.41e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362391  15 VANTATGAWASVGMAMPAMGSAAmgsaamaaTAHGTYAAAPDALPCHEDMASPAAMPQPDTDHAAHAGkgDCCKLGSCD- 93
Cdd:NF033807   12 VLNGAGGAWASVRMAMPHMAAAA--------AAAAAAAAAAAAAPCHGDAPAAAAAAPPAADHDPHAD--DCCKSGSCDc 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2321362391  94 -CLQHCSLALLTLPAVPAALAGRPAMPGALAEGRANPVPEQPVRPPIA 140
Cdd:NF033807   82 aCAQHCSAALPTLPALPAHLPGSLAVAAPLLSGHPSPALPHLFRPPIG 129
 
Name Accession Description Interval E-value
CopL_fam NF033807
CopL family metal-binding regulatory protein; The founding member of this family was shown to ...
 15-140 5.41e-19

CopL family metal-binding regulatory protein; The founding member of this family was shown to be involved in the copper-responsive expression of a multicopper oxidase copA encoded downstream. The regulatory function likely involves copper-binding, but activity as a DNA-binding transcriptional regulator was not demonstrated directly.


Pssm-ID: 468190 [Multi-domain]  Cd Length: 129  Bit Score: 76.99  E-value: 5.41e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362391  15 VANTATGAWASVGMAMPAMGSAAmgsaamaaTAHGTYAAAPDALPCHEDMASPAAMPQPDTDHAAHAGkgDCCKLGSCD- 93
Cdd:NF033807   12 VLNGAGGAWASVRMAMPHMAAAA--------AAAAAAAAAAAAAPCHGDAPAAAAAAPPAADHDPHAD--DCCKSGSCDc 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2321362391  94 -CLQHCSLALLTLPAVPAALAGRPAMPGALAEGRANPVPEQPVRPPIA 140
Cdd:NF033807   82 aCAQHCSAALPTLPALPAHLPGSLAVAAPLLSGHPSPALPHLFRPPIG 129
 
Name Accession Description Interval E-value
CopL_fam NF033807
CopL family metal-binding regulatory protein; The founding member of this family was shown to ...
 15-140 5.41e-19

CopL family metal-binding regulatory protein; The founding member of this family was shown to be involved in the copper-responsive expression of a multicopper oxidase copA encoded downstream. The regulatory function likely involves copper-binding, but activity as a DNA-binding transcriptional regulator was not demonstrated directly.


Pssm-ID: 468190 [Multi-domain]  Cd Length: 129  Bit Score: 76.99  E-value: 5.41e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362391  15 VANTATGAWASVGMAMPAMGSAAmgsaamaaTAHGTYAAAPDALPCHEDMASPAAMPQPDTDHAAHAGkgDCCKLGSCD- 93
Cdd:NF033807   12 VLNGAGGAWASVRMAMPHMAAAA--------AAAAAAAAAAAAAPCHGDAPAAAAAAPPAADHDPHAD--DCCKSGSCDc 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2321362391  94 -CLQHCSLALLTLPAVPAALAGRPAMPGALAEGRANPVPEQPVRPPIA 140
Cdd:NF033807   82 aCAQHCSAALPTLPALPAHLPGSLAVAAPLLSGHPSPALPHLFRPPIG 129
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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