|
Name |
Accession |
Description |
Interval |
E-value |
| pcm |
PRK00312 |
protein-L-isoaspartate(D-aspartate) O-methyltransferase; |
1-211 |
1.10e-119 |
|
protein-L-isoaspartate(D-aspartate) O-methyltransferase;
Pssm-ID: 178974 [Multi-domain] Cd Length: 212 Bit Score: 338.33 E-value: 1.10e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 1 MTSQRTRERLIQRLYEEGLSNAHVLEVIRRTPRHLFVDEALSHRAYEDTALPIGHNQTISQPFMVARMTELLlAAGPLDK 80
Cdd:PRK00312 3 LMESERFARLVLRLRAEGILDERVLEAIEATPRELFVPEAFKHKAYENRALPIGCGQTISQPYMVARMTELL-ELKPGDR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 81 VMEIGTGSGYQTAVLAQLVERVFSVERIQALQDKAKERLAELNLRNVVFRWGDGWEGWSALAPYNGIIVTAAATEVPQSL 160
Cdd:PRK00312 82 VLEIGTGSGYQAAVLAHLVRRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGWPAYAPFDRILVTAAAPEIPRAL 161
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1598499954 161 LDQLAPGGRLVIPVGGGEVQQLMLIVRTEDGFSRQVLDSVRFVPLLNGPIA 211
Cdd:PRK00312 162 LEQLKEGGILVAPVGGEEQQLLTRVRKRGGRFEREVLEEVRFVPLVKGELA 212
|
|
| Pcm |
COG2518 |
Protein-L-isoaspartate O-methyltransferase [Posttranslational modification, protein turnover, ... |
11-208 |
2.93e-109 |
|
Protein-L-isoaspartate O-methyltransferase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 442008 [Multi-domain] Cd Length: 197 Bit Score: 311.25 E-value: 2.93e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 11 IQRLYEEGLSNAHVLEVIRRTPRHLFVDEALSHRAYEDTALPIGHNQTISQPFMVARMTELLlAAGPLDKVMEIGTGSGY 90
Cdd:COG2518 1 VQQLRPRGVTDPRVLDAMRAVPRELFVPEALRELAYADRALPIGHGQTISQPYIVARMLEAL-DLKPGDRVLEIGTGSGY 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 91 QTAVLAQLVERVFSVERIQALQDKAKERLAELNLRNVVFRWGDGWEGWSALAPYNGIIVTAAATEVPQSLLDQLAPGGRL 170
Cdd:COG2518 80 QAAVLARLAGRVYSVERDPELAERARERLAALGYDNVTVRVGDGALGWPEHAPFDRIIVTAAAPEVPEALLEQLAPGGRL 159
|
170 180 190
....*....|....*....|....*....|....*...
gi 1598499954 171 VIPVGGGEVQQLMLIVRTEDGFSRQVLDSVRFVPLLNG 208
Cdd:COG2518 160 VAPVGEGGVQRLVLITRTGDGFERESLFEVRFVPLRGG 197
|
|
| PCMT |
pfam01135 |
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); |
5-205 |
3.15e-75 |
|
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);
Pssm-ID: 395902 [Multi-domain] Cd Length: 205 Bit Score: 225.33 E-value: 3.15e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 5 RTRERLIQRLYEEG-LSNAHVLEVIRRTPRHLFVDEALSHRAYEDTALPIGHNQTISQPFMVARMTELL-LAAGplDKVM 82
Cdd:pfam01135 1 NRNEALIENLKNYGvIKSDKVAEAMLAVDREEFVPESFKSYAYEDIPLSIGYGQTISAPHMHAMMLELLeLKPG--MRVL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 83 EIGTGSGYQTAVLAQLVERVF---SVERIQALQDKAKERLAELNLRNVVFRWGDGWEGWSALAPYNGIIVTAAATEVPQS 159
Cdd:pfam01135 79 EIGSGSGYLTACFARMVGEVGrvvSIEHIPELVEIARRNLEKLGLENVIVVVGDGRQGWPEFAPYDAIHVGAAAPEIPEA 158
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1598499954 160 LLDQLAPGGRLVIPVGGGEVQQLMLIVRTEDG-FSRQVLDSVRFVPL 205
Cdd:pfam01135 159 LIDQLKEGGRLVIPVGPNGNQVLQQFDKRNDGsVVIKDLEGVRFVPL 205
|
|
| pimt |
TIGR00080 |
protein-L-isoaspartate(D-aspartate) O-methyltransferase; This is an all-kingdom (but not all ... |
1-208 |
1.08e-74 |
|
protein-L-isoaspartate(D-aspartate) O-methyltransferase; This is an all-kingdom (but not all species) full-length ortholog enzyme for repairing aging proteins. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. [Protein fate, Protein modification and repair]
Pssm-ID: 272896 [Multi-domain] Cd Length: 215 Bit Score: 224.32 E-value: 1.08e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 1 MTSQRTRERLIQRLYEEGLsNAH--VLEVIRRTPRHLFVDEALSHRAYEDTALPIGHNQTISQPFMVARMTELLlAAGPL 78
Cdd:TIGR00080 1 MDLESQKKALIDKLINEGY-IKSkrVIDALLSVPREEFVPEHFKEYAYVDTPLEIGYGQTISAPHMVAMMTELL-ELKPG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 79 DKVMEIGTGSGYQTAVLAQLVER---VFSVERIQALQDKAKERLAELNLRNVVFRWGDGWEGWSALAPYNGIIVTAAATE 155
Cdd:TIGR00080 79 MKVLEIGTGSGYQAAVLAEIVGRdglVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWEPLAPYDRIYVTAAGPK 158
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1598499954 156 VPQSLLDQLAPGGRLVIPVGGGEvQQLMLIVRTEDGFSRQVLDSVRFVPLLNG 208
Cdd:TIGR00080 159 IPEALIDQLKEGGILVMPVGEYL-QVLKRAEKRGGEIIIKDVEPVAFVPLVGG 210
|
|
| AdoMet_MTases |
cd02440 |
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ... |
80-174 |
1.70e-06 |
|
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).
Pssm-ID: 100107 [Multi-domain] Cd Length: 107 Bit Score: 45.11 E-value: 1.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 80 KVMEIGTGSGYQTAVLAQL-VERVFSVERIQALQDKAKERLAELNLRNVVFRWGDgWEGWSALAP--YNGIIVTAAATEV 156
Cdd:cd02440 1 RVLDLGCGTGALALALASGpGARVTGVDISPVALELARKAAAALLADNVEVLKGD-AEELPPEADesFDVIISDPPLHHL 79
|
90 100
....*....|....*....|....*
gi 1598499954 157 PQS-------LLDQLAPGGRLVIPV 174
Cdd:cd02440 80 VEDlarfleeARRLLKPGGVLVLTL 104
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| pcm |
PRK00312 |
protein-L-isoaspartate(D-aspartate) O-methyltransferase; |
1-211 |
1.10e-119 |
|
protein-L-isoaspartate(D-aspartate) O-methyltransferase;
Pssm-ID: 178974 [Multi-domain] Cd Length: 212 Bit Score: 338.33 E-value: 1.10e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 1 MTSQRTRERLIQRLYEEGLSNAHVLEVIRRTPRHLFVDEALSHRAYEDTALPIGHNQTISQPFMVARMTELLlAAGPLDK 80
Cdd:PRK00312 3 LMESERFARLVLRLRAEGILDERVLEAIEATPRELFVPEAFKHKAYENRALPIGCGQTISQPYMVARMTELL-ELKPGDR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 81 VMEIGTGSGYQTAVLAQLVERVFSVERIQALQDKAKERLAELNLRNVVFRWGDGWEGWSALAPYNGIIVTAAATEVPQSL 160
Cdd:PRK00312 82 VLEIGTGSGYQAAVLAHLVRRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGWPAYAPFDRILVTAAAPEIPRAL 161
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1598499954 161 LDQLAPGGRLVIPVGGGEVQQLMLIVRTEDGFSRQVLDSVRFVPLLNGPIA 211
Cdd:PRK00312 162 LEQLKEGGILVAPVGGEEQQLLTRVRKRGGRFEREVLEEVRFVPLVKGELA 212
|
|
| Pcm |
COG2518 |
Protein-L-isoaspartate O-methyltransferase [Posttranslational modification, protein turnover, ... |
11-208 |
2.93e-109 |
|
Protein-L-isoaspartate O-methyltransferase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 442008 [Multi-domain] Cd Length: 197 Bit Score: 311.25 E-value: 2.93e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 11 IQRLYEEGLSNAHVLEVIRRTPRHLFVDEALSHRAYEDTALPIGHNQTISQPFMVARMTELLlAAGPLDKVMEIGTGSGY 90
Cdd:COG2518 1 VQQLRPRGVTDPRVLDAMRAVPRELFVPEALRELAYADRALPIGHGQTISQPYIVARMLEAL-DLKPGDRVLEIGTGSGY 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 91 QTAVLAQLVERVFSVERIQALQDKAKERLAELNLRNVVFRWGDGWEGWSALAPYNGIIVTAAATEVPQSLLDQLAPGGRL 170
Cdd:COG2518 80 QAAVLARLAGRVYSVERDPELAERARERLAALGYDNVTVRVGDGALGWPEHAPFDRIIVTAAAPEVPEALLEQLAPGGRL 159
|
170 180 190
....*....|....*....|....*....|....*...
gi 1598499954 171 VIPVGGGEVQQLMLIVRTEDGFSRQVLDSVRFVPLLNG 208
Cdd:COG2518 160 VAPVGEGGVQRLVLITRTGDGFERESLFEVRFVPLRGG 197
|
|
| PCMT |
pfam01135 |
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); |
5-205 |
3.15e-75 |
|
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);
Pssm-ID: 395902 [Multi-domain] Cd Length: 205 Bit Score: 225.33 E-value: 3.15e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 5 RTRERLIQRLYEEG-LSNAHVLEVIRRTPRHLFVDEALSHRAYEDTALPIGHNQTISQPFMVARMTELL-LAAGplDKVM 82
Cdd:pfam01135 1 NRNEALIENLKNYGvIKSDKVAEAMLAVDREEFVPESFKSYAYEDIPLSIGYGQTISAPHMHAMMLELLeLKPG--MRVL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 83 EIGTGSGYQTAVLAQLVERVF---SVERIQALQDKAKERLAELNLRNVVFRWGDGWEGWSALAPYNGIIVTAAATEVPQS 159
Cdd:pfam01135 79 EIGSGSGYLTACFARMVGEVGrvvSIEHIPELVEIARRNLEKLGLENVIVVVGDGRQGWPEFAPYDAIHVGAAAPEIPEA 158
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1598499954 160 LLDQLAPGGRLVIPVGGGEVQQLMLIVRTEDG-FSRQVLDSVRFVPL 205
Cdd:pfam01135 159 LIDQLKEGGRLVIPVGPNGNQVLQQFDKRNDGsVVIKDLEGVRFVPL 205
|
|
| pimt |
TIGR00080 |
protein-L-isoaspartate(D-aspartate) O-methyltransferase; This is an all-kingdom (but not all ... |
1-208 |
1.08e-74 |
|
protein-L-isoaspartate(D-aspartate) O-methyltransferase; This is an all-kingdom (but not all species) full-length ortholog enzyme for repairing aging proteins. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. [Protein fate, Protein modification and repair]
Pssm-ID: 272896 [Multi-domain] Cd Length: 215 Bit Score: 224.32 E-value: 1.08e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 1 MTSQRTRERLIQRLYEEGLsNAH--VLEVIRRTPRHLFVDEALSHRAYEDTALPIGHNQTISQPFMVARMTELLlAAGPL 78
Cdd:TIGR00080 1 MDLESQKKALIDKLINEGY-IKSkrVIDALLSVPREEFVPEHFKEYAYVDTPLEIGYGQTISAPHMVAMMTELL-ELKPG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 79 DKVMEIGTGSGYQTAVLAQLVER---VFSVERIQALQDKAKERLAELNLRNVVFRWGDGWEGWSALAPYNGIIVTAAATE 155
Cdd:TIGR00080 79 MKVLEIGTGSGYQAAVLAEIVGRdglVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWEPLAPYDRIYVTAAGPK 158
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1598499954 156 VPQSLLDQLAPGGRLVIPVGGGEvQQLMLIVRTEDGFSRQVLDSVRFVPLLNG 208
Cdd:TIGR00080 159 IPEALIDQLKEGGILVMPVGEYL-QVLKRAEKRGGEIIIKDVEPVAFVPLVGG 210
|
|
| PRK13942 |
PRK13942 |
protein-L-isoaspartate O-methyltransferase; Provisional |
1-206 |
4.77e-66 |
|
protein-L-isoaspartate O-methyltransferase; Provisional
Pssm-ID: 184409 Cd Length: 212 Bit Score: 202.17 E-value: 4.77e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 1 MTSQRTRERLIQRLYEEGLSNAHVLEVIRRTPRHLFVDEALSHRAYEDTALPIGHNQTISQPFMVARMTELL-LAAGplD 79
Cdd:PRK13942 1 MPLEEKRRVIEELIREGYIKSKKVIDALLKVPRHLFVPEYLEEYAYVDTPLEIGYGQTISAIHMVAIMCELLdLKEG--M 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 80 KVMEIGTGSGYQTAVLAQLVER---VFSVERIQALQDKAKERLAELNLRNVVFRWGDGWEGWSALAPYNGIIVTAAATEV 156
Cdd:PRK13942 79 KVLEIGTGSGYHAAVVAEIVGKsgkVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGYEENAPYDRIYVTAAGPDI 158
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1598499954 157 PQSLLDQLAPGGRLVIPVgGGEVQQLMLIVRTEDGFSRQVLDSVRFVPLL 206
Cdd:PRK13942 159 PKPLIEQLKDGGIMVIPV-GSYSQELIRVEKDNGKIIKKKLGEVAFVPLI 207
|
|
| PRK13944 |
PRK13944 |
protein-L-isoaspartate O-methyltransferase; Provisional |
7-205 |
5.54e-41 |
|
protein-L-isoaspartate O-methyltransferase; Provisional
Pssm-ID: 140001 Cd Length: 205 Bit Score: 138.41 E-value: 5.54e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 7 RERLIQRLYEEG-LSNAHVLEVIRRTPRHLFVDEALSHRAYEDTALPIGHNQTISQPFMVARMTELLlAAGPLDKVMEIG 85
Cdd:PRK13944 2 AKRLVEELVREGiIKSERVKKAMLSVPREEFVMPEYRMMAYEDRPLPLFAGATISAPHMVAMMCELI-EPRPGMKILEVG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 86 TGSGYQTAVLAQLVER---VFSVERIQALQDKAKERLAELNLRNVVFRW-GDGWEGWSALAPYNGIIVTAAATEVPQSLL 161
Cdd:PRK13944 81 TGSGYQAAVCAEAIERrgkVYTVEIVKELAIYAAQNIERLGYWGVVEVYhGDGKRGLEKHAPFDAIIVTAAASTIPSALV 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1598499954 162 DQLAPGGRLVIPVGGGEVQQLMLIVRTEDGFSRQVLDSVRFVPL 205
Cdd:PRK13944 161 RQLKDGGVLVIPVEEGVGQVLYKVVKRGEKVEKRAITYVLFVPL 204
|
|
| methyltran_FxLD |
TIGR04364 |
methyltransferase, FxLD system; Members of this family resemble occur regularly in the ... |
5-174 |
1.63e-28 |
|
methyltransferase, FxLD system; Members of this family resemble occur regularly in the vicinity of lantibiotic biosynthesis enzymes and their probable target, the FxLD family of putative ribosomal natural product precursor (TIGR04363). Members resemble protein-L-isoaspartate O-methyltransferase (TIGR00080) and a predicted methyltranserase, TIGR04188, of another putative peptide modification system.
Pssm-ID: 275158 Cd Length: 394 Bit Score: 110.15 E-value: 1.63e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 5 RTRERLIQRLYEEG-LSNAHVLEVIRRTPRHLFVDEALSHRAYE-DTALPIGHNQT------ISQPFMVARMTELLlAAG 76
Cdd:TIGR04364 3 RLRAALVDELREDGvIRSPRVEAAFRTVPRHLFAPGAPLEKAYAaNRAVVTKRDEDgralssVSAPHIQAMMLEQA-GVE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 77 PLDKVMEIGTGsGYQTAVLAQLVE---RVFSVERIQALQDKAKERLAELNLRNVVFRWGDGWEGWSALAPYNGIIVTAAA 153
Cdd:TIGR04364 82 PGMRVLEIGSG-GYNAALLAELVGpsgEVTTVDIDEDVTDRARACLAAAGYPQVTVVLADAEAGVPELAPYDRIIVTVGA 160
|
170 180
....*....|....*....|.
gi 1598499954 154 TEVPQSLLDQLAPGGRLVIPV 174
Cdd:TIGR04364 161 WDIPPAWLDQLAPGGRLVVPL 181
|
|
| PRK13943 |
PRK13943 |
protein-L-isoaspartate O-methyltransferase; Provisional |
7-203 |
2.56e-26 |
|
protein-L-isoaspartate O-methyltransferase; Provisional
Pssm-ID: 237568 [Multi-domain] Cd Length: 322 Bit Score: 103.00 E-value: 2.56e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 7 RERLIQRLYEEGLSNaHVLEVIRRTPRHLFVDEA--LSHrAYEDTALPIGHNQ----TISQPFMVARMTELL-LAAGPld 79
Cdd:PRK13943 7 REKLFWILKKYGISD-HIAKAFLEVPREEFLTKSypLSY-VYEDIVLVSYDDGeeysTSSQPSLMALFMEWVgLDKGM-- 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 80 KVMEIGTGSGYQTAVLAQLVER---VFSVERIQALQDKAKERLAELNLRNVVFRWGDGWEGWSALAPYNGIIVTAAATEV 156
Cdd:PRK13943 83 RVLEIGGGTGYNAAVMSRVVGEkglVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVPEFAPYDVIFVTVGVDEV 162
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1598499954 157 PQSLLDQLAPGGRLVIPVGG--GEVQQLMLIVRTEDGFSRQVLDSVRFV 203
Cdd:PRK13943 163 PETWFTQLKEGGRVIVPINLklSRRQPAFLFKKKDPYLVGNYKLETRFI 211
|
|
| methyltr_grsp |
TIGR04188 |
methyltransferase, ATP-grasp peptide maturase system; Members of this protein family are ... |
10-191 |
5.04e-22 |
|
methyltransferase, ATP-grasp peptide maturase system; Members of this protein family are predicted SAM-dependent methyltransferases that regularly occur in the context of a putative peptide modification ATP-grasp enzyme (TIGR04187, related to enzymes of microviridin maturation) and a putative ribosomal peptide modification target (TIGR04186).
Pssm-ID: 275041 Cd Length: 363 Bit Score: 92.04 E-value: 5.04e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 10 LIQRLYEEG-LSNAHVLEVIRRTPRHLFV-----------------------DEALSHrAYEDTALPIGHNQTI------ 59
Cdd:TIGR04188 1 LAARLAAAGvLTDPAWREAVEAVPRHLFLpgfftqlpdgrgwrpvtadrpdpDEWLAL-VYSDETLVTQLDGDLaadaag 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 60 -----------SQPFMVARMTELL-LAAGPldKVMEIGTGSGYQTAVLAQLV--ERVFSVERIQALQDKAKERLAELNLR 125
Cdd:TIGR04188 80 gpvtgrptsssTQPSLVARMLEALdVEDGH--RVLEIGTGTGYSAALLCHRLgdDNVTSVEVDPGLAARAASALAAAGYA 157
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1598499954 126 NVVFRwGDGWEGWSALAPYNGIIVTAAATEVPQSLLDQLAPGGRLVIPVGGGEVQQLMLIVR-TEDG 191
Cdd:TIGR04188 158 PTVVT-GDGLLGHPPRAPYDRIIATCAVRRVPPAWLRQTRPGGVILTTLSGWLYGGGLVRLTvDDDG 223
|
|
| UbiE |
COG2226 |
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ... |
72-193 |
9.30e-07 |
|
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis
Pssm-ID: 441828 [Multi-domain] Cd Length: 143 Bit Score: 46.53 E-value: 9.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 72 LLAAGPLDKVMEIGTGSGYQTAVLAQLVERVFSVERIQALQDKAKERLAELNLrNVVFRWGDGWEGWSALAPYNGIIVTA 151
Cdd:COG2226 17 ALGLRPGARVLDLGCGTGRLALALAERGARVTGVDISPEMLELARERAAEAGL-NVEFVVGDAEDLPFPDGSFDLVISSF 95
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1598499954 152 AATEVP------QSLLDQLAPGGRLVI----PVGGGEVQQLMlivrTEDGFS 193
Cdd:COG2226 96 VLHHLPdperalAEIARVLKPGGRLVVvdfsPPDLAELEELL----AEAGFE 143
|
|
| UbiG |
COG2227 |
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ... |
56-172 |
1.01e-06 |
|
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 441829 [Multi-domain] Cd Length: 126 Bit Score: 46.16 E-value: 1.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 56 NQTISQPFMVARMTELLLAAGPLDK-VMEIGTGSGYQTAVLAQLVERVFSVERIQALQDKAKERLAELNLRnvvFRWGDG 134
Cdd:COG2227 2 SDPDARDFWDRRLAALLARLLPAGGrVLDVGCGTGRLALALARRGADVTGVDISPEALEIARERAAELNVD---FVQGDL 78
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1598499954 135 WEGWSALAPYNGIIVTAAATEVP------QSLLDQLAPGGRLVI 172
Cdd:COG2227 79 EDLPLEDGSFDLVICSEVLEHLPdpaallRELARLLKPGGLLLL 122
|
|
| AdoMet_MTases |
cd02440 |
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ... |
80-174 |
1.70e-06 |
|
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).
Pssm-ID: 100107 [Multi-domain] Cd Length: 107 Bit Score: 45.11 E-value: 1.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 80 KVMEIGTGSGYQTAVLAQL-VERVFSVERIQALQDKAKERLAELNLRNVVFRWGDgWEGWSALAP--YNGIIVTAAATEV 156
Cdd:cd02440 1 RVLDLGCGTGALALALASGpGARVTGVDISPVALELARKAAAALLADNVEVLKGD-AEELPPEADesFDVIISDPPLHHL 79
|
90 100
....*....|....*....|....*
gi 1598499954 157 PQS-------LLDQLAPGGRLVIPV 174
Cdd:cd02440 80 VEDlarfleeARRLLKPGGVLVLTL 104
|
|
| Tam |
COG4106 |
Trans-aconitate methyltransferase [Energy production and conversion]; |
81-172 |
3.82e-06 |
|
Trans-aconitate methyltransferase [Energy production and conversion];
Pssm-ID: 443282 [Multi-domain] Cd Length: 100 Bit Score: 44.04 E-value: 3.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 81 VMEIGTGSGYQTAVLAQLVE--RVFSVERIQALQDKAKERLAelnlrNVVFRWGDgWEGWSALAPYNGIIVTAAATEVP- 157
Cdd:COG4106 5 VLDLGCGTGRLTALLAERFPgaRVTGVDLSPEMLARARARLP-----NVRFVVAD-LRDLDPPEPFDLVVSNAALHWLPd 78
|
90 100
....*....|....*....|
gi 1598499954 158 -----QSLLDQLAPGGRLVI 172
Cdd:COG4106 79 haallARLAAALAPGGVLAV 98
|
|
| Cfa |
COG2230 |
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport ... |
67-172 |
9.02e-06 |
|
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism];
Pssm-ID: 441831 [Multi-domain] Cd Length: 158 Bit Score: 44.15 E-value: 9.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 67 RMTELLLAAGPL---DKVMEIGTGSGYQTAVLAQLVE-RVFSVERIQALQDKAKERLAELNLRNVV-FRWGDgWEGWSAL 141
Cdd:COG2230 38 AKLDLILRKLGLkpgMRVLDIGCGWGGLALYLARRYGvRVTGVTLSPEQLEYARERAAEAGLADRVeVRLAD-YRDLPAD 116
|
90 100 110
....*....|....*....|....*....|....*....
gi 1598499954 142 APYNGIIVTAAATEVP--------QSLLDQLAPGGRLVI 172
Cdd:COG2230 117 GQFDAIVSIGMFEHVGpenypayfAKVARLLKPGGRLLL 155
|
|
| Gcd14 |
COG2519 |
tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]; tRNA A58 ... |
76-172 |
9.23e-06 |
|
tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]; tRNA A58 N-methylase Trm61 is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 442009 [Multi-domain] Cd Length: 249 Bit Score: 45.15 E-value: 9.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 76 GPLDKVMEIGTGSGYQTAVLAQLV---ERVFSVERIQALQDKAKERLAELNL-RNVVFRWGDGWEGWSA----------L 141
Cdd:COG2519 90 FPGARVLEAGTGSGALTLALARAVgpeGKVYSYERREDFAEIARKNLERFGLpDNVELKLGDIREGIDEgdvdavfldmP 169
|
90 100 110
....*....|....*....|....*....|.
gi 1598499954 142 APYNgiIVTAAAtevpqsllDQLAPGGRLVI 172
Cdd:COG2519 170 DPWE--ALEAVA--------KALKPGGVLVA 190
|
|
| SmtA |
COG0500 |
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, ... |
80-172 |
4.88e-05 |
|
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only];
Pssm-ID: 440266 [Multi-domain] Cd Length: 199 Bit Score: 42.60 E-value: 4.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 80 KVMEIGTGSGYQTAVLAQL-VERVFSVERIQALQDKAKERLAELNLRNVVFRWGDgWEGWSAL--APYNGIIVTAAATEV 156
Cdd:COG0500 29 RVLDLGCGTGRNLLALAARfGGRVIGIDLSPEAIALARARAAKAGLGNVEFLVAD-LAELDPLpaESFDLVVAFGVLHHL 107
|
90 100
....*....|....*....|....
gi 1598499954 157 P--------QSLLDQLAPGGRLVI 172
Cdd:COG0500 108 PpeereallRELARALKPGGVLLL 131
|
|
| Methyltransf_31 |
pfam13847 |
Methyltransferase domain; This family appears to have methyltransferase activity. |
80-172 |
5.01e-05 |
|
Methyltransferase domain; This family appears to have methyltransferase activity.
Pssm-ID: 463998 [Multi-domain] Cd Length: 150 Bit Score: 42.02 E-value: 5.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 80 KVMEIGTGSGYQTAVLAQLVE---RVFSVERIQALQDKAKERLAELNLRNVVFRWGDgWE---GWSALAPYNGIIVTAAA 153
Cdd:pfam13847 6 RVLDLGCGTGHLSFELAEELGpnaEVVGIDISEEAIEKARENAQKLGFDNVEFEQGD-IEelpELLEDDKFDVVISNCVL 84
|
90 100
....*....|....*....|....*
gi 1598499954 154 TEVP------QSLLDQLAPGGRLVI 172
Cdd:pfam13847 85 NHIPdpdkvlQEILRVLKPGGRLII 109
|
|
| RsmC |
COG2813 |
16S rRNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis]; 16S rRNA ... |
69-172 |
6.40e-05 |
|
16S rRNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis]; 16S rRNA G1207 methylase RsmC is part of the Pathway/BioSystem: 16S rRNA modification
Pssm-ID: 442062 [Multi-domain] Cd Length: 191 Bit Score: 42.10 E-value: 6.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 69 TELLLAAGPL---DKVMEIGTGSGYQTAVLAQLvervFSVERIQALqDK-------AKERLAELNLRNVVFRWGDGWEGW 138
Cdd:COG2813 38 TRLLLEHLPEplgGRVLDLGCGYGVIGLALAKR----NPEARVTLV-DVnaravelARANAAANGLENVEVLWSDGLSGV 112
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1598499954 139 SAlAPYNGIIV-------TAAATEVPQSLLDQ----LAPGGRLVI 172
Cdd:COG2813 113 PD-GSFDLILSnppfhagRAVDKEVAHALIADaarhLRPGGELWL 156
|
|
| MTS |
pfam05175 |
Methyltransferase small domain; This domain is found in ribosomal RNA small subunit ... |
69-172 |
2.37e-04 |
|
Methyltransferase small domain; This domain is found in ribosomal RNA small subunit methyltransferase C as well as other methyltransferases.
Pssm-ID: 428349 [Multi-domain] Cd Length: 170 Bit Score: 40.27 E-value: 2.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 69 TELLLAAGPLD---KVMEIGTGSGYQTAVLAQL---VERVFSVERIQALqDKAKERLAELNLRNVVFRWGDGWEGWSAlA 142
Cdd:pfam05175 20 SRLLLEHLPKDlsgKVLDLGCGAGVLGAALAKEspdAELTMVDINARAL-ESARENLAANGLENGEVVASDVYSGVED-G 97
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1598499954 143 PYNGII-----------VTAAATEVPQSLLDQLAPGGRLVI 172
Cdd:pfam05175 98 KFDLIIsnppfhaglatTYNVAQRFIADAKRHLRPGGELWI 138
|
|
| PRK08317 |
PRK08317 |
hypothetical protein; Provisional |
72-172 |
3.62e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 181382 [Multi-domain] Cd Length: 241 Bit Score: 40.31 E-value: 3.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 72 LLAAGPLDKVMEIGTGSGYQTAVLAQLVE---RVFSVERIQALQDKAKERLAElNLRNVVFRWGDGwegwSALaPYNGII 148
Cdd:PRK08317 14 LLAVQPGDRVLDVGCGPGNDARELARRVGpegRVVGIDRSEAMLALAKERAAG-LGPNVEFVRGDA----DGL-PFPDGS 87
|
90 100 110
....*....|....*....|....*....|....*
gi 1598499954 149 VTAA-ATEV------PQSLLDQLA----PGGRLVI 172
Cdd:PRK08317 88 FDAVrSDRVlqhledPARALAEIArvlrPGGRVVV 122
|
|
| TrmR |
COG4122 |
tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; ... |
71-134 |
1.44e-03 |
|
tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; tRNA 5-hydroxyU34 O-methylase TrmR/YrrM is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 443298 Cd Length: 173 Bit Score: 37.86 E-value: 1.44e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1598499954 71 LLLAAGPlDKVMEIGTGSGYQTAVLAQLVE---RVFSVERIQALQDKAKERLAELNLRNVV-FRWGDG 134
Cdd:COG4122 11 LARLLGA-KRILEIGTGTGYSTLWLARALPddgRLTTIEIDPERAAIARENFARAGLADRIrLILGDA 77
|
|
| PRK14968 |
PRK14968 |
putative methyltransferase; Provisional |
69-106 |
1.60e-03 |
|
putative methyltransferase; Provisional
Pssm-ID: 237872 [Multi-domain] Cd Length: 188 Bit Score: 37.96 E-value: 1.60e-03
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 1598499954 69 TELL---LAAGPLDKVMEIGTGSGYQTAVLAQLVERVFSVE 106
Cdd:PRK14968 12 SFLLaenAVDKKGDRVLEVGTGSGIVAIVAAKNGKKVVGVD 52
|
|
| Methyltransf_25 |
pfam13649 |
Methyltransferase domain; This family appears to be a methyltransferase domain. |
81-168 |
1.65e-03 |
|
Methyltransferase domain; This family appears to be a methyltransferase domain.
Pssm-ID: 463945 [Multi-domain] Cd Length: 96 Bit Score: 36.39 E-value: 1.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598499954 81 VMEIGTGSGYQTAVLAQLVE-RVFSVERIQALQDKAKERLAELNLrNVVFRWGDGWEGWSALAPYNGIIVTAAATEVPQS 159
Cdd:pfam13649 1 VLDLGCGTGRLTLALARRGGaRVTGVDLSPEMLERARERAAEAGL-NVEFVQGDAEDLPFPDGSFDLVVSSGVLHHLPDP 79
|
90
....*....|....*..
gi 1598499954 160 LLDQ--------LAPGG 168
Cdd:pfam13649 80 DLEAalreiarvLKPGG 96
|
|
| ksgA |
PRK14896 |
16S ribosomal RNA methyltransferase A; |
77-133 |
2.26e-03 |
|
16S ribosomal RNA methyltransferase A;
Pssm-ID: 237852 [Multi-domain] Cd Length: 258 Bit Score: 37.96 E-value: 2.26e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 1598499954 77 PLDKVMEIGTGSGYQTAVLAQLVERVFSVERIQALQDKAKERLAELNlrNVVFRWGD 133
Cdd:PRK14896 29 DGDPVLEIGPGKGALTDELAKRAKKVYAIELDPRLAEFLRDDEIAAG--NVEIIEGD 83
|
|
| |
