phosphate ABC transporter permease PstC [Klebsiella pneumoniae]
phosphate ABC transporter permease subunit PstC( domain architecture ID 10793554)
phosphate ABC transporter permease subunit PstC is the transmembrane subunit (TM) found in periplasmic binding protein (PBP)-dependent ATP-binding cassette (ABC) transporter for phosphate; ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment; the captured solute is delivered to a gated translocation pathway formed by the two TMs
List of domain hits
Name | Accession | Description | Interval | E-value | |||||
pstC | PRK11275 | phosphate ABC transporter permease PstC; |
1-319 | 0e+00 | |||||
phosphate ABC transporter permease PstC; : Pssm-ID: 183070 Cd Length: 319 Bit Score: 578.96 E-value: 0e+00
|
|||||||||
Name | Accession | Description | Interval | E-value | |||||
pstC | PRK11275 | phosphate ABC transporter permease PstC; |
1-319 | 0e+00 | |||||
phosphate ABC transporter permease PstC; Pssm-ID: 183070 Cd Length: 319 Bit Score: 578.96 E-value: 0e+00
|
|||||||||
PstC | COG0573 | ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
13-317 | 4.57e-114 | |||||
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]; Pssm-ID: 440338 [Multi-domain] Cd Length: 303 Bit Score: 332.05 E-value: 4.57e-114
|
|||||||||
phosphate_pstC | TIGR02138 | phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ... |
16-311 | 4.35e-90 | |||||
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions] Pssm-ID: 273992 [Multi-domain] Cd Length: 295 Bit Score: 270.68 E-value: 4.35e-90
|
|||||||||
TM_PBP2 | cd06261 | Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
75-272 | 1.28e-11 | |||||
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others. Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 62.68 E-value: 1.28e-11
|
|||||||||
BPD_transp_1 | pfam00528 | Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
150-252 | 1.74e-04 | |||||
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices. Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 41.52 E-value: 1.74e-04
|
|||||||||
Name | Accession | Description | Interval | E-value | |||||
pstC | PRK11275 | phosphate ABC transporter permease PstC; |
1-319 | 0e+00 | |||||
phosphate ABC transporter permease PstC; Pssm-ID: 183070 Cd Length: 319 Bit Score: 578.96 E-value: 0e+00
|
|||||||||
PstC | COG0573 | ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
13-317 | 4.57e-114 | |||||
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]; Pssm-ID: 440338 [Multi-domain] Cd Length: 303 Bit Score: 332.05 E-value: 4.57e-114
|
|||||||||
phosphate_pstC | TIGR02138 | phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ... |
16-311 | 4.35e-90 | |||||
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions] Pssm-ID: 273992 [Multi-domain] Cd Length: 295 Bit Score: 270.68 E-value: 4.35e-90
|
|||||||||
PstA | COG0581 | ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
29-255 | 4.33e-34 | |||||
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]; Pssm-ID: 440346 [Multi-domain] Cd Length: 259 Bit Score: 125.15 E-value: 4.33e-34
|
|||||||||
3a0107s02c | TIGR00974 | phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ... |
16-253 | 1.16e-26 | |||||
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions] Pssm-ID: 273373 Cd Length: 271 Bit Score: 105.78 E-value: 1.16e-26
|
|||||||||
CysU | COG0555 | ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ... |
18-253 | 1.33e-13 | |||||
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; Pssm-ID: 440321 [Multi-domain] Cd Length: 268 Bit Score: 69.39 E-value: 1.33e-13
|
|||||||||
TM_PBP2 | cd06261 | Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
75-272 | 1.28e-11 | |||||
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others. Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 62.68 E-value: 1.28e-11
|
|||||||||
PotC | COG1177 | ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
16-315 | 1.75e-08 | |||||
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]; Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 54.35 E-value: 1.75e-08
|
|||||||||
pstA | PRK11268 | phosphate ABC transporter permease PstA; |
57-247 | 4.56e-08 | |||||
phosphate ABC transporter permease PstA; Pssm-ID: 183065 [Multi-domain] Cd Length: 295 Bit Score: 53.53 E-value: 4.56e-08
|
|||||||||
COG4590 | COG4590 | ABC-type uncharacterized transport system, permease component [General function prediction ... |
208-301 | 1.08e-07 | |||||
ABC-type uncharacterized transport system, permease component [General function prediction only]; Pssm-ID: 443647 [Multi-domain] Cd Length: 757 Bit Score: 53.31 E-value: 1.08e-07
|
|||||||||
FbpB | COG1178 | ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
25-241 | 1.44e-07 | |||||
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 52.47 E-value: 1.44e-07
|
|||||||||
cysT | CHL00187 | sulfate transport protein; Provisional |
78-251 | 1.55e-06 | |||||
sulfate transport protein; Provisional Pssm-ID: 214388 [Multi-domain] Cd Length: 237 Bit Score: 48.47 E-value: 1.55e-06
|
|||||||||
Mo_ABC_porter | TIGR01581 | NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively ... |
78-253 | 3.38e-06 | |||||
NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively weak homology compared to its neighbor clades, the molybdate (TIGR02141) and sulfate (TIGR00969) porters. Neighbor-Joining, PAM-distance phylogenetic trees support the separation of the clades in this way. Included in this group is a gene designated NifC in Clostridium pasturianum. It would be reasonable to presume that NifC acts as a molybdate porter since the most common form of nitrogenase is a molybdoenzyme. Several other sequences falling within the scope of this model are annotated as molybdate porters and one, from Halobacterium, is annotated as a sulfate porter. There is presently no experimental evidence to support annotations with this degree of specificity. Pssm-ID: 130643 Cd Length: 225 Bit Score: 47.39 E-value: 3.38e-06
|
|||||||||
PRK10971 | PRK10971 | sulfate/thiosulfate ABC transporter permease CysT; |
152-251 | 5.82e-06 | |||||
sulfate/thiosulfate ABC transporter permease CysT; Pssm-ID: 182873 Cd Length: 277 Bit Score: 47.06 E-value: 5.82e-06
|
|||||||||
FbpB | COG1178 | ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
25-311 | 1.25e-04 | |||||
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 43.61 E-value: 1.25e-04
|
|||||||||
BPD_transp_1 | pfam00528 | Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
150-252 | 1.74e-04 | |||||
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices. Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 41.52 E-value: 1.74e-04
|
|||||||||
modB | PRK09421 | molybdate ABC transporter permease subunit; |
178-318 | 2.80e-04 | |||||
molybdate ABC transporter permease subunit; Pssm-ID: 181841 Cd Length: 229 Bit Score: 41.45 E-value: 2.80e-04
|
|||||||||
TauC | COG0600 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ... |
112-239 | 1.50e-03 | |||||
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]; Pssm-ID: 440365 [Multi-domain] Cd Length: 254 Bit Score: 39.36 E-value: 1.50e-03
|
|||||||||
PotB | COG1176 | ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ... |
26-233 | 4.57e-03 | |||||
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]; Pssm-ID: 440789 [Multi-domain] Cd Length: 287 Bit Score: 38.20 E-value: 4.57e-03
|
|||||||||
Blast search parameters | ||||
|