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Conserved domains on  [gi|1614463747|gb|TGQ71106|]
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sarcosine oxidase subunit beta [bacterium M00.F.Ca.ET.205.01.1.1]

Protein Classification

sarcosine oxidase subunit beta( domain architecture ID 11492372)

sarcosine oxidase subunit beta is a part of a heterotetrameric sarcosine oxidase, which catalyzes the oxidative demethylation of sarcosine to yield glycine, hydrogen peroxide and 5,10-methylenetetrahydrofolate

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
soxB TIGR01373
sarcosine oxidase, beta subunit family, heterotetrameric form; This model describes the beta ...
 3-409 0e+00

sarcosine oxidase, beta subunit family, heterotetrameric form; This model describes the beta subunit of a family of known and putative heterotetrameric sarcosine oxidases. Five operons of such oxidases are found in Mesorhizobium loti and three in Agrobacterium tumefaciens, a high enough copy number to suggest that not all members are share the same function. The model is designated as subfamily rather than equivalog for this reason. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms. [Energy metabolism, Amino acids and amines]


:

Pssm-ID: 273585 [Multi-domain]  Cd Length: 407  Bit Score: 802.49  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747   3 KYSVFAIAREAMRGHKGWEEQWSSPEPKKEYDVIIVGAGGHGLATAYYLATEHGITNVAVLEKGWLGGGNTGRNTTIIRS 82
Cdd:TIGR01373   1 RYSAFSLLKEGLRGHRGWKPAWRSPEPKPTYDVIIVGGGGHGLATAYYLAKEHGITNVAVLEKGWLGGGNTGRNTTIVRS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747  83 NYLYDESAGIYDHALKLWDGLSQELNYNVMYSARGVMMLAHNVHDIQVLKRHVHANRLNGIDNEWLSPEQAKEFCPPLNI 162
Cdd:TIGR01373  81 NYLYPESAELYEHAMKLWEGLSQDLNYNVMFSQRGVLNLCHSTADMDDGARRVNAMRLNGVDAELLSPEQVRRVIPILDF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 163 SKEARYPVVGAALQRRGGTARHDAVAWGYARGASARGVHIIQNCEVTGVKRAANGAVMGVETSRGFIGAKKVGVVAAGHS 242
Cdd:TIGR01373 161 SPDARFPVVGGLLQRRGGTARHDAVAWGYARGADRRGVDIIQNCEVTGFIRRDGGRVIGVETTRGFIGAKKVGVAVAGHS 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 243 SVIMNMAGVRMPLESYPLQALVSEPVKPVVPCVIMSNTVHAYISQSDKGELVIGAGTDQYVSYSQTGGLHILQHTLDAIC 322
Cdd:TIGR01373 241 SVVAAMAGFRLPIESHPLQALVSEPLKPIIDTVVMSNAVHFYVSQSDKGELVIGGGIDGYNSYAQRGNLPTLEHVLAAIL 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 323 EMFPIFTRMKMLRSWGGIVDVTPDRSPILAKTPVPGLYVNCGWGTGGFKATPGSGNVFAHTIARDDPHPINAPFTIERFR 402
Cdd:TIGR01373 321 EMFPILSRVRMLRSWGGIVDVTPDGSPIIGKTPLPNLYLNCGWGTGGFKATPASGTVFAHTLARGEPHDINAPFTLDRFH 400


                  ....*..
gi 1614463747 403 TGRLIDE 409
Cdd:TIGR01373 401 SGRLIDE 407
 
Name Accession Description Interval E-value
soxB TIGR01373
sarcosine oxidase, beta subunit family, heterotetrameric form; This model describes the beta ...
 3-409 0e+00

sarcosine oxidase, beta subunit family, heterotetrameric form; This model describes the beta subunit of a family of known and putative heterotetrameric sarcosine oxidases. Five operons of such oxidases are found in Mesorhizobium loti and three in Agrobacterium tumefaciens, a high enough copy number to suggest that not all members are share the same function. The model is designated as subfamily rather than equivalog for this reason. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms. [Energy metabolism, Amino acids and amines]


Pssm-ID: 273585 [Multi-domain]  Cd Length: 407  Bit Score: 802.49  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747   3 KYSVFAIAREAMRGHKGWEEQWSSPEPKKEYDVIIVGAGGHGLATAYYLATEHGITNVAVLEKGWLGGGNTGRNTTIIRS 82
Cdd:TIGR01373   1 RYSAFSLLKEGLRGHRGWKPAWRSPEPKPTYDVIIVGGGGHGLATAYYLAKEHGITNVAVLEKGWLGGGNTGRNTTIVRS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747  83 NYLYDESAGIYDHALKLWDGLSQELNYNVMYSARGVMMLAHNVHDIQVLKRHVHANRLNGIDNEWLSPEQAKEFCPPLNI 162
Cdd:TIGR01373  81 NYLYPESAELYEHAMKLWEGLSQDLNYNVMFSQRGVLNLCHSTADMDDGARRVNAMRLNGVDAELLSPEQVRRVIPILDF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 163 SKEARYPVVGAALQRRGGTARHDAVAWGYARGASARGVHIIQNCEVTGVKRAANGAVMGVETSRGFIGAKKVGVVAAGHS 242
Cdd:TIGR01373 161 SPDARFPVVGGLLQRRGGTARHDAVAWGYARGADRRGVDIIQNCEVTGFIRRDGGRVIGVETTRGFIGAKKVGVAVAGHS 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 243 SVIMNMAGVRMPLESYPLQALVSEPVKPVVPCVIMSNTVHAYISQSDKGELVIGAGTDQYVSYSQTGGLHILQHTLDAIC 322
Cdd:TIGR01373 241 SVVAAMAGFRLPIESHPLQALVSEPLKPIIDTVVMSNAVHFYVSQSDKGELVIGGGIDGYNSYAQRGNLPTLEHVLAAIL 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 323 EMFPIFTRMKMLRSWGGIVDVTPDRSPILAKTPVPGLYVNCGWGTGGFKATPGSGNVFAHTIARDDPHPINAPFTIERFR 402
Cdd:TIGR01373 321 EMFPILSRVRMLRSWGGIVDVTPDGSPIIGKTPLPNLYLNCGWGTGGFKATPASGTVFAHTLARGEPHDINAPFTLDRFH 400


                  ....*..
gi 1614463747 403 TGRLIDE 409
Cdd:TIGR01373 401 SGRLIDE 407
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
31-400 2.88e-86

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 267.16  E-value: 2.88e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747  31 KEYDVIIVGAGGHGLATAYYLAtEHGItNVAVLEKGWLGGGNTGRNTTIIRSNYLYDESAGIYD---HALKLWDGLSQEL 107
Cdd:COG0665     1 ATADVVVIGGGIAGLSTAYHLA-RRGL-DVTVLERGRPGSGASGRNAGQLRPGLAALADRALVRlarEALDLWRELAAEL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 108 NYNVMYSARGVMMLAHNVHDIQVLKRHVHANRLNGIDNEWLSPEQAKEFCPPLNISkearyPVVGAALQRRGGTARHDAV 187
Cdd:COG0665    79 GIDCDFRRTGVLYLARTEAELAALRAEAEALRALGLPVELLDAAELREREPGLGSP-----DYAGGLYDPDDGHVDPAKL 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 188 AWGYARGASARGVHIIQNCEVTGVKRAANGAVmGVETSRGFIGAKKVgVVAAG-HSSVIMNMAGVRMPLESYPLQALVSE 266
Cdd:COG0665   154 VRALARAARAAGVRIREGTPVTGLEREGGRVT-GVRTERGTVRADAV-VLAAGaWSARLLPMLGLRLPLRPVRGYVLVTE 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 267 PVKPVVPCVIMSNTvHAYISQSDKGELVIGaGTDQYVSYSQTGGLHILQHTLDAICEMFPIFTRMKMLRSWGGIVDVTPD 346
Cdd:COG0665   232 PLPDLPLRPVLDDT-GVYLRPTADGRLLVG-GTAEPAGFDRAPTPERLEALLRRLRRLFPALADAEIVRAWAGLRPMTPD 309

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1614463747 347 RSPILAKTP-VPGLYVNCGWGTGGFKATPGSGNVFAHTIARDDPHPINAPFTIER 400
Cdd:COG0665   310 GLPIIGRLPgAPGLYVATGHGGHGVTLAPAAGRLLADLILGGEPPLDLAPFSPDR 364
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 34-382 2.16e-67

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 217.65  E-value: 2.16e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747  34 DVIIVGAGGHGLATAYYLAtEHGItNVAVLEKG-WLGGGNTGRNTTIIRSNYLYDESAGIYD---HALKLWDGLSQELNY 109
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYELA-RRGL-SVTLLERGdDPGSGASGRNAGLIHPGLRYLEPSELARlalEALDLWEELEEELGI 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 110 NVMYSARGVMMLAHNvHDIQVLKRHVHANRLNGIDNEWLSPEQAKEFCPPLNiskearyPVVGAALQRRGGTARHDAVAW 189
Cdd:pfam01266  79 DCGFRRCGVLVLARD-EEEEALEKLLAALRRLGVPAELLDAEELRELEPLLP-------GLRGGLFYPDGGHVDPARLLR 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 190 GYARGASARGVHIIQNCEVTGVKRAanGAVMGVETSrgfiGAKKVGVVAAGHSSVIMNMAGVRMPLESYPLQALVSEPVK 269
Cdd:pfam01266 151 ALARAAEALGVRIIEGTEVTGIEEE--GGVWGVVTT----GEADAVVNAAGAWADLLALPGLRLPVRPVRGQVLVLEPLP 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 270 PVVP----CVIMSNTVHAYISQSDKGELVIGAGTDQYVSYSQTGGLHILQHTLDAICEMFPIFTRmkMLRSWGGIVDvTP 345
Cdd:pfam01266 225 EALLilpvPITVDPGRGVYLRPRADGRLLLGGTDEEDGFDDPTPDPEEIEELLEAARRLFPALAD--IERAWAGLRP-LP 301

                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 1614463747 346 DRSPILAKTPVPGLYVNCGWGTGGFKATPGSGNVFAH 382
Cdd:pfam01266 302 DGLPIIGRPGSPGLYLATGHGGHGLTLAPGIGKLLAE 338
solA PRK11259
N-methyl-L-tryptophan oxidase;
33-240 3.08e-14

N-methyl-L-tryptophan oxidase;


Pssm-ID: 236887 [Multi-domain]  Cd Length: 376  Bit Score: 73.72  E-value: 3.08e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747  33 YDVIIVGAGGHGLATAYYLAtEHGItNVAVLE-------KGWLGGGntgrnTTIIRSNYLYDESagiY----DHALKLWD 101
Cdd:PRK11259    4 YDVIVIGLGSMGSAAGYYLA-RRGL-RVLGLDrfmpphqQGSSHGD-----TRIIRHAYGEGPA---YvplvLRAQELWR 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 102 GLSQELNYNVMySARGVMMLAHnvHDIQVLKRHVHANRLNGIDNEWLSPEQAKEFCPPLNISKEARypvvgAALQRRGGT 181
Cdd:PRK11259   74 ELERESGEPLF-VRTGVLNLGP--ADSDFLANSIRSARQHGLPHEVLDAAEIRRRFPQFRLPDGYI-----ALFEPDGGF 145

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1614463747 182 ARHDAVAWGYARGASARGVHIIQNCEVTGVKRAANGAVmgVETSRGFIGAKKVgVVAAG 240
Cdd:PRK11259  146 LRPELAIKAHLRLAREAGAELLFNEPVTAIEADGDGVT--VTTADGTYEAKKL-VVSAG 201
 
Name Accession Description Interval E-value
soxB TIGR01373
sarcosine oxidase, beta subunit family, heterotetrameric form; This model describes the beta ...
 3-409 0e+00

sarcosine oxidase, beta subunit family, heterotetrameric form; This model describes the beta subunit of a family of known and putative heterotetrameric sarcosine oxidases. Five operons of such oxidases are found in Mesorhizobium loti and three in Agrobacterium tumefaciens, a high enough copy number to suggest that not all members are share the same function. The model is designated as subfamily rather than equivalog for this reason. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms. [Energy metabolism, Amino acids and amines]


Pssm-ID: 273585 [Multi-domain]  Cd Length: 407  Bit Score: 802.49  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747   3 KYSVFAIAREAMRGHKGWEEQWSSPEPKKEYDVIIVGAGGHGLATAYYLATEHGITNVAVLEKGWLGGGNTGRNTTIIRS 82
Cdd:TIGR01373   1 RYSAFSLLKEGLRGHRGWKPAWRSPEPKPTYDVIIVGGGGHGLATAYYLAKEHGITNVAVLEKGWLGGGNTGRNTTIVRS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747  83 NYLYDESAGIYDHALKLWDGLSQELNYNVMYSARGVMMLAHNVHDIQVLKRHVHANRLNGIDNEWLSPEQAKEFCPPLNI 162
Cdd:TIGR01373  81 NYLYPESAELYEHAMKLWEGLSQDLNYNVMFSQRGVLNLCHSTADMDDGARRVNAMRLNGVDAELLSPEQVRRVIPILDF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 163 SKEARYPVVGAALQRRGGTARHDAVAWGYARGASARGVHIIQNCEVTGVKRAANGAVMGVETSRGFIGAKKVGVVAAGHS 242
Cdd:TIGR01373 161 SPDARFPVVGGLLQRRGGTARHDAVAWGYARGADRRGVDIIQNCEVTGFIRRDGGRVIGVETTRGFIGAKKVGVAVAGHS 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 243 SVIMNMAGVRMPLESYPLQALVSEPVKPVVPCVIMSNTVHAYISQSDKGELVIGAGTDQYVSYSQTGGLHILQHTLDAIC 322
Cdd:TIGR01373 241 SVVAAMAGFRLPIESHPLQALVSEPLKPIIDTVVMSNAVHFYVSQSDKGELVIGGGIDGYNSYAQRGNLPTLEHVLAAIL 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 323 EMFPIFTRMKMLRSWGGIVDVTPDRSPILAKTPVPGLYVNCGWGTGGFKATPGSGNVFAHTIARDDPHPINAPFTIERFR 402
Cdd:TIGR01373 321 EMFPILSRVRMLRSWGGIVDVTPDGSPIIGKTPLPNLYLNCGWGTGGFKATPASGTVFAHTLARGEPHDINAPFTLDRFH 400


                  ....*..
gi 1614463747 403 TGRLIDE 409
Cdd:TIGR01373 401 SGRLIDE 407
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
31-400 2.88e-86

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 267.16  E-value: 2.88e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747  31 KEYDVIIVGAGGHGLATAYYLAtEHGItNVAVLEKGWLGGGNTGRNTTIIRSNYLYDESAGIYD---HALKLWDGLSQEL 107
Cdd:COG0665     1 ATADVVVIGGGIAGLSTAYHLA-RRGL-DVTVLERGRPGSGASGRNAGQLRPGLAALADRALVRlarEALDLWRELAAEL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 108 NYNVMYSARGVMMLAHNVHDIQVLKRHVHANRLNGIDNEWLSPEQAKEFCPPLNISkearyPVVGAALQRRGGTARHDAV 187
Cdd:COG0665    79 GIDCDFRRTGVLYLARTEAELAALRAEAEALRALGLPVELLDAAELREREPGLGSP-----DYAGGLYDPDDGHVDPAKL 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 188 AWGYARGASARGVHIIQNCEVTGVKRAANGAVmGVETSRGFIGAKKVgVVAAG-HSSVIMNMAGVRMPLESYPLQALVSE 266
Cdd:COG0665   154 VRALARAARAAGVRIREGTPVTGLEREGGRVT-GVRTERGTVRADAV-VLAAGaWSARLLPMLGLRLPLRPVRGYVLVTE 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 267 PVKPVVPCVIMSNTvHAYISQSDKGELVIGaGTDQYVSYSQTGGLHILQHTLDAICEMFPIFTRMKMLRSWGGIVDVTPD 346
Cdd:COG0665   232 PLPDLPLRPVLDDT-GVYLRPTADGRLLVG-GTAEPAGFDRAPTPERLEALLRRLRRLFPALADAEIVRAWAGLRPMTPD 309

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1614463747 347 RSPILAKTP-VPGLYVNCGWGTGGFKATPGSGNVFAHTIARDDPHPINAPFTIER 400
Cdd:COG0665   310 GLPIIGRLPgAPGLYVATGHGGHGVTLAPAAGRLLADLILGGEPPLDLAPFSPDR 364
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 34-382 2.16e-67

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 217.65  E-value: 2.16e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747  34 DVIIVGAGGHGLATAYYLAtEHGItNVAVLEKG-WLGGGNTGRNTTIIRSNYLYDESAGIYD---HALKLWDGLSQELNY 109
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYELA-RRGL-SVTLLERGdDPGSGASGRNAGLIHPGLRYLEPSELARlalEALDLWEELEEELGI 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 110 NVMYSARGVMMLAHNvHDIQVLKRHVHANRLNGIDNEWLSPEQAKEFCPPLNiskearyPVVGAALQRRGGTARHDAVAW 189
Cdd:pfam01266  79 DCGFRRCGVLVLARD-EEEEALEKLLAALRRLGVPAELLDAEELRELEPLLP-------GLRGGLFYPDGGHVDPARLLR 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 190 GYARGASARGVHIIQNCEVTGVKRAanGAVMGVETSrgfiGAKKVGVVAAGHSSVIMNMAGVRMPLESYPLQALVSEPVK 269
Cdd:pfam01266 151 ALARAAEALGVRIIEGTEVTGIEEE--GGVWGVVTT----GEADAVVNAAGAWADLLALPGLRLPVRPVRGQVLVLEPLP 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 270 PVVP----CVIMSNTVHAYISQSDKGELVIGAGTDQYVSYSQTGGLHILQHTLDAICEMFPIFTRmkMLRSWGGIVDvTP 345
Cdd:pfam01266 225 EALLilpvPITVDPGRGVYLRPRADGRLLLGGTDEEDGFDDPTPDPEEIEELLEAARRLFPALAD--IERAWAGLRP-LP 301

                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 1614463747 346 DRSPILAKTPVPGLYVNCGWGTGGFKATPGSGNVFAH 382
Cdd:pfam01266 302 DGLPIIGRPGSPGLYLATGHGGHGLTLAPGIGKLLAE 338
LhgO COG0579
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
31-259 2.85e-23

L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];


Pssm-ID: 440344 [Multi-domain]  Cd Length: 418  Bit Score: 100.99  E-value: 2.85e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747  31 KEYDVIIVGAGGHGLATAYYLATEHGItNVAVLEKGW-LGGGNTGRNTTIIRsnylydesAGIYD--------HALK--- 98
Cdd:COG0579     3 EMYDVVIIGAGIVGLALARELSRYEDL-KVLVLEKEDdVAQESSGNNSGVIH--------AGLYYtpgslkarLCVEgne 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747  99 LWDGLSQELnyNVMYSARGVMMLAHNVHDIQVLKRHVHANRLNGIDN-EWLSPEQAKEFCPplNISKEARypvvgAALQR 177
Cdd:COG0579    74 LFYELCREL--GIPFKRCGKLVVATGEEEVAFLEKLYERGKANGVPGlEILDREELRELEP--LLSDEGV-----AALYS 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 178 RGGTarhD----AVAWGYARGASARGVHIIQNCEVTGVKRAANGAVmgVETSRGFIGAKKVgVVAAG-HSSVIMNMAGVR 252
Cdd:COG0579   145 PSTG---IvdpgALTRALAENAEANGVELLLNTEVTGIEREGDGWE--VTTNGGTIRARFV-INAAGlYADRLAQMAGIG 218


                  ....*..
gi 1614463747 253 MPLESYP 259
Cdd:COG0579   219 KDFGIFP 225
thiamin_ThiO TIGR02352
glycine oxidase ThiO; This family consists of the homotetrameric, FAD-dependent glycine ...
 95-384 2.12e-19

glycine oxidase ThiO; This family consists of the homotetrameric, FAD-dependent glycine oxidase ThiO, from species such as Bacillus subtilis that use glycine in thiamine biosynthesis. In general, members of this family will not be found in species such as E. coli that instead use tyrosine and the ThiH protein. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine]


Pssm-ID: 274092 [Multi-domain]  Cd Length: 337  Bit Score: 88.58  E-value: 2.12e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747  95 HALKLWDGLSQEL----NYNVMYSARGVMMLAHNVHDIQVLKRHVHANRLNGIDNEWLSPEQAKEFCPPLN--ISKEARY 168
Cdd:TIGR02352  49 ESLRLYPEWLEALkeltGLDTGYHQCGTLVVAFDEDDVEHLRQLADLQSATGMEVEWLSGRALRRLEPYLSggIRGAVFY 128

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 169 PVVGAALQRRGGTArhdavawgYARGASARGVHIIQNCEVTGVkRAANGAVMGVETSRGFIGAKKVgVVAAG------HS 242
Cdd:TIGR02352 129 PDDAHVDPRALLKA--------LEKALEKLGVEIIEHTEVQHI-EIRGEKVTAIVTPSGDVQADQV-VLAAGawagelLP 198

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 243 SVIMNMAG--VRMPLESYPLQalvSEPVKPVVPcvimsnTVHAYISQSDKGELVIGAGTDQ--YVSYSQTGGLHILqhtL 318
Cdd:TIGR02352 199 LPLRPVRGqpLRLEAPAVPLL---NRPLRAVVY------GRRVYIVPRRDGRLVVGATMEEsgFDTTPTLGGIKEL---L 266

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1614463747 319 DAICEMFPIFTRMKMLRSWGGIVDVTPDRSPILAKTP-VPGLYVNCGWGTGGFKATPGSGNVFAHTI 384
Cdd:TIGR02352 267 RDAYTILPALKEARLLETWAGLRPGTPDNLPYIGEHPeDRRLLIATGHYRNGILLAPATAEVIADLI 333
solA PRK11259
N-methyl-L-tryptophan oxidase;
33-240 3.08e-14

N-methyl-L-tryptophan oxidase;


Pssm-ID: 236887 [Multi-domain]  Cd Length: 376  Bit Score: 73.72  E-value: 3.08e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747  33 YDVIIVGAGGHGLATAYYLAtEHGItNVAVLE-------KGWLGGGntgrnTTIIRSNYLYDESagiY----DHALKLWD 101
Cdd:PRK11259    4 YDVIVIGLGSMGSAAGYYLA-RRGL-RVLGLDrfmpphqQGSSHGD-----TRIIRHAYGEGPA---YvplvLRAQELWR 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 102 GLSQELNYNVMySARGVMMLAHnvHDIQVLKRHVHANRLNGIDNEWLSPEQAKEFCPPLNISKEARypvvgAALQRRGGT 181
Cdd:PRK11259   74 ELERESGEPLF-VRTGVLNLGP--ADSDFLANSIRSARQHGLPHEVLDAAEIRRRFPQFRLPDGYI-----ALFEPDGGF 145

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1614463747 182 ARHDAVAWGYARGASARGVHIIQNCEVTGVKRAANGAVmgVETSRGFIGAKKVgVVAAG 240
Cdd:PRK11259  146 LRPELAIKAHLRLAREAGAELLFNEPVTAIEADGDGVT--VTTADGTYEAKKL-VVSAG 201
PRK11728 PRK11728
L-2-hydroxyglutarate oxidase;
33-251 1.45e-13

L-2-hydroxyglutarate oxidase;


Pssm-ID: 183292 [Multi-domain]  Cd Length: 393  Bit Score: 71.78  E-value: 1.45e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747  33 YDVIIVGAGGHGLATAYYLATEHGITNVAVLEK--GWlGGGNTGRNTTIIRsnylydesAGIY--------------DHA 96
Cdd:PRK11728    3 YDFVIIGGGIVGLSTAMQLQERYPGARIAVLEKesGP-ARHQTGHNSGVIH--------AGVYytpgslkarfcrrgNEA 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747  97 LKlwdGLSQElnYNVMYSARGVMMLAHNVHDIQVLKRHVHANRLNGIDNEWLSPEQAKEFCPplNISKearypvVGAALQ 176
Cdd:PRK11728   74 TK---AFCDQ--HGIPYEECGKLLVATSELELERMEALYERARANGIEVERLDAEELREREP--NIRG------LGAIFV 140

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1614463747 177 RRGGTARHDAVAWGYARGASARGVHIIQNCEVTGVKRAANGAVmgVETSRGFIGAKKVgVVAAG-HSSVIMNMAGV 251
Cdd:PRK11728  141 PSTGIVDYRAVAEAMAELIQARGGEIRLGAEVTALDEHANGVV--VRTTQGEYEARTL-INCAGlMSDRLAKMAGL 213
PRK00711 PRK00711
D-amino acid dehydrogenase;
192-401 6.33e-11

D-amino acid dehydrogenase;


Pssm-ID: 234819 [Multi-domain]  Cd Length: 416  Bit Score: 63.67  E-value: 6.33e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 192 ARGASARGVHIIQNCEVTGVkRAANGAVMGVETSRGFIGAKKVgVVAAG-HSSVIMNMAGVRMPLesYPLQA------LV 264
Cdd:PRK00711  208 AAMAEQLGVKFRFNTPVDGL-LVEGGRITGVQTGGGVITADAY-VVALGsYSTALLKPLGVDIPV--YPLKGysltvpIT 283

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 265 SEPVKPVVpcVIMSNTVHAYISQSDKGELVigAGTDQYVSYSqtggLHILQH---TLDAIC-EMFPIFTRMKMLRSWGGI 340
Cdd:PRK00711  284 DEDRAPVS--TVLDETYKIAITRFDDRIRV--GGMAEIVGFD----LRLDPArreTLEMVVrDLFPGGGDLSQATFWTGL 355

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1614463747 341 VDVTPDRSPILAKTPVPGLYVNCGWGTGGFKATPGSGNVFAHTIARDDPhPINA-PFTIERF 401
Cdd:PRK00711  356 RPMTPDGTPIVGATRYKNLWLNTGHGTLGWTMACGSGQLLADLISGRKP-AIDAdDLSVARY 416
soxA_mon TIGR01377
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ...
 33-403 1.55e-10

sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]


Pssm-ID: 130444 [Multi-domain]  Cd Length: 380  Bit Score: 62.15  E-value: 1.55e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747  33 YDVIIVGAGGHGLATAYYLAtEHGItNVAVLEKGWL--GGGNTGRNTTIIRSNYLYDESAGIYDHALKLWDGLSQELNYN 110
Cdd:TIGR01377   1 FDVIVVGAGIMGCFAAYHLA-KHGK-KTLLLEQFDLphSRGSSHGQSRIIRKAYPEDFYTPMMLECYQLWAQLEKEAGTK 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 111 VmYSARGVMMLAhnVHDIQVLKRHVHANRLNGIDNEWLSPEQAKEFCPplNISKEARYPvvgAALQRRGGTARHDAVAWG 190
Cdd:TIGR01377  79 L-HRQTGLLLLG--PKENQFLKTIQATLSRHGLEHELLSSKQLKQRFP--NIRVPRNEV---GLLDPNGGVLYAEKALRA 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 191 YARGASARGVHIIQNCEVTGVKRaaNGAVMGVETSRGFIGAKKVGVVAAGHSSVIMNMAGVRMPLEsyPLQALV------ 264
Cdd:TIGR01377 151 LQELAEAHGATVRDGTKVVEIEP--TELLVTVKTTKGSYQANKLVVTAGAWTSKLLSPLGIEIPLQ--PLRINVcywrek 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 265 ---SEPVKPVVPCvIMSNTVHAYISQSDKGElviGAGTDQyVSYSqtGGLHILQHTLDaiCEMFPIFTRMKMLRSW---- 337
Cdd:TIGR01377 227 epgSYGVSQAFPC-FLVLGLNPHIYGLPSFE---YPGLMK-VYYH--HGQQIDPDERD--CPFGADIEDVQILRKFvrdh 297

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1614463747 338 -GGIVD-----------VTPDRSPILAKTP-VPGLYVNCGWGTGGFKATPGSGNVFAHTIARDDPHPINAPFTIERFRT 403
Cdd:TIGR01377 298 lPGLNGepkkgevcmytNTPDEHFVIDLHPkYDNVVIGAGFSGHGFKLAPVVGKILAELAMKLKPSYDLAIFSLNRFAL 376
PLN02576 PLN02576
protoporphyrinogen oxidase
 26-90 8.13e-07

protoporphyrinogen oxidase


Pssm-ID: 215314 [Multi-domain]  Cd Length: 496  Bit Score: 51.17  E-value: 8.13e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1614463747  26 SPEPKKEYDVIIVGAGGHGLATAYYLATEHGiTNVAVLEKGWLGGGNTgrnTTIIRSNYLYDESA 90
Cdd:PLN02576    6 GSAAASSKDVAVVGAGVSGLAAAYALASKHG-VNVLVTEARDRVGGNI---TSVSEDGFIWEEGP 66
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
 30-240 2.21e-06

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 49.45  E-value: 2.21e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747  30 KKEYDVIIVGAGGHGLATAYYLAtEHGItNVAVLEKGWLGGGNTGRNTTIIR-SNYLYDESAG---IYDHA---LKLWDG 102
Cdd:COG1053     1 DHEYDVVVVGSGGAGLRAALEAA-EAGL-KVLVLEKVPPRGGHTAAAQGGINaAGTNVQKAAGedsPEEHFydtVKGGDG 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 103 LS-QELnynvmysargVMMLAHNVHD-IQVLKRHvhanrlnGIdnewlspeqakefcpPLNISKEARYPVVGAALQRR-- 178
Cdd:COG1053    79 LAdQDL----------VEALAEEAPEaIDWLEAQ-------GV---------------PFSRTPDGRLPQFGGHSVGRtc 126

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614463747 179 ---GGTARhdAVAWGYARGASARGVHIIQNCEVTGVKRaANGAVMGVETSRG-----FIGAKKVgVVAAG 240
Cdd:COG1053   127 yagDGTGH--ALLATLYQAALRLGVEIFTETEVLDLIV-DDGRVVGVVARDRtgeivRIRAKAV-VLATG 192
PRK06481 PRK06481
flavocytochrome c;
21-94 1.61e-05

flavocytochrome c;


Pssm-ID: 180584 [Multi-domain]  Cd Length: 506  Bit Score: 47.14  E-value: 1.61e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1614463747  21 EEQWSSP-EPKKEYDVIIVGAGGHGLaTAYYLATEHGItNVAVLEKGWLGGGNTGRNTTIIR-SNYLYDESAGIYD 94
Cdd:PRK06481   49 KTSYTDPsELKDKYDIVIVGAGGAGM-SAAIEAKDAGM-NPVILEKMPVAGGNTMKASSGMNaSETKFQKAQGIAD 122
NadB COG0029
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ...
 29-73 2.27e-05

Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 439800 [Multi-domain]  Cd Length: 521  Bit Score: 46.64  E-value: 2.27e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1614463747  29 PKKEYDVIIVGAGGHGLATAYYLAtEHGitNVAVLEKGWLGGGNT 73
Cdd:COG0029     1 ERLKTDVLVIGSGIAGLSAALKLA-ERG--RVTLLTKGELGESNT 42
Thi4 pfam01946
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.
 32-70 4.52e-05

Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.


Pssm-ID: 460393  Cd Length: 232  Bit Score: 44.39  E-value: 4.52e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1614463747  32 EYDVIIVGAGGHGLATAYYLATEHGItNVAVLEK-------GWLGG 70
Cdd:pfam01946  17 ESDVVIVGAGSSGLTAAYYLAKNRGL-KVAIIERsvspgggAWLGG 61
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 27-66 1.50e-04

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 43.70  E-value: 1.50e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1614463747  27 PEPKKEYDVIIVGAGGHGLATAYYLaTEHGItNVAVLEKG 66
Cdd:COG2072     1 TAATEHVDVVVIGAGQAGLAAAYHL-RRAGI-DFVVLEKA 38
PRK06370 PRK06370
FAD-containing oxidoreductase;
28-86 1.88e-04

FAD-containing oxidoreductase;


Pssm-ID: 235787 [Multi-domain]  Cd Length: 463  Bit Score: 43.65  E-value: 1.88e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1614463747  28 EPKKEYDVIIVGAGGHGLATAYYLAtEHGITnVAVLEKGWLGGG--NTG--RNTTIIRSNYLY 86
Cdd:PRK06370    1 TPAQRYDAIVIGAGQAGPPLAARAA-GLGMK-VALIERGLLGGTcvNTGcvPTKTLIASARAA 61
PRK12839 PRK12839
FAD-dependent oxidoreductase;
26-73 2.29e-04

FAD-dependent oxidoreductase;


Pssm-ID: 237223 [Multi-domain]  Cd Length: 572  Bit Score: 43.28  E-value: 2.29e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1614463747  26 SPEPKKEYDVIIVGAGGHGLATAyyLATEHGITNVAVLEKGWLGGGNT 73
Cdd:PRK12839    2 TPSMTHTYDVVVVGSGAGGLSAA--VAAAYGGAKVLVVEKASTCGGAT 47
PRK06292 PRK06292
dihydrolipoamide dehydrogenase; Validated
 31-70 4.22e-04

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235774 [Multi-domain]  Cd Length: 460  Bit Score: 42.47  E-value: 4.22e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1614463747  31 KEYDVIIVGAGGHGLaTAYYLATEHGItNVAVLEKGWLGG 70
Cdd:PRK06292    2 EKYDVIVIGAGPAGY-VAARRAAKLGK-KVALIEKGPLGG 39
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 34-73 1.16e-03

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 40.73  E-value: 1.16e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1614463747  34 DVIIVGAGGHGLATAYYLAtEHGItNVAVLEKGWLGGGNT 73
Cdd:pfam00890   1 DVLVIGGGLAGLAAALAAA-EAGL-KVAVVEKGQPFGGAT 38
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
 31-70 1.19e-03

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 40.84  E-value: 1.19e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1614463747  31 KEYDVIIVGAGGHGLATAYYLAtEHGItNVAVLEKGWLGG 70
Cdd:COG1249     2 KDYDLVVIGAGPGGYVAAIRAA-QLGL-KVALVEKGRLGG 39
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
33-70 1.47e-03

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 40.10  E-value: 1.47e-03
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1614463747  33 YDVIIVGAGGHGLATAYYLATEhGItNVAVLEKGWLGG 70
Cdd:COG0492     1 YDVVIIGAGPAGLTAAIYAARA-GL-KTLVIEGGEPGG 36
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 30-71 1.83e-03

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 40.22  E-value: 1.83e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1614463747  30 KKEYDVIIVGAGGHGLATAYYLATEhGItNVAVLEK-GWLGGG 71
Cdd:COG1233     1 MMMYDVVVIGAGIGGLAAAALLARA-GY-RVTVLEKnDTPGGR 41
PRK12844 PRK12844
3-ketosteroid-delta-1-dehydrogenase; Reviewed
 32-80 4.98e-03

3-ketosteroid-delta-1-dehydrogenase; Reviewed


Pssm-ID: 183787 [Multi-domain]  Cd Length: 557  Bit Score: 38.97  E-value: 4.98e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 1614463747  32 EYDVIIVGAGGHGLATAYYlATEHGITNVaVLEKGWLGGGNTGRNTTII 80
Cdd:PRK12844    6 TYDVVVVGSGGGGMCAALA-AADSGLEPL-IVEKQDKVGGSTAMSGGVL 52
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
28-64 6.53e-03

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 38.75  E-value: 6.53e-03
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 1614463747  28 EPKKEYDVIIVGAGGHGLATAYYLAtEHGITnVAVLE 64
Cdd:COG1231     3 RRARGKDVVIVGAGLAGLAAARELR-KAGLD-VTVLE 37
PRK07843 PRK07843
3-oxosteroid 1-dehydrogenase;
29-75 6.88e-03

3-oxosteroid 1-dehydrogenase;


Pssm-ID: 236111 [Multi-domain]  Cd Length: 557  Bit Score: 38.48  E-value: 6.88e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1614463747  29 PKKEYDVIIVGAGGHGLaTAYYLATEHGITNVaVLEKGWLGGGNTGR 75
Cdd:PRK07843    4 TVQEYDVVVVGSGAAGM-VAALTAAHRGLSTV-VVEKAPHYGGSTAR 48
Pyr_redox_3 pfam13738
Pyridine nucleotide-disulphide oxidoreductase;
191-240 8.47e-03

Pyridine nucleotide-disulphide oxidoreductase;


Pssm-ID: 404603 [Multi-domain]  Cd Length: 296  Bit Score: 37.97  E-value: 8.47e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1614463747 191 YARGASARGVHIIQNCEVTGVKRAANGAVmgVETSRGFIGAKKVgVVAAG 240
Cdd:pfam13738  81 LRRVADHFELPINLFEEVTSVKKEDDGFV--VTTSKGTYQARYV-IIATG 127
PRK02106 PRK02106
choline dehydrogenase; Validated
 31-66 8.89e-03

choline dehydrogenase; Validated


Pssm-ID: 235000 [Multi-domain]  Cd Length: 560  Bit Score: 38.27  E-value: 8.89e-03
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 1614463747  31 KEYDVIIVGAGGHGLATAYYLaTEHGITNVAVLEKG 66
Cdd:PRK02106    4 MEYDYIIIGAGSAGCVLANRL-SEDPDVSVLLLEAG 38
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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