|
Name |
Accession |
Description |
Interval |
E-value |
| ARO8 |
COG1167 |
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain ... |
20-426 |
1.75e-72 |
|
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain is part of the Pathway/BioSystem: Lysine biosynthesis
Pssm-ID: 440781 [Multi-domain] Cd Length: 471 Bit Score: 235.49 E-value: 1.75e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 20 RGIALETSALIRAGVLPIGTRLPAIRDIAYELHVSPATISEAWSELRRQKIISGRGRNGTWVSGDRFVAKPE-------- 91
Cdd:COG1167 15 LQLADALREAILSGRLPPGDRLPSSRELAAQLGVSRSTVVRAYEELEAEGLIESRPGSGTFVAARLPAPAPApraaaava 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 92 --RLASSGNYRAGVLDLTLAGPDAALLP--RLAEAMAYGASVDD--LNSYERSRIVPELKDAVSER-----WPYEAEAFL 160
Cdd:COG1167 95 apALRRLLEAAPGVIDLGSGAPDPDLFPlaALRRALRRALRRLPpaLLGYGDPQGLPELREAIARYlarrgVPASPDQIL 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 161 ATNGGYNAVYTILHALVSPGSSVAIEHPTAMRLLDILEDLGVKIIPVACDDDGPLPASLSEALRQ-RPAAFLFQPRLHSV 239
Cdd:COG1167 175 ITSGAQQALDLALRALLRPGDTVAVESPTYPGALAALRAAGLRLVPVPVDEDGLDLDALEAALRRhRPRAVYVTPSHQNP 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 240 TGVTVSSSRLDQLGDVLEDSDTLIIEDDGVGDVSTAAP-----QSLGGrfAERTIHILSLSKSLGPDLRLAVLSSSAPIV 314
Cdd:COG1167 255 TGATMSLERRRALLELARRHGVPIIEDDYDSELRYDGRpppplAALDA--PGRVIYIGSFSKTLAPGLRLGYLVAPGRLI 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 315 DQIQSYRSFSAGWTSRILQGAAAWLLRDPATWQLIGEAREIYQQRRDALADALSERG-----IPIPAGqGLCLWVPvVSE 389
Cdd:COG1167 333 ERLARLKRATDLGTSPLTQLALAEFLESGHYDRHLRRLRREYRARRDLLLAALARHLpdglrVTGPPG-GLHLWLE-LPE 410
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1582227625 390 PFAMVTLA----ARNIAVNPGSKFSVL--PSSHIRVATSTLND 426
Cdd:COG1167 411 GVDAEALAaaalARGILVAPGSAFSADgpPRNGLRLGFGAPSE 453
|
|
| PRK15481 |
PRK15481 |
transcriptional regulatory protein PtsJ; Provisional |
11-426 |
9.67e-58 |
|
transcriptional regulatory protein PtsJ; Provisional
Pssm-ID: 185378 [Multi-domain] Cd Length: 431 Bit Score: 195.65 E-value: 9.67e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 11 AEKIADrSIRgialetsALIRAGVLPIGTRLPAIRDIAYELHVSPATISEAWSELRRQKIISGRGRNGTWVSGdrfvaKP 90
Cdd:PRK15481 7 ANEIFD-SIR-------QLIQAGRLRPGDSLPPVRELASELGVNRNTVAAAYKRLVTAGLAQSQGRNGTVIRG-----SP 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 91 ERLASSGNYRAGVL-DLTLAGPDAALLPRLAEAMAYGASVDDLnsYERSRIVPELKdAVSERW-------PYEAEAflaT 162
Cdd:PRK15481 74 SPVALEGGDPGTPLhDLAGGNPDPQRLPDLSRYFARLSRTPRL--YGDAPVSPELH-AWAARWlrddcpvAFEIDL---T 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 163 NGGYNAVYTILHALVSPGSSVAIEHPTAMRLLDILEDLGVKIIPVACDDDGPLPASLSEALRQRPAAFLFQPRLHSVTGV 242
Cdd:PRK15481 148 SGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEGMQPEKLERALAQGARAVILTPRAHNPTGC 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 243 TVSSSRLDQLGDVLED-SDTLIIEDDGVGDVSTAAPQSLGGRFAERTIHILSLSKSLGPDLRLAVLSSSAPIVDQIQSYR 321
Cdd:PRK15481 228 SLSARRAAALRNLLARyPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALGPDLRLAFVASDSATSARLRLRL 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 322 SFSAGWTSRILQGAAAWLLRDPATWQLIGEAREIYQQRRDALADALSERGIPIPA-GQGLCLWVP--VVSEPFAMvTLAA 398
Cdd:PRK15481 308 NSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAIPSpGDGLNLWLPldTDSQATAL-TLAK 386
|
410 420
....*....|....*....|....*....
gi 1582227625 399 RNIAVNPGSKFSVLPSSH-IRVATSTLND 426
Cdd:PRK15481 387 SGWLVREGEAFGVSAPSHgLRITLSTLND 415
|
|
| AAT_like |
cd00609 |
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent ... |
104-430 |
3.27e-47 |
|
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein.
Pssm-ID: 99734 [Multi-domain] Cd Length: 350 Bit Score: 165.59 E-value: 3.27e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 104 LDLTLAGPDAALLPRLAEAMAYGASVDDLNSYERSRIVPELKDAVSER------WPYEAEAFLATNGGYNAVYTILHALV 177
Cdd:cd00609 1 IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWlgrrggVDVPPEEIVVTNGAQEALSLLLRALL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 178 SPGSSVAIEHPTAMRLLDILEDLGVKIIPVACDDDG---PLPASLSEALRQRPAAFLFQPrLHSVTGVTVSSSRLDQLGD 254
Cdd:cd00609 81 NPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGgflLDLELLEAAKTPKTKLLYLNN-PNNPTGAVLSEEELEELAE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 255 VLEDSDTLIIEDD---GVGDVSTAAPQSLGGRFAERTIHILSLSKSLG-PDLRLA-VLSSSAPIVDQIQSYRSFSAGWTS 329
Cdd:cd00609 160 LAKKHGILIISDEayaELVYDGEPPPALALLDAYERVIVLRSFSKTFGlPGLRIGyLIAPPEELLERLKKLLPYTTSGPS 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 330 RILQGAAAWLLRDPATWqlIGEAREIYQQRRDALADALSERG--IPIPAGQGLCLWVPV---VSEPFAMVTLAARNIAVN 404
Cdd:cd00609 240 TLSQAAAAAALDDGEEH--LEELRERYRRRRDALLEALKELGplVVVKPSGGFFLWLDLpegDDEEFLERLLLEAGVVVR 317
|
330 340
....*....|....*....|....*.
gi 1582227625 405 PGSKFSVLPSSHIRVATSTLNDRCEE 430
Cdd:cd00609 318 PGSAFGEGGEGFVRLSFATPEEELEE 343
|
|
| Aminotran_1_2 |
pfam00155 |
Aminotransferase class I and II; |
101-426 |
1.50e-22 |
|
Aminotransferase class I and II;
Pssm-ID: 395103 [Multi-domain] Cd Length: 351 Bit Score: 98.15 E-value: 1.50e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 101 AGVLDLTLAGPDAALLPRLAEAMAYGASVDDLNSYERSRIVPELKDAVSERW------PYEAEAFLATNGGYNAV-YTIL 173
Cdd:pfam00155 1 TDKINLGSNEYLGDTLPAVAKAEKDALAGGTRNLYGPTDGHPELREALAKFLgrspvlKLDREAAVVFGSGAGANiEALI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 174 HALVSPGSSVAIEHPTAMRLLDILEDLGVKIIPVAC---DDDGPLPASLSEALRQRPAaFLFQPRLHSVTGVTVSSSRLD 250
Cdd:pfam00155 81 FLLANPGDAILVPAPTYASYIRIARLAGGEVVRYPLydsNDFHLDFDALEAALKEKPK-VVLHTSPHNPTGTVATLEELE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 251 QLGDVLEDSDTLIIED----DGVGDVSTAAPQSLggrFAERTIHIL---SLSKSLG-PDLRLAVLSSSAPIVDQIQSYRS 322
Cdd:pfam00155 160 KLLDLAKEHNILLLVDeayaGFVFGSPDAVATRA---LLAEGPNLLvvgSFSKAFGlAGWRVGYILGNAAVISQLRKLAR 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 323 FsaGWTSRILQGAAAWLLRDPATWQLIGEA-REIYQQRRDALADALSERGIPIPAGQ-GLCLWV---PVVSEPFAMVTLA 397
Cdd:pfam00155 237 P--FYSSTHLQAAAAAALSDPLLVASELEEmRQRIKERRDYLRDGLQAAGLSVLPSQaGFFLLTgldPETAKELAQVLLE 314
|
330 340
....*....|....*....|....*....
gi 1582227625 398 ARNIAVNPGSKFSVlpSSHIRVATSTLND 426
Cdd:pfam00155 315 EVGVYVTPGSSPGV--PGWLRITVAGGTE 341
|
|
| HTH_GNTR |
smart00345 |
helix_turn_helix gluconate operon transcriptional repressor; |
22-81 |
2.43e-09 |
|
helix_turn_helix gluconate operon transcriptional repressor;
Pssm-ID: 197669 [Multi-domain] Cd Length: 60 Bit Score: 52.96 E-value: 2.43e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 22 IALETSALIRAGVLPIGTRLPAIRDIAYELHVSPATISEAWSELRRQKIISGRGRNGTWV 81
Cdd:smart00345 1 VAERLREDIVSGELRPGDKLPSERELAAQLGVSRTTVREALSRLEAEGLVQRRPGSGTFV 60
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| ARO8 |
COG1167 |
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain ... |
20-426 |
1.75e-72 |
|
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain is part of the Pathway/BioSystem: Lysine biosynthesis
Pssm-ID: 440781 [Multi-domain] Cd Length: 471 Bit Score: 235.49 E-value: 1.75e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 20 RGIALETSALIRAGVLPIGTRLPAIRDIAYELHVSPATISEAWSELRRQKIISGRGRNGTWVSGDRFVAKPE-------- 91
Cdd:COG1167 15 LQLADALREAILSGRLPPGDRLPSSRELAAQLGVSRSTVVRAYEELEAEGLIESRPGSGTFVAARLPAPAPApraaaava 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 92 --RLASSGNYRAGVLDLTLAGPDAALLP--RLAEAMAYGASVDD--LNSYERSRIVPELKDAVSER-----WPYEAEAFL 160
Cdd:COG1167 95 apALRRLLEAAPGVIDLGSGAPDPDLFPlaALRRALRRALRRLPpaLLGYGDPQGLPELREAIARYlarrgVPASPDQIL 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 161 ATNGGYNAVYTILHALVSPGSSVAIEHPTAMRLLDILEDLGVKIIPVACDDDGPLPASLSEALRQ-RPAAFLFQPRLHSV 239
Cdd:COG1167 175 ITSGAQQALDLALRALLRPGDTVAVESPTYPGALAALRAAGLRLVPVPVDEDGLDLDALEAALRRhRPRAVYVTPSHQNP 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 240 TGVTVSSSRLDQLGDVLEDSDTLIIEDDGVGDVSTAAP-----QSLGGrfAERTIHILSLSKSLGPDLRLAVLSSSAPIV 314
Cdd:COG1167 255 TGATMSLERRRALLELARRHGVPIIEDDYDSELRYDGRpppplAALDA--PGRVIYIGSFSKTLAPGLRLGYLVAPGRLI 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 315 DQIQSYRSFSAGWTSRILQGAAAWLLRDPATWQLIGEAREIYQQRRDALADALSERG-----IPIPAGqGLCLWVPvVSE 389
Cdd:COG1167 333 ERLARLKRATDLGTSPLTQLALAEFLESGHYDRHLRRLRREYRARRDLLLAALARHLpdglrVTGPPG-GLHLWLE-LPE 410
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1582227625 390 PFAMVTLA----ARNIAVNPGSKFSVL--PSSHIRVATSTLND 426
Cdd:COG1167 411 GVDAEALAaaalARGILVAPGSAFSADgpPRNGLRLGFGAPSE 453
|
|
| PRK15481 |
PRK15481 |
transcriptional regulatory protein PtsJ; Provisional |
11-426 |
9.67e-58 |
|
transcriptional regulatory protein PtsJ; Provisional
Pssm-ID: 185378 [Multi-domain] Cd Length: 431 Bit Score: 195.65 E-value: 9.67e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 11 AEKIADrSIRgialetsALIRAGVLPIGTRLPAIRDIAYELHVSPATISEAWSELRRQKIISGRGRNGTWVSGdrfvaKP 90
Cdd:PRK15481 7 ANEIFD-SIR-------QLIQAGRLRPGDSLPPVRELASELGVNRNTVAAAYKRLVTAGLAQSQGRNGTVIRG-----SP 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 91 ERLASSGNYRAGVL-DLTLAGPDAALLPRLAEAMAYGASVDDLnsYERSRIVPELKdAVSERW-------PYEAEAflaT 162
Cdd:PRK15481 74 SPVALEGGDPGTPLhDLAGGNPDPQRLPDLSRYFARLSRTPRL--YGDAPVSPELH-AWAARWlrddcpvAFEIDL---T 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 163 NGGYNAVYTILHALVSPGSSVAIEHPTAMRLLDILEDLGVKIIPVACDDDGPLPASLSEALRQRPAAFLFQPRLHSVTGV 242
Cdd:PRK15481 148 SGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEGMQPEKLERALAQGARAVILTPRAHNPTGC 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 243 TVSSSRLDQLGDVLED-SDTLIIEDDGVGDVSTAAPQSLGGRFAERTIHILSLSKSLGPDLRLAVLSSSAPIVDQIQSYR 321
Cdd:PRK15481 228 SLSARRAAALRNLLARyPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALGPDLRLAFVASDSATSARLRLRL 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 322 SFSAGWTSRILQGAAAWLLRDPATWQLIGEAREIYQQRRDALADALSERGIPIPA-GQGLCLWVP--VVSEPFAMvTLAA 398
Cdd:PRK15481 308 NSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAIPSpGDGLNLWLPldTDSQATAL-TLAK 386
|
410 420
....*....|....*....|....*....
gi 1582227625 399 RNIAVNPGSKFSVLPSSH-IRVATSTLND 426
Cdd:PRK15481 387 SGWLVREGEAFGVSAPSHgLRITLSTLND 415
|
|
| AAT_like |
cd00609 |
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent ... |
104-430 |
3.27e-47 |
|
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein.
Pssm-ID: 99734 [Multi-domain] Cd Length: 350 Bit Score: 165.59 E-value: 3.27e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 104 LDLTLAGPDAALLPRLAEAMAYGASVDDLNSYERSRIVPELKDAVSER------WPYEAEAFLATNGGYNAVYTILHALV 177
Cdd:cd00609 1 IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWlgrrggVDVPPEEIVVTNGAQEALSLLLRALL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 178 SPGSSVAIEHPTAMRLLDILEDLGVKIIPVACDDDG---PLPASLSEALRQRPAAFLFQPrLHSVTGVTVSSSRLDQLGD 254
Cdd:cd00609 81 NPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGgflLDLELLEAAKTPKTKLLYLNN-PNNPTGAVLSEEELEELAE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 255 VLEDSDTLIIEDD---GVGDVSTAAPQSLGGRFAERTIHILSLSKSLG-PDLRLA-VLSSSAPIVDQIQSYRSFSAGWTS 329
Cdd:cd00609 160 LAKKHGILIISDEayaELVYDGEPPPALALLDAYERVIVLRSFSKTFGlPGLRIGyLIAPPEELLERLKKLLPYTTSGPS 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 330 RILQGAAAWLLRDPATWqlIGEAREIYQQRRDALADALSERG--IPIPAGQGLCLWVPV---VSEPFAMVTLAARNIAVN 404
Cdd:cd00609 240 TLSQAAAAAALDDGEEH--LEELRERYRRRRDALLEALKELGplVVVKPSGGFFLWLDLpegDDEEFLERLLLEAGVVVR 317
|
330 340
....*....|....*....|....*.
gi 1582227625 405 PGSKFSVLPSSHIRVATSTLNDRCEE 430
Cdd:cd00609 318 PGSAFGEGGEGFVRLSFATPEEELEE 343
|
|
| AspB |
COG0436 |
Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; ... |
85-430 |
1.37e-30 |
|
Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; Aspartate/methionine/tyrosine aminotransferase is part of the Pathway/BioSystem: Isoleucine, leucine, valine biosynthesis
Pssm-ID: 440205 [Multi-domain] Cd Length: 387 Bit Score: 121.39 E-value: 1.37e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 85 RFVAKPERLASSGnyrAGVLDLTLAGPDAALLPRLAEAMAYGASvDDLNSYERSRIVPELKDAVSERW------PYEAEA 158
Cdd:COG0436 17 EVSALAAELKAAG---EDVIDLGIGEPDFPTPDHIREAAIEALD-DGVTGYTPSAGIPELREAIAAYYkrrygvDLDPDE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 159 FLATNGGYNAVYTILHALVSPGSSVAI------EHPTAMRLLdiledlGVKIIPVACD-DDG--PLPASLSEALRQRPAA 229
Cdd:COG0436 93 ILVTNGAKEALALALLALLNPGDEVLVpdpgypSYRAAVRLA------GGKPVPVPLDeENGflPDPEALEAAITPRTKA 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 230 FLF----QPrlhsvTGVTVSSSRLDQLGDVLEDSDTLIIED--------DGVGDVSTAapqSLGGrFAERTIHILSLSKS 297
Cdd:COG0436 167 IVLnspnNP-----TGAVYSREELEALAELAREHDLLVISDeiyeelvyDGAEHVSIL---SLPG-LKDRTIVINSFSKS 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 298 LG-PDLRLAVLSSSAPIVDQIQSYRSFSAGWTSRILQGAAAWLLRDPATWqlIGEAREIYQQRRDALADALSERGIPIPA 376
Cdd:COG0436 238 YAmTGWRIGYAVGPPELIAALLKLQSNLTSCAPTPAQYAAAAALEGPQDY--VEEMRAEYRRRRDLLVEGLNEIGLSVVK 315
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 377 GQG---LCLWVPVV---SEPFAMVTLAARNIAVNPGSKFSVLPSSHIRVATSTLNDRCEE 430
Cdd:COG0436 316 PEGafyLFADVPELgldSEEFAERLLEEAGVAVVPGSAFGPAGEGYVRISYATSEERLEE 375
|
|
| Aminotran_1_2 |
pfam00155 |
Aminotransferase class I and II; |
101-426 |
1.50e-22 |
|
Aminotransferase class I and II;
Pssm-ID: 395103 [Multi-domain] Cd Length: 351 Bit Score: 98.15 E-value: 1.50e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 101 AGVLDLTLAGPDAALLPRLAEAMAYGASVDDLNSYERSRIVPELKDAVSERW------PYEAEAFLATNGGYNAV-YTIL 173
Cdd:pfam00155 1 TDKINLGSNEYLGDTLPAVAKAEKDALAGGTRNLYGPTDGHPELREALAKFLgrspvlKLDREAAVVFGSGAGANiEALI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 174 HALVSPGSSVAIEHPTAMRLLDILEDLGVKIIPVAC---DDDGPLPASLSEALRQRPAaFLFQPRLHSVTGVTVSSSRLD 250
Cdd:pfam00155 81 FLLANPGDAILVPAPTYASYIRIARLAGGEVVRYPLydsNDFHLDFDALEAALKEKPK-VVLHTSPHNPTGTVATLEELE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 251 QLGDVLEDSDTLIIED----DGVGDVSTAAPQSLggrFAERTIHIL---SLSKSLG-PDLRLAVLSSSAPIVDQIQSYRS 322
Cdd:pfam00155 160 KLLDLAKEHNILLLVDeayaGFVFGSPDAVATRA---LLAEGPNLLvvgSFSKAFGlAGWRVGYILGNAAVISQLRKLAR 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 323 FsaGWTSRILQGAAAWLLRDPATWQLIGEA-REIYQQRRDALADALSERGIPIPAGQ-GLCLWV---PVVSEPFAMVTLA 397
Cdd:pfam00155 237 P--FYSSTHLQAAAAAALSDPLLVASELEEmRQRIKERRDYLRDGLQAAGLSVLPSQaGFFLLTgldPETAKELAQVLLE 314
|
330 340
....*....|....*....|....*....
gi 1582227625 398 ARNIAVNPGSKFSVlpSSHIRVATSTLND 426
Cdd:pfam00155 315 EVGVYVTPGSSPGV--PGWLRITVAGGTE 341
|
|
| PRK05764 |
PRK05764 |
aspartate aminotransferase; Provisional |
142-423 |
4.80e-16 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 235596 Cd Length: 393 Bit Score: 79.40 E-value: 4.80e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 142 PELKDAVSERW------PYEAEAFLATNGGYNAVYTILHALVSPGSSVAIEHP--TAMRllDILEDLGVKIIPVACD-DD 212
Cdd:PRK05764 71 PELREAIAAKLkrdnglDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPywVSYP--EMVKLAGGVPVFVPTGeEN 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 213 G--PLPASLSEALRQRPAAFLF----QPrlhsvTGVTVSSSRLDQLGDVLEDSDTLIIED--------DGVGDVSTAapq 278
Cdd:PRK05764 149 GfkLTVEQLEAAITPKTKALILnspsNP-----TGAVYSPEELEAIADVAVEHDIWVLSDeiyeklvyDGAEFTSIA--- 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 279 SLGGRFAERTIHILSLSKSL---GpdLRLAVLSSSAPIVDQIQSYRSFSAGWTSRILQGAAAWLLRDPatWQLIGEAREI 355
Cdd:PRK05764 221 SLSPELRDRTITVNGFSKAYamtG--WRLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNGP--QDEVEEMRQA 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 356 YQQRRDALADALSE-RGIPIPAGQG----------LCLWVPVVSEPFAMVTLAARNIAVNPGSKFSvlPSSHIRV--ATS 422
Cdd:PRK05764 297 FEERRDLMVDGLNEiPGLECPKPEGafyvfpnvskLLGKSITDSLEFAEALLEEAGVAVVPGIAFG--APGYVRLsyATS 374
|
.
gi 1582227625 423 T 423
Cdd:PRK05764 375 L 375
|
|
| HisC |
COG0079 |
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid ... |
117-430 |
5.34e-14 |
|
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid transport and metabolism]; Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 439849 [Multi-domain] Cd Length: 341 Bit Score: 72.86 E-value: 5.34e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 117 PRLAEAMAygASVDDLNSY-ERSriVPELKDAVSERWPYEAEAFLATNGGYNAVYTILHALVSPGSSVAI------EHPT 189
Cdd:COG0079 29 PKVLEAIA--AALDALNRYpDPD--ATALREALAEYYGVPPEQVLVGNGSDELIQLLARAFLGPGDEVLVpeptfsEYPI 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 190 AMRLldiledLGVKIIPVACDDDGPL-PASLSEALRQRP-AAFLFQPrlHSVTGVTVSSSRLDQLGDVLEDsDTLIIED- 266
Cdd:COG0079 105 AARA------AGAEVVEVPLDEDFSLdLDALLAAITERTdLVFLCNP--NNPTGTLLPREELEALLEALPA-DGLVVVDe 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 267 ---DGVGDVSTAAPqsLGGRFaERTIHILSLSKSLG-PDLRLAVLSSSAPIVDQIQSYR-SFSagwTSRILQGAAAWLLR 341
Cdd:COG0079 176 ayaEFVPEEDSALP--LLARY-PNLVVLRTFSKAYGlAGLRLGYAIASPELIAALRRVRgPWN---VNSLAQAAALAALE 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 342 DPAtWQLigEAREIYQQRRDALADALSERGIPIPAGQGLCLWVPVVSEPFAMVT-LAARNIAVNPGSKFSvLPsSHIRVA 420
Cdd:COG0079 250 DRA-YLE--ETRARLRAERERLAAALRALGLTVYPSQANFVLVRVPEDAAELFEaLLERGILVRDFSSFG-LP-DYLRIT 324
|
330
....*....|..
gi 1582227625 421 --TSTLNDRCEE 430
Cdd:COG0079 325 vgTPEENDRLLA 336
|
|
| YhcF |
COG1725 |
DNA-binding transcriptional regulator YhcF, GntR family [Transcription]; |
28-132 |
1.57e-12 |
|
DNA-binding transcriptional regulator YhcF, GntR family [Transcription];
Pssm-ID: 441331 [Multi-domain] Cd Length: 114 Bit Score: 63.66 E-value: 1.57e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 28 ALIRAGVLPIGTRLPAIRDIAYELHVSPATISEAWSELRRQKIISGRGRNGTwvsgdrFVAKPERLASSGNYRAGVLDlt 107
Cdd:COG1725 21 EAIASGELKPGDRLPSVRELAAELGVNPNTVAKAYRELEDEGLIETRRGKGT------FVAEDARELLEERREEFLEE-- 92
|
90 100
....*....|....*....|....*
gi 1582227625 108 lagpdaALLPRLAEAMAYGASVDDL 132
Cdd:COG1725 93 ------ALRELVAEARRLGLSLEEL 111
|
|
| PRK07683 |
PRK07683 |
aminotransferase A; Validated |
100-429 |
5.90e-11 |
|
aminotransferase A; Validated
Pssm-ID: 236075 Cd Length: 387 Bit Score: 63.97 E-value: 5.90e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 100 RAGVLDLTLAGPDAALlPRLAEAMAYGASVDDLNSYERSRIVPELKDAVS----ERW--PYEAEA-FLATNGGYNAVYTI 172
Cdd:PRK07683 27 YDNLISLTIGQPDFPT-PSHVKEAAKRAITENYTSYTHNAGLLELRKAACnfvkDKYdlHYSPESeIIVTIGASEAIDIA 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 173 LHALVSPGSSVAIEHPTAMRLLDILEDLGVKiiPVACD---DDGPLPASLSEALRQRPAAFLFQPRLHSVTGVTVSSSRL 249
Cdd:PRK07683 106 FRTILEPGTEVILPAPIYPGYEPIIRLCGAK--PVFIDtrsTGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEEL 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 250 DQLGDVLEDSDTLIIEDDGVGDVSTAAPQ-SLGG--RFAERTIHILSLSKSLG-PDLRLAVLSSSAPIVDQIQSYRSFSA 325
Cdd:PRK07683 184 QDIADVLKDKNIFVLSDEIYSELVYEQPHtSIAHfpEMREKTIVINGLSKSHSmTGWRIGFLFAPSYLAKHILKVHQYNV 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 326 GWTSRILQGAAAWLL---RDPAtwQLIgeaREIYQQRRDALADALSERGIPIPAGQGLCLWVPVV------SEPFAMVTL 396
Cdd:PRK07683 264 TCASSISQYAALEALtagKDDA--KMM---RHQYKKRRDYVYNRLISMGLDVEKPTGAFYLFPSIghftmsSFDFALDLV 338
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1582227625 397 AARNIAVNPGSKFSVLPSSHIRV--ATS--TLN---DRCE 429
Cdd:PRK07683 339 EEAGLAVVPGSAFSEYGEGYVRLsyAYSieTLKeglDRLE 378
|
|
| WHTH_GntR |
cd07377 |
Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional ... |
28-82 |
1.81e-10 |
|
Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; This CD represents the winged HTH DNA-binding domain of the GntR (named after the gluconate operon repressor in Bacillus subtilis) family of bacterial transcriptional regulators and their putative homologs found in eukaryota and archaea. The GntR family has over 6000 members distributed among almost all bacterial species, which is comprised of FadR, HutC, MocR, YtrA, AraR, PlmA, and other subfamilies for the regulation of the most varied biological process. The monomeric proteins of the GntR family are characterized by two function domains: a small highly conserved winged helix-turn-helix prokaryotic DNA binding domain in the N-terminus, and a very diverse regulatory ligand-binding domain in the C-terminus for effector-binding/oligomerization, which provides the basis for the subfamily classifications. Binding of the effector to GntR-like transcriptional regulators is presumed to result in a conformational change that regulates the DNA-binding affinity of the repressor. The GntR-like proteins bind as dimers, where each monomer recognizes a half-site of 2-fold symmetric DNA sequences.
Pssm-ID: 153418 [Multi-domain] Cd Length: 66 Bit Score: 56.30 E-value: 1.81e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 1582227625 28 ALIRAGVLPIGTRLPAIRDIAYELHVSPATISEAWSELRRQKIISGRGRNGTWVS 82
Cdd:cd07377 12 EAILSGELKPGDRLPSERELAEELGVSRTTVREALRELEAEGLVERRPGRGTFVA 66
|
|
| PRK07568 |
PRK07568 |
pyridoxal phosphate-dependent aminotransferase; |
135-369 |
2.72e-10 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 181036 Cd Length: 397 Bit Score: 61.79 E-value: 2.72e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 135 YERSRIVPELKDAVS---ERW--PYEAEAFLATNGGYNAVYTILHALVSPGSSVAIEHPTAMRLLDILEDLGVKIIPVAC 209
Cdd:PRK07568 62 YSHSQGIPELREAFAkyyKKWgiDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTT 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 210 D-DDG---PLPASLSEALRQRPAAFLF----QPrlhsvTGVTVSSSRLDQLGDVLEDSDTLIIED--------DGVGDVS 273
Cdd:PRK07568 142 KiEEGfhlPSKEEIEKLITPKTKAILIsnpgNP-----TGVVYTKEELEMLAEIAKKHDLFLISDevyrefvyDGLKYTS 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 274 TAapqSLGGrFAERTIHILSLSK-------------SLGPDLRLAVLSS-----SAPIVDQIqsyrsfsagwtsrilqgA 335
Cdd:PRK07568 217 AL---SLEG-LEDRVIIIDSVSKrysacgarigcliSKNKELIAAAMKLcqarlSPPTLEQI-----------------G 275
|
250 260 270
....*....|....*....|....*....|....
gi 1582227625 336 AAWLLRDPATWqlIGEAREIYQQRRDALADALSE 369
Cdd:PRK07568 276 AAALLDTPESY--FDEVREEYKKRRDILYEELNK 307
|
|
| PRK07550 |
PRK07550 |
aminotransferase; |
104-371 |
2.33e-09 |
|
aminotransferase;
Pssm-ID: 181026 [Multi-domain] Cd Length: 386 Bit Score: 58.82 E-value: 2.33e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 104 LDLTLAGPDAALLPRLAEAMAYGASVDDLNSYERSRIVPELKDAVSERW------PYEAEAFLATNGGYNAVYTILHALV 177
Cdd:PRK07550 32 IDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYsrlygaAISPEQVHITSGCNQAFWAAMVTLA 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 178 SPGSSVAI------EHPTAmrlldiLEDLGVKIIPVACDDDG---PLPASLSEALRQRPAAF-LFQPrlHSVTGVTVSSS 247
Cdd:PRK07550 112 GAGDEVILplpwyfNHKMW------LDMLGIRPVYLPCDEGPgllPDPAAAEALITPRTRAIaLVTP--NNPTGVVYPPE 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 248 RLDQLGDVLEDSDTLIIEDDGVGDVST--AAPQSLggrFA-----ERTIHILSLSKSLG-PDLRLAVLSSSAPIVDQIQS 319
Cdd:PRK07550 184 LLHELYDLARRHGIALILDETYRDFDSggGAPHDL---FAdpdwdDTLVHLYSFSKSYAlTGHRVGAVVASPARIAEIEK 260
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1582227625 320 YRSFSAGWTSRILQGAAAWLLRDPATWqLIGEAREIyQQRRDALADALSERG 371
Cdd:PRK07550 261 FMDTVAICAPRIGQIAVAWGLPNLADW-RAGNRAEI-ARRRDAFRAVFARLP 310
|
|
| HTH_GNTR |
smart00345 |
helix_turn_helix gluconate operon transcriptional repressor; |
22-81 |
2.43e-09 |
|
helix_turn_helix gluconate operon transcriptional repressor;
Pssm-ID: 197669 [Multi-domain] Cd Length: 60 Bit Score: 52.96 E-value: 2.43e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 22 IALETSALIRAGVLPIGTRLPAIRDIAYELHVSPATISEAWSELRRQKIISGRGRNGTWV 81
Cdd:smart00345 1 VAERLREDIVSGELRPGDKLPSERELAAQLGVSRTTVREALSRLEAEGLVQRRPGSGTFV 60
|
|
| PRK08361 |
PRK08361 |
aspartate aminotransferase; Provisional |
141-423 |
1.26e-08 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 236248 [Multi-domain] Cd Length: 391 Bit Score: 56.42 E-value: 1.26e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 141 VPELKDAVSERWP------YEAEAFLATNGGYNAVYTILHALVSPGSSVAIEHPTAMRLLDILEDLGVKIIPVACDDDG- 213
Cdd:PRK08361 72 IPELREAIAEYYKkfygvdVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENe 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 214 --PLPASLSEALRQRPAAFLFQ-PrlHSVTGVTVSSSRLDQLGDVLEDSDTLIIEDDG----VGDVSTAAPQSlggRFA- 285
Cdd:PRK08361 152 fqPDPDELLELITKRTRMIVINyP--NNPTGATLDKEVAKAIADIAEDYNIYILSDEPyehfLYEGAKHYPMI---KYAp 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 286 ERTIHILSLSKSLG-PDLRLAVLSSSAPIVDQIQSYRSFSAGWTSRILQGAAAWLLRDPATWQLIGEAREIYQQRRDALA 364
Cdd:PRK08361 227 DNTILANSFSKTFAmTGWRLGFVIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVL 306
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1582227625 365 DALSER-GIPI--PAGqGLCLWVPV-----VSEPFAMVTLAARNIAVNPGSKFSVLPSSHIRVATST 423
Cdd:PRK08361 307 KRLKEMpHIKVfePKG-AFYVFANIdetgmSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT 372
|
|
| PRK06225 |
PRK06225 |
pyridoxal phosphate-dependent aminotransferase; |
117-422 |
1.56e-08 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235749 [Multi-domain] Cd Length: 380 Bit Score: 56.30 E-value: 1.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 117 PRLAEAMAYGASVDDLNSYERSRIVPELKDAVSERWPYEAEAFLATNGGYNAVYTILHALVSPGSSVAIEHPT------- 189
Cdd:PRK06225 44 EEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGyliidnf 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 190 AMRlldilEDLGVKIIPV---ACDDDgPLPASLSEALRQRPA-AFLFQPrlHSVTGVTVSSSRLDQLGDVLEDSDTLIIE 265
Cdd:PRK06225 124 ASR-----FGAEVIEVPIyseECNYK-LTPELVKENMDENTRlIYLIDP--LNPLGSSYTEEEIKEFAEIARDNDAFLLH 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 266 DDGVGDVstAAPQSLGGRFA-ERTIHILSLSKSLG-PDLRLAVLSSSAPIVDQIQSYRSFSAGwTSRILQGAAAWLLRDP 343
Cdd:PRK06225 196 DCTYRDF--AREHTLAAEYApEHTVTSYSFSKIFGmAGLRIGAVVATPDLIEVVKSIVINDLG-TNVIAQEAAIAGLKVK 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 344 ATWqlIGEAREIYQQRRDALADALSER---GIPIPAGQGLCLWVPVVS---EPFAMVT-LAARNIAVNPGSKFS-VLPSS 415
Cdd:PRK06225 273 DEW--IDRIRRTTFKNQKLIKEAVDEIegvFLPVYPSHGNMMVIDISEagiDPEDLVEyLLERKIFVRQGTYTSkRFGDR 350
|
....*..
gi 1582227625 416 HIRVATS 422
Cdd:PRK06225 351 YIRVSFS 357
|
|
| PRK07366 |
PRK07366 |
LL-diaminopimelate aminotransferase; |
227-409 |
3.40e-08 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 180947 Cd Length: 388 Bit Score: 55.07 E-value: 3.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 227 PAAFLFQPRL------HSVTGVTVSSSRLDQLGDVLEDSDTLIIED----DGVGDVSTAAPQSL-GGRFAERTIHILSLS 295
Cdd:PRK07366 159 PTEVLAQARLmvlsypHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDfpyvDLVFDGEVEPPSILqADPEKSVSIEFFTLS 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 296 KS--LGpDLRLAVLSSSAPIVD---QIQSYRSFS--AGwtsrILQGAAAWLLRDPATWQligEAREIYQQRRDALADALS 368
Cdd:PRK07366 239 KSynMG-GFRIGFAIGNAQLIQalrQVKAVVDFNqyRG----ILNGAIAALTGPQATVQ---QTVQIFRQRRDAFINALH 310
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1582227625 369 ERGIPIPAGQG-LCLWVPVV------SEPFAMVTLAARNIAVNPGSKF 409
Cdd:PRK07366 311 QIGWPVPLPEAtMYVWAKLPepwqgnSVEFCTQLVAQTGVAASPGSGF 358
|
|
| PRK07309 |
PRK07309 |
pyridoxal phosphate-dependent aminotransferase; |
102-377 |
6.87e-08 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235985 Cd Length: 391 Bit Score: 54.34 E-value: 6.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 102 GVLDLTLAGPDAALLPRLAEAmAYGASVDDLNSYERSRIVPELKDAVSE------RWPYEAE-AFLATNGGYNAVYTILH 174
Cdd:PRK07309 31 GILKLTLGEPDFTTPDHVKEA-AKRAIDANQSHYTGMAGLLELRQAAADfvkekyNLDYAPEnEILVTIGATEALSASLT 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 175 ALVSPGSSVAIEHPTAMRLLDILEDLGVKIIPV-ACDDDGPL-PASLSEALRQRP----AAFLFQPRlhSVTGVTVSSSR 248
Cdd:PRK07309 110 AILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIdTTENDFVLtPEMLEKAILEQGdklkAVILNYPA--NPTGVTYSREQ 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 249 LDQLGDVLEDSDTLIIEDDGVGDVSTAAPQ--SLGGRFAERTIHILSLSKSLG-PDLRLAVLSSSAPIVDQIQSYRSFSA 325
Cdd:PRK07309 188 IKALADVLKKYDIFVISDEVYSELTYTGEPhvSIAEYLPDQTILINGLSKSHAmTGWRIGLIFAPAEFTAQLIKSHQYLV 267
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1582227625 326 GWTSRILQGAAAWLLRDPATWQLIgeAREIYQQRRDALADALSERGIPI--PAG 377
Cdd:PRK07309 268 TAATTMAQFAAVEALTNGKDDALP--MKKEYIKRRDYIIEKMTDLGFKIikPDG 319
|
|
| GntR |
pfam00392 |
Bacterial regulatory proteins, gntR family; This family of regulatory proteins consists of the ... |
20-81 |
2.12e-07 |
|
Bacterial regulatory proteins, gntR family; This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerization domain. The GntR-like proteins include the following sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA, DevA, DasR. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. The DasR regulator has been shown to be a global regulator of primary metabolism and development in Streptomyces coelicolor.
Pssm-ID: 306822 [Multi-domain] Cd Length: 64 Bit Score: 47.61 E-value: 2.12e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1582227625 20 RGIALETSALIRAGVLPIGTRLPAIRDIAYELHVSPATISEAWSELRRQKIISGRGRNGTWV 81
Cdd:pfam00392 3 EQVYARLREDILSGRLRPGDKLPSERELAAEFGVSRTTVREALRRLEAEGLVERRQGRGTFV 64
|
|
| PRK07324 |
PRK07324 |
transaminase; Validated |
142-419 |
2.31e-07 |
|
transaminase; Validated
Pssm-ID: 235989 Cd Length: 373 Bit Score: 52.63 E-value: 2.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 142 PELKDAVSERwpYE---AEAFLATNGGYNAVYTILHALVSPGSSVAIEHPTAMRLLDILEDLG--VKIIPVAcDDDGPLP 216
Cdd:PRK07324 65 PEFKEAVASL--YQnvkPENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYDIPESLGaeVDYWQLK-EENGWLP 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 217 aSLSEaLRQ--RPAAFLF------QPrlhsvTGVTVSSSRLDQLGDVLEDSDTLIIED------DGVGDVSTAAPqslgg 282
Cdd:PRK07324 142 -DLDE-LRRlvRPNTKLIcinnanNP-----TGALMDRAYLEEIVEIARSVDAYVLSDevyrplDEDGSTPSIAD----- 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 283 rFAERTIHILSLSK--SLgPDLRLAVLSSSAPIVDQIQSYRSF---SAG-----WTSRILQGAAAWLLRDPAtwqLIGEA 352
Cdd:PRK07324 210 -LYEKGISTNSMSKtySL-PGIRVGWIAANEEVIDILRKYRDYtmiCAGvfddmLASLALEHRDAILERNRK---IVRTN 284
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1582227625 353 REIYQQ--RRDALADALSERGIPIPAgqgLCLWVPVVSEPFAMVTLAARNIAVNPGSKFSVlpSSHIRV 419
Cdd:PRK07324 285 LAILDEwvAKEPRVSYVKPKAVSTSF---VKLDVDMPSEDFCLKLLKETGVLLVPGNRFDL--EGHVRI 348
|
|
| PRK06107 |
PRK06107 |
aspartate transaminase; |
100-373 |
3.70e-07 |
|
aspartate transaminase;
Pssm-ID: 180403 Cd Length: 402 Bit Score: 52.04 E-value: 3.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 100 RAG--VLDLTLAGPDAALLPRLAEAmAYGASVDDLNSYERSRIVPELKDAVSERW------PYEAEAFLATNGGYNAVYT 171
Cdd:PRK06107 30 AAGrsIVDLTVGEPDFDTPDHIKQA-AVAAIERGETKYTLVNGTPALRKAIIAKLerrnglHYADNEITVGGGAKQAIFL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 172 ILHALVSPGSSVAIEHPTAMRLLDILEDLGVKIIPVAC-DDDGPL--PASLSEALRQRpAAFLFQPRLHSVTGVTVSSSR 248
Cdd:PRK06107 109 ALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACpEEQGFKltPEALEAAITPR-TRWLILNAPSNPTGAVYSRAE 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 249 LDQLGDVLEDS-DTLIIEDD-------GVGDVST---AAPQslggrFAERTIHILSLSKSLG-PDLRLAVLSSSAPIVDQ 316
Cdd:PRK06107 188 LRALADVLLRHpHVLVLTDDiydhirfDDEPTPHllaAAPE-----LRDRVLVTNGVSKTYAmTGWRIGYAAGPADLIAA 262
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1582227625 317 IQSYRSFSAGWTSRILQGAAAWLLRdpATWQLIGEAREIYQQRRDALADALSerGIP 373
Cdd:PRK06107 263 INKLQSQSSSCPSSISQAAAAAALN--GDQSFVTESVAVYKQRRDYALALLN--AIP 315
|
|
| PLN00175 |
PLN00175 |
aminotransferase family protein; Provisional |
117-393 |
7.38e-07 |
|
aminotransferase family protein; Provisional
Pssm-ID: 215089 [Multi-domain] Cd Length: 413 Bit Score: 51.02 E-value: 7.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 117 PRLAEAMAYGASVDDLNSYERSRIVPELKDAVSERWPYEA-------EAFLATNGGYNAVYTILHALVSPGSSVAIEHPT 189
Cdd:PLN00175 69 PDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTglvvdpeKEVTVTSGCTEAIAATILGLINPGDEVILFAPF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 190 AMRLLDILEDLGVKIIPVA-CDDDGPLPA-SLSEALRQRPAAFLFQ-PrlHSVTGVTVSSSRLDQLGDVLEDSDTLIIED 266
Cdd:PLN00175 149 YDSYEATLSMAGAKIKTVTlRPPDFAVPEdELKAAFTSKTRAILINtP--HNPTGKMFTREELELIASLCKENDVLAFTD 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 267 DgVGD--------VSTAapqSLGGRFaERTIHILSLSKSL---GPDLRLAVlsssAPI-----VDQIQSYRSFSagwTSR 330
Cdd:PLN00175 227 E-VYDklafegdhISMA---SLPGMY-ERTVTMNSLGKTFsltGWKIGWAI----APPhltwgVRQAHSFLTFA---TAT 294
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1582227625 331 ILQGAAAWLLRDPATWqlIGEAREIYQQRRDALADALSERGIPIPAGQGlCLWVPVVSEPFAM 393
Cdd:PLN00175 295 PMQWAAVAALRAPESY--YEELKRDYSAKKDILVEGLKEVGFKVYPSSG-TYFVMVDHTPFGF 354
|
|
| PRK07682 |
PRK07682 |
aminotransferase; |
160-430 |
2.48e-06 |
|
aminotransferase;
Pssm-ID: 181082 [Multi-domain] Cd Length: 378 Bit Score: 49.35 E-value: 2.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 160 LATNGGYNAVYTILHALVSPGSSVAIEHPTAMRLLDILEDLGVKIIPVAC--DDDGPL-PASLSEALRQRPAAFLF-QPr 235
Cdd:PRK07682 85 IVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATtlENEFKVqPAQIEAAITAKTKAILLcSP- 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 236 lHSVTGVTVSSSRLDQLGDVLEDSDTLIIEDDGVGD-------VSTAAPQSLggrfAERTIHILSLSKS-------LG-- 299
Cdd:PRK07682 164 -NNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAEltydeayTSFASIKGM----RERTILISGFSKGfamtgwrLGfi 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 300 ---PDLRLAVLsssapivdQIQSYRSFSAgwtSRILQGAAAWLLRDPAtwQLIGEAREIYQQRRDALADALSERGIPIPA 376
Cdd:PRK07682 239 aapVYFSEAML--------KIHQYSMMCA---PTMAQFAALEALRAGN--DDVIRMRDSYRKRRNFFVTSFNEIGLTCHV 305
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 377 GQGLCLWVPVV------SEPFAMVTLAARNIAVNPGSKFSVLPSSHIRVATSTLNDRCEE 430
Cdd:PRK07682 306 PGGAFYAFPSIsstglsSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQE 365
|
|
| PRK05942 |
PRK05942 |
aspartate aminotransferase; Provisional |
330-430 |
2.51e-06 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 180317 Cd Length: 394 Bit Score: 49.33 E-value: 2.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 330 RILQGAAAWLLRDPATWqlIGEAREIYQQRRDALADALSERGIPIPAGQG-LCLWVPVV----SEPFAMVTLAARNIAVN 404
Cdd:PRK05942 278 SALQKAAETALQLPDSY--LQQVQERYRTRRDFLIQGLGELGWNIPPTKAtMYLWVPCPvgmgSTDFALNVLQKTGVVVT 355
|
90 100
....*....|....*....|....*.
gi 1582227625 405 PGSKFSVLPSSHIRVATSTLNDRCEE 430
Cdd:PRK05942 356 PGNAFGEGGEGYVRISLIADCDRLGE 381
|
|
| PRK07681 |
PRK07681 |
LL-diaminopimelate aminotransferase; |
286-420 |
3.43e-06 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 181081 Cd Length: 399 Bit Score: 49.03 E-value: 3.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 286 ERTIHILSLSKSLG-PDLRLAVLSSSAPIVD---QIQSYRSFSAGWTsriLQGAAAWLLRDPATWqlIGEAREIYQQRRD 361
Cdd:PRK07681 229 EVGVEINSLSKSYSlAGSRIGYMIGNEEIVRaltQFKSNTDYGVFLP---IQKAACAALRNGAAF--CEKNRGIYQERRD 303
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1582227625 362 ALADALSERG--IPIPAGqGLCLW--VPV--VSEPFAMVTLAARNIAVNPGSKFSVLPSSHIRVA 420
Cdd:PRK07681 304 TLVDGFRTFGwnVDKPAG-SMFVWaeIPKgwTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIA 367
|
|
| PRK09276 |
PRK09276 |
LL-diaminopimelate aminotransferase; Provisional |
333-430 |
7.57e-06 |
|
LL-diaminopimelate aminotransferase; Provisional
Pssm-ID: 181749 Cd Length: 385 Bit Score: 47.98 E-value: 7.57e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 333 QGAAAWLLRDPAtwQLIGEAREIYQQRRDALADALSERGIPIPAGQG-LCLWVPV----VSEPFAMVTLAARNIAVNPGS 407
Cdd:PRK09276 277 QEAGIAALNGPQ--EVVEELRKIYQERRDILVEGLRKLGLEVEPPKAtFYVWAPVpkgyTSAEFATLLLDKAGVVVTPGN 354
|
90 100
....*....|....*....|...
gi 1582227625 408 KFSVLPSSHIRVATSTLNDRCEE 430
Cdd:PRK09276 355 GFGEYGEGYFRIALTVPDERIEE 377
|
|
| PRK08068 |
PRK08068 |
transaminase; Reviewed |
331-430 |
8.11e-06 |
|
transaminase; Reviewed
Pssm-ID: 181219 Cd Length: 389 Bit Score: 47.61 E-value: 8.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 331 ILQGAAAWLLRDPATwqlIGEAREIYQQRRDALADALSERG--IPIPAGQgLCLWVPV----VSEPFAMVTLAARNIAVN 404
Cdd:PRK08068 277 IQDAAIEALLSDQSC---VAELVARYESRRNAFISACREIGweVDAPKGS-FFAWMPVpkgyTSEQFADLLLEKAHVAVA 352
|
90 100
....*....|....*....|....*.
gi 1582227625 405 PGSKFSVLPSSHIRVATSTLNDRCEE 430
Cdd:PRK08068 353 PGNGFGEHGEGYVRVGLLTDEERLRE 378
|
|
| PRK06836 |
PRK06836 |
pyridoxal phosphate-dependent aminotransferase; |
103-379 |
2.87e-05 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180720 Cd Length: 394 Bit Score: 45.95 E-value: 2.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 103 VLDLTLAGPDAALLPRLAEAMA--YGASVDDLNSYERSRIVPELKDAVSERW------PYEAEAFLATNGGYNAVYTILH 174
Cdd:PRK06836 35 VFDFSLGNPSVPPPAAVKEALRelAEEEDPGLHGYMPNAGYPEVREAIAESLnrrfgtPLTADHIVMTCGAAGALNVALK 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 175 ALVSPGSSVAIEHPTAMRLLDILEDLGVKIIPVACDDDG--PLPASLSEALRQRPAAFLFQ-PrlHSVTGVTVSSSRLDQ 251
Cdd:PRK06836 115 AILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTfqPDLDALEAAITPKTKAVIINsP--NNPTGVVYSEETLKA 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 252 LGDVLED------SDTLIIED--------DGVgdvstAAPQSLggRFAERTIHILSLSKSLG-PDLRL--AVLSSSAPIV 314
Cdd:PRK06836 193 LAALLEEkskeygRPIYLISDepyreivyDGA-----EVPYIF--KYYDNSIVVYSFSKSLSlPGERIgyIAVNPEMEDA 265
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1582227625 315 DQIQSyrsfSAGWTSRILQGAAAwllrdPATWQ-----LIGEA--REIYQQRRDALADALSERGIPIPAGQG 379
Cdd:PRK06836 266 DDLVA----ALVFANRILGFVNA-----PALMQrvvakCLDATvdVSIYKRNRDLLYDGLTELGFECVKPQG 328
|
|
| PRK08175 |
PRK08175 |
aminotransferase; Validated |
103-420 |
3.62e-05 |
|
aminotransferase; Validated
Pssm-ID: 181268 [Multi-domain] Cd Length: 395 Bit Score: 45.86 E-value: 3.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 103 VLDLTLAGPDAALLPRLAEAMAYGASVDDLNSYERSRIVPELKDAVSeRWpY----------EAEAfLATNGGYNAVYTI 172
Cdd:PRK08175 31 IIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAIS-RW-YqdrydvdidpESEA-IVTIGSKEGLAHL 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 173 LHALVSPGSSVAIE------HPTAMrlldILEDLGVKIIPVAcdDDGPLPASLSEALRQ---RPAA----FLFQPrlhsv 239
Cdd:PRK08175 108 MLATLDHGDTVLVPnpsypiHIYGA----VIAGAQVRSVPLV--EGVDFFNELERAIREsypKPKMmilgFPSNP----- 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 240 TGVTVSSSRLDQLGDVLEDSDTLIIEDDGVGDV---STAAP---QSLGGRfaERTIHILSLSKSLG-PDLRLAVLSSSAP 312
Cdd:PRK08175 177 TAQCVELEFFEKVVALAKRYDVLVVHDLAYADIvydGWKAPsimQVPGAK--DVAVEFFTLSKSYNmAGWRIGFMVGNPE 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 313 IVDQIQSYRSFSAGWTSRILQGAAAWLLRDPAtwQLIGEAREIYQQRRDALADALSERGIPIPAGQG-LCLWVPVV---- 387
Cdd:PRK08175 255 LVSALARIKSYHDYGTFTPLQVAAIAALEGDQ--QCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKAsMYVWAKIPepya 332
|
330 340 350
....*....|....*....|....*....|....*.
gi 1582227625 388 ---SEPFAMVTLAARNIAVNPGSKFSVLPSSHIRVA 420
Cdd:PRK08175 333 amgSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFA 368
|
|
| PRK12414 |
PRK12414 |
putative aminotransferase; Provisional |
111-369 |
4.04e-05 |
|
putative aminotransferase; Provisional
Pssm-ID: 183514 Cd Length: 384 Bit Score: 45.55 E-value: 4.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 111 PDAALLPRLAEAMAYGAsvddlNSYERSRIVPELKDAVSERWP------YEA-EAFLATNGGYNAVYTILHALVSPGSSV 183
Cdd:PRK12414 43 PDPALVEGVARAMRDGH-----NQYAPMAGIAALREALAEKTErlygarYDPaSEVTVIASASEGLYAAISALVHPGDEV 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 184 AIEHPTAMRLLDILEDLGVKiiPVACDDDgplPASLSEALRQRPAAFLFQPRL------HSVTGVTVSSSRLDQLGDVLE 257
Cdd:PRK12414 118 IYFEPSFDSYAPIVRLQGAT--PVAIKLS---PEDFRVNWDEVAAAITPRTRMiivntpHNPSATVFSAADLARLAQLTR 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 258 DSDTLIIED--------DGVGDVSTAAPQSLggrfAERTIHILSLSKSLG-PDLRLAVLSSSAPIVDQIQSYRSFSAGWT 328
Cdd:PRK12414 193 NTDIVILSDevyehvvfDGARHHSMARHREL----AERSVIVSSFGKSYHvTGWRVGYCLAPAELMDEIRKVHQFMVFSA 268
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1582227625 329 SRILQGAAAWLLRDPATWQLIGEareIYQQRRDALADALSE 369
Cdd:PRK12414 269 DTPMQHAFAEALAEPASYLGLGA---FYQRKRDLLARELAG 306
|
|
| MngR |
COG2188 |
DNA-binding transcriptional regulator, GntR family [Transcription]; |
28-119 |
7.78e-05 |
|
DNA-binding transcriptional regulator, GntR family [Transcription];
Pssm-ID: 441791 [Multi-domain] Cd Length: 238 Bit Score: 44.08 E-value: 7.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 28 ALIRAGVLPIGTRLPAIRDIAYELHVSPATISEAWSELRRQKIISGRGRNGTWVSGDRFVAKPERLAS------SGNYRA 101
Cdd:COG2188 16 ERIESGELPPGDRLPSERELAEEFGVSRMTVRKALDELVEEGLLERRQGRGTFVAEPKIEYPLSRLTSfteelrARGREP 95
|
90 100
....*....|....*....|
gi 1582227625 102 G--VLDLTLAGPDAALLPRL 119
Cdd:COG2188 96 StrVLSAERVPADEEVAEAL 115
|
|
| PRK09148 |
PRK09148 |
LL-diaminopimelate aminotransferase; |
332-420 |
2.14e-04 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 181674 [Multi-domain] Cd Length: 405 Bit Score: 43.51 E-value: 2.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 332 LQGAAAWLLRDPATwqLIGEAREIYQQRRDALADALSERGIPIPAGQG-LCLWVPvVSEPFA----------MVTLAarN 400
Cdd:PRK09148 275 IQVAATAALNGPQD--CIAEMRELYKKRRDVLVESFGRAGWDIPPPAAsMFAWAP-IPEAFRhlgslefsklLVEKA--D 349
|
90 100
....*....|....*....|
gi 1582227625 401 IAVNPGSKFSVLPSSHIRVA 420
Cdd:PRK09148 350 VAVAPGVGFGEHGDGYVRIA 369
|
|
| PLN02607 |
PLN02607 |
1-aminocyclopropane-1-carboxylate synthase |
201-384 |
8.79e-04 |
|
1-aminocyclopropane-1-carboxylate synthase
Pssm-ID: 215327 [Multi-domain] Cd Length: 447 Bit Score: 41.41 E-value: 8.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 201 GVKIIPVACDDDGPL---PASLsEALRQRPAAFLFQPRLHSVT------GVTVSSSRLDQLGDVLEDSDTLIIEDDGVGD 271
Cdd:PLN02607 166 GVKIVPIHCDSSNNFqvtPQAL-EAAYQEAEAANIRVRGVLITnpsnplGATVQRSVLEDILDFVVRKNIHLVSDEIYSG 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 272 VSTAAP---------QSLGGRFAERTIHIL-SLSKSLG-PDLRLAVL-SSSAPIVDQIQSYRSFSAgwTSRILQGAAAWL 339
Cdd:PLN02607 245 SVFSASefvsvaeivEARGYKGVAERVHIVySLSKDLGlPGFRVGTIySYNDKVVTTARRMSSFTL--VSSQTQHLLASM 322
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1582227625 340 LRDPA-TWQLIGEAREIYQQRRDALADALSERGIPIPAGQ-GLCLWV 384
Cdd:PLN02607 323 LSDEEfTENYIRTNRERLRKRYEMIVQGLRRAGIECLKGNaGLFCWM 369
|
|
| PRK10421 |
PRK10421 |
DNA-binding transcriptional repressor LldR; Provisional |
28-81 |
1.68e-03 |
|
DNA-binding transcriptional repressor LldR; Provisional
Pssm-ID: 236690 [Multi-domain] Cd Length: 253 Bit Score: 40.14 E-value: 1.68e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 1582227625 28 ALIRAGVLPIGTRLPAIRDIAYELHVSPATISEAWSELRRQKIISGRGRNGTWV 81
Cdd:PRK10421 13 ALIEEKNLEAGMKLPAERQLAMQLGVSRNSLREALAKLVSEGVLLSRRGGGTFI 66
|
|
| FadR |
COG2186 |
DNA-binding transcriptional regulator, FadR family [Transcription]; |
11-82 |
2.73e-03 |
|
DNA-binding transcriptional regulator, FadR family [Transcription];
Pssm-ID: 441789 [Multi-domain] Cd Length: 232 Bit Score: 39.15 E-value: 2.73e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1582227625 11 AEKIADRsIRgialetsALIRAGVLPIGTRLPAIRDIAYELHVSPATISEAWSELRRQKIISGRGRNGTWVS 82
Cdd:COG2186 9 AEQVAEQ-LR-------ELILSGELKPGDRLPSERELAEQLGVSRTTVREALRALEALGLVEVRQGGGTFVR 72
|
|
| PRK08960 |
PRK08960 |
pyridoxal phosphate-dependent aminotransferase; |
135-430 |
7.69e-03 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 181595 Cd Length: 387 Bit Score: 38.50 E-value: 7.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 135 YERSRIVPELKDAVSeRWpY--------EAEAFLATNGGYNAVYTILHALVSPGSSVAIE---HPTAMRLLDILEDlGVK 203
Cdd:PRK08960 65 YTAARGLPALREAIA-GF-YaqrygvdvDPERILVTPGGSGALLLASSLLVDPGKHWLLAdpgYPCNRHFLRLVEG-AAQ 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 204 IIPVACDDDGPLPASLSEAL--RQRPAAFLFQPRlhSVTGVTVSSSRLDQLGDVLEDSD-TLIIEDDGVGDV-STAAPQS 279
Cdd:PRK08960 142 LVPVGPDSRYQLTPALVERHwnADTVGALVASPA--NPTGTLLSRDELAALSQALRARGgHLVVDEIYHGLTyGVDAASV 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 280 LGgrFAERTIHILSLSKSLG-PDLRLAVL---SSSAPIVDQIQSYRSFSAgwtSRILQGAAAWLLRdPATWQLIGEAREI 355
Cdd:PRK08960 220 LE--VDDDAFVLNSFSKYFGmTGWRLGWLvapPAAVPELEKLAQNLYISA---STPAQHAALACFE-PETLAILEARRAE 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1582227625 356 YQQRRDALADALSERGIPIPA-GQG-LCLWVPVV-----SEPFAMVTLAARNIAVNPGSKF-SVLPSSHIRVATSTLNDR 427
Cdd:PRK08960 294 FARRRDFLLPALRELGFGIAVePQGaFYLYADISafggdAFAFCRHFLETEHVAFTPGLDFgRHQAGQHVRFAYTQSLPR 373
|
...
gi 1582227625 428 CEE 430
Cdd:PRK08960 374 LQE 376
|
|
| |
