|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-352 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 761.11 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 1 DALVDLPAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLY 80
Cdd:MTH00131 16 DALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIY 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 81 LHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATL 160
Cdd:MTH00131 96 LHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 161 TRFFAFHFLLPFIVAAATFLHLLFLHETGSNNPLGLNSDMDKIPFHPYFTYKDLLGFAILIICLTALALFSPNLLGDPDN 240
Cdd:MTH00131 176 TRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDN 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 241 FTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRGLTFRPITQILFWTLIADVFIL 320
Cdd:MTH00131 256 FTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVLIL 335
|
330 340 350
....*....|....*....|....*....|..
gi 2164563740 321 TWIGGMPVEHPFIIIGQVASVLYFALFLIFLP 352
Cdd:MTH00131 336 TWIGGMPVEHPFIIIGQVASVLYFSLFLVLMP 367
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
7-352 |
8.61e-131 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 379.13 E-value: 8.61e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 7 PAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYLHIGRG 86
Cdd:COG1290 31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 87 LYYGSylYKE----TWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTR 162
Cdd:COG1290 111 FFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNR 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 163 FFAFH-FLLPFIVAAATFLHLLFLHETGSNNPLG----LNSDMDKIPFHPYFTYKDLLGFAILIICLTALALFSPNllGD 237
Cdd:COG1290 189 FFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NP 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 238 PDNFTPANPLVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLASILVLMVVPILHTSKQRGLTFRPITQILFWTLIA 315
Cdd:COG1290 267 PPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIV 346
|
330 340 350
....*....|....*....|....*....|....*..
gi 2164563740 316 DVFILTWIGGMPVehPFIIIGQVASVLYFALFLIFLP 352
Cdd:COG1290 347 FFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLP 381
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
2-191 |
5.09e-93 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 275.79 E-value: 5.09e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 2 ALVDLPAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYL 81
Cdd:cd00284 9 SLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 82 HIGRGLYYGSY--LYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNAT 159
Cdd:cd00284 89 HIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNAT 168
|
170 180 190
....*....|....*....|....*....|..
gi 2164563740 160 LTRFFAFHFLLPFIVAAATFLHLLFLHETGSN 191
Cdd:cd00284 169 LTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
3-189 |
3.63e-86 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 258.08 E-value: 3.63e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 3 LVDLPAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYLH 82
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 83 IGRGLYYG--SYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATL 160
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 2164563740 161 TRFFAFHFLLPFIVAAATFLHLLFLHETG 189
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
221-324 |
1.63e-12 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 64.82 E-value: 1.63e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 221 IICLTALALFSPNLLGDPdnftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRGL 300
Cdd:TIGR01156 48 IACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQN 122
|
90 100
....*....|....*....|....*
gi 2164563740 301 TF-RPITQILFwtLIADVFILtWIG 324
Cdd:TIGR01156 123 PFrRPVATTVF--LFGTVVAL-WLG 144
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-352 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 761.11 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 1 DALVDLPAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLY 80
Cdd:MTH00131 16 DALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIY 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 81 LHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATL 160
Cdd:MTH00131 96 LHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 161 TRFFAFHFLLPFIVAAATFLHLLFLHETGSNNPLGLNSDMDKIPFHPYFTYKDLLGFAILIICLTALALFSPNLLGDPDN 240
Cdd:MTH00131 176 TRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDN 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 241 FTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRGLTFRPITQILFWTLIADVFIL 320
Cdd:MTH00131 256 FTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVLIL 335
|
330 340 350
....*....|....*....|....*....|..
gi 2164563740 321 TWIGGMPVEHPFIIIGQVASVLYFALFLIFLP 352
Cdd:MTH00131 336 TWIGGMPVEHPFIIIGQVASVLYFSLFLVLMP 367
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-352 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 696.26 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 1 DALVDLPAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLY 80
Cdd:MTH00119 17 NSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 81 LHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATL 160
Cdd:MTH00119 97 LHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTL 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 161 TRFFAFHFLLPFIVAAATFLHLLFLHETGSNNPLGLNSDMDKIPFHPYFTYKDLLGFAILIICLTALALFSPNLLGDPDN 240
Cdd:MTH00119 177 TRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPEN 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 241 FTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRGLTFRPITQILFWTLIADVFIL 320
Cdd:MTH00119 257 FTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLIL 336
|
330 340 350
....*....|....*....|....*....|..
gi 2164563740 321 TWIGGMPVEHPFIIIGQVASVLYFALFLIFLP 352
Cdd:MTH00119 337 TWIGSQPVEHPFIIIGQLASILYFTILLILFP 368
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
2-352 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 681.02 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 2 ALVDLPAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYL 81
Cdd:MTH00074 18 SFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYL 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 82 HIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLT 161
Cdd:MTH00074 98 HIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLT 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 162 RFFAFHFLLPFIVAAATFLHLLFLHETGSNNPLGLNSDMDKIPFHPYFTYKDLLGFAILIICLTALALFSPNLLGDPDNF 241
Cdd:MTH00074 178 RFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPDNF 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 242 TPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRGLTFRPITQILFWTLIADVFILT 321
Cdd:MTH00074 258 TPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANTLILT 337
|
330 340 350
....*....|....*....|....*....|.
gi 2164563740 322 WIGGMPVEHPFIIIGQVASVLYFALFLIFLP 352
Cdd:MTH00074 338 WIGGQPVEDPFIEIGQAASILYFLLFIIIIP 368
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-352 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 679.05 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 1 DALVDLPAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLY 80
Cdd:MTH00100 16 HSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLF 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 81 LHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATL 160
Cdd:MTH00100 96 LHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 161 TRFFAFHFLLPFIVAAATFLHLLFLHETGSNNPLGLNSDMDKIPFHPYFTYKDLLGFAILIICLTALALFSPNLLGDPDN 240
Cdd:MTH00100 176 TRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDN 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 241 FTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRGLTFRPITQILFWTLIADVFIL 320
Cdd:MTH00100 256 YTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTL 335
|
330 340 350
....*....|....*....|....*....|..
gi 2164563740 321 TWIGGMPVEHPFIIIGQVASVLYFALFLIFLP 352
Cdd:MTH00100 336 TWIGGQPVEHPFIIIGQLASILYFLIILILMP 367
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-352 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 649.28 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 1 DALVDLPAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLY 80
Cdd:MTH00191 13 GSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 81 LHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATL 160
Cdd:MTH00191 93 LHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 161 TRFFAFHFLLPFIVAAATFLHLLFLHETGSNNPLGLNSDMDKIPFHPYFTYKDLLGFAILIICLTALALFSPNLLGDPDN 240
Cdd:MTH00191 173 TRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPEN 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 241 FTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRGLTFRPITQILFWTLIADVFIL 320
Cdd:MTH00191 253 FIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFILL 332
|
330 340 350
....*....|....*....|....*....|..
gi 2164563740 321 TWIGGMPVEHPFIIIGQVASVLYFALFLIFLP 352
Cdd:MTH00191 333 TWLGGQPVEDPFILLGQISSFLYFFLFLLLFP 364
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
2-350 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 644.14 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 2 ALVDLPAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYL 81
Cdd:MTH00156 7 SLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 82 HIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLT 161
Cdd:MTH00156 87 HIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLT 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 162 RFFAFHFLLPFIVAAATFLHLLFLHETGSNNPLGLNSDMDKIPFHPYFTYKDLLGFAILIICLTALALFSPNLLGDPDNF 241
Cdd:MTH00156 167 RFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENF 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 242 TPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRGLTFRPITQILFWTLIADVFILT 321
Cdd:MTH00156 247 IPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIVILLT 326
|
330 340
....*....|....*....|....*....
gi 2164563740 322 WIGGMPVEHPFIIIGQVASVLYFALFLIF 350
Cdd:MTH00156 327 WIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
2-352 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 611.33 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 2 ALVDLPAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYL 81
Cdd:MTH00034 17 SLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYF 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 82 HIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLT 161
Cdd:MTH00034 97 HIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLT 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 162 RFFAFHFLLPFIVAAATFLHLLFLHETGSNNPLGLNSDMDKIPFHPYFTYKDLLGFAILIICLTALALFSPNLLGDPDNF 241
Cdd:MTH00034 177 RFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPENF 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 242 TPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRGLTFRPITQILFWTLIADVFILT 321
Cdd:MTH00034 257 IPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATFFILT 336
|
330 340 350
....*....|....*....|....*....|.
gi 2164563740 322 WIGGMPVEHPFIIIGQVASVLYFALFLIFLP 352
Cdd:MTH00034 337 WIGSQPVEYPFILLGQVASVLYFSLFLFFFP 367
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-349 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 608.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 1 DALVDLPAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLY 80
Cdd:MTH00145 17 GSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 81 LHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATL 160
Cdd:MTH00145 97 LHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATL 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 161 TRFFAFHFLLPFIVAAATFLHLLFLHETGSNNPLGLNSDMDKIPFHPYFTYKDLLGFAILIICLTALALFSPNLLGDPDN 240
Cdd:MTH00145 177 KRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPEN 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 241 FTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRGLTFRPITQILFWTLIADVFIL 320
Cdd:MTH00145 257 FIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNFFIL 336
|
330 340
....*....|....*....|....*....
gi 2164563740 321 TWIGGMPVEHPFIIIGQVASVLYFALFLI 349
Cdd:MTH00145 337 TWIGACPVEEPYETIGQVFTVLYFLFFLI 365
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
2-350 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 568.54 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 2 ALVDLPAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYL 81
Cdd:MTH00016 18 SLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYL 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 82 HIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLT 161
Cdd:MTH00016 98 HIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLT 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 162 RFFAFHFLLPFIVAAATFLHLLFLHETGSNNPLGLNSDMDKIPFHPYFTYKDLLGFAILIICLTALALFSPNLLGDPDNF 241
Cdd:MTH00016 178 RFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPENF 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 242 TPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRGLTFRPITQILFWTLIADVFILT 321
Cdd:MTH00016 258 IPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNFLLLT 337
|
330 340
....*....|....*....|....*....
gi 2164563740 322 WIGGMPVEHPFIIIGQVASVLYFALFLIF 350
Cdd:MTH00016 338 WIGGRPVEPPYEFLGQIFTVFYFFYFMIN 366
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
3-352 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 516.18 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 3 LVDLPAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYLH 82
Cdd:MTH00022 17 LVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIH 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 83 IGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTR 162
Cdd:MTH00022 97 IGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNR 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 163 FFAFHFLLPFIVAAATFLHLLFLHETGSNNPLGLNSDMDKIPFHPYFTYKDLLGFAILIICLTALALFSPNLLGDPDNFT 242
Cdd:MTH00022 177 FFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFI 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 243 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRGLTFRPITQILFWTLIADVFILTW 322
Cdd:MTH00022 257 QANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFILLTW 336
|
330 340 350
....*....|....*....|....*....|
gi 2164563740 323 IGGMPVEHPFIIIGQVASVLYFALFLIFLP 352
Cdd:MTH00022 337 IGSQVVEEPFILIGQLLSFFYFFYFLVLIP 366
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
3-352 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 510.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 3 LVDLPAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYLH 82
Cdd:MTH00053 19 FIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFH 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 83 IGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTR 162
Cdd:MTH00053 99 IGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNR 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 163 FFAFHFLLPFIVAAATFLHLLFLHETGSNNPLGLNSDMDKIPFHPYFTYKDLLGFAILIICLTALALFSPNLLGDPDNFT 242
Cdd:MTH00053 179 FYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFK 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 243 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRGLTFRPITQILFWTLIADVFILTW 322
Cdd:MTH00053 259 QANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFFLLTW 338
|
330 340 350
....*....|....*....|....*....|
gi 2164563740 323 IGGMPVEHPFIIIGQVASVLYFALFLIFLP 352
Cdd:MTH00053 339 IGGQPVEEPYILIGQIASIFYFAYFLILMP 368
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
2-349 |
1.86e-180 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 504.84 E-value: 1.86e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 2 ALVDLPAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYL 81
Cdd:MTH00224 18 SLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYL 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 82 HIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLT 161
Cdd:MTH00224 98 HVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLN 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 162 RFFAFHFLLPFIVAAATFLHLLFLHETGSNNPLGLNSDMDKIPFHPYFTYKDLLGFAILIICLTALALFSPNLLGDPDNF 241
Cdd:MTH00224 178 RFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPENF 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 242 TPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRGLTFRPITQILFWTLIADVFILT 321
Cdd:MTH00224 258 LMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSWAILT 337
|
330 340
....*....|....*....|....*...
gi 2164563740 322 WIGGMPVEHPFIIIGQVASVLYFALFLI 349
Cdd:MTH00224 338 WIGGRPVEDPFEGIGQVFTILYFSYFII 365
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
1-352 |
1.28e-144 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 413.95 E-value: 1.28e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 1 DALVDLPAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLY 80
Cdd:MTH00033 13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 81 LHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATL 160
Cdd:MTH00033 93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 161 TRFFAFHFLLPFIVAAATFLHLLFLHETGSNNPLGLNSDMDKIPFHPYFTYKDLLGFAILIICLTALALFS--PNLLGDP 238
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriETLLQDP 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 239 DNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRGLTFRPITQILFWTLIADVF 318
Cdd:MTH00033 253 ENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFI 332
|
330 340 350
....*....|....*....|....*....|....*
gi 2164563740 319 ILTWIGGMPV-EHPFIIIGQVASVLYFALFLIFLP 352
Cdd:MTH00033 333 ILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVP 367
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
7-352 |
8.61e-131 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 379.13 E-value: 8.61e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 7 PAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYLHIGRG 86
Cdd:COG1290 31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 87 LYYGSylYKE----TWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTR 162
Cdd:COG1290 111 FFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNR 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 163 FFAFH-FLLPFIVAAATFLHLLFLHETGSNNPLG----LNSDMDKIPFHPYFTYKDLLGFAILIICLTALALFSPNllGD 237
Cdd:COG1290 189 FFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NP 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 238 PDNFTPANPLVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLASILVLMVVPILHTSKQRGLTFRPITQILFWTLIA 315
Cdd:COG1290 267 PPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIV 346
|
330 340 350
....*....|....*....|....*....|....*..
gi 2164563740 316 DVFILTWIGGMPVehPFIIIGQVASVLYFALFLIFLP 352
Cdd:COG1290 347 FFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLP 381
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
3-351 |
5.74e-127 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 368.11 E-value: 5.74e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 3 LVDLPAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYLH 82
Cdd:MTH00086 7 VVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLH 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 83 IGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTR 162
Cdd:MTH00086 87 IFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKF 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 163 FFAFHFLLPFIVAAATFLHLLFLHETGSNNPLGLNSDMDKIPFHPYFTYKDLLGFaILIICLTALALFSPNLLGDPDNFT 242
Cdd:MTH00086 167 FFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNI-IFWLVFIIFSLFYPFNLGDPEMFI 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 243 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQrglTFRPITQILFWTLIADVFILTW 322
Cdd:MTH00086 246 EADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNYTS---CLNKLNKFLVFSFIVVNVILSW 322
|
330 340
....*....|....*....|....*....
gi 2164563740 323 IGGMPVEHPFIIIGQVASVLYFALFLIFL 351
Cdd:MTH00086 323 LGQCLVEYPFLFLSQIFSFIYFFLILLML 351
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
3-350 |
3.15e-93 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 282.26 E-value: 3.15e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 3 LVDLPAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYLH 82
Cdd:MTH00046 9 LIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIH 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 83 IGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTR 162
Cdd:MTH00046 89 MGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 163 FFAFHFLLPFIVAAATFLHLLFLHETGSNNPLGL-NSDMDKIPFHPYFTYKDLLGFAILIICLTALALFSPNLLGDPDNF 241
Cdd:MTH00046 169 VFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAY 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 242 TPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGvLALLASILVLMVVPilhtSKQRGLTFRPITQILFWTLIADVFILT 321
Cdd:MTH00046 249 LEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVP----TFNGSSVYSVWRQVNFWLIVSLFFSLS 323
|
330 340
....*....|....*....|....*....
gi 2164563740 322 WIGGMPVEHPFIIIGQVASVLYFALFLIF 350
Cdd:MTH00046 324 YLGGCHPEYPYLLISQLFSVLMVLLLFIF 352
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
2-191 |
5.09e-93 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 275.79 E-value: 5.09e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 2 ALVDLPAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYL 81
Cdd:cd00284 9 SLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 82 HIGRGLYYGSY--LYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNAT 159
Cdd:cd00284 89 HIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNAT 168
|
170 180 190
....*....|....*....|....*....|..
gi 2164563740 160 LTRFFAFHFLLPFIVAAATFLHLLFLHETGSN 191
Cdd:cd00284 169 LTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
3-189 |
3.63e-86 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 258.08 E-value: 3.63e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 3 LVDLPAPSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYLH 82
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 83 IGRGLYYG--SYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATL 160
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 2164563740 161 TRFFAFHFLLPFIVAAATFLHLLFLHETG 189
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
192-339 |
3.38e-55 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 177.45 E-value: 3.38e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 192 NPLGLNSDMDKIPFHPYFTYKDLLGFAILIICLTALALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPN 271
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2164563740 272 KLGGVLALLASILVLMVVPILHTSKQRGlTFRPITQILFWTLIADVFILTWIGGMPVEHPFIIIGQVA 339
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
73-238 |
1.17e-49 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 163.95 E-value: 1.17e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 73 SFFFICLYLHIGRGLYYGSYLYKE--TWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIW 150
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 151 GGFSVDNATLTRFFAFHF-LLPFIVAAATFLHLLFLHETGSNNPLGLNSDMDKIPFHPYFTYKDLLGFAILIICLTALAL 229
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 2164563740 230 FSPNLLGDP 238
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
243-343 |
5.21e-47 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 154.56 E-value: 5.21e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 243 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRGLTFRPITQILFWTLIADVFILTW 322
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 2164563740 323 IGGMPVEHPFIIIGQVASVLY 343
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
18-194 |
9.31e-39 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 137.54 E-value: 9.31e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 18 FGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYLHIGRGLYYGSYLYKE- 96
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 97 -TWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFAFH-FLLPFIV 174
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170 180
....*....|....*....|
gi 2164563740 175 AAATFLHLLFLHETGSNNPL 194
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
9-194 |
1.99e-33 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 123.29 E-value: 1.99e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 9 PSNISAWWNFGSLLALCLGAQILTGLFLAMHYTSDVTMAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYLHIGRGLY 88
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 89 YGSYLYKE--TWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFAF 166
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*....
gi 2164563740 167 H-FLLPFIVAAATFLHLLFLHETGSNNPL 194
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
221-324 |
1.59e-12 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 64.64 E-value: 1.59e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 221 IICLTALALFSPNLLGDPdnftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPIL-HTSKQRG 299
Cdd:CHL00058 48 IACNVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLeNVNKFQN 122
|
90 100
....*....|....*....|....*
gi 2164563740 300 LTFRPITQILFwtLIADVFILtWIG 324
Cdd:CHL00058 123 PFRRPVATTVF--LIGTAVAL-WLG 144
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
221-324 |
1.63e-12 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 64.82 E-value: 1.63e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 221 IICLTALALFSPNLLGDPdnftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRGL 300
Cdd:TIGR01156 48 IACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQN 122
|
90 100
....*....|....*....|....*
gi 2164563740 301 TF-RPITQILFwtLIADVFILtWIG 324
Cdd:TIGR01156 123 PFrRPVATTVF--LFGTVVAL-WLG 144
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
225-314 |
8.74e-12 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 62.50 E-value: 8.74e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164563740 225 TALALFSPNLLGDPdnftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRGLTFR- 303
Cdd:COG5679 53 IGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQNPFRr 127
|
90
....*....|...
gi 2164563740 304 --PITQILFWTLI 314
Cdd:COG5679 128 pvATAVFLFGTLV 140
|
|
| |
