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Conserved domains on  [gi|1599837605|gb|TER20837|]
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pyridoxal-phosphate dependent enzyme [Pseudomonas aeruginosa]

Protein Classification

1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase( domain architecture ID 10006466)

1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase is a pyridoxal-phosphate dependent enzyme family protein similar to aminocyclopropane-1-carboxylate deaminase that catalyzes a cyclopropane ring-opening reaction that leads to the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Acd COG2515
1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase, PLP-dependent ACC family ...
5-293 1.46e-77

1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase, PLP-dependent ACC family [Amino acid transport and metabolism];


:

Pssm-ID: 442005 [Multi-domain]  Cd Length: 317  Bit Score: 238.54  E-value: 1.46e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605   5 ELDWLQRA-GVELALLRLDQADPLISGNKGFKLAPHLALAREQGLDGLISLGGAHSNHLHALAGAGARFGFRCVGLLRGH 83
Cdd:COG2515    16 PLPRLSAAlGVELWIKRDDLTGPAIGGNKTRKLEYLLADALAQGADTLVTFGGAQSNHARATAAAAAKLGLKCVLVLRGE 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605  84 EVD--TPTVRDLRSLGMELHWLGYGGYRQRHAA--GFWLPWRERYPDLLPVAEGGGGLLGARGCIGLVERIATQLPTLGW 159
Cdd:COG2515    96 EPTplNGNLLLDRLLGAELHFVSRGEYRDRDEAmeAVAAELRARGGKPYVIPEGGSNPLGALGYVEAAAELAAQLAELGV 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605 160 dDYDAIWVAAGTGTTLAGLVLGEAG---RHPVVGALAVPEDHGVAAQVAATLAEA-----GWADTGYRLL-DASRGGFAR 230
Cdd:COG2515   176 -DFDYIVVASGSGGTLAGLVAGLALlgsDTRVIGISVLKGADFLRERVAELARATaallgLVSRADIELDdDYHGGGYGK 254
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1599837605 231 LDGRLARFIVEFETASGVALEPLYTGKLLLALREAVESGAVARGSRLVALHSGGLQGRRALQE 293
Cdd:COG2515   255 PTPELIEAIRLFARTEGILLDPVYTGKAMAGLIDLIRKGRFPPGSRVLFIHTGGLPGLFGYAE 317
 
Name Accession Description Interval E-value
Acd COG2515
1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase, PLP-dependent ACC family ...
5-293 1.46e-77

1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase, PLP-dependent ACC family [Amino acid transport and metabolism];


Pssm-ID: 442005 [Multi-domain]  Cd Length: 317  Bit Score: 238.54  E-value: 1.46e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605   5 ELDWLQRA-GVELALLRLDQADPLISGNKGFKLAPHLALAREQGLDGLISLGGAHSNHLHALAGAGARFGFRCVGLLRGH 83
Cdd:COG2515    16 PLPRLSAAlGVELWIKRDDLTGPAIGGNKTRKLEYLLADALAQGADTLVTFGGAQSNHARATAAAAAKLGLKCVLVLRGE 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605  84 EVD--TPTVRDLRSLGMELHWLGYGGYRQRHAA--GFWLPWRERYPDLLPVAEGGGGLLGARGCIGLVERIATQLPTLGW 159
Cdd:COG2515    96 EPTplNGNLLLDRLLGAELHFVSRGEYRDRDEAmeAVAAELRARGGKPYVIPEGGSNPLGALGYVEAAAELAAQLAELGV 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605 160 dDYDAIWVAAGTGTTLAGLVLGEAG---RHPVVGALAVPEDHGVAAQVAATLAEA-----GWADTGYRLL-DASRGGFAR 230
Cdd:COG2515   176 -DFDYIVVASGSGGTLAGLVAGLALlgsDTRVIGISVLKGADFLRERVAELARATaallgLVSRADIELDdDYHGGGYGK 254
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1599837605 231 LDGRLARFIVEFETASGVALEPLYTGKLLLALREAVESGAVARGSRLVALHSGGLQGRRALQE 293
Cdd:COG2515   255 PTPELIEAIRLFARTEGILLDPVYTGKAMAGLIDLIRKGRFPPGSRVLFIHTGGLPGLFGYAE 317
PRK03910 PRK03910
D-cysteine desulfhydrase; Validated
13-287 1.29e-19

D-cysteine desulfhydrase; Validated


Pssm-ID: 179673  Cd Length: 331  Bit Score: 87.19  E-value: 1.29e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605  13 GVELALLRLDQADPLISGNKGFKLAPHLALAREQGLDGLISLGGAHSNHLHALAGAGARFGFRCVGLLRGHEVDTPTVRD 92
Cdd:PRK03910   29 GPDIYIKRDDLTGLALGGNKTRKLEFLLADALAQGADTLITAGAIQSNHARQTAAAAAKLGLKCVLLLENPVPTEAENYL 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605  93 -------LRSLGMELHWLGYGGYR--QRHAAGFWLPWRERYPDLLPVAeggggLLGARGCIGLV---ERIATQLPTLGWd 160
Cdd:PRK03910  109 angnvllDDLFGAEIHVVPAGTDMdaQLEELAEELRAQGRRPYVIPVG-----GSNALGALGYVacaLEIAQQLAEGGV- 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605 161 DYDAIWVAAGTGTTLAGLVLGEAGRH---PVVG-------ALAVPEDHGVAAQVAATLAEAGW-ADTGYRLLDASRG-GF 228
Cdd:PRK03910  183 DFDAVVVASGSGGTHAGLAAGLAALGpdiPVIGvtvsrsaAEQEPKVAKLAQATAELLGLPTEiPRADIRLWDDYVGpGY 262
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1599837605 229 ARLDGRLARFIVEFETASGVALEPLYTGKLLLALREAVESGAVARGSRLVALHSGGLQG 287
Cdd:PRK03910  263 GVPTDEMLEAVKLLARTEGILLDPVYTGKAMAGLIDLIRQGRFKKGGNVLFIHTGGAPA 321
ACCD cd06449
Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme ...
28-284 1.72e-19

Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.


Pssm-ID: 107210  Cd Length: 307  Bit Score: 86.71  E-value: 1.72e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605  28 ISGNKGFKLAPHLALAREQGLDGLISLGGAHSNHLHALAGAGARFGFRCVGLLRGHEVDTPTVRDL-------RSLGMEL 100
Cdd:cd06449    32 FGGNKIRKLEYLLPDALAKGADTLVTVGGIQSNHTRQVAAVAAKLGLKCVLVQENWVPYSDAVYDRvgnillsRIMGADV 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605 101 HWLGYGGY-RQRHAAGFWLPWRERY---PDLLPvAEGGGGLLGARGCIGLVERIATQLPTLGWDdYDAIWVAAGTGTTLA 176
Cdd:cd06449   112 RLVSAGFDiGIRKSFEEAAEEVEAKggkPYVIP-AGGSEHPLGGLGYVGFVLEIAQQEEELGFK-FDSIVVCSVTGSTHA 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605 177 GLVLGEA--GRH-PVVG--ALAVPEDhgVAAQVAaTLAEAGWADTGYRLL--------DASRGGFARLDGRLARFIVEFE 243
Cdd:cd06449   190 GLSVGLAalGRQrRVIGidASAKPEK--TKAQVL-RIAQAKLAEEGLEVKeedvvlddDYAAPEYGIPNDETIEAIKLCA 266
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1599837605 244 TASGVALEPLYTGKLLLALREAVESGAVARGSRLVALHSGG 284
Cdd:cd06449   267 RLEGIITDPVYEGKSMQGMIDLVRNGEFKEGSKVLFIHLGG 307
ACC_deam_rel TIGR01275
pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; This model represents ...
13-295 2.08e-16

pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).


Pssm-ID: 273533 [Multi-domain]  Cd Length: 318  Bit Score: 77.93  E-value: 2.08e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605  13 GVELALLRLDQADPLISGNKGFKLAPHLALAREQGLDGLISLGGAHSNHLHALAGAGARFGFRCVGLLRGHEVDTPTVRD 92
Cdd:TIGR01275  21 GREIYIKRDDLTGLAMGGNKIRKLEFLLADALRKGADTVITAGAIQSNHARATAAVAAKLGLHCVLLLRNPIGTTAENYL 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605  93 L-------RSLGMELHWLGYGGY----RQRHAAGFWLPWRERYPDLLPVAeggggLLGARGCIGLVE---RIATQL-PTL 157
Cdd:TIGR01275 101 LngnllldDLFGAETRIESCEEYtdidAQLEELAERLEKEGFKPYVIPVG-----GSNSLGALGYVEaalEIAQQLeSEV 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605 158 GwddYDAIWVAAGTGTTLAGLVLGEAGRHPVVGALAVPEDHGVA---------AQVAATLAEAGWADTGYRLLDASRGGF 228
Cdd:TIGR01275 176 K---FDSIVVASGSGGTIAGLSLGLSHLMPDVELVGVTVSRFVAdqtdkfvnlVQAIAEGLELTVSAVIPLWDDYFGPGY 252
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1599837605 229 ARLDGRLARFIVEFETASGVALEPLYTGKLLLALREAVESGAVaRGSRLVALHSGGLQGRRALQERL 295
Cdd:TIGR01275 253 GVPTSEGMEIVKKVASLEGIILDPVYTGKAFYGLIDGIRKKEF-GDKPILFIHTGGIPGLFAYHDHL 318
PALP pfam00291
Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate ...
33-283 3.68e-08

Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4.


Pssm-ID: 459749 [Multi-domain]  Cd Length: 295  Bit Score: 53.47  E-value: 3.68e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605  33 GFKL--APHLALAREQGLDGLISLGGAHSNHLHALAGAGARFGFRCVGLLRGHeVDTPTVRDLRSLGMELHWLGyGGYRQ 110
Cdd:pfam00291  36 SFKDrgALNLLLRLKEGEGGKTVVEASSGNHGRALAAAAARLGLKVTIVVPED-APPGKLLLMRALGAEVVLVG-GDYDE 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605 111 RHAAGFWLpwRERYPDLLPVAEGGGGLLGArGCIGLVERIATQLPtlgwDDYDAIWVAAGTGTTLAGLVLGEAGRHPVVG 190
Cdd:pfam00291 114 AVAAAREL--AAEGPGAYYINQYDNPLNIE-GYGTIGLEILEQLG----GDPDAVVVPVGGGGLIAGIARGLKELGPDVR 186
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605 191 ALAV------------PEDHGVAAQVAATLAEA---GWADTGY--RLLDASRGGFARL-DGRLARFIVEFETASGVALEP 252
Cdd:pfam00291 187 VIGVepegapalarslAAGRPVPVPVADTIADGlgvGDEPGALalDLLDEYVGEVVTVsDEEALEAMRLLARREGIVVEP 266
                         250       260       270
                  ....*....|....*....|....*....|.
gi 1599837605 253 lYTGKLLLALReAVESGAVARGSRLVALHSG 283
Cdd:pfam00291 267 -SSAAALAALK-LALAGELKGGDRVVVVLTG 295
 
Name Accession Description Interval E-value
Acd COG2515
1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase, PLP-dependent ACC family ...
5-293 1.46e-77

1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase, PLP-dependent ACC family [Amino acid transport and metabolism];


Pssm-ID: 442005 [Multi-domain]  Cd Length: 317  Bit Score: 238.54  E-value: 1.46e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605   5 ELDWLQRA-GVELALLRLDQADPLISGNKGFKLAPHLALAREQGLDGLISLGGAHSNHLHALAGAGARFGFRCVGLLRGH 83
Cdd:COG2515    16 PLPRLSAAlGVELWIKRDDLTGPAIGGNKTRKLEYLLADALAQGADTLVTFGGAQSNHARATAAAAAKLGLKCVLVLRGE 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605  84 EVD--TPTVRDLRSLGMELHWLGYGGYRQRHAA--GFWLPWRERYPDLLPVAEGGGGLLGARGCIGLVERIATQLPTLGW 159
Cdd:COG2515    96 EPTplNGNLLLDRLLGAELHFVSRGEYRDRDEAmeAVAAELRARGGKPYVIPEGGSNPLGALGYVEAAAELAAQLAELGV 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605 160 dDYDAIWVAAGTGTTLAGLVLGEAG---RHPVVGALAVPEDHGVAAQVAATLAEA-----GWADTGYRLL-DASRGGFAR 230
Cdd:COG2515   176 -DFDYIVVASGSGGTLAGLVAGLALlgsDTRVIGISVLKGADFLRERVAELARATaallgLVSRADIELDdDYHGGGYGK 254
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1599837605 231 LDGRLARFIVEFETASGVALEPLYTGKLLLALREAVESGAVARGSRLVALHSGGLQGRRALQE 293
Cdd:COG2515   255 PTPELIEAIRLFARTEGILLDPVYTGKAMAGLIDLIRKGRFPPGSRVLFIHTGGLPGLFGYAE 317
PRK03910 PRK03910
D-cysteine desulfhydrase; Validated
13-287 1.29e-19

D-cysteine desulfhydrase; Validated


Pssm-ID: 179673  Cd Length: 331  Bit Score: 87.19  E-value: 1.29e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605  13 GVELALLRLDQADPLISGNKGFKLAPHLALAREQGLDGLISLGGAHSNHLHALAGAGARFGFRCVGLLRGHEVDTPTVRD 92
Cdd:PRK03910   29 GPDIYIKRDDLTGLALGGNKTRKLEFLLADALAQGADTLITAGAIQSNHARQTAAAAAKLGLKCVLLLENPVPTEAENYL 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605  93 -------LRSLGMELHWLGYGGYR--QRHAAGFWLPWRERYPDLLPVAeggggLLGARGCIGLV---ERIATQLPTLGWd 160
Cdd:PRK03910  109 angnvllDDLFGAEIHVVPAGTDMdaQLEELAEELRAQGRRPYVIPVG-----GSNALGALGYVacaLEIAQQLAEGGV- 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605 161 DYDAIWVAAGTGTTLAGLVLGEAGRH---PVVG-------ALAVPEDHGVAAQVAATLAEAGW-ADTGYRLLDASRG-GF 228
Cdd:PRK03910  183 DFDAVVVASGSGGTHAGLAAGLAALGpdiPVIGvtvsrsaAEQEPKVAKLAQATAELLGLPTEiPRADIRLWDDYVGpGY 262
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1599837605 229 ARLDGRLARFIVEFETASGVALEPLYTGKLLLALREAVESGAVARGSRLVALHSGGLQG 287
Cdd:PRK03910  263 GVPTDEMLEAVKLLARTEGILLDPVYTGKAMAGLIDLIRQGRFKKGGNVLFIHTGGAPA 321
ACCD cd06449
Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme ...
28-284 1.72e-19

Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.


Pssm-ID: 107210  Cd Length: 307  Bit Score: 86.71  E-value: 1.72e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605  28 ISGNKGFKLAPHLALAREQGLDGLISLGGAHSNHLHALAGAGARFGFRCVGLLRGHEVDTPTVRDL-------RSLGMEL 100
Cdd:cd06449    32 FGGNKIRKLEYLLPDALAKGADTLVTVGGIQSNHTRQVAAVAAKLGLKCVLVQENWVPYSDAVYDRvgnillsRIMGADV 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605 101 HWLGYGGY-RQRHAAGFWLPWRERY---PDLLPvAEGGGGLLGARGCIGLVERIATQLPTLGWDdYDAIWVAAGTGTTLA 176
Cdd:cd06449   112 RLVSAGFDiGIRKSFEEAAEEVEAKggkPYVIP-AGGSEHPLGGLGYVGFVLEIAQQEEELGFK-FDSIVVCSVTGSTHA 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605 177 GLVLGEA--GRH-PVVG--ALAVPEDhgVAAQVAaTLAEAGWADTGYRLL--------DASRGGFARLDGRLARFIVEFE 243
Cdd:cd06449   190 GLSVGLAalGRQrRVIGidASAKPEK--TKAQVL-RIAQAKLAEEGLEVKeedvvlddDYAAPEYGIPNDETIEAIKLCA 266
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1599837605 244 TASGVALEPLYTGKLLLALREAVESGAVARGSRLVALHSGG 284
Cdd:cd06449   267 RLEGIITDPVYEGKSMQGMIDLVRNGEFKEGSKVLFIHLGG 307
PRK14045 PRK14045
1-aminocyclopropane-1-carboxylate deaminase; Provisional
13-299 9.41e-18

1-aminocyclopropane-1-carboxylate deaminase; Provisional


Pssm-ID: 172537 [Multi-domain]  Cd Length: 329  Bit Score: 81.86  E-value: 9.41e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605  13 GVELALLRLDQADPLISGNKGFKLAPHLALAREQGLDGLISLGGAHSNHLHALAGAGARFGFRCVGLLRGHEVDTPTVRD 92
Cdd:PRK14045   35 GADVYVKRDDLTGLGIGGNKIRKLEYLLGDALSRGADVVITVGAVHSNHAFVTGLAAKKLGLDAVLVLRGKEELKGNYLL 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605  93 LRSLGMELhwlgyggyRQRHAAGFW------------LPWRERYPDLLPVAegGGGLLGARGCIGLVERIATQLPTLGWD 160
Cdd:PRK14045  115 DKIMGIET--------RVYEAKDSFelmkyaeevaeeLKGEGRKPYIIPPG--GASPVGTLGYVRAVGEIATQVKKLGVR 184
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605 161 dYDAIWVAAGTGTTLAGLVLGEA---GRHPVVGaLAVPEDHGVAAQVAATLAEAGWADTGY-------RLLDASRGGFAR 230
Cdd:PRK14045  185 -FDSIVVAVGSGGTLAGLSLGLAilnAEWRVVG-IAVGSFGEKMKEKVKNLVKKTKELLGVkvkvqepELYDYSFGEYGK 262
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1599837605 231 LDGRLARFIVEFETASGVALEPLYTGKLLLALREAVESGAVarGSRLVALHSGGLQGRRALQERLLALL 299
Cdd:PRK14045  263 ITKEVAKLIRSVGTMEGLILDPVYTGKAFYGLMDLAKKGEL--GEKILFIHTGGISGTFHYGDKMLSLL 329
ACC_deam_rel TIGR01275
pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; This model represents ...
13-295 2.08e-16

pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).


Pssm-ID: 273533 [Multi-domain]  Cd Length: 318  Bit Score: 77.93  E-value: 2.08e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605  13 GVELALLRLDQADPLISGNKGFKLAPHLALAREQGLDGLISLGGAHSNHLHALAGAGARFGFRCVGLLRGHEVDTPTVRD 92
Cdd:TIGR01275  21 GREIYIKRDDLTGLAMGGNKIRKLEFLLADALRKGADTVITAGAIQSNHARATAAVAAKLGLHCVLLLRNPIGTTAENYL 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605  93 L-------RSLGMELHWLGYGGY----RQRHAAGFWLPWRERYPDLLPVAeggggLLGARGCIGLVE---RIATQL-PTL 157
Cdd:TIGR01275 101 LngnllldDLFGAETRIESCEEYtdidAQLEELAERLEKEGFKPYVIPVG-----GSNSLGALGYVEaalEIAQQLeSEV 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605 158 GwddYDAIWVAAGTGTTLAGLVLGEAGRHPVVGALAVPEDHGVA---------AQVAATLAEAGWADTGYRLLDASRGGF 228
Cdd:TIGR01275 176 K---FDSIVVASGSGGTIAGLSLGLSHLMPDVELVGVTVSRFVAdqtdkfvnlVQAIAEGLELTVSAVIPLWDDYFGPGY 252
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1599837605 229 ARLDGRLARFIVEFETASGVALEPLYTGKLLLALREAVESGAVaRGSRLVALHSGGLQGRRALQERL 295
Cdd:TIGR01275 253 GVPTSEGMEIVKKVASLEGIILDPVYTGKAFYGLIDGIRKKEF-GDKPILFIHTGGIPGLFAYHDHL 318
PRK12390 PRK12390
1-aminocyclopropane-1-carboxylate deaminase; Provisional
30-284 6.58e-10

1-aminocyclopropane-1-carboxylate deaminase; Provisional


Pssm-ID: 183494  Cd Length: 337  Bit Score: 59.27  E-value: 6.58e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605  30 GNKGFKLAPHLALAREQGLDGLISLGGAHSNHLHALAGAGARFGFRCVgLLRGHEVDTPTVRDLRSLGMELHWLgYGGYR 109
Cdd:PRK12390   49 GNKTRKLEYLVPDALAQGADTLVSIGGVQSNHTRQVAAVAAHLGMKCV-LVQENWVNYEDAVYDRVGNILLSRI-MGADV 126
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605 110 QRHAAGFWLPWRERYPDLL---------PVAEGGGGLLGARGCIGLV---ERIATQLPTLGWdDYDAIWVAAGTGTTLAG 177
Cdd:PRK12390  127 RLVPDGFDIGIRKSWEDALedvraaggkPYAIPAGASDHPLGGLGFVgfaEEVRAQEAELGF-KFDYIVVCSVTGSTQAG 205
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605 178 LVLGEAG---RHPVVG--ALAVPEDhgVAAQVA------ATLAEAG-------------WADTGYRLLDASRGGFARLDG 233
Cdd:PRK12390  206 MVVGFAAdgrARRVIGidASAKPEQ--TRAQVLriarntAELVELGrditeddvvlderYAGPEYGLPNEGTLEAIRLCA 283
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1599837605 234 RLarfivefetaSGVALEPLYTGKLLLALREAVESGAVARGSRLVALHSGG 284
Cdd:PRK12390  284 RL----------EGMLTDPVYEGKSMHGMIDLVRKGEFPEGSKVLYAHLGG 324
PALP pfam00291
Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate ...
33-283 3.68e-08

Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4.


Pssm-ID: 459749 [Multi-domain]  Cd Length: 295  Bit Score: 53.47  E-value: 3.68e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605  33 GFKL--APHLALAREQGLDGLISLGGAHSNHLHALAGAGARFGFRCVGLLRGHeVDTPTVRDLRSLGMELHWLGyGGYRQ 110
Cdd:pfam00291  36 SFKDrgALNLLLRLKEGEGGKTVVEASSGNHGRALAAAAARLGLKVTIVVPED-APPGKLLLMRALGAEVVLVG-GDYDE 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605 111 RHAAGFWLpwRERYPDLLPVAEGGGGLLGArGCIGLVERIATQLPtlgwDDYDAIWVAAGTGTTLAGLVLGEAGRHPVVG 190
Cdd:pfam00291 114 AVAAAREL--AAEGPGAYYINQYDNPLNIE-GYGTIGLEILEQLG----GDPDAVVVPVGGGGLIAGIARGLKELGPDVR 186
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1599837605 191 ALAV------------PEDHGVAAQVAATLAEA---GWADTGY--RLLDASRGGFARL-DGRLARFIVEFETASGVALEP 252
Cdd:pfam00291 187 VIGVepegapalarslAAGRPVPVPVADTIADGlgvGDEPGALalDLLDEYVGEVVTVsDEEALEAMRLLARREGIVVEP 266
                         250       260       270
                  ....*....|....*....|....*....|.
gi 1599837605 253 lYTGKLLLALReAVESGAVARGSRLVALHSG 283
Cdd:pfam00291 267 -SSAAALAALK-LALAGELKGGDRVVVVLTG 295
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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