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Conserved domains on  [gi|1573952968|gb|RZE36911|]
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DUF397 domain-containing protein [Streptomyces albidoflavus]

Protein Classification

DUF397 domain-containing protein( domain architecture ID 10514297)

DUF397 domain-containing protein similar to Streptomyces coelicolor AbaA protein, which may be regulator of antibiotic production

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF397 pfam04149
Domain of unknown function (DUF397); The function of this family is unknown.
 17-72 2.82e-17

Domain of unknown function (DUF397); The function of this family is unknown.


:

Pssm-ID: 427747  Cd Length: 50  Bit Score: 67.92  E-value: 2.82e-17
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 1573952968 17 VRWRRSSRSTGMNNCVETARLTsgphagllAVRDSKNAPGPALLFSPAAWRGFVTA 72
Cdd:pfam04149  1 ATWRKSSYSGGGGNCVEVAADV--------AVRDSKDPDGPVLTFTPAEWAAFLAG 48
 
Name Accession Description Interval E-value
DUF397 pfam04149
Domain of unknown function (DUF397); The function of this family is unknown.
 17-72 2.82e-17

Domain of unknown function (DUF397); The function of this family is unknown.


Pssm-ID: 427747  Cd Length: 50  Bit Score: 67.92  E-value: 2.82e-17
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 1573952968 17 VRWRRSSRSTGMNNCVETARLTsgphagllAVRDSKNAPGPALLFSPAAWRGFVTA 72
Cdd:pfam04149  1 ATWRKSSYSGGGGNCVEVAADV--------AVRDSKDPDGPVLTFTPAEWAAFLAG 48
 
Name Accession Description Interval E-value
DUF397 pfam04149
Domain of unknown function (DUF397); The function of this family is unknown.
 17-72 2.82e-17

Domain of unknown function (DUF397); The function of this family is unknown.


Pssm-ID: 427747  Cd Length: 50  Bit Score: 67.92  E-value: 2.82e-17
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 1573952968 17 VRWRRSSRSTGMNNCVETARLTsgphagllAVRDSKNAPGPALLFSPAAWRGFVTA 72
Cdd:pfam04149  1 ATWRKSSYSGGGGNCVEVAADV--------AVRDSKDPDGPVLTFTPAEWAAFLAG 48
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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