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Conserved domains on  [gi|2321362390|gb|UYP77443|]
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PLP-dependent cysteine synthase family protein [Xanthomonas campestris pv. campestris]

Protein Classification

PLP-dependent cysteine synthase family protein( domain architecture ID 10000483)

cysteine synthase family protein is a pyridoxal 5'-phosphate (PLP)-dependent enzyme similar to Helicobacter pylori cysteine synthase

CATH:  3.40.50.1100
Gene Ontology:  GO:0030170
SCOP:  4000798

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CysK COG0031
Cysteine synthase [Amino acid transport and metabolism]; Cysteine synthase is part of the ...
23-325 2.66e-111

Cysteine synthase [Amino acid transport and metabolism]; Cysteine synthase is part of the Pathway/BioSystem: Cysteine biosynthesis


:

Pssm-ID: 439802 [Multi-domain]  Cd Length: 301  Bit Score: 326.62  E-value: 2.66e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  23 DTHLIPMD-LPGYPGIDLYFKDESSHPTGSLKHRLARSLFLYALANGWLREGRPVIEASSGSTAVSEAYFARLLGVPFIA 101
Cdd:COG0031    13 NTPLVRLNrLSPGPGAEIYAKLESFNPGGSVKDRIALSMIEDAEKRGLLKPGGTIVEATSGNTGIGLAMVAAAKGYRLIL 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 102 VMPASTSPEKIAAIAFQGGRCHLVERACDLDSA---SHQLARET-GGHFMDQFTYAERATDWRanNNIAESIFKQLSEEP 177
Cdd:COG0031    93 VMPETMSKERRALLRAYGAEVVLTPGAEGMKGAidkAEELAAETpGAFWPNQFENPANPEAHY--ETTGPEIWEQTDGKV 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 178 HpipeWIVCSPGTGGTSATLGRYVRYRRHDTRILCADPEVSVFFDGycravdgqcpkelAITGGSRIEGIGRPRVESSFI 257
Cdd:COG0031   171 D----AFVAGVGTGGTITGVGRYLKERNPDIKIVAVEPEGSPLLSG-------------GEPGPHKIEGIGAGFVPKILD 233
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2321362390 258 ASCVDVMIKVPDALSLAAMRHVSATLGKRVGGSTGTNFVGVLQAAQRMrdeGRQGSIVTILCDAGERY 325
Cdd:COG0031   234 PSLIDEVITVSDEEAFAMARRLAREEGILVGISSGAAVAAALRLAKRL---GPGKTIVTILPDSGERY 298
 
Name Accession Description Interval E-value
CysK COG0031
Cysteine synthase [Amino acid transport and metabolism]; Cysteine synthase is part of the ...
23-325 2.66e-111

Cysteine synthase [Amino acid transport and metabolism]; Cysteine synthase is part of the Pathway/BioSystem: Cysteine biosynthesis


Pssm-ID: 439802 [Multi-domain]  Cd Length: 301  Bit Score: 326.62  E-value: 2.66e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  23 DTHLIPMD-LPGYPGIDLYFKDESSHPTGSLKHRLARSLFLYALANGWLREGRPVIEASSGSTAVSEAYFARLLGVPFIA 101
Cdd:COG0031    13 NTPLVRLNrLSPGPGAEIYAKLESFNPGGSVKDRIALSMIEDAEKRGLLKPGGTIVEATSGNTGIGLAMVAAAKGYRLIL 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 102 VMPASTSPEKIAAIAFQGGRCHLVERACDLDSA---SHQLARET-GGHFMDQFTYAERATDWRanNNIAESIFKQLSEEP 177
Cdd:COG0031    93 VMPETMSKERRALLRAYGAEVVLTPGAEGMKGAidkAEELAAETpGAFWPNQFENPANPEAHY--ETTGPEIWEQTDGKV 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 178 HpipeWIVCSPGTGGTSATLGRYVRYRRHDTRILCADPEVSVFFDGycravdgqcpkelAITGGSRIEGIGRPRVESSFI 257
Cdd:COG0031   171 D----AFVAGVGTGGTITGVGRYLKERNPDIKIVAVEPEGSPLLSG-------------GEPGPHKIEGIGAGFVPKILD 233
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2321362390 258 ASCVDVMIKVPDALSLAAMRHVSATLGKRVGGSTGTNFVGVLQAAQRMrdeGRQGSIVTILCDAGERY 325
Cdd:COG0031   234 PSLIDEVITVSDEEAFAMARRLAREEGILVGISSGAAVAAALRLAKRL---GPGKTIVTILPDSGERY 298
CBS_like cd01561
CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS ...
35-325 7.19e-53

CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.


Pssm-ID: 107204 [Multi-domain]  Cd Length: 291  Bit Score: 176.55  E-value: 7.19e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  35 PGIDLYFKDESSHPTGSLKHRLARSLFLYALANGWLREGRPVIEASSGSTAVSEAYFARLLGVPFIAVMPASTSPEKIAA 114
Cdd:cd01561    15 TGAEIYAKLEFFNPGGSVKDRIALYMIEDAEKRGLLKPGTTIIEPTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKL 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 115 IAFQGGRCHLVERACDLDSASH-----QLARETGGHFM-DQFtyaERATDWRAN-NNIAESIFKQLSEEphpiPEWIVCS 187
Cdd:cd01561    95 LRALGAEVILTPEAEADGMKGAiakarELAAETPNAFWlNQF---ENPANPEAHyETTAPEIWEQLDGK----VDAFVAG 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 188 PGTGGTSATLGRYVRYRRHDTRILCADPEVSVFFDGycravdGQCpkelaitGGSRIEGIGRPRVESSFIASCVDVMIKV 267
Cdd:cd01561   168 VGTGGTITGVARYLKEKNPNVRIVGVDPVGSVLFSG------GPP-------GPHKIEGIGAGFIPENLDRSLIDEVVRV 234
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2321362390 268 PDALSLAAMRHVSATLGKRVGGSTGTNFVGVLQAAQRMRDEGRqgsIVTILCDAGERY 325
Cdd:cd01561   235 SDEEAFAMARRLAREEGLLVGGSSGAAVAAALKLAKRLGPGKT---IVTILPDSGERY 289
PALP pfam00291
Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate ...
31-320 1.94e-47

Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4.


Pssm-ID: 459749 [Multi-domain]  Cd Length: 295  Bit Score: 162.87  E-value: 1.94e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  31 LPGYPGIDLYFKDESSHPTGSLKHRLARSLfLYALANGwlREGRPVIEASSGSTAVSEAYFARLLGVPFIAVMPASTSPE 110
Cdd:pfam00291  16 LSKELGVDVYLKLESLNPTGSFKDRGALNL-LLRLKEG--EGGKTVVEASSGNHGRALAAAAARLGLKVTIVVPEDAPPG 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 111 KIAAIAFQGGRCHLVERacDLDSA---SHQLARE-TGGHFMDQFtyaERATDWRANNNIAESIFKQLSEEphpiPEWIVC 186
Cdd:pfam00291  93 KLLLMRALGAEVVLVGG--DYDEAvaaARELAAEgPGAYYINQY---DNPLNIEGYGTIGLEILEQLGGD----PDAVVV 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 187 SPGTGGTSATLGRYVRYRRHDTRILCADPEVSVFFDGYCRAVDGQCPKELaitgGSRIEGIGRPRVESSF----IASCVD 262
Cdd:pfam00291 164 PVGGGGLIAGIARGLKELGPDVRVIGVEPEGAPALARSLAAGRPVPVPVA----DTIADGLGVGDEPGALaldlLDEYVG 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2321362390 263 VMIKVPDALSLAAMRHVSATLGKRVGGSTGTNFVGV-LQAAQRMRDEGRqgsIVTILCD 320
Cdd:pfam00291 240 EVVTVSDEEALEAMRLLARREGIVVEPSSAAALAALkLALAGELKGGDR---VVVVLTG 295
PRK10717 PRK10717
cysteine synthase A; Provisional
36-342 8.08e-36

cysteine synthase A; Provisional


Pssm-ID: 182672 [Multi-domain]  Cd Length: 330  Bit Score: 133.06  E-value: 8.08e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  36 GIDLYFKDESSHPTGSLKHRLARSLFLYALANGWLREGRPVIEASSGSTAVSEAYFARLLGVPFIAVMPASTSPEKIAAI 115
Cdd:PRK10717   27 GCEILGKAEFLNPGGSVKDRAALNIIWDAEKRGLLKPGGTIVEGTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLL 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 116 AFQGGRCHLVERACDLDSA-----SHQLARET------GGHFMDQFtyaeratDWRANNNI-----AESIFKQLSEEphp 179
Cdd:PRK10717  107 RALGAELVLVPAAPYANPNnyvkgAGRLAEELvasepnGAIWANQF-------DNPANREAhyettGPEIWEQTDGK--- 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 180 IPEWiVCSPGTGGTSATLGRYVRYRRHDTRILCADPEVSVFfdgYCRAVDGqcpkELAITGGSRIEGIGRPRVESSFIAS 259
Cdd:PRK10717  177 VDGF-VCAVGTGGTLAGVSRYLKETNPKVKIVLADPTGSAL---YSYYKTG----ELKAEGSSITEGIGQGRITANLEGA 248
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 260 CVDVMIKVPDALSLAAMRHVSATLGKRVGGSTGTNFVGVLQAAqrmRDEGRQGSIVTILCDAGERYAHSYYDPAWYVARE 339
Cdd:PRK10717  249 PIDDAIRIPDEEALSTAYRLLEEEGLCLGGSSGINVAAALRLA---RELGPGHTIVTILCDSGERYQSKLFNPDFLREKG 325

                  ...
gi 2321362390 340 IDV 342
Cdd:PRK10717  326 LPV 328
 
Name Accession Description Interval E-value
CysK COG0031
Cysteine synthase [Amino acid transport and metabolism]; Cysteine synthase is part of the ...
23-325 2.66e-111

Cysteine synthase [Amino acid transport and metabolism]; Cysteine synthase is part of the Pathway/BioSystem: Cysteine biosynthesis


Pssm-ID: 439802 [Multi-domain]  Cd Length: 301  Bit Score: 326.62  E-value: 2.66e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  23 DTHLIPMD-LPGYPGIDLYFKDESSHPTGSLKHRLARSLFLYALANGWLREGRPVIEASSGSTAVSEAYFARLLGVPFIA 101
Cdd:COG0031    13 NTPLVRLNrLSPGPGAEIYAKLESFNPGGSVKDRIALSMIEDAEKRGLLKPGGTIVEATSGNTGIGLAMVAAAKGYRLIL 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 102 VMPASTSPEKIAAIAFQGGRCHLVERACDLDSA---SHQLARET-GGHFMDQFTYAERATDWRanNNIAESIFKQLSEEP 177
Cdd:COG0031    93 VMPETMSKERRALLRAYGAEVVLTPGAEGMKGAidkAEELAAETpGAFWPNQFENPANPEAHY--ETTGPEIWEQTDGKV 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 178 HpipeWIVCSPGTGGTSATLGRYVRYRRHDTRILCADPEVSVFFDGycravdgqcpkelAITGGSRIEGIGRPRVESSFI 257
Cdd:COG0031   171 D----AFVAGVGTGGTITGVGRYLKERNPDIKIVAVEPEGSPLLSG-------------GEPGPHKIEGIGAGFVPKILD 233
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2321362390 258 ASCVDVMIKVPDALSLAAMRHVSATLGKRVGGSTGTNFVGVLQAAQRMrdeGRQGSIVTILCDAGERY 325
Cdd:COG0031   234 PSLIDEVITVSDEEAFAMARRLAREEGILVGISSGAAVAAALRLAKRL---GPGKTIVTILPDSGERY 298
CBS_like cd01561
CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS ...
35-325 7.19e-53

CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.


Pssm-ID: 107204 [Multi-domain]  Cd Length: 291  Bit Score: 176.55  E-value: 7.19e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  35 PGIDLYFKDESSHPTGSLKHRLARSLFLYALANGWLREGRPVIEASSGSTAVSEAYFARLLGVPFIAVMPASTSPEKIAA 114
Cdd:cd01561    15 TGAEIYAKLEFFNPGGSVKDRIALYMIEDAEKRGLLKPGTTIIEPTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKL 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 115 IAFQGGRCHLVERACDLDSASH-----QLARETGGHFM-DQFtyaERATDWRAN-NNIAESIFKQLSEEphpiPEWIVCS 187
Cdd:cd01561    95 LRALGAEVILTPEAEADGMKGAiakarELAAETPNAFWlNQF---ENPANPEAHyETTAPEIWEQLDGK----VDAFVAG 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 188 PGTGGTSATLGRYVRYRRHDTRILCADPEVSVFFDGycravdGQCpkelaitGGSRIEGIGRPRVESSFIASCVDVMIKV 267
Cdd:cd01561   168 VGTGGTITGVARYLKEKNPNVRIVGVDPVGSVLFSG------GPP-------GPHKIEGIGAGFIPENLDRSLIDEVVRV 234
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2321362390 268 PDALSLAAMRHVSATLGKRVGGSTGTNFVGVLQAAQRMRDEGRqgsIVTILCDAGERY 325
Cdd:cd01561   235 SDEEAFAMARRLAREEGLLVGGSSGAAVAAALKLAKRLGPGKT---IVTILPDSGERY 289
PALP pfam00291
Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate ...
31-320 1.94e-47

Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4.


Pssm-ID: 459749 [Multi-domain]  Cd Length: 295  Bit Score: 162.87  E-value: 1.94e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  31 LPGYPGIDLYFKDESSHPTGSLKHRLARSLfLYALANGwlREGRPVIEASSGSTAVSEAYFARLLGVPFIAVMPASTSPE 110
Cdd:pfam00291  16 LSKELGVDVYLKLESLNPTGSFKDRGALNL-LLRLKEG--EGGKTVVEASSGNHGRALAAAAARLGLKVTIVVPEDAPPG 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 111 KIAAIAFQGGRCHLVERacDLDSA---SHQLARE-TGGHFMDQFtyaERATDWRANNNIAESIFKQLSEEphpiPEWIVC 186
Cdd:pfam00291  93 KLLLMRALGAEVVLVGG--DYDEAvaaARELAAEgPGAYYINQY---DNPLNIEGYGTIGLEILEQLGGD----PDAVVV 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 187 SPGTGGTSATLGRYVRYRRHDTRILCADPEVSVFFDGYCRAVDGQCPKELaitgGSRIEGIGRPRVESSF----IASCVD 262
Cdd:pfam00291 164 PVGGGGLIAGIARGLKELGPDVRVIGVEPEGAPALARSLAAGRPVPVPVA----DTIADGLGVGDEPGALaldlLDEYVG 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2321362390 263 VMIKVPDALSLAAMRHVSATLGKRVGGSTGTNFVGV-LQAAQRMRDEGRqgsIVTILCD 320
Cdd:pfam00291 240 EVVTVSDEEALEAMRLLARREGIVVEPSSAAALAALkLALAGELKGGDR---VVVVLTG 295
PRK10717 PRK10717
cysteine synthase A; Provisional
36-342 8.08e-36

cysteine synthase A; Provisional


Pssm-ID: 182672 [Multi-domain]  Cd Length: 330  Bit Score: 133.06  E-value: 8.08e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  36 GIDLYFKDESSHPTGSLKHRLARSLFLYALANGWLREGRPVIEASSGSTAVSEAYFARLLGVPFIAVMPASTSPEKIAAI 115
Cdd:PRK10717   27 GCEILGKAEFLNPGGSVKDRAALNIIWDAEKRGLLKPGGTIVEGTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLL 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 116 AFQGGRCHLVERACDLDSA-----SHQLARET------GGHFMDQFtyaeratDWRANNNI-----AESIFKQLSEEphp 179
Cdd:PRK10717  107 RALGAELVLVPAAPYANPNnyvkgAGRLAEELvasepnGAIWANQF-------DNPANREAhyettGPEIWEQTDGK--- 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 180 IPEWiVCSPGTGGTSATLGRYVRYRRHDTRILCADPEVSVFfdgYCRAVDGqcpkELAITGGSRIEGIGRPRVESSFIAS 259
Cdd:PRK10717  177 VDGF-VCAVGTGGTLAGVSRYLKETNPKVKIVLADPTGSAL---YSYYKTG----ELKAEGSSITEGIGQGRITANLEGA 248
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 260 CVDVMIKVPDALSLAAMRHVSATLGKRVGGSTGTNFVGVLQAAqrmRDEGRQGSIVTILCDAGERYAHSYYDPAWYVARE 339
Cdd:PRK10717  249 PIDDAIRIPDEEALSTAYRLLEEEGLCLGGSSGINVAAALRLA---RELGPGHTIVTILCDSGERYQSKLFNPDFLREKG 325

                  ...
gi 2321362390 340 IDV 342
Cdd:PRK10717  326 LPV 328
Trp-synth-beta_II cd00640
Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP) ...
24-320 7.55e-34

Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehyd catalyzes the conversion of L- or D-serine to pyruvate and ammonia. Thr-dehyd is active as a homodimer and catalyzes the conversion of L-threonine to 2-oxobutanoate and ammonia. DAL is also a homodimer and catalyzes the alpha, beta-elimination reaction of both L- and D-alpha, beta-diaminopropionate to form pyruvate and ammonia. Thr-synth catalyzes the formation of threonine and inorganic phosphate from O-phosphohomoserine.


Pssm-ID: 107202 [Multi-domain]  Cd Length: 244  Bit Score: 125.32  E-value: 7.55e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  24 THLIPMD-LPGYPGIDLYFKDESSHPTGSLKHRLARSLFLYALANGWLREGRpVIEASSGSTAVSEAYFARLLGVPFIAV 102
Cdd:cd00640     1 TPLVRLKrLSKLGGANIYLKLEFLNPTGSFKDRGALNLILLAEEEGKLPKGV-IIESTGGNTGIALAAAAARLGLKCTIV 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 103 MPASTSPEKIAAIAFQGGRCHLVERacDLDSA---SHQLARETGG-HFMDQFTYAERatdWRANNNIAESIFKQLSEEPh 178
Cdd:cd00640    80 MPEGASPEKVAQMRALGAEVVLVPG--DFDDAialAKELAEEDPGaYYVNQFDNPAN---IAGQGTIGLEILEQLGGQK- 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 179 piPEWIVCSPGTGGTSATLGRYVRYRRHDTRILCADPEVsvffdgycravdgqcpkelaitggsriegigrprvessfia 258
Cdd:cd00640   154 --PDAVVVPVGGGGNIAGIARALKELLPNVKVIGVEPEV----------------------------------------- 190
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2321362390 259 scvdvmIKVPDALSLAAMRHVSATLGKRVGGSTGTNFVGVLQAAQRMRDEGRqgsIVTILCD 320
Cdd:cd00640   191 ------VTVSDEEALEAIRLLAREEGILVEPSSAAALAAALKLAKKLGKGKT---VVVILTG 243
cysM PRK11761
cysteine synthase CysM;
31-325 5.03e-23

cysteine synthase CysM;


Pssm-ID: 236972  Cd Length: 296  Bit Score: 97.25  E-value: 5.03e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  31 LPGYPGIDLYFKDESSHPTGSLKHRLARSLFLYALANGWLREGRPVIEASSGSTAVSEAYFARLLGVPFIAVMPASTSPE 110
Cdd:PRK11761   21 LPPDRGNTILAKLEGNNPAGSVKDRPALSMIVQAEKRGEIKPGDTLIEATSGNTGIALAMIAAIKGYRMKLIMPENMSQE 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 111 KIAAIAFQGGRCHLVERACDLDSA---SHQLARETGGHFMDQFTYAEratDWRAN-NNIAESIFKQLSEE-PHpipewIV 185
Cdd:PRK11761  101 RRAAMRAYGAELILVPKEQGMEGArdlALQMQAEGEGKVLDQFANPD---NPLAHyETTGPEIWRQTEGRiTH-----FV 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 186 CSPGTGGTSATLGRYVRYRRHDTRILCADPEvsvffdgycravdgqcpkelaitGGSRIEGIGR------PRVessFIAS 259
Cdd:PRK11761  173 SSMGTTGTIMGVSRYLKEQNPAVQIVGLQPE-----------------------EGSSIPGIRRwpeeylPKI---FDAS 226
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2321362390 260 CVDVMIKVPDALSLAAMRHVSATLGKRVGGSTGtnfvGVLQAAQRMRDEGRQGSIVTILCDAGERY 325
Cdd:PRK11761  227 RVDRVLDVSQQEAENTMRRLAREEGIFCGVSSG----GAVAAALRIARENPNAVIVAIICDRGDRY 288
PLN02356 PLN02356
phosphateglycerate kinase
36-334 6.09e-20

phosphateglycerate kinase


Pssm-ID: 215204  Cd Length: 423  Bit Score: 90.44  E-value: 6.09e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  36 GIDLYFKDESSHPTGSLKHRLARSLFLYALANGWLREGRPVIEASSGSTAVSEAYFARLLGVPFIAVMPASTSPEKIAAI 115
Cdd:PLN02356   67 GCEILGKCEFLNPGGSVKDRVAVKIIEEALESGQLFPGGVVTEGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQIL 146
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 116 AFQGG------------RCHLVERACDLDSASHQLARE---------------------------------TGGHFMDQF 150
Cdd:PLN02356  147 EALGAtvervrpvsithKDHYVNIARRRALEANELASKrrkgsetdgihlektngciseeekenslfssscTGGFFADQF 226
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 151 tyaERATDWRAN-NNIAESIFKQLSEEPHPIpewiVCSPGTGGTSATLGRYVRYRRHDTRILCADPEVSVFFDGYCRAVd 229
Cdd:PLN02356  227 ---ENLANFRAHyEGTGPEIWEQTQGNLDAF----VAAAGTGGTLAGVSRFLQEKNPNIKCFLIDPPGSGLFNKVTRGV- 298
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 230 gQCPKELAitGGSRI--------EGIGRPRVESSFIASCVDVMIKVPDALSLAAMRHVSATLGKRVGGSTGTNFVGVLQA 301
Cdd:PLN02356  299 -MYTREEA--EGRRLknpfdtitEGIGINRLTQNFLMAKLDGAFRGTDKEAVEMSRYLLKNDGLFVGSSSAMNCVGAVRV 375
                         330       340       350
                  ....*....|....*....|....*....|...
gi 2321362390 302 AQRMrdeGRQGSIVTILCDAGERYAHSYYDPAW 334
Cdd:PLN02356  376 AQSL---GPGHTIVTILCDSGMRHLSKFHDPQY 405
PLN00011 PLN00011
cysteine synthase
42-343 6.08e-18

cysteine synthase


Pssm-ID: 177651  Cd Length: 323  Bit Score: 83.51  E-value: 6.08e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  42 KDESSHPTGSLKHRLARSLFLYALANGWLREGRP-VIEASSGSTAVSEAYFARLLGVPFIAVMPASTSPEKIAAIAFQGG 120
Cdd:PLN00011   37 KLEMMEPCSSVKDRIAYSMIKDAEDKGLITPGKStLIEATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGA 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 121 RCHLVERACD----LDSASHQLARETGGHFMDQFTYAERA-TDWRANnniAESIFKQLSEEphpiPEWIVCSPGTGGTSA 195
Cdd:PLN00011  117 EVHLTDQSIGlkgmLEKAEEILSKTPGGYIPQQFENPANPeIHYRTT---GPEIWRDSAGK----VDILVAGVGTGGTAT 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 196 TLGRYVRYRRHDTRILCADPEVSVFFDGycravdGQcpkelaiTGGSRIEGIGRPRVESSFIASCVDVMIKVPDALSLAA 275
Cdd:PLN00011  190 GVGKFLKEKNKDIKVCVVEPVESAVLSG------GQ-------PGPHLIQGIGSGIIPFNLDLTIVDEIIQVTGEEAIET 256
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2321362390 276 MRHVSATLGKRVGGSTGTNFVGVLQAAQRMRDEGRQgsIVTILCDAGERY-AHSYYDPAWYVAREIDVD 343
Cdd:PLN00011  257 AKLLALKEGLLVGISSGAAAAAALKVAKRPENAGKL--IVVIFPSGGERYlSTKLFESVRYEAENLPIE 323
IlvA COG1171
Threonine deaminase [Amino acid transport and metabolism]; Threonine deaminase is part of the ...
36-319 2.22e-16

Threonine deaminase [Amino acid transport and metabolism]; Threonine deaminase is part of the Pathway/BioSystem: Isoleucine, leucine, valine biosynthesis


Pssm-ID: 440784 [Multi-domain]  Cd Length: 327  Bit Score: 78.92  E-value: 2.22e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  36 GIDLYFKDESSHPTGSLKHRLArslfLYALANgwLRE---GRPVIEASSGSTAVSEAYFARLLGVPFIAVMPASTSPEKI 112
Cdd:COG1171    38 GAEVYLKLENLQPTGSFKLRGA----YNALAS--LSEeerARGVVAASAGNHAQGVAYAARLLGIPATIVMPETAPAVKV 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 113 AAIAFQGGRCHLVERACDlDS--ASHQLARETGGHFM----DQFTYAERATdwrannnIAESIFKQLSEEPHpipewIVC 186
Cdd:COG1171   112 AATRAYGAEVVLHGDTYD-DAeaAAAELAEEEGATFVhpfdDPDVIAGQGT-------IALEILEQLPDLDA-----VFV 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 187 SPGTGGTSATLGRYVRYRRHDTRILCADPEVSvffDGYCRAVDGQCPKELAiTGGSRIEGIGRPRV-ESSF--IASCVDV 263
Cdd:COG1171   179 PVGGGGLIAGVAAALKALSPDIRVIGVEPEGA---AAMYRSLAAGEPVTLP-GVDTIADGLAVGRPgELTFeiLRDLVDD 254
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2321362390 264 MIKVPDALSLAAMRHVSATLGKRVGGSTGTNFVGVLQAAQRMRDEgrqgSIVTILC 319
Cdd:COG1171   255 IVTVSEDEIAAAMRLLLERTKIVVEPAGAAALAALLAGKERLKGK----RVVVVLS 306
PLN02556 PLN02556
cysteine synthase/L-3-cyanoalanine synthase
42-328 9.18e-16

cysteine synthase/L-3-cyanoalanine synthase


Pssm-ID: 178171 [Multi-domain]  Cd Length: 368  Bit Score: 77.69  E-value: 9.18e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  42 KDESSHPTGSLKHRLARSLFLYALANGWLREGRPV-IEASSGSTAVSEAYFARLLGVPFIAVMPASTSPEKIAAIAFQGG 120
Cdd:PLN02556   79 KQEMFQPTSSIKDRPALAMIEDAEKKNLITPGKTTlIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGA 158
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 121 RCHLVERACDLDSA---SHQLARETGGHFM-DQFTYAeratdwrANNNIA-ESIFKQLSEEPHPIPEWIVCSPGTGGTSA 195
Cdd:PLN02556  159 ELVLTDPTKGMGGTvkkAYELLESTPDAFMlQQFSNP-------ANTQVHfETTGPEIWEDTLGQVDIFVMGIGSGGTVS 231
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 196 TLGRYVRYRRHDTRILCADPEVSvffdgycRAVDGQCPKELAITGgsriEGIG-RPRVESsfiascVDVMIKV-----PD 269
Cdd:PLN02556  232 GVGKYLKSKNPNVKIYGVEPAES-------NVLNGGKPGPHHITG----NGVGfKPDILD------MDVMEKVlevssED 294
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2321362390 270 ALSLAamRHVSATLGKRVGGSTGTNFVGVLQAAQRMRDEGRQgsIVTILCDAGERYAHS 328
Cdd:PLN02556  295 AVNMA--RELALKEGLMVGISSGANTVAALRLAKMPENKGKL--IVTVHPSFGERYLSS 349
Thr-dehyd cd01562
Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. ...
36-319 2.75e-15

Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.


Pssm-ID: 107205 [Multi-domain]  Cd Length: 304  Bit Score: 75.60  E-value: 2.75e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  36 GIDLYFKDESSHPTGSLKHRLArslfLYALANGwLREGRP--VIEASSGSTAVSEAYFARLLGVPFIAVMPASTSPEKIA 113
Cdd:cd01562    31 GAEVYLKCENLQKTGSFKIRGA----YNKLLSL-SEEERAkgVVAASAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVD 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 114 AIAFQGGrcHLVERACDLDSA---SHQLARETGGHFM----DQFTYAERATdwrannnIAESIFKQLSEephpiPEWIVC 186
Cdd:cd01562   106 ATRAYGA--EVVLYGEDFDEAeakARELAEEEGLTFIhpfdDPDVIAGQGT-------IGLEILEQVPD-----LDAVFV 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 187 SPGTGGTSATLGRYVRYRRHDTRILCADPEVsvfFDGYCRAVDGQCPKELAiTGGSRIEGIGRPRV-ESSF--IASCVDV 263
Cdd:cd01562   172 PVGGGGLIAGIATAVKALSPNTKVIGVEPEG---APAMAQSLAAGKPVTLP-EVDTIADGLAVKRPgELTFeiIRKLVDD 247
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2321362390 264 MIKVPDALSLAAMRHVSATLGKRVGGSTGTNFVGVLQAAQRMRDEgrqgSIVTILC 319
Cdd:cd01562   248 VVTVSEDEIAAAMLLLFEREKLVAEPAGALALAALLSGKLDLKGK----KVVVVLS 299
PLN02565 PLN02565
cysteine synthase
42-328 5.42e-15

cysteine synthase


Pssm-ID: 166206  Cd Length: 322  Bit Score: 74.96  E-value: 5.42e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  42 KDESSHPTGSLKHRLARSLFLYALANGWLREGRPV-IEASSGSTAVSEAYFARLLGVPFIAVMPASTSPE-KIAAIAFqG 119
Cdd:PLN02565   35 KLEMMEPCSSVKDRIGYSMITDAEEKGLIKPGESVlIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLErRIILLAF-G 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 120 GRCHLVERACDLDSASHQ----LARETGGHFMDQFTYAeratdwrANNNIA-ESIFKQLSEEPHPIPEWIVCSPGTGGTS 194
Cdd:PLN02565  114 AELVLTDPAKGMKGAVQKaeeiLAKTPNSYILQQFENP-------ANPKIHyETTGPEIWKGTGGKVDAFVSGIGTGGTI 186
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 195 ATLGRYVRYRRHDTRILCADPEVSVFFDGycravdGQcpkelaiTGGSRIEGIGRPRVESSFIASCVDVMIKVPDALSLA 274
Cdd:PLN02565  187 TGAGKYLKEQNPDIKLYGVEPVESAVLSG------GK-------PGPHKIQGIGAGFIPGVLDVDLLDEVVQVSSDEAIE 253
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2321362390 275 AMRHVSATLGKRVGGSTGTNFVGVLQAAQRMRDEGRQgsIVTILCDAGERYAHS 328
Cdd:PLN02565  254 TAKLLALKEGLLVGISSGAAAAAAIKIAKRPENAGKL--IVVIFPSFGERYLSS 305
PLN03013 PLN03013
cysteine synthase
42-315 6.70e-13

cysteine synthase


Pssm-ID: 178587 [Multi-domain]  Cd Length: 429  Bit Score: 69.42  E-value: 6.70e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  42 KDESSHPTGSLKHRLARSLFLYALANGWLREGRPV-IEASSGSTAVSEAYFARLLGVPFIAVMPASTSPEKIAAIAFQGG 120
Cdd:PLN03013  143 KLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVlVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGA 222
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 121 RCHLVERACDLDSASHQ----LARETGGHFMDQFtyaeratDWRANNNIA-ESIFKQLSEEPHPIPEWIVCSPGTGGTSA 195
Cdd:PLN03013  223 ELVLTDPAKGMTGAVQKaeeiLKNTPDAYMLQQF-------DNPANPKIHyETTGPEIWDDTKGKVDIFVAGIGTGGTIT 295
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 196 TLGRYVRYRRHDTRILCADPEVSVFFDGycravdgqcpkelAITGGSRIEGIGRPRVESSFIASCVDVMIKVPDALSLAA 275
Cdd:PLN03013  296 GVGRFIKEKNPKTQVIGVEPTESDILSG-------------GKPGPHKIQGIGAGFIPKNLDQKIMDEVIAISSEEAIET 362
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 2321362390 276 MRHVSATLGKRVGGSTGTNFVGVLQAAQRMRDEGRQGSIV 315
Cdd:PLN03013  363 AKQLALKEGLMVGISSGAAAAAAIKVAKRPENAGKLIAVS 402
Thr-synth_1 cd01563
Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last ...
24-192 7.30e-12

Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.


Pssm-ID: 107206 [Multi-domain]  Cd Length: 324  Bit Score: 65.69  E-value: 7.30e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  24 THLIPMDLPG--YPGIDLYFKDESSHPTGSLKHRLARSLFLYALANGWlregRPVIEASSGSTAVSEAYFARLLGVPFIA 101
Cdd:cd01563    23 TPLVRAPRLGerLGGKNLYVKDEGLNPTGSFKDRGMTVAVSKAKELGV----KAVACASTGNTSASLAAYAARAGIKCVV 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 102 VMPASTSPEKIAAIAFQGGRCHLVEracdldsashqlaretgGHFMDQFTYAERATD---WRANNN-----------IAE 167
Cdd:cd01563    99 FLPAGKALGKLAQALAYGATVLAVE-----------------GNFDDALRLVRELAEenwIYLSNSlnpyrlegqktIAF 161
                         170       180
                  ....*....|....*....|....*
gi 2321362390 168 SIFKQLSEEphpIPEWIVCSPGTGG 192
Cdd:cd01563   162 EIAEQLGWE---VPDYVVVPVGNGG 183
ThrC COG0498
Threonine synthase [Amino acid transport and metabolism]; Threonine synthase is part of the ...
36-126 4.91e-11

Threonine synthase [Amino acid transport and metabolism]; Threonine synthase is part of the Pathway/BioSystem: Threonine biosynthesis


Pssm-ID: 440264 [Multi-domain]  Cd Length: 394  Bit Score: 63.68  E-value: 4.91e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  36 GIDLYFKDESSHPTGSLKHRLARSLFLYALANGWLRegrpVIEASSGSTAVSEAYFARLLGVPFIAVMPAS-TSPEKIAA 114
Cdd:COG0498    80 GKNLYVKEEGHNPTGSFKDRAMQVAVSLALERGAKT----IVCASSGNGSAALAAYAARAGIEVFVFVPEGkVSPGQLAQ 155
                          90
                  ....*....|..
gi 2321362390 115 IAFQGGRCHLVE 126
Cdd:COG0498   156 MLTYGAHVIAVD 167
PRK05638 PRK05638
threonine synthase; Validated
24-117 1.00e-08

threonine synthase; Validated


Pssm-ID: 235539 [Multi-domain]  Cd Length: 442  Bit Score: 56.74  E-value: 1.00e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  24 THLIPMDLPGYPGIDLYFKDESSHPTGSLKHRLARSLFLYAL---ANGWlregrpvIEASSGSTAVSEAYFARLLGVPFI 100
Cdd:PRK05638   67 TPLIRARISEKLGENVYIKDETRNPTGSFRDRLATVAVSYGLpyaANGF-------IVASDGNAAASVAAYSARAGKEAF 139
                          90
                  ....*....|....*...
gi 2321362390 101 AVMPASTSPEK-IAAIAF 117
Cdd:PRK05638  140 VVVPRKVDKGKlIQMIAF 157
PRK08639 PRK08639
threonine dehydratase; Validated
36-216 3.36e-08

threonine dehydratase; Validated


Pssm-ID: 236318 [Multi-domain]  Cd Length: 420  Bit Score: 54.81  E-value: 3.36e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  36 GIDLYFKDESSHPTGSLKHRLA----RSLFLYALANGwlregrpVIEASSGSTAVSEAYFARLLGVPFIAVMPASTSPEK 111
Cdd:PRK08639   39 GANVYLKREDLQPVRSYKLRGAynaiSQLSDEELAAG-------VVCASAGNHAQGVAYACRHLGIPGVIFMPVTTPQQK 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 112 IAAIAFQGG---RCHLVERACDlDS--ASHQLARETGGHFMDQF----TYAERATdwrannnIAESIFKQLSEEPHpiPE 182
Cdd:PRK08639  112 IDQVRFFGGefvEIVLVGDTFD-DSaaAAQEYAEETGATFIPPFddpdVIAGQGT-------VAVEILEQLEKEGS--PD 181
                         170       180       190
                  ....*....|....*....|....*....|....
gi 2321362390 183 WIVCSPGTGGTSATLGRYVRYRRHDTRILCADPE 216
Cdd:PRK08639  182 YVFVPVGGGGLISGVTTYLKERSPKTKIIGVEPA 215
PRK08813 PRK08813
threonine dehydratase; Provisional
39-150 9.64e-08

threonine dehydratase; Provisional


Pssm-ID: 236339 [Multi-domain]  Cd Length: 349  Bit Score: 53.09  E-value: 9.64e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  39 LYFKDESSHPTGSLKHRLARSLFLYALANGwlrEGRPVIEASSGSTAVSEAYFARLLGVPFIAVMPASTSPEKIAAIAFQ 118
Cdd:PRK08813   50 VWLKLENLQRTGSYKVRGALNALLAGLERG---DERPVICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAHW 126
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2321362390 119 GGRCHlvERACDLDSA---SHQLARETGGHFMDQF 150
Cdd:PRK08813  127 GATVR--QHGNSYDEAyafARELADQNGYRFLSAF 159
PRK06815 PRK06815
threonine/serine dehydratase;
36-319 1.31e-07

threonine/serine dehydratase;


Pssm-ID: 180709 [Multi-domain]  Cd Length: 317  Bit Score: 52.77  E-value: 1.31e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  36 GIDLYFKDESSHPTGSLKHRLARSLFLyaLANGWLREgRPVIEASSGSTAVSEAYFARLLGVPFIAVMPASTSPEKIAAI 115
Cdd:PRK06815   34 GCEVYLKCEHLQHTGSFKFRGASNKLR--LLNEAQRQ-QGVITASSGNHGQGVALAAKLAGIPVTVYAPEQASAIKLDAI 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 116 AFQGGRCHLVERAC-DLDSASHQLARETGGHFM----DQFTYAERATdwrannnIAESIFKQlseepHPIPEWIVCSPGT 190
Cdd:PRK06815  111 RALGAEVRLYGGDAlNAELAARRAAEQQGKVYIspynDPQVIAGQGT-------IGMELVEQ-----QPDLDAVFVAVGG 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 191 GGTSATLGRYVRYRRHDTRILCADPEVSVFFDGYCRAVDGQCPKELAITGGSRIEGIGRPRVESSFIASCVDVMIKVPDA 270
Cdd:PRK06815  179 GGLISGIATYLKTLSPKTEIIGCWPANSPSLYTSLEAGEIVEVAEQPTLSDGTAGGVEPGAITFPLCQQLIDQKVLVSEE 258
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 2321362390 271 LSLAAMRHVSATLGKRVGGSTGTNFVGVLQAAQRMRdeGRQgsIVTILC 319
Cdd:PRK06815  259 EIKEAMRLIAETDRWLIEGAAGVALAAALKLAPRYQ--GKK--VAVVLC 303
PRK08246 PRK08246
serine/threonine dehydratase;
1-149 4.73e-07

serine/threonine dehydratase;


Pssm-ID: 181319 [Multi-domain]  Cd Length: 310  Bit Score: 50.72  E-value: 4.73e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390   1 MSQRQWVAAAIQKIEADFNRsadTHLIPMDLPGYPGIDLYFKDESSHPTGSLKhrlARSLFLYALANGWLREGrpVIEAS 80
Cdd:PRK08246    4 MITRSDVRAAAQRIAPHIRR---TPVLEADGAGFGPAPVWLKLEHLQHTGSFK---ARGAFNRLLAAPVPAAG--VVAAS 75
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2321362390  81 SGSTAVSEAYFARLLGVPFIAVMPASTSPEKIAAIAFQGGRCHLV-ERACDLDSASHQLARETGG---HFMDQ 149
Cdd:PRK08246   76 GGNAGLAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVgAEYADALEAAQAFAAETGAllcHAYDQ 148
PRK06608 PRK06608
serine/threonine dehydratase;
11-120 7.90e-07

serine/threonine dehydratase;


Pssm-ID: 235842 [Multi-domain]  Cd Length: 338  Bit Score: 50.15  E-value: 7.90e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  11 IQKIEADFNR-SADTHLIPM----DLPGYPGIDLYFKDESSHPTGSLKHRLARSLFLYALANGWLREgrPVIEASSGSTA 85
Cdd:PRK06608    7 PQNIAAAHNRiKQYLHLTPIvhseSLNEMLGHEIFFKVESLQKTGAFKVRGVLNHLLELKEQGKLPD--KIVAYSTGNHG 84
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2321362390  86 VSEAYFARLLGVPFIAVMPASTSPEKIAAIAFQGG 120
Cdd:PRK06608   85 QAVAYASKLFGIKTRIYLPLNTSKVKQQAALYYGG 119
L-Ser-dehyd cd06448
Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the ...
40-192 2.59e-06

Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.


Pssm-ID: 107209  Cd Length: 316  Bit Score: 48.45  E-value: 2.59e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  40 YFKDESSHPTGSLKHRLARSLFLYALANGWLREGRPVieASSGSTA-VSEAYFARLLGVPFIAVMPASTSPEKIAAIAFQ 118
Cdd:cd06448    19 FLKLENLQPSGSFKIRGIGHLCQKSAKQGLNECVHVV--CSSGGNAgLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDE 96
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2321362390 119 GGRCHL---VERACDlDSASHQLA-RETGGHFMDQFtyaERATDWRANNNIAESIFKQLseEPHPIPEWIVCSPGTGG 192
Cdd:cd06448    97 GATVVVhgkVWWEAD-NYLREELAeNDPGPVYVHPF---DDPLIWEGHSSMVDEIAQQL--QSQEKVDAIVCSVGGGG 168
PRK12483 PRK12483
threonine dehydratase; Reviewed
39-218 3.72e-06

threonine dehydratase; Reviewed


Pssm-ID: 237111 [Multi-domain]  Cd Length: 521  Bit Score: 48.64  E-value: 3.72e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  39 LYFKDESSHPTGSLKHRLARSLFLYALANgwlREGRPVIEASSGSTAVSEAYFARLLGVPFIAVMPASTSPEKIAAIAFQ 118
Cdd:PRK12483   54 VLLKREDLQPVFSFKIRGAYNKMARLPAE---QLARGVITASAGNHAQGVALAAARLGVKAVIVMPRTTPQLKVDGVRAH 130
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 119 GGrcHLVERAcdlDSASH------QLARETGGHFM----DQFTYAERATdwrannnIAESIFKQlseepHPIP-EWIVCS 187
Cdd:PRK12483  131 GG--EVVLHG---ESFPDalahalKLAEEEGLTFVppfdDPDVIAGQGT-------VAMEILRQ-----HPGPlDAIFVP 193
                         170       180       190
                  ....*....|....*....|....*....|.
gi 2321362390 188 PGTGGTSATLGRYVRYRRHDTRILCADPEVS 218
Cdd:PRK12483  194 VGGGGLIAGIAAYVKYVRPEIKVIGVEPDDS 224
PRK06110 PRK06110
threonine dehydratase;
36-150 6.87e-05

threonine dehydratase;


Pssm-ID: 235699  Cd Length: 322  Bit Score: 44.21  E-value: 6.87e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  36 GIDLYFKDESSHPTGSLKHRLARSLFlyalanGWLREGRP----VIEASSGSTAVSEAYFARLLGVPFIAVMPASTSPEK 111
Cdd:PRK06110   35 GCEVWVKHENHTPTGAFKVRGGLVYF------DRLARRGPrvrgVISATRGNHGQSVAFAARRHGLAATIVVPHGNSVEK 108
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 2321362390 112 IAAIAFQGGRchLVERACDLDSA---SHQLARETGGHFMDQF 150
Cdd:PRK06110  109 NAAMRALGAE--LIEHGEDFQAAreeAARLAAERGLHMVPSF 148
PRK08329 PRK08329
threonine synthase; Validated
36-126 1.91e-04

threonine synthase; Validated


Pssm-ID: 236244 [Multi-domain]  Cd Length: 347  Bit Score: 42.89  E-value: 1.91e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  36 GIDLYFKDESSHPTGSLKHRLArslflYALANGWLREG-RPVIEASSGSTAVSEAYFARLLGVPFIAVMPASTSPEKIAA 114
Cdd:PRK08329   71 SIKVYFKLDYLQPTGSFKDRGT-----YVTVAKLKEEGiNEVVIDSSGNAALSLALYSLSEGIKVHVFVSYNASKEKISL 145
                          90
                  ....*....|..
gi 2321362390 115 IAFQGGRCHLVE 126
Cdd:PRK08329  146 LSRLGAELHFVE 157
PRK06381 PRK06381
threonine synthase; Validated
17-108 2.30e-04

threonine synthase; Validated


Pssm-ID: 235789  Cd Length: 319  Bit Score: 42.77  E-value: 2.30e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  17 DFNRSADTHLI-PMDLPGYPGID-LYFKDESSHPTGSLKHRLARSLFLYALANGWlregRPVIEASSGSTAVSEAYFARL 94
Cdd:PRK06381    9 EEKPPGGTPLLrARKLEEELGLRkIYLKFEGANPTGTQKDRIAEAHVRRAMRLGY----SGITVGTCGNYGASIAYFARL 84
                          90
                  ....*....|....
gi 2321362390  95 LGVPFIAVMPASTS 108
Cdd:PRK06381   85 YGLKAVIFIPRSYS 98
PRK07048 PRK07048
threo-3-hydroxy-L-aspartate ammonia-lyase;
7-143 2.31e-04

threo-3-hydroxy-L-aspartate ammonia-lyase;


Pssm-ID: 235918 [Multi-domain]  Cd Length: 321  Bit Score: 42.70  E-value: 2.31e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390   7 VAAAIQKIEADFNRS-------ADTHLipmdlpgypGIDLYFKDESSHPTGSLKHRLARSLfLYALANGWLREGrpVIEA 79
Cdd:PRK07048   11 VAAAAARLAGVAHRTpvltsrtADART---------GAQVFFKCENFQRMGAFKFRGAYNA-LSQFSPEQRRAG--VVTF 78
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2321362390  80 SSGSTAVSEAYFARLLGVPFIAVMPASTSPEKIAAIAFQGGRCHLVER-ACDLDSASHQLARETG 143
Cdd:PRK07048   79 SSGNHAQAIALSARLLGIPATIVMPQDAPAAKVAATRGYGGEVVTYDRyTEDREEIGRRLAEERG 143
eutB PRK07476
threonine dehydratase; Provisional
36-143 8.57e-04

threonine dehydratase; Provisional


Pssm-ID: 236025 [Multi-domain]  Cd Length: 322  Bit Score: 40.72  E-value: 8.57e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  36 GIDLYFKDESSHPTGSLKHRLARSLFLyALANGWLREGrpVIEASSGSTAVSEAYFARLLGVPFIAVMPASTSPEKIAAI 115
Cdd:PRK07476   33 GVPVWLKLETLQPTGSFKLRGATNALL-SLSAQERARG--VVTASTGNHGRALAYAARALGIRATICMSRLVPANKVDAI 109
                          90       100       110
                  ....*....|....*....|....*....|.
gi 2321362390 116 AFQGGRCHLVERAcdLDSASH---QLARETG 143
Cdd:PRK07476  110 RALGAEVRIVGRS--QDDAQAeveRLVREEG 138
PLN02550 PLN02550
threonine dehydratase
36-215 9.40e-04

threonine dehydratase


Pssm-ID: 178165 [Multi-domain]  Cd Length: 591  Bit Score: 41.06  E-value: 9.40e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  36 GIDLYFKDESSHPTGSLKHRLARSLfLYALANGWLREGrpVIEASSGSTAVSEAYFARLLGVPFIAVMPASTSPEKIAAI 115
Cdd:PLN02550  123 GVKVLLKREDLQPVFSFKLRGAYNM-MAKLPKEQLDKG--VICSSAGNHAQGVALSAQRLGCDAVIAMPVTTPEIKWQSV 199
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390 116 AFQGGRCHLVERACDLDSA-SHQLARETGGHFMDQFTYAERATdwrANNNIAESIFKQLSEEPHPipewIVCSPGTGGTS 194
Cdd:PLN02550  200 ERLGATVVLVGDSYDEAQAyAKQRALEEGRTFIPPFDHPDVIA---GQGTVGMEIVRQHQGPLHA----IFVPVGGGGLI 272
                         170       180
                  ....*....|....*....|.
gi 2321362390 195 ATLGRYVRYRRHDTRILCADP 215
Cdd:PLN02550  273 AGIAAYVKRVRPEVKIIGVEP 293
PLN02970 PLN02970
serine racemase
8-152 1.18e-03

serine racemase


Pssm-ID: 215524 [Multi-domain]  Cd Length: 328  Bit Score: 40.43  E-value: 1.18e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390   8 AAAIQKIEADFNRSADT-HLIPM----DLPGYPGIDLYFKDESSHPTGSLKHRLA-RSLFlyALANGWLREGrpVIEASS 81
Cdd:PLN02970    8 AADLSSIREARKRIAPFiHRTPVltssSLDALAGRSLFFKCECFQKGGAFKFRGAcNAIF--SLSDDQAEKG--VVTHSS 83
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2321362390  82 GSTAVSEAYFARLLGVPFIAVMPASTSPEKIAAIAFQGGRCHLVERACDL-DSASHQLARETGGHFMDQFTY 152
Cdd:PLN02970   84 GNHAAALALAAKLRGIPAYIVVPKNAPACKVDAVIRYGGIITWCEPTVESrEAVAARVQQETGAVLIHPYND 155
PRK07334 PRK07334
threonine dehydratase; Provisional
36-143 1.98e-03

threonine dehydratase; Provisional


Pssm-ID: 235994 [Multi-domain]  Cd Length: 403  Bit Score: 39.88  E-value: 1.98e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321362390  36 GIDLYFKDESSHPTGSLKHRLArslfLYALANgwLREG---RPVIEASSGSTAVSEAYFARLLGVPFIAVMPASTSPEKI 112
Cdd:PRK07334   37 GAEVWLKFENLQFTASFKERGA----LNKLLL--LTEEeraRGVIAMSAGNHAQGVAYHAQRLGIPATIVMPRFTPTVKV 110
                          90       100       110
                  ....*....|....*....|....*....|....
gi 2321362390 113 AAIAFQGGRchLVERACDLDSAS---HQLARETG 143
Cdd:PRK07334  111 ERTRGFGAE--VVLHGETLDEARahaRELAEEEG 142
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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