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Conserved domains on  [gi|1107934721|emb|SGM06586|]
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Protein of uncharacterised function (DUF2563) [Mycobacterium tuberculosis]

Protein Classification

DUF2563 family protein( domain architecture ID 10566749)

DUF2563 family protein similar to Mycobacterium tuberculosis protein Rv2078

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2563 pfam10817
Protein of unknown function (DUF2563); This family of proteins with unknown function appears ...
 1-104 4.19e-51

Protein of unknown function (DUF2563); This family of proteins with unknown function appears to be restricted to Mycobacterium.


:

Pssm-ID: 287754  Cd Length: 104  Bit Score: 156.26  E-value: 4.19e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1107934721   1 MFVDVGLLHSGANESHYAGEHAHGGADQLSRGPLLSGMFGTFPVAQTFHDAVGAAHAQQMRNLHAHRQALITVGEKARHA 80
Cdd:pfam10817   1 MFVDTELLHSGGNESHRAGGHAHGGADQLARGPLLSGMFGDFAAADAFHDAVGAAHAQHVRNLQAHREALTTVGEKAHHA 80

                          90       100
                  ....*....|....*....|....
gi 1107934721  81 ATGFTDMDDGNAAELKAVVCSCAT 104
Cdd:pfam10817  81 ATGFTDMDDGNAAELKAVRCSCAT 104
 
Name Accession Description Interval E-value
DUF2563 pfam10817
Protein of unknown function (DUF2563); This family of proteins with unknown function appears ...
 1-104 4.19e-51

Protein of unknown function (DUF2563); This family of proteins with unknown function appears to be restricted to Mycobacterium.


Pssm-ID: 287754  Cd Length: 104  Bit Score: 156.26  E-value: 4.19e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1107934721   1 MFVDVGLLHSGANESHYAGEHAHGGADQLSRGPLLSGMFGTFPVAQTFHDAVGAAHAQQMRNLHAHRQALITVGEKARHA 80
Cdd:pfam10817   1 MFVDTELLHSGGNESHRAGGHAHGGADQLARGPLLSGMFGDFAAADAFHDAVGAAHAQHVRNLQAHREALTTVGEKAHHA 80

                          90       100
                  ....*....|....*....|....
gi 1107934721  81 ATGFTDMDDGNAAELKAVVCSCAT 104
Cdd:pfam10817  81 ATGFTDMDDGNAAELKAVRCSCAT 104
 
Name Accession Description Interval E-value
DUF2563 pfam10817
Protein of unknown function (DUF2563); This family of proteins with unknown function appears ...
 1-104 4.19e-51

Protein of unknown function (DUF2563); This family of proteins with unknown function appears to be restricted to Mycobacterium.


Pssm-ID: 287754  Cd Length: 104  Bit Score: 156.26  E-value: 4.19e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1107934721   1 MFVDVGLLHSGANESHYAGEHAHGGADQLSRGPLLSGMFGTFPVAQTFHDAVGAAHAQQMRNLHAHRQALITVGEKARHA 80
Cdd:pfam10817   1 MFVDTELLHSGGNESHRAGGHAHGGADQLARGPLLSGMFGDFAAADAFHDAVGAAHAQHVRNLQAHREALTTVGEKAHHA 80

                          90       100
                  ....*....|....*....|....
gi 1107934721  81 ATGFTDMDDGNAAELKAVVCSCAT 104
Cdd:pfam10817  81 ATGFTDMDDGNAAELKAVRCSCAT 104
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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