NCBI Conserved Domain Search

Conserved domains on [gi|2132854029|gb|UEP15764|]

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ATP synthase F0 subunit 8 (mitochondrion) [Panthera spelaea]

Protein Classification

ATP synthase protein 8( domain architecture ID 10009565)

ATP synthase protein 8 is a component of mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

Name

Accession

Description

Interval

E-value

ATP8

MTH00102

ATP synthase F0 subunit 8; Validated

1-67

2.08e-34

ATP synthase F0 subunit 8; Validated

Pssm-ID: 214420 Cd Length: 67 Bit Score: 111.09 E-value: 2.08e-34

                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2132854029  1 MPQLDTSTWFITIISMIMTLFIVFQLKISKHLYLSGPEPKSTAALKQPNPWEKKWTKIYSPLSLPQQ 67
Cdd:MTH00102   1 MPQLDTSTWFITILSMLLTLFIIFQLKISKHNYPLNPEPKSLKTKKQNTPWEKKWTKIYLPLSLPLQ 67

Name

Accession

Description

Interval

E-value

ATP8

MTH00102

ATP synthase F0 subunit 8; Validated

1-67

2.08e-34

ATP synthase F0 subunit 8; Validated

Pssm-ID: 214420 Cd Length: 67 Bit Score: 111.09 E-value: 2.08e-34

                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2132854029  1 MPQLDTSTWFITIISMIMTLFIVFQLKISKHLYLSGPEPKSTAALKQPNPWEKKWTKIYSPLSLPQQ 67
Cdd:MTH00102   1 MPQLDTSTWFITILSMLLTLFIIFQLKISKHNYPLNPEPKSLKTKKQNTPWEKKWTKIYLPLSLPLQ 67

ATP-synt_8

pfam00895

ATP synthase protein 8;

1-55

1.49e-14

ATP synthase protein 8;

Pssm-ID: 459986 Cd Length: 54 Bit Score: 60.82 E-value: 1.49e-14

                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 2132854029  1 MPQLDTSTWFITIISMIMTLFIVFQLKISKHLYLSgPEPKSTAALKQPNPWEKKW 55
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTN-PPPKSLKTTKHPNPWEWKW 54

Name

Accession

Description

Interval

E-value

ATP8

MTH00102

ATP synthase F0 subunit 8; Validated

1-67

2.08e-34

ATP synthase F0 subunit 8; Validated

Pssm-ID: 214420 Cd Length: 67 Bit Score: 111.09 E-value: 2.08e-34

                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2132854029  1 MPQLDTSTWFITIISMIMTLFIVFQLKISKHLYLSGPEPKSTAALKQPNPWEKKWTKIYSPLSLPQQ 67
Cdd:MTH00102   1 MPQLDTSTWFITILSMLLTLFIIFQLKISKHNYPLNPEPKSLKTKKQNTPWEKKWTKIYLPLSLPLQ 67

ATP-synt_8

pfam00895

ATP synthase protein 8;

1-55

1.49e-14

ATP synthase protein 8;

Pssm-ID: 459986 Cd Length: 54 Bit Score: 60.82 E-value: 1.49e-14

                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 2132854029  1 MPQLDTSTWFITIISMIMTLFIVFQLKISKHLYLSgPEPKSTAALKQPNPWEKKW 55
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTN-PPPKSLKTTKHPNPWEWKW 54

ATP8

MTH00072

ATP synthase F0 subunit 8; Provisional

1-56

5.35e-03

ATP synthase F0 subunit 8; Provisional

Pssm-ID: 164642 Cd Length: 54 Bit Score: 31.48 E-value: 5.35e-03

                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 2132854029  1 MPQLDTSTWFITIISMIMTLFIVFQLKISKHLYLSgpEPKSTAALKQPNPWEKKWT 56
Cdd:MTH00072   1 MPQLNPGPWFAIFLMSWLIFLLILPFKISNHKNLN--EPTSQNKKNKPESWNWPWT 54

Blast search parameters

Data Source:	Precalculated data, version = cdd.v.3.21
Preset Options:	Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01