|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-347 |
3.81e-171 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 479.73 E-value: 3.81e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 1 MKPTIMIIISSTIIMGTMMVMMSSHWLLIWIGFEMNMLAIIPVLMKSFNPRAMEASTKYFLTQATASMILMLGIATNLLL 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 81 TGQWTMLNMLNPTASNITTIALAMKLGLAPFHFWVPEVTQGVSMLSGMVLLTWQKIAPLSILYQISPSTNPNLLVTLAIT 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 161 SVLVGGWGGLNQTQLRKILAYSSISHMGWMTAVLMYNPTLMILNLSIYIMMTMGAFLLLILSSSTTTLSLSHTWNKLPLN 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 241 TLLVLTLMLSIGGLPPLSGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRLTYTTTLTMFPSSNNMKMKWQFENS 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....*..
gi 2130418476 321 KMMPLLPPLIILSTMLLPLSPMLTTLH 347
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSILE 347
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
16-346 |
3.15e-129 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 373.37 E-value: 3.15e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 16 GTMMVMMSSHWLLIWIGFEMNMLAIIPVLMKSFNPRAMEASTKYFLTQATASMILMLGIATNLLLTGQWTMLNMLNPTAS 95
Cdd:MTH00135 16 GTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDIQQMSHPLPT 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 96 NITTIALAMKLGLAPFHFWVPEVTQGVSMLSGMVLLTWQKIAPLSILYQISPsTNPNLLVTLAITSVLVGGWGGLNQTQL 175
Cdd:MTH00135 96 TMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAP-TNPTLLITLGLTSTLVGGWGGLNQTQL 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 176 RKILAYSSISHMGWMTAVLMYNPTLMILNLSIYIMMTMGAFLLLILSSSTTTLSLSHTWNKLPLNTLLVLTLMLSIGGLP 255
Cdd:MTH00135 175 RKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALTALTPLILLSLGGLP 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 256 PLSGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRLTYTTTLTMFPSSNNMKMKWQFENSKMMPLLPPLIILSTM 335
Cdd:MTH00135 255 PLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPSTQLTLPLAISTTATLM 334
|
330
....*....|.
gi 2130418476 336 LLPLSPMLTTL 346
Cdd:MTH00135 335 LLPLTPAILAL 345
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
6.08e-117 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 342.19 E-value: 6.08e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 1 MKPTIMIIISSTIIMGTMMVMMSSHWLLIWIGFEMNMLAIIPVLMKSFNPRAMEASTKYFLTQATASMILMLGIATNLLL 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 81 TGQWTMLNMLNPTASNITTIALAMKLGLAPFHFWVPEVTQGVSMLSGMVLLTWQKIAPLSILYQISPSTNPNLLVTLAIT 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 161 SVLVGGWGGLNQTQLRKILAYSSISHMGWMTAVLMYNPTLMILNLSIYIMMTMGAFLLLILSSSTTTLSLSHTWNKLPLN 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 241 TLLVLTLMLSIGGLPPLSGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRLTYTTTLTMFPSSNNMKMKWQFeNS 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRT-KP 319
|
330 340
....*....|....*....|....*.
gi 2130418476 321 KMMPLLPPLIILSTMLLPLSPMLTTL 346
Cdd:MTH00112 320 KKNTLTATLTTLSTLLLPLSPMILTI 345
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.33e-111 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 328.42 E-value: 1.33e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 1 MKPTIMIIISSTIIMGTMMVMMSSHWLLIWIGFEMNMLAIIPVLMKSFNPRAMEASTKYFLTQATASMILMLGIATNLLL 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 81 TGQWTMLNMLNPTASNITTIALAMKLGLAPFHFWVPEVTQGVSMLSGMVLLTWQKIAPLSILYQISPSTNPNLLVTLAIT 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 161 SVLVGGWGGLNQTQLRKILAYSSISHMGWMTAVLMYNPTLMILNLSIYIMMTMGAFLLLILSSSTTTLSLSHTWNKLPLN 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 241 TLLVLTLMLSIGGLPPLSGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRLTYTTTLTMFPSSNNMKMKWQFENs 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKN- 319
|
330 340
....*....|....*....|....*.
gi 2130418476 321 KMMPLLPPLIILSTMLLPLSPMLTTL 346
Cdd:MTH00070 320 KTNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
16-339 |
4.76e-89 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 271.03 E-value: 4.76e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 16 GTMMVMMSSHWLLIWIGFEMNMLAIIPVLMKSFNPRAMEASTKYFLTQATASMILMLGIATNLLLTGQWTMLNMLNPTAS 95
Cdd:MTH00041 16 GTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPLNTLSS 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 96 NITTIALAMKLGLAPFHFWVPEVTQGVSMLSGMVLLTWQKIAPLSILYQISPSTNPNLLVTLAITSVLVGGWGGLNQTQL 175
Cdd:MTH00041 96 IIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGLNQTQT 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 176 RKILAYSSISHMGWMTAVLMYNPTLMILNLSIYIMMTMGAFLLLILSSSTTTLSLSHTWNKLPLNTLLVLTLMLSIGGLP 255
Cdd:MTH00041 176 RKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLP 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 256 PLSGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRLTYTTTLTMFPSSNNMKMKWQFENSK-----MMPLLPPLI 330
Cdd:MTH00041 256 PLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNItvygvILSILSSIS 335
|
....*....
gi 2130418476 331 ILSTMLLPL 339
Cdd:MTH00041 336 ILGLLLIPL 344
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
6.68e-84 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 257.97 E-value: 6.68e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 1 MKPTIMIIISSTIIMGTMMVMMSSHWLLIWIGFEMNMLAIIPVLMKSFNPRAMEASTKYFLTQATASMILMLGIATNLLL 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 81 TGQWTMLNMLNPTASNITTIALAMKLGLAPFHFWVPEVTQGVSMLSGMVLLTWQKIAPLSILYQISPSTNPNLLVTLAIT 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 161 SVLVGGWGGLNQTQLRKILAYSSISHMGWMTAVLMYNPTLMILNLSIYIMMTMGAFLLLILSSSTTTLSLSHTWNKLPLN 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 241 TLLVLTLMLSIGGLPPLSGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRLTYTTTLTMFPSSNNMKMKWQFENS 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 2130418476 321 KmMPLLPPLIILSTMLLPLSPMLTTL 346
Cdd:MTH00200 321 S-NLLVGLLLLLSILGLPLTPQLLFL 345
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
16-343 |
4.98e-53 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 177.71 E-value: 4.98e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 16 GTMMVMMSSHWLLIWIGFEMNMLAIIPVLMKSFNPRAMEASTKYFLTQATASMILMLGIATNLLltgqwtMLNMLNPTAS 95
Cdd:MTH00160 17 GTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML------NLMLFNNISS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 96 NITTIALAMKLGLAPFHFWVPEVTQGVSMLSGMVLLTWQKIAPLSILYQIspsTNPNLLVTLAITSVLVGGWGGLNQTQL 175
Cdd:MTH00160 91 MLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIILSAIIGAIGGLNQTSL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 176 RKILAYSSISHMGWMTAVLMYNPTLMILNLSIYIMMTMGAFLLLILSSSTTTLSLSHTWNKLPLNTLLVLTLMLSIGGLP 255
Cdd:MTH00160 168 RKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLP 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 256 PLSGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRLTYTttlTMFPSSNNMKMKWQFENSKMMPLLPPLIILSTM 335
Cdd:MTH00160 248 PFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYS---SLMLNYNKNKWNLKKKKNKFSLILNFLSFISLF 324
|
....*...
gi 2130418476 336 LLPLSPML 343
Cdd:MTH00160 325 GLILSSLL 332
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
16-336 |
1.19e-52 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 176.62 E-value: 1.19e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 16 GTMMVMMSSHWLLIWIGFEMNMLAIIPVLMKSFNPRAMEASTKYFLTQATASMILMLGIATNLLLTGQWTMLNMLnptas 95
Cdd:MTH00144 16 GTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSMSLL----- 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 96 nitTIALAMKLGLAPFHFWVPEVTQGVSMLSGMVLLTWQKIAPLSILYQISPSTNP-NLLVTLAITSVLVGGWGGLNQTQ 174
Cdd:MTH00144 91 ---LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSALVGSIGGLNQTQ 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 175 LRKILAYSSISHMGWMTAVLMYNPTLMILNLSIYIMMTMGAFLLLILSSSTTTLSLSHTwNKLPLNTLLVLTLMLSIGGL 254
Cdd:MTH00144 168 VRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSL-KPSYKTGLSIISLLLSLGGL 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 255 PPLSGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRLTYTTTLTMFPSSNNMKMKWQFENSKMMPLLPPLIILST 334
Cdd:MTH00144 247 PPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKVLNSSIISLNLLGGLLFLLL 326
|
..
gi 2130418476 335 ML 336
Cdd:MTH00144 327 YL 328
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
16-304 |
3.18e-46 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 159.95 E-value: 3.18e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 16 GTMMVMMSSHWLLIWIGFEMNMLAIIPVLMKSFNPRAMEASTKYFLTQATASMILMLGiatnllLTGQWTMLNMLNPTAS 95
Cdd:MTH00011 18 GTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLG------MTMMWSFPSLLKNITA 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 96 NITTIALAMKLGLAPFHFWVPEVTQGVSMLSGMVLLTWQKIAPLSILYQISPSTNPNLLVTLAITSVLVGGWGGLNQTQL 175
Cdd:MTH00011 92 LMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMNQTQL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 176 RKILAYSSISHMGWMTAVLMYNPTLMILNLSIYIMMTMGAFLLLILSSSTTTLSLSHTWNKLPLNTLLVLTLMLSIGGLP 255
Cdd:MTH00011 172 RPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSLGGLP 251
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2130418476 256 PLSGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRLTYTTTLTM 304
Cdd:MTH00011 252 PFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLS 300
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
16-346 |
1.61e-44 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 155.22 E-value: 1.61e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 16 GTMMVMMSSHWLLIWIGFEMNMLAIIPVLMKSFNPRAMEASTKYFLTQATASMILMLGIATNLLLTGQWTMLNMLnptas 95
Cdd:MTH00197 10 GVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNLYLSLLSVVL----- 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 96 niTTIALAMKLGLAPFHFWVPEVTQGVSMLSGMVLLTWQKIAPLSILYQISpsTNPNLLVTLAITSVLVGGWGGLNQTQL 175
Cdd:MTH00197 85 --VILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNS--SSFMGLLICSVLSSLIGGIGGMNQSNI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 176 RKILAYSSISHMGWMTAVLMYNPTLMILNLSIYIMMTMGAFLLLILSSSTTTLSLSHTWNKLPLNTLLVLTLMLSIGGLP 255
Cdd:MTH00197 161 RQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 256 PLSGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRLTYTTtltmFPSSNNMKMKwqfeNSKMMPLLPPLIILSTM 335
Cdd:MTH00197 241 PLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKS----LILSNWMINF----LMKINLLYSGLFILLMM 312
|
330
....*....|.
gi 2130418476 336 LLPLSPMLTTL 346
Cdd:MTH00197 313 MLPLLMIFTMI 323
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
18-296 |
1.69e-29 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 117.91 E-value: 1.69e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 18 MMVMMSS-HWLLIWIGFEMNMLAI-IPVLMKSFNPRAMEASTKYFLTQATASMILMLGIA--------TNLLLTGQWTML 87
Cdd:COG1007 115 MMLMASAnDLLTLFLGLELLSLSLyVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISllygatgsLNLAGIAAALAA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 88 NMLNPTASNI----TTIALAMKLGLAPFHFWVPEVTQGVSMLSGMVLLTWQKIAPLSILYQISPSTNPNL-------LVT 156
Cdd:COG1007 195 GGANSPLLLLglvlVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFPGLaadwqllLAV 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 157 LAITSVLVGGWGGLNQTQLRKILAYSSISHMGWMTAVLMYNPTL----MILNLSIYIMMTMGAFLLLILSSSTTTLSlsH 232
Cdd:COG1007 275 LAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLgvsaALFYLLAYLFMNLGAFAVILLLSRKGGEA--E 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2130418476 233 TWNKL-------PLNTLLVLTLMLSIGGLPPLSGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRL 296
Cdd:COG1007 353 EIEDLaglarrsPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRV 423
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-278 |
7.01e-27 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 107.40 E-value: 7.01e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 23 SSHWLLIWIGFEMNMLAIIP-VLMKSFNPRAMEASTKYFLTQATASMILMLGIATNLLLTGQW---TMLNMLNPTASNIT 98
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLlIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLsfdELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 99 --------TIALAMKLGLAPFHFWVPEVTQGVSMLSGMVLL-TWQKIAPLSI-----LYQISPSTNPNLLVTLAITSVLV 164
Cdd:pfam00361 81 llllflliLVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGYGLirrslLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 165 GGWGGLNQTQLRKILAYSSISHMGWMTAVLM----YNPTLMILNLSIYIMMTMGAFLLLILSSSTTT-----LSLSHTWN 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGagtiYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVhtrniRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 2130418476 236 KLPLNTLLVLTLMLSIGGLPPLSGFMPKWMIIQELTKNDLIIL 278
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFL 283
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
16-267 |
2.34e-26 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 108.95 E-value: 2.34e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 16 GTMMVMMSSHWLLIWIGFEMNMLAI-IPVLMKSFNPRAMEASTKYFLTQATASMILMLGIATNLLLTGQWTMLNMLNPTA 94
Cdd:MTH00199 109 GSLLLVSSINWLSIYLAIELQTLTLfILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGINSILT 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 95 SNI----TTIALAMKLGLAPFHFWVPEVTQGVSMLSGMVLLTWQKIAPLSILYQISPSTnpNLLVTLAITSVLVGGWGGL 170
Cdd:MTH00199 189 GDVgkilITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVT--NVVLICAVLSIIYGAIGAL 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 171 NQTQLRKILAYSSISHMGW------------MTAVLMYnptlMIlnlsIYIMMTMGAFLLLILSSSTTTLS--LSHTWNK 236
Cdd:MTH00199 267 NQTKIKRLLAYSGIGHMGFilfgvaigsfesIQASLIY----MI----IYVIMSICSFSIILSLKLTKGLIveVSGLSRK 338
|
250 260 270
....*....|....*....|....*....|.
gi 2130418476 237 LPLNTLLVLTLMLSIGGLPPLSGFMPKWMII 267
Cdd:MTH00199 339 NPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
16-296 |
2.60e-26 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 107.42 E-value: 2.60e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 16 GTMMVMMSSHWLLIWIGFEMNMLAI-IPVLMKSFNPRAMEASTKYFLTQATASMILMLGIA-------------TNLLLT 81
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLfILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCAllcgttgglhlsyINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 82 GQWTMLNMLNPTASNITTIALAMKLGLAPFHFWVPEVTQGVSMLSGMVLLTWQKIAPLSILYQISPstNPNLLVTLAITS 161
Cdd:MTH00196 85 SGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGL--NVNILLIGGLFS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 162 VLVGGWGGLNQTQLRKILAYSSISHMGWMTAVLMYNPTLMI----LNLSIYIMMTMGAFLLLILSSSTTTLSLSHT--WN 235
Cdd:MTH00196 163 LFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIqaslVYLFIYIIMSICVFSIILALNVYKNLIIEFSglSR 242
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2130418476 236 KLPLNTLLVLTLMLSIGGLPPLSGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRL 296
Cdd:MTH00196 243 RLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
18-296 |
3.53e-26 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 108.37 E-value: 3.53e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 18 MMVMMSS-HWLLIWIGFEMNMLAI-IPVLMKSFNPRAMEASTKYFLTQATASMILMLGIATNLLLTGQWTMLNMLNPTAS 95
Cdd:PRK05777 116 MMVMVSAnDLLTLFLGLELLSLPLyALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALAD 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 96 NITT------------IALAMKLGLAPFHFWVPEVTQG-----------VSMLSGMVLLtwqkiapLSILYQISPSTNP- 151
Cdd:PRK05777 196 GSGNsllllfglvfllVGLAFKLSAVPFHMWTPDVYEGaptpvtaflatAPKIAAFAVL-------LRLLVVAFGGLSEd 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 152 --NLLVTLAITSVLVGGWGGLNQTQLRKILAYSSISHMGWMTAVLMYNPTL----MILNLSIYIMMTMGAFLLLILSSST 225
Cdd:PRK05777 269 wqQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEgysaVLFYLLAYLFMTLGAFGVISLLRRK 348
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2130418476 226 TTLS-LSHTWNKL----PLNTLLVLTLMLSIGGLPPLSGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRL 296
Cdd:PRK05777 349 GGEAeSISDFAGLskrsPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
18-296 |
2.14e-25 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 106.19 E-value: 2.14e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 18 MMVMMSS-HWLLIWIGFEMNMLAIIpVLMKSF--NPRAMEASTKYFLTQATASMILMLGIATNLLLTGQW------TMLN 88
Cdd:TIGR01770 115 IFLLVSSnDLLSIYLGLELQSLCFY-VLAGLKrkSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLnfedllLFLS 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 89 MLNPTASNITT------IALAMKLGLAPFHFWVPEVTQGVSMLSGMVLLTWQKIAPLSILYQISPS-------TNPNLLV 155
Cdd:TIGR01770 194 NGMLNISLLLLgivlilVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYilfgfseAWQIFLA 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 156 TLAITSVLVGGWGGLNQTQLRKILAYSSISHMGW-MTAVLMYNPTLM---ILNLSIYIMMTMGAFlLLILSSSTTTLSLS 231
Cdd:TIGR01770 274 IIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYiLIGLLAGTLEGIkavLFYIFIYALMSLGAF-GVLSLLRSYKDEWI 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2130418476 232 HTWNKL-------PLNTLLVLTLMLSIGGLPPLSGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRL 296
Cdd:TIGR01770 353 EYISDFaglfktnPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRV 424
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
16-300 |
3.01e-20 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 90.98 E-value: 3.01e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 16 GTMMVMMSSHWLLIWIGFEMNMLAIIPVLMKSFNPRAMEASTKYFLTQATASMILMLGIATNLLLTGQWTMLNM------ 89
Cdd:COG0651 119 GMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarlae 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 90 LNPTASNI----TTIALAMKLGLAPFHFWVPEV----TQGVS-MLSGMVLltwqKIAPLSIL---YQISPSTNPN----L 153
Cdd:COG0651 199 LDPGLLLAafalLLVGFGIKAALFPLHFWLPDAypaaPSPVSaLLSGLLT----KVGVYAILrvlTLLFGADPALflgtL 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 154 LVTLAITSVLVGGWGGLNQTQLRKILAYSSISHMGWMTAVL-MYNPTLM------ILNLSIY-IMMTMGAFLLLILSSST 225
Cdd:COG0651 275 LLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLgLGTPLGLagalfhLLNHALAkALLFLAAGAIERATGTR 354
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2130418476 226 TTLSLSHTWNKLPLNTLLVLTLMLSIGGLPPLSGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRLTYTT 300
Cdd:COG0651 355 DLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-296 |
3.01e-15 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 76.58 E-value: 3.01e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 51 RAMEASTKYFLTQATASMILMLGIATNLLLTGQWTML----------NMLNPTASNI----TTIALAMKLGLAPFHFWVP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGFSWLYGLSGGEIELqeivnglintQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 117 EVTQG-----VSMLS------GMVLLTwqKIapLSILYQISPSTNPNLLVTLAITSVLVGGWGGLNQTQLRKILAYSSIS 185
Cdd:CHL00049 239 DVYEGsptpvVAFLSvtskvaASALAT--RI--FDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 186 HMGW-MTAVLMYNP----TLMILNLSIYIMMTMGAFLLLILSSSTTTLSLSHTWNKL----PLNTLLVLTLMLSIGGLPP 256
Cdd:CHL00049 315 QIGYvIIGIIVGDSndgyASMITYMLFYIFMNLGTFACIVLFGLRTGTDNIRDYAGLytkdPFLALSLALCLLSLGGIPP 394
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 2130418476 257 LSGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRL 296
Cdd:CHL00049 395 LAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKI 434
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
16-267 |
3.52e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 76.44 E-value: 3.52e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 16 GTMMVMMSSHWLLIWIGFEMNMLAIIPVLMKSFNPRAM---------EASTKYFLTQATASMILMLGIATNLLLTGQWTM 86
Cdd:MTH00198 200 GGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNEGM 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 87 L-NMLNPT--ASNI-----------TTIALAMKLGLAPFHFWVPEVTQGVSMLSGMVLLTWQKIAPLSILYQISPSTNpn 152
Cdd:MTH00198 280 LgTILSATleTTNIelrqgslgylfITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSLVITSK-- 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 153 LLVTLAITSVLVGGWGGLNQTQLRKILAYSSISHMGWMTaVLMYNPTLMILNLS-----IYIMMTMGAFLLLILSSSTTT 227
Cdd:MTH00198 358 LLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFIL-IGVSAGTYESLQASwtyavTYLVSALASFTVICTLEEFGT 436
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2130418476 228 LSLSHT------WNKLPLNTLLVLTLM---------------LSIGGLPPLSGFMPKWMII 267
Cdd:MTH00198 437 RTPTSRqrdgsfGNYNLVRRLVDLTILsrgqpyiafslaivfLSLAGIPPLLGFLGKWFIL 497
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
16-295 |
1.07e-14 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 74.70 E-value: 1.07e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 16 GTMMVMMSSHWLLIWIGFEMnmLAIIPVLMKSF---NPRAMEASTKYFLTQATASMILMLGIATNLLLTGQWTMLNMLNP 92
Cdd:PRK02504 122 GGMFLSGATELVMIFISLET--LSIASYLLTGYmkrDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGSTQLSAIAL 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 93 TASNITTIALAM-----------KLGLAPFHFWVPEVTQG-----VSMLS------GMVLltwqkiaPLSILYQISPSTN 150
Cdd:PRK02504 200 ALITSPSLGLALalvfviagiafKISAVPFHQWTPDVYEGsptpvVAFLSvgskaaGFAL-------AIRLLVTAFPSFD 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 151 PN---LLVTLAITSVLVGGWGGLNQTQLRKILAYSSISHMGWMTAVLMYNP----TLMILNLSIYIMMTMGAFLLLILSS 223
Cdd:PRK02504 273 EQwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagyASMVFYLLAYLFMNLGAFACVILFS 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2130418476 224 STT----TLSLSHTWNKLPLNTLLVLTLMLSIGGLPPLSGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMR 295
Cdd:PRK02504 353 LRTgtdqISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISIYYYIR 428
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-341 |
1.19e-12 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 61.89 E-value: 1.19e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2130418476 291 YFYMRLTYTTTLTMFPSSNNMKMKWQFENSKMMPLLPPLIILSTMLLPLSP 341
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLPTLTTLSILLLPLTP 51
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-266 |
2.40e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 67.81 E-value: 2.40e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 50 PRAMEASTKYFLTQATASMILMLGIAtnlLLTGQWTMLNM--------LNPTASNITTIA-----LAMKLGLAPFHFWVP 116
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIA---LLYGQYGTLNMaylavkmsENPTVVAKIALAlfiagLAMKSGAVPVHMWLP 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 117 EV-TQGVSMLSGMVLLTwqKIAPLSILY---------QISPSTNPNLLVTLAITSVLVGGWGGLNQTQLRKILAYSSISH 186
Cdd:PRK08376 245 DAyPAAPSSISAMLLVI--KQAGLYALArvlfsiygpAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQ 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 187 MGWM-----TAVLMYNPTLM------ILNLSIYIMMTMGAFLLLILSSSTTTLSLSHTWN---------KLPLNTLLVLT 246
Cdd:PRK08376 323 IGYMllglgVGLAALGDPAMasygeiALAGGIYHIVNHALYKALLFLTAGAVIYETGTRNlnelgglarTMPKTTIAFLI 402
|
250 260
....*....|....*....|
gi 2130418476 247 LMLSIGGLPPLSGFMPKWMI 266
Cdd:PRK08376 403 GAAAIVGLPPFNGFASKWLI 422
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-298 |
1.74e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 61.82 E-value: 1.74e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 49 NPRAMEASTKYFLTQATASMILMLGIATNLLLTGQwtmLNM------LNP-----TASNITTIALAMKLGLAPFHFWVPE 117
Cdd:PRK08375 151 DRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGT---LNMadlagaLAEnptvvTAFGFVLLALALKAAVFPLHTWLPR 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 118 ---VTQGVSMLSGMVLLTwqKIAPLSIL------YQISPSTNPNL---LVTLAITSVLVGGWGGLNQTQLRKILAYSSIS 185
Cdd:PRK08375 228 aypAAPPVVTALLSGLVT--KVAVYALIriyftvFGGDFRFALGLgwlLAVLALLSMLVGSLAALGQDDVKRVLAYSTVS 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 186 HMGWMTAVLMYNPTLMILNLSIYI---MMTMGA-FLLLILSSSTTTLSLSHTWNKL----PLNTLLVLTLMLSIGGLPPL 257
Cdd:PRK08375 306 QMGYILLGLALLTPLALAAGLLHLlhhALMKGAlFLAAGAIEVTYGTRRLSELSGLgrrmPLTAAAFAVASLSLIGVPPT 385
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 2130418476 258 SGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRLTY 298
Cdd:PRK08375 386 SGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-268 |
2.82e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 61.11 E-value: 2.82e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 50 PRAMEASTKYFLTQATASMILMLGIATNLLLTGQWTMLNMLNPTASNITT---------IALAMKLGLAPFHFWVPEV-- 118
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFDLLELLNLPLPFGVqtwlflaffIAFAVKVPLFPLHTWLPDAhv 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 119 ---TQGVSMLSGMVLltwqKIAP---LSILYQISPSTN---PNLLVTLAITSVLVGGWGGLNQTQLRKILAYSSISHMGW 189
Cdd:TIGR01972 232 eapTAGSVILAGVLL----KMGTygfLRFNLPLFPDASlyfAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGF 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 190 MTaVLMYNPTLMILNLSIYIMMTMGAFLLLILSSSTTTLSLSHT---------WNKLPLNTLLVLTLMLSIGGLPPLSGF 260
Cdd:TIGR01972 308 VL-LGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTrdiakygglANKMPVLAAFFMLFAMASLGLPGTSGF 386
|
....*...
gi 2130418476 261 MPKWMIIQ 268
Cdd:TIGR01972 387 VGEFLILL 394
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
50-192 |
4.30e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 60.48 E-value: 4.30e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 50 PRAMEASTKYFLTQATASMILMLGIATNLLLTGQWTMlNMLNPTASNITT-----------IALAMKLGLAPFHFWVP-- 116
Cdd:COG1008 157 ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLtaqlllflaffIAFAVKVPMFPFHTWLPda 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 117 --EVTQGVSMLSGMVLLtwqKIAP---LSILYQISP---STNPNLLVTLAITSVLVGGWGGLNQTQLRKILAYSSISHMG 188
Cdd:COG1008 236 hvEAPTAGSVLLAGVLL---KMGGyglLRFALPLFPeasAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMG 312
|
....
gi 2130418476 189 WMTA 192
Cdd:COG1008 313 FVLL 316
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-299 |
4.35e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 57.67 E-value: 4.35e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 50 PRAMEASTKYFLTQATASMILMLGIAtnlLLTGQWTMLNMLNPTASN------------------------ITTIALAMK 105
Cdd:PRK12667 160 GDAVEAAIKYALIGAVGTTLYFLALA---FLYATFGTLNMADLSAKIrglsfpltgglagnpplalgvalaLALWAFTIK 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 106 LGLAPFHFWVPEV-----TQGVSMLSGMVLLT--WQKIAPLSILYQISPSTNP------NLLVTLAITSVLVGGWGGLNQ 172
Cdd:PRK12667 237 AAIFPNHFWLPDAhpaapSPVSAMLSGLVVNVgaYAIIRFLYTIFGISPSLIDfraalsPILIILGAVSAIIGALMMVVQ 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 173 TQLRKILAYSSISHMGWM-------TAVLMYNPTLMILNLSI---YIMMTMGAFLLLILSSSTTTLSLSHtwNKLPLNTL 242
Cdd:PRK12667 317 KDVKRLLAYSTISHMGYIfmgigigTQLGLAAALFHIINHAIaksLLFLASGVFIHAAGTRDIDELAGLG--RKMPIASF 394
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2130418476 243 LVLTLMLSIGGLPPLSGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRLTYT 299
Cdd:PRK12667 395 AFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYS 451
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
49-300 |
2.23e-08 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 55.54 E-value: 2.23e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 49 NPRAMEASTKYFLTQATASMILMLGIATNLLLTGQWTMLNMLNPTASN-----ITTIALAM------KLGLAPFHFWVPE 117
Cdd:COG1009 157 KPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIlssplLTLILLLLllgafgKSAQFPLHFWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 118 -----------------VTQGVSMLsgmvlltwqkiAPLSILYQISPSTNPNLLVTLAITSvLVGGWGGLNQTQLRKILA 180
Cdd:COG1009 237 amegptpvsallhaatmVKAGVYLL-----------ARLSPLFALSPVWLTVVAIIGAITA-LFAALIALAQTDIKRVLA 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 181 YSSISHMGWMTAVLmynpTLMILNLSIYIMMTMGAFLLLILSSSTTTLSLSHT---------WNKLPLNTLLVLTLMLSI 251
Cdd:COG1009 305 YSTVSQLGYMFLAL----GVGAYVAALFHLLTHAFFKALLFLGAGSVIHATGTrdirkmgglRKKMPITAITFLIGALSL 380
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2130418476 252 GGLPPLSGFMPKWMIIQELTKNDL--IILPTLMAMTALLNLYFYMRLTYTT 300
Cdd:COG1009 381 AGIPPFAGFFSKEAILEAALEAGGlgPLLLAVALLGAFLTAFYSFRLFFLV 431
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-188 |
5.54e-08 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 54.27 E-value: 5.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 55 ASTKYFLTQATASM-ILMLGIAtnLLLTGQWTMLNMLNPTASNITT-----------IALAMKLGLAPFHFWVP----EV 118
Cdd:PRK12561 138 AATKFILYTALASIfILVAGLA--LALSGDTFTFDLAELGAKSYPLalelllyagflIAFGVKLPIFPLHTWLPdahgEA 215
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2130418476 119 TQGVSMLSGMVLLTWQKIAPLSILYQISPSTNPNL---LVTLAITSVLVGGWGGLNQTQLRKILAYSSISHMG 188
Cdd:PRK12561 216 SAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFapaLAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMG 288
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
53-296 |
1.46e-07 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 53.03 E-value: 1.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 53 MEASTKYFLTQATASMILMLGIAtnlLLTGQWTMLNMLN--------------PTASNITTIALAMKLGLAPFhFWVPEV 118
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLLGIG---LLYGTFGTLNMAHiamrlndmgdtatlTTIALLFLLAFGMKAALFPF-MWLPAA 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 119 TQ----GVSMLSGmVLLTWQKIAPL----SILYQISPSTNPNLLVTLAITSVLVGGWGGLNQTQLRKILAYSSISHMGWM 190
Cdd:PRK12663 233 YHtpntEVAALFA-ALLTKVGIYALirvfTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFI 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 191 TAVLMYNpTLMILNLSIY----IMMTMGA-FLLLILSSSTTTLSLSHTWNKL----PLNTLLVLTLMLSIGGLPPLSGFM 261
Cdd:PRK12663 312 LLGLALG-TPAGINGAIFylvhDMVVKTAlFLIAGSLVRLTGYRSLQYLGGLyrkePLFGALFLILIFAIGGLPPFSGFW 390
|
250 260 270
....*....|....*....|....*....|....*
gi 2130418476 262 PKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRL 296
Cdd:PRK12663 391 GKVLLVQGALDNGAYILLALMLITSLITMYSLFRI 425
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
16-337 |
2.63e-07 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 52.31 E-value: 2.63e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 16 GTMMVMMSSHWLLIWIGFEMNMLA---IIPVLMKsfnpRAMEASTKYFLTQATASMILMLGIATNLLLTGQWT---MLNM 89
Cdd:PRK08668 110 GVLGVFLANDLLTLYIFWEIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDfadISQG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 90 LNPTASNITTIALAM--------KLGLAPFHFWVPEVTQG-----VSMLSG-------------MVLLTWQKIAPLSILY 143
Cdd:PRK08668 186 LINDTSTGFALIVFLfllafgvaKAGIFPLHVWAPDAYSEapqsfSAVLSGqlsklgaygfllvLYVLPGTKLFSEFGTY 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 144 QISPSTNpNLLVTLAITSVLVGGWGGLNQTQLRKILAYSSISHMGW-------MTAVLMYNPTLMILNLSIY-IMMTMGA 215
Cdd:PRK08668 266 RGVPLFN-YILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYilvglglGTSLGFAGGLFHVFNHALFkGLFFLIF 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 216 FLLLILSSSTTTLSLSHTWNKLPLNTLLVLTLMLSIGGLPPLSGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMR 295
Cdd:PRK08668 345 AAVIYRTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFR 424
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2130418476 296 LTYTTTLTMFPSsnnmkmkwQFENSKM--MPLLPPLIILSTMLL 337
Cdd:PRK08668 425 PLAGVFLGQLPS--------DHKDVKEapLPMLIPMAILVLLNV 460
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
100-298 |
4.35e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 48.38 E-value: 4.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 100 IALAMKLGLAPFHFWVP----EVTQGVSMLSGMVLLTWQKIAPLSILYQISPSTNPNL---LVTLAITSVLVGGWGGLNQ 172
Cdd:MTH00226 238 LAMAVKIPIFPFHIWLPkahvEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLapaVIAMGIVGIVYGSFATCRQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 173 TQLRKILAYSSISHMGwMTAVLMYNPTLMILNLSIYIMMTMGAFLLLILSSSTTTLSLSHTW---------NKLPLNTLL 243
Cdd:MTH00226 318 IDVKRLVAYSSVAHMG-LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRlikyyrglsITMPIWGTI 396
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 2130418476 244 VLTLMLSIGGLPPLSGFMPKWM-IIQELTKNDLI--ILPTLMAMTALLNLYFYMRLTY 298
Cdd:MTH00226 397 MIVTSLANVAVPPSGNFIGEYLsILSSFNWNPIIgvFVCSGVILSAVYSFYFANRVTF 454
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
18-298 |
6.28e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 47.72 E-value: 6.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 18 MMVMMSSHWLLIWIGFEMNMLAIIPVLMKSFNPRAMEASTKYFLTQATASMILMLGIATNLLLTGQWTMLNMLNPTASNI 97
Cdd:PRK06277 114 SAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNALLVNP 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 98 TT----IALAMKL-------GLAPFHFWVPEVTQGVSMLSGMVLLTWQKIAPLSILYQI-----SPSTNPN---LLVTLA 158
Cdd:PRK06277 194 TSpviyGGLLLLIfgllygsGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgGLSYFPSaqgVLIALS 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 159 ITSVLVGGWGGLNQTQLRKILAYSSISHMGWMTAVLMYNPTLMI-------LNLSIYI-MMTMGAFLLLILSSSTTTLSL 230
Cdd:PRK06277 274 VLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIvagifhaINHVIYKsALFLGAGIVSYRTKTSNLRKL 353
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2130418476 231 SHTWNKLPLNTLLVLTLMLSIGGLPPLSGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRLTY 298
Cdd:PRK06277 354 GGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY 421
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
100-191 |
1.17e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 46.73 E-value: 1.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 100 IALAMKLGLAPFHFWVPEV-----TQGVSMLSGMVLltwqKIAP---LSILYQISPSTNPN---LLVTLAITSVLVGGWG 168
Cdd:PRK05846 219 IAFAVKMPMFPLHTWLPDAhvqapTAGSVLLAGILL----KMGAyglLRFSLPLFPDASHEfapIIITLGVIAIIYGALV 294
|
90 100
....*....|....*....|...
gi 2130418476 169 GLNQTQLRKILAYSSISHMGWMT 191
Cdd:PRK05846 295 ALAQTDIKKLIAYSSISHMGFVT 317
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
52-332 |
1.42e-05 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 46.68 E-value: 1.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 52 AMEASTKYFLTQATASMILMLGIAtnlLLTGQWTMLNML---------NPTASNI----TTIALAMKLGLAPFHFWVPEV 118
Cdd:PRK08377 156 AAEASMKYIVLGGIGSSFFLIGVA---LIYGATGTLNMAhiaqlagtiDPTVAQVglalLIFGLAVEAELFPLNAWAPDA 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 119 TQGV-----SMLSGMVLLTwQKIAPLSILYQISP----STNPNLLVTLAITSVLVGGWGGLNQTQLRKILAYSSISHMGW 189
Cdd:PRK08377 233 YQAAphpitVMFSAFVVKA-GLYAMARILYLMQNangwSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGM 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 190 MTAVLMYNPTL--------MILNLSIYIMMTMGAFLLLILSSSTTTLSLSHTWNKLPLNTLLVLTLMLSIGGLPPLSGFM 261
Cdd:PRK08377 312 IALALALGTQAgvdagvfhMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFW 391
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2130418476 262 PKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRLTYtttlTMFPSSNNMKMKWQFENSKMMPLLPPLIIL 332
Cdd:PRK08377 392 SKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRLIH----TMWFKGEGERIRENAAIGIILLLLAALIVV 458
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
17-191 |
2.80e-05 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 45.69 E-value: 2.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 17 TM-MVMMSSHWLLIWIGFEMNMLAiiPVLMKSF--NPRAMEASTKYFL------TQATASMILMLGIATNLLLTGQ---- 83
Cdd:PRK06458 120 TMlLALTSNNLGLMWVAIEATTLS--SALLVGIyrTRASLEAAWKYIIicsvgvAFALFGTILVYANAATVMGDGEmail 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 84 WTMLN----MLNPTasnITTIALAM-------KLGLAPFHFWVP----EVTQGVS-MLSGMVLltwqKIAPLSIL--YQI 145
Cdd:PRK06458 198 WTELLkhasLLDPT---LMKLAFVFlligfgtKVGLFPMHAWLPdahsEAPSPVSaLLSGVLL----NVALYAVLryYIL 270
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2130418476 146 ---SPSTNP--NLLVTLAITSVLVGGWGGLNQTQLRKILAYSSISHMGWMT 191
Cdd:PRK06458 271 idaAIGSDFpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIA 321
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
69-194 |
3.15e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 45.69 E-value: 3.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 69 ILMLGIATnllltGQWTMLNML-NPTASNITTIALAM-------KLGLAPFHFWVPEVTQGVSMLSG------MVLLTWQ 134
Cdd:PRK12644 177 IIILGQAA-----GTYRLSELLaDPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAylhaaaMVKAGIY 251
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 135 KIAPLSILYQISPSTNPnLLVTLAITSVLVGGWGGLNQTQLRKILAYSSISHMGWMTAVL 194
Cdd:PRK12644 252 LVARLAPGFADVPVWRP-TVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLV 310
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
100-190 |
5.53e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 44.69 E-value: 5.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 100 IALAMKLGLAPFHFWVP----EVTQGVSMLSGMVLLTWQKIAPLSILYQISPSTNPNL---LVTLAITSVLVGGWGGLNQ 172
Cdd:PRK06473 213 VGFGIKIPLVPFHTWLPdahvEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLapwLATWAVVSVLYGASCAIAQ 292
|
90
....*....|....*...
gi 2130418476 173 TQLRKILAYSSISHMGWM 190
Cdd:PRK06473 293 KDMKKMVAYSSIGHMGYI 310
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
18-339 |
6.05e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 44.72 E-value: 6.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 18 MMVMMSSHWLLIWIGFE-MNMLAIIPVLMKSFNPRAMEASTKYFLTQATASMILMLGIATNLLLTGQWTmLNMLNPTASN 96
Cdd:PRK08667 125 LGVVASANTFSFLFFWEiMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFE-LSPLGASAGI 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 97 ITT------IALAMKLGLAPFHFWVPEV----TQGVSML-SGMVLltwqKIAPLSILYQISPSTNPNL-----LVTLAIT 160
Cdd:PRK08667 204 LSLvflllfLGFGIKAGIIPFHKWLPYAhpasPSNVSALmSGVML----KVAVYGLVRFLMDVLSPELwwgvlILLAGSI 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 161 SVLVGGWGGLNQTQLRKILAYSSISHMG--------WMTAVLMYNPTLMILNL--SIYIMMTMGAFLLLILSSSTTTLSL 230
Cdd:PRK08667 280 SALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVYGLDTLALLALggALFHSLNHALFKSLLFLTAGSVVHA 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 231 SHTWN---------KLPLNTLLVLTLMLSIGGLPPLSGFMPKWMIIQE----------LTKNDLIILPTLMAMTALLNLY 291
Cdd:PRK08667 360 TGTRNiekmgglvkLMPYTSALFLVGAVSIAALPPFNGFASELLLYESffqsfsvadpLIKILLFSVLAIFALTSALAAA 439
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 2130418476 292 FYMRLTYTTTLTMFPSSNNMKMKwqfENSKMMPLLPPLIILSTMLLPL 339
Cdd:PRK08667 440 CFVKAFGITFLAMPRSQEARSAK---EVSKPMLIGPAVLAVACLVLGL 484
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
100-255 |
1.40e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 43.50 E-value: 1.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 100 IALAMKLGLAPFHFWVPEV-----TQGVSMLSGMVL---------LTWqkiaplSILYQISPSTNPnLLVTLAITSVLVG 165
Cdd:MTH00217 214 LSLAIKIPKIPFHIWLPQAhveapVAGSVILAGVLLklggygfirFSW------PLLPEASEYFSP-LIQTLSLLAIIYG 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 166 GWGGLNQTQLRKILAYSSISHMGWMTAVLmYNPTLMILNLSIYIMMTMGAFLLLILSSSTTTLSLSHT---------WNK 236
Cdd:MTH00217 287 SLTTCRQVDLKRIIAYSSVAHMGLVTLGI-FSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTrlikyyrgmVIT 365
|
170
....*....|....*....
gi 2130418476 237 LPLNTLLVLTLMLSIGGLP 255
Cdd:MTH00217 366 MPLFGILMLLLVLANASIP 384
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
17-190 |
1.62e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 43.20 E-value: 1.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 17 TMMVMMSSHWLLIWIGFEMNMLaIIPVLMKSFNPRA-MEASTKYFLTQATASMILMLGIATNLLLTGQ--------WTML 87
Cdd:PRK08676 115 ITFAFFSDNLALFWIFAELTTV-FSAMLIAILSAREnIDAALKYIFIASTAMIFAFIGLIFLFSLTRQalgtgtlnWTEL 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 88 NMLNPTASNITT--------IALAMKLGLAPFHFWVPEV-TQGVSMLSGMVLLTWQKIAPLSILYQIS-------PSTNP 151
Cdd:PRK08676 194 AAHASLLSPSVLgasflfifIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAEQFS 273
|
170 180 190
....*....|....*....|....*....|....*....
gi 2130418476 152 NLLVTLAITSVLVGGWGGLNQTQLRKILAYSSISHMGWM 190
Cdd:PRK08676 274 NVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLM 312
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-296 |
2.31e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 43.01 E-value: 2.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 56 STKYFLTQATASMILMLGIATNLLLTGQWTM------LNMLNPTASN-ITTIAL------AMKLGLAPFHFWVPEVTQG- 121
Cdd:PRK07691 160 SIKYVLINVVSSAFFVVAVAILYSVVGTLNMadisvkIAELSAGQTGlITVVAIlflfvfATKAGLFPLYFWLPGSYYAp 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 122 ---VSMLSGmVLLT----WQKIAPLSILYQISPSTNPNLLVTLAITSVLVGGWGGLNQTQLRKILAYSSISHMGWMTA-V 193
Cdd:PRK07691 240 piaIAALFG-ALLTkvgvYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVgV 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 194 LMYNPTLMI--LNLSIYIMMTMGA-FLLLILSSSTTTLSLSHTWNKL----PLNTLLVLTLMLSIGGLPPLSGFMPKWMI 266
Cdd:PRK07691 319 AMMTESGMIgaIYYLIHDMIVKAAlFLLIGIMIKITGTTDLKKMGGLikryPVLGWMFFIAALSLAGIPPLSGFYGKFFI 398
|
250 260 270
....*....|....*....|....*....|
gi 2130418476 267 IQELTKNDLIILPTLMAMTALLNLYFYMRL 296
Cdd:PRK07691 399 VEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
100-189 |
3.47e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 42.39 E-value: 3.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 100 IALAMKLGLAPFHFWVP----EVTQGVSMLSGMVLLTWQKIAPLSILYQISPSTNPN---LLVTLAITSVLVGGWGGLNQ 172
Cdd:PRK02546 221 IAYGVKLPIVPLHTWLPdahgEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQfapLLIVLGVVNIIYAALTSFAQ 300
|
90
....*....|....*..
gi 2130418476 173 TQLRKILAYSSISHMGW 189
Cdd:PRK02546 301 RNLKRKIAYSSISHMGF 317
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
55-191 |
6.18e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 41.59 E-value: 6.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 55 ASTKYFLTQATASMILMLGIATNLLLTGQWTMLNMLNPTASNITT--------IALAMKLGLAPFHFWVPEV-----TQG 121
Cdd:MTH00204 164 ASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLSIQkwllvgffLSLAVKIPQIPFHIWLPQAhveapVAG 243
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2130418476 122 VSMLSGmVLLTWQKIAPLSILYQISPSTN---PNLLVTLAITSVLVGGWGGLNQTQLRKILAYSSISHMGWMT 191
Cdd:MTH00204 244 SVILAG-ILLKLGGYGFLRFSWPLFPAASeyfAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVP 315
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
110-194 |
7.35e-04 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 41.57 E-value: 7.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 110 PFHFWVPEVTQGVSMLSGMVLLTWQKIAPLSILYQISPSTNPN-----LLVTLAITSVLVGGWGGLNQTQLRKILAYSSI 184
Cdd:PRK12650 226 PFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVavwnwLLIIVGMITALMGAVFAVQKTDLKKLTAYSTV 305
|
90
....*....|
gi 2130418476 185 SHMGWMTAVL 194
Cdd:PRK12650 306 SQLGWIVATI 315
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
102-323 |
1.99e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 39.47 E-value: 1.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 102 LAMKLGLAPFHFWVPEVTQGVSMLSGMVLLTWQKIAPLSILYQISPSTNPNLLVTLAITSVLVggwgGLNQTQLRKILAY 181
Cdd:MTH00091 67 LMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFFSKNFFFLLLFGLLICFFQ----MFLLKSYKNLLIL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 182 SSISHMGWMTAVLMYN-PTLMILNLSIYIMMTMgaflllilssstttlsLSHTWNKLPLNTLLVLTLMLSIGGLPPLSGF 260
Cdd:MTH00091 143 SSTESFNWLILSFFFSfFNVFFLFFYYFLLMLF----------------LIPKFNNVNKLNFVSWETLLVFMNLPFSVTF 206
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2130418476 261 MPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRLTYTTTLTMFPSSNNMKMKWQFENSKMM 323
Cdd:MTH00091 207 FVKIFSLSEILKVLGFFLLFLLFLMFLSVLSLSFWLVNLSTKLFLMLFKYNKGFFFFFLPLML 269
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
52-333 |
2.36e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 39.68 E-value: 2.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 52 AMEASTKYFLTQATASMILMLGIATNLLLTGQW---TMLNMLNPTAS-NITTIALAMKLGLAP------FHFWVPEVTQG 121
Cdd:MTH00020 160 ANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLdfsSVFNMVVSAPSsDITLICLFLFIGAVGksaqlgLHTWLPDAMEG 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 122 VSMLSGMVLLTWQKIAPLSILYQISPSTNPNLLVTLAIT-----SVLVGGWGGLNQTQLRKILAYSSISHMGWMTAVLmy 196
Cdd:MTH00020 240 PTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTivgslTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVAC-- 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 197 npTLMILNLSIYIMMTMGAFLLLILSSSTTTLSLSHT----------WNKLPLNTLLVLTLMLSIGGLPPLSGFMPKWMI 266
Cdd:MTH00020 318 --GLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDeqdmrkmgglISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLI 395
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2130418476 267 IQ-ELTKNDLIILPTLMAMTALLNLYFYMRLTYtttLTMFPSSNNMKMKWQFENSKMMPLLPPLIILS 333
Cdd:MTH00020 396 LElAFGQYYLIFAYWLGCFSALLTAFYSIRLIY---LTFLSNTNLKKAVFFHLHEGDWNLLLPLGILA 460
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
152-346 |
2.91e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 39.33 E-value: 2.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 152 NLLVTLAITSVLVGGWGGLNQTQLRKILAYSSISHMGWMTAVLMYN-------PTLMILNLSIY---IMMTMGAFLLLIL 221
Cdd:PRK12662 280 NVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNtyyglaaAVAYIVNHSIVksaLFMVSGSISYHFG 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 222 SSSTTTLSLShtWNKLPLNTLLVLTLMLSIGGLPPLSGFMPKWMIIQELTKNDLIILPTLMAMTALLNLYFYMRLTYTTT 301
Cdd:PRK12662 360 TTKLEDCLNL--WKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKIVEALY 437
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 2130418476 302 LTMfPSSNNMKMKWQFENSKMMPLLPPLIILSTMLLPLSPMLTTL 346
Cdd:PRK12662 438 FES-RMVESKANDKAFKTPNAMVLCIWIMAILSIIVGIYPIPLTL 481
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
49-347 |
3.13e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 39.36 E-value: 3.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 49 NPRAMEASTKYFLTQATASMILMLGIATNLLlTGQWTMLNM----LNPTASNITTIALAMKLGLAPFHFWVPEVTQGVSM 124
Cdd:MTH00207 133 NPKSLGAGMITALTNRIGDVMLLLSIGWTLN-QGHWSITNMwqtdMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTP 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 125 LSGMVLLTWQKIAPLSILYQISPSTNP-----NLLVTLAITSVLVGGWGGLNQTQLRKILAYSSISHMGWMTAVL-MYNP 198
Cdd:MTH00207 212 VSALVHSSTLVTAGVFLLIRFYPFLSStywfnPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLgLGMP 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 199 TLMILNLSIYIMMTMGAFLLLILSSSTTT-----LSLSHTWNKLPLNTLLVLTLMLSIGGLPPLSGFMPKWMIIQELTKN 273
Cdd:MTH00207 292 KLALFHLITHALFKALLFVCAGSLIHSHHhsqdlRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFY 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 274 DLIILPTLMAMTALLNLYFY-MRLTYTTTLT-------MFPSSNNMKMKWQFENSKMMPLLPPLIILSTMLLPLSPMLTT 345
Cdd:MTH00207 372 PHNSLMILMIFLATALTAAYsTRFTLAVLWSpnssspyHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILP 451
|
..
gi 2130418476 346 LH 347
Cdd:MTH00207 452 LQ 453
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
100-190 |
4.53e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 38.92 E-value: 4.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 100 IALAMKLGLAPFHFWVP----EVTQGVSMLSGMVLLTWQKIAPLSILYQISPSTNPNLLVTLAI---TSVLVGGWGGLNQ 172
Cdd:PRK07363 213 LGFGIKIPLVPLHTWLPdaytEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIigtISVIYGALSAIAQ 292
|
90
....*....|....*...
gi 2130418476 173 TQLRKILAYSSISHMGWM 190
Cdd:PRK07363 293 KDIKRMVAYSSIGHMGYI 310
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
87-271 |
7.32e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 38.01 E-value: 7.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 87 LNMLNPTASNITTIALAMKLGLAPFHFWVP----EVTQGVS-MLSGMVLLTwqKIAPLSILYQISPSTNPnLLVTLAITS 161
Cdd:PRK07234 179 LATADPEAFALIALGLLVKGGIFVSGLWLPlthsEAEPPVSaLLSGVVVKA--GVFPLVRCALDVPGLDL-IVRIFGVGT 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130418476 162 VLVGGWGGLNQTQLRKILAYSSISHMGWMTAVLMYNPTLMIlnlsiyimmTMGAFLLLILSSSTTTLSLSHTWNK---LP 238
Cdd:PRK07234 256 ALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVGGLYAL---------AHGLVKSTLFLCAGALPSRNFTELIsqmLG 326
|
170 180 190
....*....|....*....|....*....|....
gi 2130418476 239 LNTLLVLTLM-LSIGGLPPLSGFMPKWMIIQELT 271
Cdd:PRK07234 327 IGKWIPLTMAsFSIAGFPLLAGFVSKVLTLKNLL 360
|
|
| |
