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Conserved domains on  [gi|1564862654|gb|RXS02487|]
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cysteine synthase family protein [Staphylococcus saprophyticus]

Protein Classification

PLP-dependent cysteine synthase family protein( domain architecture ID 10000483)

cysteine synthase family protein is a pyridoxal 5'-phosphate (PLP)-dependent enzyme similar to Helicobacter pylori cysteine synthase

CATH:  3.40.50.1100
Gene Ontology:  GO:0030170
SCOP:  4000798

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CysK COG0031
Cysteine synthase [Amino acid transport and metabolism]; Cysteine synthase is part of the ...
3-291 1.32e-120

Cysteine synthase [Amino acid transport and metabolism]; Cysteine synthase is part of the Pathway/BioSystem: Cysteine biosynthesis


:

Pssm-ID: 439802 [Multi-domain]  Cd Length: 301  Bit Score: 347.81  E-value: 1.32e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   3 AFDLIGNTPLVLLESFS-NKDVQIYAKLEQYNPGGSVKDRLGKHLIETAIRENIIQKGDVVVEASAGNTGIGVAIAANHY 81
Cdd:COG0031     7 ILELIGNTPLVRLNRLSpGPGAEIYAKLESFNPGGSVKDRIALSMIEDAEKRGLLKPGGTIVEATSGNTGIGLAMVAAAK 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  82 GVSAVIFAPEGFSEEKISIIKALGAEVIRTDQTLGMAGAQKAARdyELQ---TGAYYLNQFESYRNPETYKSTIGKEITD 158
Cdd:COG0031    87 GYRLILVMPETMSKERRALLRAYGAEVVLTPGAEGMKGAIDKAE--ELAaetPGAFWPNQFENPANPEAHYETTGPEIWE 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 159 KLK-DIDYFVGGVGSGGTFAGVAEHL-AASYRTESVIVEPEGS-ILSGGNAHSHDIEGIGSEKWPSFLPRALVSDIIKVS 235
Cdd:COG0031   165 QTDgKVDAFVAGVGTGGTITGVGRYLkERNPDIKIVAVEPEGSpLLSGGEPGPHKIEGIGAGFVPKILDPSLIDEVITVS 244
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1564862654 236 DDAAFQNVKLLARQEGLLVGSSSGAALQGALEIKKHINKG-VIVTIFPDGSDRYMSK 291
Cdd:COG0031   245 DEEAFAMARRLAREEGILVGISSGAAVAAALRLAKRLGPGkTIVTILPDSGERYLST 301
 
Name Accession Description Interval E-value
CysK COG0031
Cysteine synthase [Amino acid transport and metabolism]; Cysteine synthase is part of the ...
3-291 1.32e-120

Cysteine synthase [Amino acid transport and metabolism]; Cysteine synthase is part of the Pathway/BioSystem: Cysteine biosynthesis


Pssm-ID: 439802 [Multi-domain]  Cd Length: 301  Bit Score: 347.81  E-value: 1.32e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   3 AFDLIGNTPLVLLESFS-NKDVQIYAKLEQYNPGGSVKDRLGKHLIETAIRENIIQKGDVVVEASAGNTGIGVAIAANHY 81
Cdd:COG0031     7 ILELIGNTPLVRLNRLSpGPGAEIYAKLESFNPGGSVKDRIALSMIEDAEKRGLLKPGGTIVEATSGNTGIGLAMVAAAK 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  82 GVSAVIFAPEGFSEEKISIIKALGAEVIRTDQTLGMAGAQKAARdyELQ---TGAYYLNQFESYRNPETYKSTIGKEITD 158
Cdd:COG0031    87 GYRLILVMPETMSKERRALLRAYGAEVVLTPGAEGMKGAIDKAE--ELAaetPGAFWPNQFENPANPEAHYETTGPEIWE 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 159 KLK-DIDYFVGGVGSGGTFAGVAEHL-AASYRTESVIVEPEGS-ILSGGNAHSHDIEGIGSEKWPSFLPRALVSDIIKVS 235
Cdd:COG0031   165 QTDgKVDAFVAGVGTGGTITGVGRYLkERNPDIKIVAVEPEGSpLLSGGEPGPHKIEGIGAGFVPKILDPSLIDEVITVS 244
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1564862654 236 DDAAFQNVKLLARQEGLLVGSSSGAALQGALEIKKHINKG-VIVTIFPDGSDRYMSK 291
Cdd:COG0031   245 DEEAFAMARRLAREEGILVGISSGAAVAAALRLAKRLGPGkTIVTILPDSGERYLST 301
CBS_like cd01561
CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS ...
8-290 1.24e-113

CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.


Pssm-ID: 107204 [Multi-domain]  Cd Length: 291  Bit Score: 329.86  E-value: 1.24e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   8 GNTPLVLLESFSN-KDVQIYAKLEQYNPGGSVKDRLGKHLIETAIRENIIQKGDVVVEASAGNTGIGVAIAANHYGVSAV 86
Cdd:cd01561     1 GNTPLVRLNRLSPgTGAEIYAKLEFFNPGGSVKDRIALYMIEDAEKRGLLKPGTTIIEPTSGNTGIGLAMVAAAKGYRFI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  87 IFAPEGFSEEKISIIKALGAEVIRTD--QTLGMAGAQKAARDYELQT-GAYYLNQFESYRNPETYKSTIGKEITDKLKD- 162
Cdd:cd01561    81 IVMPETMSEEKRKLLRALGAEVILTPeaEADGMKGAIAKARELAAETpNAFWLNQFENPANPEAHYETTAPEIWEQLDGk 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 163 IDYFVGGVGSGGTFAGVAEHL-AASYRTESVIVEPEGSIL-SGGNAHSHDIEGIGSEKWPSFLPRALVSDIIKVSDDAAF 240
Cdd:cd01561   161 VDAFVAGVGTGGTITGVARYLkEKNPNVRIVGVDPVGSVLfSGGPPGPHKIEGIGAGFIPENLDRSLIDEVVRVSDEEAF 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1564862654 241 QNVKLLARQEGLLVGSSSGAALQGALEIKKHINKG-VIVTIFPDGSDRYMS 290
Cdd:cd01561   241 AMARRLAREEGLLVGGSSGAAVAAALKLAKRLGPGkTIVTILPDSGERYLS 291
cysK TIGR01139
cysteine synthase A; This model distinguishes cysteine synthase A (CysK) from cysteine ...
5-290 1.99e-87

cysteine synthase A; This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate. [Amino acid biosynthesis, Serine family]


Pssm-ID: 273465  Cd Length: 298  Bit Score: 263.46  E-value: 1.99e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   5 DLIGNTPLVLLESFSNKDVQIYAKLEQYNPGGSVKDRLGKHLIETAIRENIIQKGDVVVEASAGNTGIGVAIAANHYGVS 84
Cdd:TIGR01139   3 ELIGNTPLVRLNRIEGCNANVFVKLEGRNPSGSVKDRIALNMIWDAEKRGLLKPGKTIVEPTSGNTGIALAMVAAARGYK 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  85 AVIFAPEGFSEEKISIIKALGAEVIRTDQTLGMAGAQKAARDYELQTGAYY--LNQFESYRNPETYKSTIGKEI-TDKLK 161
Cdd:TIGR01139  83 LILTMPETMSIERRKLLKAYGAELVLTPGAEGMKGAIAKAEEIAASTPNSYfmLQQFENPANPEIHRKTTGPEIwRDTDG 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 162 DIDYFVGGVGSGGTFAGVAEHLAASY-RTESVIVEPEGS-ILSGGNAHSHDIEGIGSEKWPSFLPRALVSDIIKVSDDAA 239
Cdd:TIGR01139 163 KLDAFVAGVGTGGTITGVGEVLKEQKpNIKIVAVEPAESpVLSGGKPGPHKIQGIGAGFIPKNLNRSVIDEVITVSDEEA 242
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1564862654 240 FQNVKLLARQEGLLVGSSSGAALQGALEIKKHINKG-VIVTIFPDGSDRYMS 290
Cdd:TIGR01139 243 IETARRLAAEEGILVGISSGAAVAAALKLAKRPEPDkLIVVILPSTGERYLS 294
PALP pfam00291
Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate ...
4-283 2.89e-69

Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4.


Pssm-ID: 459749 [Multi-domain]  Cd Length: 295  Bit Score: 216.79  E-value: 2.89e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   4 FDLIGNTPLVLLESFSNK-DVQIYAKLEQYNPGGSVKDRLGKHLIETAIREniiQKGDVVVEASAGNTGIGVAIAANHYG 82
Cdd:pfam00291   2 SLGIGPTPLVRLPRLSKElGVDVYLKLESLNPTGSFKDRGALNLLLRLKEG---EGGKTVVEASSGNHGRALAAAAARLG 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  83 VSAVIFAPEGFSEEKISIIKALGAEVIRTDQTLGMAgAQKAARDYELQTGAYYLNQFESYRNPETYKsTIGKEITDKL-K 161
Cdd:pfam00291  79 LKVTIVVPEDAPPGKLLLMRALGAEVVLVGGDYDEA-VAAARELAAEGPGAYYINQYDNPLNIEGYG-TIGLEILEQLgG 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 162 DIDYFVGGVGSGGTFAGVAEHLAASYRTESVI-VEPEGSILSGGNAH----------SHDIEGIGSEKWPSFLP----RA 226
Cdd:pfam00291 157 DPDAVVVPVGGGGLIAGIARGLKELGPDVRVIgVEPEGAPALARSLAagrpvpvpvaDTIADGLGVGDEPGALAldllDE 236
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1564862654 227 LVSDIIKVSDDAAFQNVKLLARQEGLLVGSSSGAALQGA-LEIKKHINKG-VIVTIFPD 283
Cdd:pfam00291 237 YVGEVVTVSDEEALEAMRLLARREGIVVEPSSAAALAALkLALAGELKGGdRVVVVLTG 295
PRK10717 PRK10717
cysteine synthase A; Provisional
5-291 5.12e-69

cysteine synthase A; Provisional


Pssm-ID: 182672 [Multi-domain]  Cd Length: 330  Bit Score: 217.42  E-value: 5.12e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   5 DLIGNTPLVLLESFSNK-DVQIYAKLEQYNPGGSVKDRLGKHLIETAIRENIIQKGDVVVEASAGNTGIGVAIAANHYGV 83
Cdd:PRK10717    9 DTIGNTPLIRLNRASEAtGCEILGKAEFLNPGGSVKDRAALNIIWDAEKRGLLKPGGTIVEGTAGNTGIGLALVAAARGY 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  84 SAVIFAPEGFSEEKISIIKALGAEVIRTDQT--------LGMAGAQKAARDYELQTGAYYLNQFESYRNPETYKSTIGKE 155
Cdd:PRK10717   89 KTVIVMPETQSQEKKDLLRALGAELVLVPAApyanpnnyVKGAGRLAEELVASEPNGAIWANQFDNPANREAHYETTGPE 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 156 I---TDklKDIDYFVGGVGSGGTFAGVAEHL-AASYRTESVIVEPEGS----------ILSGGnahSHDIEGIGSEKWPS 221
Cdd:PRK10717  169 IweqTD--GKVDGFVCAVGTGGTLAGVSRYLkETNPKVKIVLADPTGSalysyyktgeLKAEG---SSITEGIGQGRITA 243
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1564862654 222 FLPRALVSDIIKVSDDAAFQNVKLLARQEGLLVGSSSGAALQGALEIKKHINKG-VIVTIFPDGSDRYMSK 291
Cdd:PRK10717  244 NLEGAPIDDAIRIPDEEALSTAYRLLEEEGLCLGGSSGINVAAALRLARELGPGhTIVTILCDSGERYQSK 314
 
Name Accession Description Interval E-value
CysK COG0031
Cysteine synthase [Amino acid transport and metabolism]; Cysteine synthase is part of the ...
3-291 1.32e-120

Cysteine synthase [Amino acid transport and metabolism]; Cysteine synthase is part of the Pathway/BioSystem: Cysteine biosynthesis


Pssm-ID: 439802 [Multi-domain]  Cd Length: 301  Bit Score: 347.81  E-value: 1.32e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   3 AFDLIGNTPLVLLESFS-NKDVQIYAKLEQYNPGGSVKDRLGKHLIETAIRENIIQKGDVVVEASAGNTGIGVAIAANHY 81
Cdd:COG0031     7 ILELIGNTPLVRLNRLSpGPGAEIYAKLESFNPGGSVKDRIALSMIEDAEKRGLLKPGGTIVEATSGNTGIGLAMVAAAK 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  82 GVSAVIFAPEGFSEEKISIIKALGAEVIRTDQTLGMAGAQKAARdyELQ---TGAYYLNQFESYRNPETYKSTIGKEITD 158
Cdd:COG0031    87 GYRLILVMPETMSKERRALLRAYGAEVVLTPGAEGMKGAIDKAE--ELAaetPGAFWPNQFENPANPEAHYETTGPEIWE 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 159 KLK-DIDYFVGGVGSGGTFAGVAEHL-AASYRTESVIVEPEGS-ILSGGNAHSHDIEGIGSEKWPSFLPRALVSDIIKVS 235
Cdd:COG0031   165 QTDgKVDAFVAGVGTGGTITGVGRYLkERNPDIKIVAVEPEGSpLLSGGEPGPHKIEGIGAGFVPKILDPSLIDEVITVS 244
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1564862654 236 DDAAFQNVKLLARQEGLLVGSSSGAALQGALEIKKHINKG-VIVTIFPDGSDRYMSK 291
Cdd:COG0031   245 DEEAFAMARRLAREEGILVGISSGAAVAAALRLAKRLGPGkTIVTILPDSGERYLST 301
CBS_like cd01561
CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS ...
8-290 1.24e-113

CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.


Pssm-ID: 107204 [Multi-domain]  Cd Length: 291  Bit Score: 329.86  E-value: 1.24e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   8 GNTPLVLLESFSN-KDVQIYAKLEQYNPGGSVKDRLGKHLIETAIRENIIQKGDVVVEASAGNTGIGVAIAANHYGVSAV 86
Cdd:cd01561     1 GNTPLVRLNRLSPgTGAEIYAKLEFFNPGGSVKDRIALYMIEDAEKRGLLKPGTTIIEPTSGNTGIGLAMVAAAKGYRFI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  87 IFAPEGFSEEKISIIKALGAEVIRTD--QTLGMAGAQKAARDYELQT-GAYYLNQFESYRNPETYKSTIGKEITDKLKD- 162
Cdd:cd01561    81 IVMPETMSEEKRKLLRALGAEVILTPeaEADGMKGAIAKARELAAETpNAFWLNQFENPANPEAHYETTAPEIWEQLDGk 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 163 IDYFVGGVGSGGTFAGVAEHL-AASYRTESVIVEPEGSIL-SGGNAHSHDIEGIGSEKWPSFLPRALVSDIIKVSDDAAF 240
Cdd:cd01561   161 VDAFVAGVGTGGTITGVARYLkEKNPNVRIVGVDPVGSVLfSGGPPGPHKIEGIGAGFIPENLDRSLIDEVVRVSDEEAF 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1564862654 241 QNVKLLARQEGLLVGSSSGAALQGALEIKKHINKG-VIVTIFPDGSDRYMS 290
Cdd:cd01561   241 AMARRLAREEGLLVGGSSGAAVAAALKLAKRLGPGkTIVTILPDSGERYLS 291
cysK TIGR01139
cysteine synthase A; This model distinguishes cysteine synthase A (CysK) from cysteine ...
5-290 1.99e-87

cysteine synthase A; This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate. [Amino acid biosynthesis, Serine family]


Pssm-ID: 273465  Cd Length: 298  Bit Score: 263.46  E-value: 1.99e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   5 DLIGNTPLVLLESFSNKDVQIYAKLEQYNPGGSVKDRLGKHLIETAIRENIIQKGDVVVEASAGNTGIGVAIAANHYGVS 84
Cdd:TIGR01139   3 ELIGNTPLVRLNRIEGCNANVFVKLEGRNPSGSVKDRIALNMIWDAEKRGLLKPGKTIVEPTSGNTGIALAMVAAARGYK 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  85 AVIFAPEGFSEEKISIIKALGAEVIRTDQTLGMAGAQKAARDYELQTGAYY--LNQFESYRNPETYKSTIGKEI-TDKLK 161
Cdd:TIGR01139  83 LILTMPETMSIERRKLLKAYGAELVLTPGAEGMKGAIAKAEEIAASTPNSYfmLQQFENPANPEIHRKTTGPEIwRDTDG 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 162 DIDYFVGGVGSGGTFAGVAEHLAASY-RTESVIVEPEGS-ILSGGNAHSHDIEGIGSEKWPSFLPRALVSDIIKVSDDAA 239
Cdd:TIGR01139 163 KLDAFVAGVGTGGTITGVGEVLKEQKpNIKIVAVEPAESpVLSGGKPGPHKIQGIGAGFIPKNLNRSVIDEVITVSDEEA 242
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1564862654 240 FQNVKLLARQEGLLVGSSSGAALQGALEIKKHINKG-VIVTIFPDGSDRYMS 290
Cdd:TIGR01139 243 IETARRLAAEEGILVGISSGAAVAAALKLAKRPEPDkLIVVILPSTGERYLS 294
cysKM TIGR01136
cysteine synthase; This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and ...
5-290 1.20e-81

cysteine synthase; This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff. [Amino acid biosynthesis, Serine family]


Pssm-ID: 273463  Cd Length: 299  Bit Score: 248.74  E-value: 1.20e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   5 DLIGNTPLVLLESFSNK-DVQIYAKLEQYNPGGSVKDRLGKHLIETAIRENIIQKGDVVVEASAGNTGIGVAIAANHYGV 83
Cdd:TIGR01136   3 ELIGNTPLVRLNRLAPGcDARVLAKLEGFNPSGSVKDRIALSMILDAEKRGLLKPGDTIIEATSGNTGIALAMVAAARGY 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  84 SAVIFAPEGFSEEKISIIKALGAEVIRTDQTLGMAGAQKAARDYELQTGAY-YLNQFESYRNPETYKSTIGKEITDKLK- 161
Cdd:TIGR01136  83 KLILTMPETMSLERRKLLRAYGAELILTPGEEGMKGAIDKAEELAAETNKYvMLDQFENPANPEAHYKTTGPEIWRDTDg 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 162 DIDYFVGGVGSGGTFAGVAEHLAASY-RTESVIVEP-EGSILSGGNAHSHDIEGIGSEKWPSFLPRALVSDIIKVSDDAA 239
Cdd:TIGR01136 163 RIDHFVAGVGTGGTITGVGRYLKEQNpNIQIVAVEPaESPVLSGGEPGPHKIQGIGAGFIPKILDLSLIDEVITVSDEDA 242
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1564862654 240 FQNVKLLARQEGLLVGSSSGAALQGALEIKKHINKG--VIVTIFPDGSDRYMS 290
Cdd:TIGR01136 243 IETARRLAREEGILVGISSGAAVAAALKLAKRLENAdkVIVAILPDTGERYLS 295
cysta_beta TIGR01137
cystathionine beta-synthase; Members of this family closely resemble cysteine synthase but ...
5-295 5.61e-74

cystathionine beta-synthase; Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven. [Amino acid biosynthesis, Serine family]


Pssm-ID: 273464 [Multi-domain]  Cd Length: 455  Bit Score: 233.92  E-value: 5.61e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   5 DLIGNTPLVLLESFSnKDV--QIYAKLEQYNPGGSVKDRLGKHLIETAIRENIIQKGDVVVEASAGNTGIGVAIAANHYG 82
Cdd:TIGR01137   7 DLIGNTPLVRLNKVS-KGLkcELLAKCEFFNPGGSVKDRIALRMIEDAEASGRLKPGDTIIEPTSGNTGIGLALVAAIKG 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  83 VSAVIFAPEGFSEEKISIIKALGAEVIRT---------DQTLGMagAQKAARDYElqtGAYYLNQFESYRNPETYKSTIG 153
Cdd:TIGR01137  86 YKCIIVLPEKMSSEKVDVLRALGAEIVRTptaaafdspESHIGV--AKRLVREIP---GAHILDQYRNPSNPLAHYDTTG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 154 KEITDKLKD-IDYFVGGVGSGGTFAGVAEHLAASYRTESVI-VEPEGSILSGG------NAHSHDIEGIGSEKWPSFLPR 225
Cdd:TIGR01137 161 PEILEQCEGkLDMFVAGVGTGGTITGIARYLKESCPGCRIVgADPEGSILAQPeelnqtGRTPYKVEGIGYDFIPTVLDR 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1564862654 226 ALVSDIIKVSDDAAFQNVKLLARQEGLLVGSSSGAALQGALEIKKHINK--GVIVTIFPDGSDRYMSKqILN 295
Cdd:TIGR01137 241 KVVDEWIKTDDKESFTMARRLIKEEGLLVGGSSGSAVVAALKAAEDELQegQRCVVLLPDSIRNYMTK-FLN 311
PALP pfam00291
Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate ...
4-283 2.89e-69

Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4.


Pssm-ID: 459749 [Multi-domain]  Cd Length: 295  Bit Score: 216.79  E-value: 2.89e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   4 FDLIGNTPLVLLESFSNK-DVQIYAKLEQYNPGGSVKDRLGKHLIETAIREniiQKGDVVVEASAGNTGIGVAIAANHYG 82
Cdd:pfam00291   2 SLGIGPTPLVRLPRLSKElGVDVYLKLESLNPTGSFKDRGALNLLLRLKEG---EGGKTVVEASSGNHGRALAAAAARLG 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  83 VSAVIFAPEGFSEEKISIIKALGAEVIRTDQTLGMAgAQKAARDYELQTGAYYLNQFESYRNPETYKsTIGKEITDKL-K 161
Cdd:pfam00291  79 LKVTIVVPEDAPPGKLLLMRALGAEVVLVGGDYDEA-VAAARELAAEGPGAYYINQYDNPLNIEGYG-TIGLEILEQLgG 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 162 DIDYFVGGVGSGGTFAGVAEHLAASYRTESVI-VEPEGSILSGGNAH----------SHDIEGIGSEKWPSFLP----RA 226
Cdd:pfam00291 157 DPDAVVVPVGGGGLIAGIARGLKELGPDVRVIgVEPEGAPALARSLAagrpvpvpvaDTIADGLGVGDEPGALAldllDE 236
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1564862654 227 LVSDIIKVSDDAAFQNVKLLARQEGLLVGSSSGAALQGA-LEIKKHINKG-VIVTIFPD 283
Cdd:pfam00291 237 YVGEVVTVSDEEALEAMRLLARREGIVVEPSSAAALAALkLALAGELKGGdRVVVVLTG 295
PRK10717 PRK10717
cysteine synthase A; Provisional
5-291 5.12e-69

cysteine synthase A; Provisional


Pssm-ID: 182672 [Multi-domain]  Cd Length: 330  Bit Score: 217.42  E-value: 5.12e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   5 DLIGNTPLVLLESFSNK-DVQIYAKLEQYNPGGSVKDRLGKHLIETAIRENIIQKGDVVVEASAGNTGIGVAIAANHYGV 83
Cdd:PRK10717    9 DTIGNTPLIRLNRASEAtGCEILGKAEFLNPGGSVKDRAALNIIWDAEKRGLLKPGGTIVEGTAGNTGIGLALVAAARGY 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  84 SAVIFAPEGFSEEKISIIKALGAEVIRTDQT--------LGMAGAQKAARDYELQTGAYYLNQFESYRNPETYKSTIGKE 155
Cdd:PRK10717   89 KTVIVMPETQSQEKKDLLRALGAELVLVPAApyanpnnyVKGAGRLAEELVASEPNGAIWANQFDNPANREAHYETTGPE 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 156 I---TDklKDIDYFVGGVGSGGTFAGVAEHL-AASYRTESVIVEPEGS----------ILSGGnahSHDIEGIGSEKWPS 221
Cdd:PRK10717  169 IweqTD--GKVDGFVCAVGTGGTLAGVSRYLkETNPKVKIVLADPTGSalysyyktgeLKAEG---SSITEGIGQGRITA 243
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1564862654 222 FLPRALVSDIIKVSDDAAFQNVKLLARQEGLLVGSSSGAALQGALEIKKHINKG-VIVTIFPDGSDRYMSK 291
Cdd:PRK10717  244 NLEGAPIDDAIRIPDEEALSTAYRLLEEEGLCLGGSSGINVAAALRLARELGPGhTIVTILCDSGERYQSK 314
Trp-synth-beta_II cd00640
Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP) ...
10-284 4.61e-65

Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehyd catalyzes the conversion of L- or D-serine to pyruvate and ammonia. Thr-dehyd is active as a homodimer and catalyzes the conversion of L-threonine to 2-oxobutanoate and ammonia. DAL is also a homodimer and catalyzes the alpha, beta-elimination reaction of both L- and D-alpha, beta-diaminopropionate to form pyruvate and ammonia. Thr-synth catalyzes the formation of threonine and inorganic phosphate from O-phosphohomoserine.


Pssm-ID: 107202 [Multi-domain]  Cd Length: 244  Bit Score: 204.29  E-value: 4.61e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  10 TPLVLLESFSNK-DVQIYAKLEQYNPGGSVKDRLGKHLIETAIRENIIQKGdVVVEASAGNTGIGVAIAANHYGVSAVIF 88
Cdd:cd00640     1 TPLVRLKRLSKLgGANIYLKLEFLNPTGSFKDRGALNLILLAEEEGKLPKG-VIIESTGGNTGIALAAAAARLGLKCTIV 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  89 APEGFSEEKISIIKALGAEVIRTDQTLGmaGAQKAARDY-ELQTGAYYLNQFESYRNPETYKsTIGKEITDKLKD--IDY 165
Cdd:cd00640    80 MPEGASPEKVAQMRALGAEVVLVPGDFD--DAIALAKELaEEDPGAYYVNQFDNPANIAGQG-TIGLEILEQLGGqkPDA 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 166 FVGGVGSGGTFAGVAEHLAASY-RTESVIVEPEgsilsggnahshdiegigsekwpsflpralvsdIIKVSDDAAFQNVK 244
Cdd:cd00640   157 VVVPVGGGGNIAGIARALKELLpNVKVIGVEPE---------------------------------VVTVSDEEALEAIR 203
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1564862654 245 LLARQEGLLVGSSSGAALQGALEIKKHINKG-VIVTIFPDG 284
Cdd:cd00640   204 LLAREEGILVEPSSAAALAAALKLAKKLGKGkTVVVILTGG 244
cysM TIGR01138
cysteine synthase B; CysM differs from CysK in that it can also use thiosulfate instead of ...
5-290 9.81e-62

cysteine synthase B; CysM differs from CysK in that it can also use thiosulfate instead of sulfide, to produce cysteine thiosulfonate instead of cysteine. Alternate name: O-acetylserine (thiol)-lyase [Amino acid biosynthesis, Serine family]


Pssm-ID: 130208 [Multi-domain]  Cd Length: 290  Bit Score: 197.44  E-value: 9.81e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   5 DLIGNTPLVLLESF-SNKDVQIYAKLEQYNPGGSVKDRLGKHLIETAIRENIIQKGDVVVEASAGNTGIGVAIAANHYGV 83
Cdd:TIGR01138   4 QTVGNTPLVRLQRMgPENGSEVWLKLEGNNPAGSVKDRPALSMIVEAEKRGEIKPGDVLIEATSGNTGIALAMIAALKGY 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  84 SAVIFAPEGFSEEKISIIKALGAEVIRTDQTLGMAGAQKAARDYELQTGAYYLNQFESYRNPETYKSTIGKEITDKLK-D 162
Cdd:TIGR01138  84 RMKLLMPDNMSQERKAAMRAYGAELILVTKEEGMEGARDLALELANRGEGKLLDQFNNPDNPYAHYTSTGPEIWQQTGgR 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 163 IDYFVGGVGSGGTFAGVAEHLAASYRTESVI-VEP-EGSILSGgnahshdIEGIGSEKWPSFLPRALVSDIIKVSDDAAF 240
Cdd:TIGR01138 164 ITHFVSSMGTTGTIMGVSRFLKEQNPPVQIVgLQPeEGSSIPG-------IRRWPTEYLPGIFDASLVDRVLDIHQRDAE 236
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1564862654 241 QNVKLLARQEGLLVGSSSGAALQGALEIKKHINKGVIVTIFPDGSDRYMS 290
Cdd:TIGR01138 237 NTMRELAVREGIFCGVSSGGAVAAALRLARELPDAVVVAIICDRGDRYLS 286
PLN00011 PLN00011
cysteine synthase
5-295 1.37e-61

cysteine synthase


Pssm-ID: 177651  Cd Length: 323  Bit Score: 198.30  E-value: 1.37e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   5 DLIGNTPLVLLESFSNKDV-QIYAKLEQYNPGGSVKDRLGKHLIETAIRENIIQKG-DVVVEASAGNTGIGVAIAANHYG 82
Cdd:PLN00011   13 ELIGNTPMVYLNNIVDGCVaRIAAKLEMMEPCSSVKDRIAYSMIKDAEDKGLITPGkSTLIEATAGNTGIGLACIGAARG 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  83 VSAVIFAPEGFSEEKISIIKALGAEVIRTDQTLGMAGAQKAARDYELQT-GAYYLNQFESYRNPETYKSTIGKEI-TDKL 160
Cdd:PLN00011   93 YKVILVMPSTMSLERRIILRALGAEVHLTDQSIGLKGMLEKAEEILSKTpGGYIPQQFENPANPEIHYRTTGPEIwRDSA 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 161 KDIDYFVGGVGSGGTFAGVAEHLAASYRTESV-IVEP-EGSILSGGNAHSHDIEGIGSEKWPSFLPRALVSDIIKVSDDA 238
Cdd:PLN00011  173 GKVDILVAGVGTGGTATGVGKFLKEKNKDIKVcVVEPvESAVLSGGQPGPHLIQGIGSGIIPFNLDLTIVDEIIQVTGEE 252
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1564862654 239 AFQNVKLLARQEGLLVGSSSGAALQGALEI-KKHINKG-VIVTIFPDGSDRYMSKQILN 295
Cdd:PLN00011  253 AIETAKLLALKEGLLVGISSGAAAAAALKVaKRPENAGkLIVVIFPSGGERYLSTKLFE 311
PLN02565 PLN02565
cysteine synthase
5-290 6.69e-61

cysteine synthase


Pssm-ID: 166206  Cd Length: 322  Bit Score: 196.30  E-value: 6.69e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   5 DLIGNTPLVLLESFSNKDV-QIYAKLEQYNPGGSVKDRLGKHLIETAIRENIIQKGD-VVVEASAGNTGIGVAIAANHYG 82
Cdd:PLN02565   11 ELIGKTPLVYLNNVVDGCVaRIAAKLEMMEPCSSVKDRIGYSMITDAEEKGLIKPGEsVLIEPTSGNTGIGLAFMAAAKG 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  83 VSAVIFAPEGFSEEKISIIKALGAEVIRTDQTLGMAGAQKAARDYELQT-GAYYLNQFESYRNPETYKSTIGKEI-TDKL 160
Cdd:PLN02565   91 YKLIITMPASMSLERRIILLAFGAELVLTDPAKGMKGAVQKAEEILAKTpNSYILQQFENPANPKIHYETTGPEIwKGTG 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 161 KDIDYFVGGVGSGGTFAGVAEHLAASYRTESVI-VEP-EGSILSGGNAHSHDIEGIGSEKWPSFLPRALVSDIIKVSDDA 238
Cdd:PLN02565  171 GKVDAFVSGIGTGGTITGAGKYLKEQNPDIKLYgVEPvESAVLSGGKPGPHKIQGIGAGFIPGVLDVDLLDEVVQVSSDE 250
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1564862654 239 AFQNVKLLARQEGLLVGSSSGAALQGALEI-KKHINKG-VIVTIFPDGSDRYMS 290
Cdd:PLN02565  251 AIETAKLLALKEGLLVGISSGAAAAAAIKIaKRPENAGkLIVVIFPSFGERYLS 304
cysM PRK11761
cysteine synthase CysM;
5-290 7.17e-58

cysteine synthase CysM;


Pssm-ID: 236972  Cd Length: 296  Bit Score: 187.77  E-value: 7.17e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   5 DLIGNTPLVLLESFS-NKDVQIYAKLEQYNPGGSVKDRLGKHLIETAIRENIIQKGDVVVEASAGNTGIGVAIAANHYGV 83
Cdd:PRK11761    8 DTIGNTPLVKLQRLPpDRGNTILAKLEGNNPAGSVKDRPALSMIVQAEKRGEIKPGDTLIEATSGNTGIALAMIAAIKGY 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  84 SAVIFAPEGFSEEKISIIKALGAEVIRTDQTLGMAGAQKAARDYELQTGAYYLNQFESYRNPETYKSTIGKEI-TDKLKD 162
Cdd:PRK11761   88 RMKLIMPENMSQERRAAMRAYGAELILVPKEQGMEGARDLALQMQAEGEGKVLDQFANPDNPLAHYETTGPEIwRQTEGR 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 163 IDYFVGGVGSGGTFAGVAEHLAASYRTESVI-VEP-EGSilsggnahshDIEGIgsEKWPS-FLP----RALVSDIIKVS 235
Cdd:PRK11761  168 ITHFVSSMGTTGTIMGVSRYLKEQNPAVQIVgLQPeEGS----------SIPGI--RRWPEeYLPkifdASRVDRVLDVS 235
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1564862654 236 DDAAFQNVKLLARQEGLLVGSSSGAALQGALEIKKHINKGVIVTIFPDGSDRYMS 290
Cdd:PRK11761  236 QQEAENTMRRLAREEGIFCGVSSGGAVAAALRIARENPNAVIVAIICDRGDRYLS 290
PLN03013 PLN03013
cysteine synthase
6-290 1.61e-54

cysteine synthase


Pssm-ID: 178587 [Multi-domain]  Cd Length: 429  Bit Score: 183.05  E-value: 1.61e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   6 LIGNTPLVLLESFSNKDV-QIYAKLEQYNPGGSVKDRLGKHLIETAIRENIIQKG-DVVVEASAGNTGIGVAIAANHYGV 83
Cdd:PLN03013  120 LIGKTPMVYLNSIAKGCVaNIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGkSVLVEPTSGNTGIGLAFIAASRGY 199
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  84 SAVIFAPEGFSEEKISIIKALGAEVIRTDQTLGMAGA-QKAARDYELQTGAYYLNQFESYRNPETYKSTIGKEITDKLK- 161
Cdd:PLN03013  200 RLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAvQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKg 279
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 162 DIDYFVGGVGSGGTFAGVAEHLA-ASYRTESVIVEP-EGSILSGGNAHSHDIEGIGSEKWPSFLPRALVSDIIKVSDDAA 239
Cdd:PLN03013  280 KVDIFVAGIGTGGTITGVGRFIKeKNPKTQVIGVEPtESDILSGGKPGPHKIQGIGAGFIPKNLDQKIMDEVIAISSEEA 359
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1564862654 240 FQNVKLLARQEGLLVGSSSGAALQGALEI-KKHINKG-VIVTIFPDGSdRYMS 290
Cdd:PLN03013  360 IETAKQLALKEGLMVGISSGAAAAAAIKVaKRPENAGkLIAVSLFASG-RDIY 411
PLN02556 PLN02556
cysteine synthase/L-3-cyanoalanine synthase
6-290 5.63e-51

cysteine synthase/L-3-cyanoalanine synthase


Pssm-ID: 178171 [Multi-domain]  Cd Length: 368  Bit Score: 172.07  E-value: 5.63e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   6 LIGNTPLVLLESFSNK-DVQIYAKLEQYNPGGSVKDRLGKHLIETAIRENIIQKGD-VVVEASAGNTGIGVAIAANHYGV 83
Cdd:PLN02556   56 LIGKTPLVYLNKVTEGcGAYIAAKQEMFQPTSSIKDRPALAMIEDAEKKNLITPGKtTLIEPTSGNMGISLAFMAAMKGY 135
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  84 SAVIFAPEGFSEEKISIIKALGAEVIRTDQTLGMAGA-QKAARDYELQTGAYYLNQFESYRNPETYKSTIGKEI-TDKLK 161
Cdd:PLN02556  136 KMILTMPSYTSLERRVTMRAFGAELVLTDPTKGMGGTvKKAYELLESTPDAFMLQQFSNPANTQVHFETTGPEIwEDTLG 215
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 162 DIDYFVGGVGSGGTFAGVAEHLAASYRTESVI-VEP-EGSILSGGNAHSHDIEGIGSEKWPSFLPRALVSDIIKVSDDAA 239
Cdd:PLN02556  216 QVDIFVMGIGSGGTVSGVGKYLKSKNPNVKIYgVEPaESNVLNGGKPGPHHITGNGVGFKPDILDMDVMEKVLEVSSEDA 295
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1564862654 240 FQNVKLLARQEGLLVGSSSGAALQGALEI-KKHINKG-VIVTIFPDGSDRYMS 290
Cdd:PLN02556  296 VNMARELALKEGLMVGISSGANTVAALRLaKMPENKGkLIVTVHPSFGERYLS 348
IlvA COG1171
Threonine deaminase [Amino acid transport and metabolism]; Threonine deaminase is part of the ...
10-280 8.96e-36

Threonine deaminase [Amino acid transport and metabolism]; Threonine deaminase is part of the Pathway/BioSystem: Isoleucine, leucine, valine biosynthesis


Pssm-ID: 440784 [Multi-domain]  Cd Length: 327  Bit Score: 130.93  E-value: 8.96e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  10 TPLVLLESFSNK-DVQIYAKLEQYNPGGSVKDRLGKHLIeTAIRENIIQKGdvVVEASAGNTGIGVAIAANHYGVSAVIF 88
Cdd:COG1171    25 TPLLRSPTLSERlGAEVYLKLENLQPTGSFKLRGAYNAL-ASLSEEERARG--VVAASAGNHAQGVAYAARLLGIPATIV 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  89 APEGFSEEKISIIKALGAEVIRTDQTLgmAGAQKAARDYELQTGAYYLnqfESYRNPET---YkSTIGKEITDKLKDIDY 165
Cdd:COG1171   102 MPETAPAVKVAATRAYGAEVVLHGDTY--DDAEAAAAELAEEEGATFV---HPFDDPDViagQ-GTIALEILEQLPDLDA 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 166 FVGGVGSGGTFAGVAEHLAASY-RTESVIVEPEG------SILSGgnaHSHDIEG------------IGSEKWPsfLPRA 226
Cdd:COG1171   176 VFVPVGGGGLIAGVAAALKALSpDIRVIGVEPEGaaamyrSLAAG---EPVTLPGvdtiadglavgrPGELTFE--ILRD 250
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1564862654 227 LVSDIIKVSDDAAFQNVKLLARQEGLLVGSSSGAALQGALEIKKHINKGVIVTI 280
Cdd:COG1171   251 LVDDIVTVSEDEIAAAMRLLLERTKIVVEPAGAAALAALLAGKERLKGKRVVVV 304
Thr-dehyd cd01562
Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. ...
10-278 7.05e-33

Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.


Pssm-ID: 107205 [Multi-domain]  Cd Length: 304  Bit Score: 122.60  E-value: 7.05e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  10 TPLVLLESFSNK-DVQIYAKLEQYNPGGSVKDRLGKHLIETAIRENIIqKGdvVVEASAGNTGIGVAIAANHYGVSAVIF 88
Cdd:cd01562    18 TPLLTSPTLSELlGAEVYLKCENLQKTGSFKIRGAYNKLLSLSEEERA-KG--VVAASAGNHAQGVAYAAKLLGIPATIV 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  89 APEGFSEEKISIIKALGAEVIRTDQTlgMAGAQKAARDYELQTGAYYLNQFESyrnPETYK--STIGKEITDKLKDIDYF 166
Cdd:cd01562    95 MPETAPAAKVDATRAYGAEVVLYGED--FDEAEAKARELAEEEGLTFIHPFDD---PDVIAgqGTIGLEILEQVPDLDAV 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 167 VGGVGSGGTFAGVAEHLAASYRTESVI-VEPEG------SILSGG----NAHSHDIEGIG----SEKWPSFLpRALVSDI 231
Cdd:cd01562   170 FVPVGGGGLIAGIATAVKALSPNTKVIgVEPEGapamaqSLAAGKpvtlPEVDTIADGLAvkrpGELTFEII-RKLVDDV 248
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1564862654 232 IKVSDDAAFQNVKLLARQEGLLVGSSSGAALQGALEIK-KHINKGVIV 278
Cdd:cd01562   249 VTVSEDEIAAAMLLLFEREKLVAEPAGALALAALLSGKlDLKGKKVVV 296
PLN02356 PLN02356
phosphateglycerate kinase
5-291 7.37e-32

phosphateglycerate kinase


Pssm-ID: 215204  Cd Length: 423  Bit Score: 122.41  E-value: 7.37e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   5 DLIGNTPLVLLESFSNKD-VQIYAKLEQYNPGGSVKDRLGKHLIETAIRENIIQKGDVVVEASAGNTGIGVAIAANHYGV 83
Cdd:PLN02356   49 DAIGNTPLIRINSLSEATgCEILGKCEFLNPGGSVKDRVAVKIIEEALESGQLFPGGVVTEGSAGSTAISLATVAPAYGC 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  84 SAVIFAPEGFSEEKISIIKALGAEVIRT--------DQTLGMAgAQKAARDYELQ------------------------- 130
Cdd:PLN02356  129 KCHVVIPDDVAIEKSQILEALGATVERVrpvsithkDHYVNIA-RRRALEANELAskrrkgsetdgihlektngciseee 207
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 131 ----------TGAYYLNQFESYRNPETYKSTIGKEITDKLK-DIDYFVGGVGSGGTFAGVAEHLA-ASYRTESVIVEPEG 198
Cdd:PLN02356  208 kenslfssscTGGFFADQFENLANFRAHYEGTGPEIWEQTQgNLDAFVAAAGTGGTLAGVSRFLQeKNPNIKCFLIDPPG 287
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 199 SIL----SGGNAHSHD--------------IEGIGSEKWPSFLPRALVSDIIKVSDDAAFQNVKLLARQEGLLVGSSSGA 260
Cdd:PLN02356  288 SGLfnkvTRGVMYTREeaegrrlknpfdtiTEGIGINRLTQNFLMAKLDGAFRGTDKEAVEMSRYLLKNDGLFVGSSSAM 367
                         330       340       350
                  ....*....|....*....|....*....|..
gi 1564862654 261 ALQGALEIKKHINKG-VIVTIFPDGSDRYMSK 291
Cdd:PLN02356  368 NCVGAVRVAQSLGPGhTIVTILCDSGMRHLSK 399
PRK08246 PRK08246
serine/threonine dehydratase;
10-262 1.13e-26

serine/threonine dehydratase;


Pssm-ID: 181319 [Multi-domain]  Cd Length: 310  Bit Score: 106.19  E-value: 1.13e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  10 TPLVLLESFSNKDVQIYAKLEQYNPGGSVKDRLGKHLIETA-IREniiqkgDVVVEASAGNTGIGVAIAANHYGVSAVIF 88
Cdd:PRK08246   24 TPVLEADGAGFGPAPVWLKLEHLQHTGSFKARGAFNRLLAApVPA------AGVVAASGGNAGLAVAYAAAALGVPATVF 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  89 APEGFSEEKISIIKALGAEVIRTDQTlgMAGAQKAARDYELQTGAYYLNqfeSYRNPETY--KSTIGKEITDKLKDIDYF 166
Cdd:PRK08246   98 VPETAPPAKVARLRALGAEVVVVGAE--YADALEAAQAFAAETGALLCH---AYDQPEVLagAGTLGLEIEEQAPGVDTV 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 167 VGGVGSGGTFAGVAehLAASYRTESVIVEPEGSI---------------LSGGNAHSHDIEGIGSEKWPsfLPRALVSDI 231
Cdd:PRK08246  173 LVAVGGGGLIAGIA--AWFEGRARVVAVEPEGAPtlhaalaagepvdvpVSGIAADSLGARRVGEIAFA--LARAHVVTS 248
                         250       260       270
                  ....*....|....*....|....*....|.
gi 1564862654 232 IKVSDDAAFQNVKLLARQEGLLVGSSSGAAL 262
Cdd:PRK08246  249 VLVSDEAIIAARRALWEELRLAVEPGAATAL 279
Thr-synth_1 cd01563
Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last ...
8-277 1.99e-24

Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.


Pssm-ID: 107206 [Multi-domain]  Cd Length: 324  Bit Score: 100.36  E-value: 1.99e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   8 GNTPLVLLESFSNK--DVQIYAKLEQYNPGGSVKDRLGKHLIETAIRENIiqkgDVVVEASAGNTGIGVAIAANHYGVSA 85
Cdd:cd01563    21 GNTPLVRAPRLGERlgGKNLYVKDEGLNPTGSFKDRGMTVAVSKAKELGV----KAVACASTGNTSASLAAYAARAGIKC 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  86 VIFAPEGFSEEKISIIKALGAEVIRTDQTLGmaGAQKAARDYELQTGAYYLNQFESYRnPETYKsTIGKEITDKLKDI-- 163
Cdd:cd01563    97 VVFLPAGKALGKLAQALAYGATVLAVEGNFD--DALRLVRELAEENWIYLSNSLNPYR-LEGQK-TIAFEIAEQLGWEvp 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 164 DYFVGGVGSGGTFAGV---AEHLAASYRTES----VIVEPEGS--ILSGGNAHSHDIE------------GIGSekwPSF 222
Cdd:cd01563   173 DYVVVPVGNGGNITAIwkgFKELKELGLIDRlprmVGVQAEGAapIVRAFKEGKDDIEpvenpetiataiRIGN---PAS 249
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1564862654 223 LPRALVS------DIIKVSDDAAFQNVKLLARQEGLLVGSSSGAALQGAleiKKHINKGVI 277
Cdd:cd01563   250 GPKALRAvresggTAVAVSDEEILEAQKLLARTEGIFVEPASAASLAGL---KKLREEGII 307
PRK06815 PRK06815
threonine/serine dehydratase;
10-270 7.08e-24

threonine/serine dehydratase;


Pssm-ID: 180709 [Multi-domain]  Cd Length: 317  Bit Score: 99.00  E-value: 7.08e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  10 TPL---VLLESFSNKDVqiYAKLEQYNPGGSVKDR--LGKHLIETAIREniiQKGdvVVEASAGNTGIGVAIAANHYGVS 84
Cdd:PRK06815   21 TPLehsPLLSQHTGCEV--YLKCEHLQHTGSFKFRgaSNKLRLLNEAQR---QQG--VITASSGNHGQGVALAAKLAGIP 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  85 AVIFAPEGFSEEKISIIKALGAEVIRTDQTlgMAGAQKAARDYELQTGAYYLNqfeSYRNPETY--KSTIGKEITDKLKD 162
Cdd:PRK06815   94 VTVYAPEQASAIKLDAIRALGAEVRLYGGD--ALNAELAARRAAEQQGKVYIS---PYNDPQVIagQGTIGMELVEQQPD 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 163 IDYFVGGVGSGGTFAGVAEHLAA-SYRTESVIVEPEGS-------------------ILSGGNAHshdieGI--GSEKWP 220
Cdd:PRK06815  169 LDAVFVAVGGGGLISGIATYLKTlSPKTEIIGCWPANSpslytsleageivevaeqpTLSDGTAG-----GVepGAITFP 243
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1564862654 221 sfLPRALVSDIIKVSDDAAFQNVKLLARQEGLLVGSSSGAALQGALEIKK 270
Cdd:PRK06815  244 --LCQQLIDQKVLVSEEEIKEAMRLIAETDRWLIEGAAGVALAAALKLAP 291
ThrC COG0498
Threonine synthase [Amino acid transport and metabolism]; Threonine synthase is part of the ...
8-277 6.92e-21

Threonine synthase [Amino acid transport and metabolism]; Threonine synthase is part of the Pathway/BioSystem: Threonine biosynthesis


Pssm-ID: 440264 [Multi-domain]  Cd Length: 394  Bit Score: 91.41  E-value: 6.92e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   8 GNTPLVLLESFSNK-DVQIYAKLEQYNPGGSVKDR----LGKHLIETAIReniiqkgdVVVEASAGNTGIGVAIAANHYG 82
Cdd:COG0498    65 GGTPLVKAPRLADElGKNLYVKEEGHNPTGSFKDRamqvAVSLALERGAK--------TIVCASSGNGSAALAAYAARAG 136
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  83 VSAVIFAPEGF-SEEKISIIKALGAEVIRTDQTLG--MAGAQKAARDYELqtgaYYLNQFESYRnPETYKsTIGKEITDK 159
Cdd:COG0498   137 IEVFVFVPEGKvSPGQLAQMLTYGAHVIAVDGNFDdaQRLVKELAADEGL----YAVNSINPAR-LEGQK-TYAFEIAEQ 210
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 160 LKDI-DYFVGGVGSGGTFAGV---AEHLAASYRTES----VIVEPEGS--ILSGGNAHSHDIEGIGSE--------KWPS 221
Cdd:COG0498   211 LGRVpDWVVVPTGNGGNILAGykaFKELKELGLIDRlprlIAVQATGCnpILTAFETGRDEYEPERPEtiapsmdiGNPS 290
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1564862654 222 FLPRALV------SDIIKVSDDAAFQNVKLLARQEGLLVGSSSGAALQGAleiKKHINKGVI 277
Cdd:COG0498   291 NGERALFalresgGTAVAVSDEEILEAIRLLARREGIFVEPATAVAVAGL---RKLREEGEI 349
PRK08639 PRK08639
threonine dehydratase; Validated
5-198 1.96e-19

threonine dehydratase; Validated


Pssm-ID: 236318 [Multi-domain]  Cd Length: 420  Bit Score: 87.55  E-value: 1.96e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   5 DLIGNTPLVLLESFSNK-DVQIYAKLEQYNPGGSVKDRLGKHLIETAIREniiQKGDVVVEASAGNTGIGVAIAANHYGV 83
Cdd:PRK08639   21 DVVPETPLQRNDYLSEKyGANVYLKREDLQPVRSYKLRGAYNAISQLSDE---ELAAGVVCASAGNHAQGVAYACRHLGI 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  84 SAVIFAPEGFSEEKISIIKALGAEVIrtdqTLGMAG-----AQKAARDYELQTGAYYLNQFEsyrNPETY--KSTIGKEI 156
Cdd:PRK08639   98 PGVIFMPVTTPQQKIDQVRFFGGEFV----EIVLVGdtfddSAAAAQEYAEETGATFIPPFD---DPDVIagQGTVAVEI 170
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 1564862654 157 ---TDKLKDIDYFVGGVGSGGTFAGVAEHLAA-SYRTESVIVEPEG 198
Cdd:PRK08639  171 leqLEKEGSPDYVFVPVGGGGLISGVTTYLKErSPKTKIIGVEPAG 216
PRK06381 PRK06381
threonine synthase; Validated
24-270 2.80e-18

threonine synthase; Validated


Pssm-ID: 235789  Cd Length: 319  Bit Score: 83.22  E-value: 2.80e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  24 QIYAKLEQYNPGGSVKDRLGKHLIETAIRENIiqkgDVVVEASAGNTGIGVAIAANHYGVSAVIFAPEGFSEEKISIIKA 103
Cdd:PRK06381   32 KIYLKFEGANPTGTQKDRIAEAHVRRAMRLGY----SGITVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEK 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 104 LGAEVIRTDqtlgmaGAQKAA----RDYELQTGAYYLN--QFESYRNPETYkSTIGKEITDKLKDIDYFVG-GVGSGGTF 176
Cdd:PRK06381  108 YGAEIIYVD------GKYEEAversRKFAKENGIYDANpgSVNSVVDIEAY-SAIAYEIYEALGDVPDAVAvPVGNGTTL 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 177 AGVAEHLAASYRTESVIVEPE--GSILSGGN----AHSHdiegiGSEK--------------------WPSF-LPRALVS 229
Cdd:PRK06381  181 AGIYHGFRRLYDRGKTSRMPRmiGVSTSGGNqiveSFKR-----GSSEvvdlevdeiretavneplvsYRSFdGDNALEA 255
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1564862654 230 ------DIIKVSDDAAFQNVKLLARQEGLLVGSSSGAALQGALEIKK 270
Cdd:PRK06381  256 iydshgYAFGFSDDEMVKYAELLRRMEGLNALPASASALAALVKYLK 302
L-Ser-dehyd cd06448
Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the ...
9-262 3.57e-17

Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.


Pssm-ID: 107209  Cd Length: 316  Bit Score: 80.04  E-value: 3.57e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   9 NTPLvlLESFS---NKDVQIYAKLEQYNPGGSVKDRLGKHLIETAIrENIIQKGDVVVEASAGNTGIGVAIAANHYGVSA 85
Cdd:cd06448     1 KTPL--IESTAlskTAGCNVFLKLENLQPSGSFKIRGIGHLCQKSA-KQGLNECVHVVCSSGGNAGLAAAYAARKLGVPC 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  86 VIFAPEGFSEEKISIIKALGAEVIRTDQTLGMAGAQKAARDYELQTGAYYLNQFEsyrNPETYK--STIGKEITDKLKD- 162
Cdd:cd06448    78 TIVVPESTKPRVVEKLRDEGATVVVHGKVWWEADNYLREELAENDPGPVYVHPFD---DPLIWEghSSMVDEIAQQLQSq 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 163 --IDYFVGGVGSGGTFAGVAEHL--AASYRTESVIVEPEG------SILSGGNAHSHDIEGI---------GSEKWPSFL 223
Cdd:cd06448   155 ekVDAIVCSVGGGGLLNGIVQGLerNGWGDIPVVAVETEGahslnaSLKAGKLVTLPKITSVatslgaktvSSQALEYAQ 234
                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 1564862654 224 PRALVSdiIKVSDDAAFQNVKLLARQEGLLVGSSSGAAL 262
Cdd:cd06448   235 EHNIKS--EVVSDRDAVQACLRFADDERILVEPACGAAL 271
eutB PRK07476
threonine dehydratase; Provisional
10-280 6.21e-15

threonine dehydratase; Provisional


Pssm-ID: 236025 [Multi-domain]  Cd Length: 322  Bit Score: 73.85  E-value: 6.21e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  10 TPLVLLESFSNK-DVQIYAKLEQYNPGGSVKDRLGKHLIeTAIRENIIQKGdvVVEASAGNTGIGVAIAANHYGVSAVIF 88
Cdd:PRK07476   20 TPLVASASLSARaGVPVWLKLETLQPTGSFKLRGATNAL-LSLSAQERARG--VVTASTGNHGRALAYAARALGIRATIC 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  89 APEGFSEEKISIIKALGAEVIRT--DQTLGMAGAQKAARDyelqTGAYYLNQFEsyrNPETY--KSTIGKEITDKLKDID 164
Cdd:PRK07476   97 MSRLVPANKVDAIRALGAEVRIVgrSQDDAQAEVERLVRE----EGLTMVPPFD---DPRIIagQGTIGLEILEALPDVA 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 165 YFVGGVGSGGTFAGVAEHLAASYRTESVIvepeGSILSGGNA--------HSHDIE-----------GIGSEKWPSF-LP 224
Cdd:PRK07476  170 TVLVPLSGGGLASGVAAAVKAIRPAIRVI----GVSMERGAAmhaslaagRPVQVEevptladslggGIGLDNRYTFaMC 245
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 225 RALVSDIIKVSDDAAFQNVKLLARQEGLLV-GSSS---GAALQGALEIKkhinKGVIVTI 280
Cdd:PRK07476  246 RALLDDVVLLDEAEIAAGIRHAYREERLVVeGAGAvgiAALLAGKIAAR----DGPIVVV 301
PRK08206 PRK08206
diaminopropionate ammonia-lyase; Provisional
61-271 6.56e-14

diaminopropionate ammonia-lyase; Provisional


Pssm-ID: 236186  Cd Length: 399  Bit Score: 71.45  E-value: 6.56e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  61 VVVEASAGNTGIGVAIAANHYGVSAVIFAPEGFSEEKISIIKALGAEVIRT----DQTLGMAGAQKAARDYEL-QTGAYy 135
Cdd:PRK08206  118 TFATATDGNHGRGVAWAAQQLGQKAVIYMPKGSSEERVDAIRALGAECIITdgnyDDSVRLAAQEAQENGWVVvQDTAW- 196
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 136 lnqfESYRNPET-----YkSTIGKEITDKLKDIDY-----FV-GGVGSggtFAG-VAEHLAASY---RTESVIVEPEGS- 199
Cdd:PRK08206  197 ----EGYEEIPTwimqgY-GTMADEAVEQLKEMGVppthvFLqAGVGS---LAGaVLGYFAEVYgeqRPHFVVVEPDQAd 268
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 200 --ILSGGNAHSHDIEG----------------IGsekWPsFLPRAlVSDIIKVSDDAAFQNVKLLARQEG----LLVGSS 257
Cdd:PRK08206  269 clYQSAVDGKPVAVTGdmdtimaglacgepnpLA---WE-ILRNC-ADAFISCPDEVAALGMRILANPLGgdppIVSGES 343
                         250
                  ....*....|....
gi 1564862654 258 SGAALQGALEIKKH 271
Cdd:PRK08206  344 GAVGLGALAALMTD 357
PLN02970 PLN02970
serine racemase
23-278 7.00e-14

serine racemase


Pssm-ID: 215524 [Multi-domain]  Cd Length: 328  Bit Score: 70.86  E-value: 7.00e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  23 VQIYAKLEQYNPGGSVKDRLGKHLIETAIRENIiQKGdvVVEASAGNTGIGVAIAANHYGVSAVIFAPEGFSEEKISIIK 102
Cdd:PLN02970   42 RSLFFKCECFQKGGAFKFRGACNAIFSLSDDQA-EKG--VVTHSSGNHAAALALAAKLRGIPAYIVVPKNAPACKVDAVI 118
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 103 ALGAEVIRTDQTLgMAGAQKAARDYElQTGAYYLNQFEsYRNPETYKSTIGKEITDKLKDIDYFVGGVGSGGTFAGVAeh 182
Cdd:PLN02970  119 RYGGIITWCEPTV-ESREAVAARVQQ-ETGAVLIHPYN-DGRVISGQGTIALEFLEQVPELDVIIVPISGGGLISGIA-- 193
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 183 LAASYRTES---VIVEPEG------SILSGGNAHSHDIEGI--------GSEKWPsfLPRALVSDIIKVSDDAAFQNVKL 245
Cdd:PLN02970  194 LAAKAIKPSikiIAAEPKGaddaaqSKAAGEIITLPVTNTIadglraslGDLTWP--VVRDLVDDVITVDDKEIIEAMKL 271
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1564862654 246 LARQEGLLVGSSSGAALQGALE--------IKKHINKGVIV 278
Cdd:PLN02970  272 CYERLKVVVEPSGAIGLAAALSdsfrsnpaWKGCKNVGIVL 312
PRK08329 PRK08329
threonine synthase; Validated
23-179 2.06e-12

threonine synthase; Validated


Pssm-ID: 236244 [Multi-domain]  Cd Length: 347  Bit Score: 66.77  E-value: 2.06e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  23 VQIYAKLEQYNPGGSVKDRlGKHLIETAIRENIIQKgdvVVEASAGNTGIGVAIAANHYGVSAVIFAPEGFSEEKISIIK 102
Cdd:PRK08329   72 IKVYFKLDYLQPTGSFKDR-GTYVTVAKLKEEGINE---VVIDSSGNAALSLALYSLSEGIKVHVFVSYNASKEKISLLS 147
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 103 ALGAEV--IRTDQtlgMAGAQKAARdYELQTGAYYLNQfesYRNP---ETYKsTIGKEITDKLKDIDYFVGGVGSGGTFA 177
Cdd:PRK08329  148 RLGAELhfVEGDR---MEVHEEAVK-FSKRNNIPYVSH---WLNPyflEGTK-TIAYEIYEQIGVPDYAFVPVGSGTLFL 219

                  ..
gi 1564862654 178 GV 179
Cdd:PRK08329  220 GI 221
Trp-synth_B cd06446
Tryptophan synthase-beta: Tryptophan synthase is a bifunctional enzyme that catalyses the ...
10-280 2.20e-12

Tryptophan synthase-beta: Tryptophan synthase is a bifunctional enzyme that catalyses the last two steps in the biosynthesis of L-tryptophan via its alpha and beta reactions. In the alpha reaction, indole 3-glycerol phosphate is cleaved reversibly to glyceraldehyde 3-phosphate and indole at the active site of the alpha subunit. In the beta reaction, indole undergoes a PLP-dependent reaction with L-serine to form L-tryptophan at the active site of the beta subunit. Members of this CD, Trp-synth_B, are found in all three major phylogenetic divisions.


Pssm-ID: 107207  Cd Length: 365  Bit Score: 66.79  E-value: 2.20e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  10 TPLVLLESFSNK--DVQIYAKLEQYNPGGSvkdrlgkHLIETAIRENIIQKGD----VVVEASAGNTGIGVAIAANHYGV 83
Cdd:cd06446    35 TPLYRAKRLSEYlgGAKIYLKREDLNHTGA-------HKINNALGQALLAKRMgkkrVIAETGAGQHGVATATACALFGL 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  84 SAVIFAPEGFSEEK---ISIIKALGAEVIRT---DQTLGMAgAQKAARDY--ELQTGAYYLNqfeSYRNPETY------- 148
Cdd:cd06446   108 ECEIYMGAVDVERQplnVFRMELLGAEVVPVpsgSGTLKDA-ISEAIRDWvtNVEDTHYLLG---SVVGPHPYpnmvrdf 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 149 KSTIGKEITDKLKDI-----DYFVGGVGSGGTFAGVAEHLAASYRTESVIVEPEG-SILSGGNA---------------- 206
Cdd:cd06446   184 QSVIGEEAKKQILEKegelpDVVIACVGGGSNAAGLFYPFINDKDVKLIGVEAGGcGLETGGHAaylfggtagvlhglkm 263
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 207 -------------HSH----DIEGIGSEKwpSFLPRALVSDIIKVSDDAAFQNVKLLARQEGLLVGSSSGAALQGALEIK 269
Cdd:cd06446   264 ytlqdedgqivppHSIsaglDYPGVGPEH--AYLKDSGRVEYVAVTDEEALEAFKLLARTEGIIPALESSHAIAYAIKLA 341
                         330
                  ....*....|.
gi 1564862654 270 KHINKGVIVTI 280
Cdd:cd06446   342 KKLGKEKVIVV 352
PLN02550 PLN02550
threonine dehydratase
4-265 1.36e-11

threonine dehydratase


Pssm-ID: 178165 [Multi-domain]  Cd Length: 591  Bit Score: 64.94  E-value: 1.36e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   4 FDLIGNTPLVLLESFSNK-DVQIYAKLEQYNPGGSVKDRLGKHLIETAIRENIiQKGdvVVEASAGNTGIGVAIAANHYG 82
Cdd:PLN02550  104 YDVAIESPLQLAKKLSERlGVKVLLKREDLQPVFSFKLRGAYNMMAKLPKEQL-DKG--VICSSAGNHAQGVALSAQRLG 180
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  83 VSAVIFAPEGFSEEKISIIKALGAEVIRTDQTLGMagAQKAARDYELQTGAYYLNQFEsyrNPE--TYKSTIGKEITDKL 160
Cdd:PLN02550  181 CDAVIAMPVTTPEIKWQSVERLGATVVLVGDSYDE--AQAYAKQRALEEGRTFIPPFD---HPDviAGQGTVGMEIVRQH 255
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 161 KDIDY--FVgGVGSGGTFAGVAEHLAASYRTESVI-VEPEGS---ILS------------GGNAHSHDIEGIGSEKWPsf 222
Cdd:PLN02550  256 QGPLHaiFV-PVGGGGLIAGIAAYVKRVRPEVKIIgVEPSDAnamALSlhhgervmldqvGGFADGVAVKEVGEETFR-- 332
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1564862654 223 LPRALVSDIIKVSDDAAFQNVKLLARQEGLLVGSSSGAALQGA 265
Cdd:PLN02550  333 LCRELVDGVVLVSRDAICASIKDMFEEKRSILEPAGALALAGA 375
thrC TIGR00260
threonine synthase; Involved in threonine biosynthesis it catalyses the reaction ...
8-277 3.21e-11

threonine synthase; Involved in threonine biosynthesis it catalyses the reaction O-PHOSPHO-L-HOMOSERINE + H(2)O = L-THREONINE + ORTHOPHOSPHATE using pyridoxal phosphate as a cofactor. the enzyme is distantly related to the serine/threonine dehydratases which are also pyridoxal-phosphate dependent enzymes. the pyridoxal-phosphate binding site is a Lys (K) residues present at residue 70 of the model. [Amino acid biosynthesis, Aspartate family]


Pssm-ID: 272986 [Multi-domain]  Cd Length: 327  Bit Score: 63.17  E-value: 3.21e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   8 GNTPLV----LLESFSNKDVqiYAKLEQYNPGGSVKDRLGKHLIeTAIREniiQKGDVVVEASAGNTGIGVAIAANHYGV 83
Cdd:TIGR00260  21 GVTPLFrapaLAANVGIKNL--YVKELGHNPTLSFKDRGMAVAL-TKALE---LGNDTVLCASTGNTGAAAAAYAGKAGL 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  84 SAVIFAPEG-FSEEKISIIKALGAEVIRTDQTLGmaGAQKAARDYELQTGAYYLNQFES--YRnPETYKsTIGKEITDKL 160
Cdd:TIGR00260  95 KVVVLYPAGkISLGKLAQALGYNAEVVAIDGNFD--DAQRLVKQLFEDKPALGLNSANSipYR-LEGQK-TYAFEAVEQL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 161 --KDIDYFVGGVGSGGTF----AGVAEH--LAASYRTESVIVEPEGS------ILSGGN----------AHSHDIeGIgs 216
Cdd:TIGR00260 171 gwEAPDKVVVPVPNSGNFgaiwKGFKEKkmLGLDSLPVKRGIQAEGAadivraFLEGGQwepietpetlSTAMDI-GN-- 247
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1564862654 217 ekwPSFLPRAL------VSDIIKVSDDAAFQNVKLLARQEGLLVGSSSGAALQGaleIKKHINKGVI 277
Cdd:TIGR00260 248 ---PANWPRALeafrrsNGYAEDLSDEEILEAIKLLAREEGYFVEPHSAVAVAA---LLKLVEKGTA 308
PRK08638 PRK08638
bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;
10-284 7.74e-11

bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;


Pssm-ID: 236317 [Multi-domain]  Cd Length: 333  Bit Score: 62.06  E-value: 7.74e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  10 TPLVLLESFSNK-DVQIYAKLEQYNPGGSVKDRLG----KHLIETaireniiQKGDVVVEASAGNTGIGVAIAANHYGVS 84
Cdd:PRK08638   28 TPLPRSNYLSERcKGEIFLKLENMQRTGSFKIRGAfnklSSLTDA-------EKRKGVVACSAGNHAQGVALSCALLGID 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  85 AVIFAPEGFSEEKISIIKALGAEVIRTDQTLGMAGAQkaARDYELQTGAYYLNqfeSYRNPETY--KSTIGKEITDKLKD 162
Cdd:PRK08638  101 GKVVMPKGAPKSKVAATCGYGAEVVLHGDNFNDTIAK--VEEIVEEEGRTFIP---PYDDPKVIagQGTIGLEILEDLWD 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 163 IDYFVGGVGSGGTFAGVAEHL--------------------AASYRTESVIVEPEGSILSGGNahshDIEGIGSEKWPsf 222
Cdd:PRK08638  176 VDTVIVPIGGGGLIAGIAVALksinptihiigvqsenvhgmAASFYAGEITTHRTTGTLADGC----DVSRPGNLTYE-- 249
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1564862654 223 LPRALVSDIIKVSDDAAFQNVKLLArQEGLLVGSSSGAALQGALE---IKKHINKGVIVTIFPDG 284
Cdd:PRK08638  250 IVRELVDDIVLVSEDEIRNAMKDLI-QRNKVVTEGAGALATAALLsgkLDQYIQNKKVVAIISGG 313
PRK06450 PRK06450
threonine synthase; Validated
8-135 1.62e-10

threonine synthase; Validated


Pssm-ID: 180565 [Multi-domain]  Cd Length: 338  Bit Score: 60.90  E-value: 1.62e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   8 GNTPLVLLESFsnkdvqiYAKLEQYNPGGSVKDRLGKHLIETAIRENIIQkgdvVVEASAGNTGIGVAIAANHYGVSAVI 87
Cdd:PRK06450   57 GRTPLIKKGNI-------WFKLDFLNPTGSYKDRGSVTLISYLAEKGIKQ----ISEDSSGNAGASIAAYGAAAGIEVKI 125
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1564862654  88 FAPEGFSEEKISIIKALGAEVIRTDQTlgMAGAQKAARdyelQTGAYY 135
Cdd:PRK06450  126 FVPETASGGKLKQIESYGAEVVRVRGS--REDVAKAAE----NSGYYY 167
PRK12483 PRK12483
threonine dehydratase; Reviewed
4-199 5.19e-10

threonine dehydratase; Reviewed


Pssm-ID: 237111 [Multi-domain]  Cd Length: 521  Bit Score: 59.81  E-value: 5.19e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   4 FDLIGNTPLVLLESFSNK-DVQIYAKLEQYNPGGSVKDRlGKHLIETAIRENIIQKGdvVVEASAGNTGIGVAIAANHYG 82
Cdd:PRK12483   32 YDVARETPLQRAPNLSARlGNQVLLKREDLQPVFSFKIR-GAYNKMARLPAEQLARG--VITASAGNHAQGVALAAARLG 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  83 VSAVIFAPEGFSEEKISIIKALGAEVIRTDQTL--GMAGAQKAARdyelQTGAYYLNQFEsyrNPETY--KSTIGKEITD 158
Cdd:PRK12483  109 VKAVIVMPRTTPQLKVDGVRAHGGEVVLHGESFpdALAHALKLAE----EEGLTFVPPFD---DPDVIagQGTVAMEILR 181
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1564862654 159 KLKD-IDYFVGGVGSGGTFAGVAEHLAASYRTESVI-VEPEGS 199
Cdd:PRK12483  182 QHPGpLDAIFVPVGGGGLIAGIAAYVKYVRPEIKVIgVEPDDS 224
PRK08813 PRK08813
threonine dehydratase; Provisional
10-262 6.98e-10

threonine dehydratase; Provisional


Pssm-ID: 236339 [Multi-domain]  Cd Length: 349  Bit Score: 59.25  E-value: 6.98e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  10 TPLVLLESFSnkdvqIYAKLEQYNPGGSVKDRLGKHLIETAIreniiQKGD--VVVEASAGNTGIGVAIAANHYGVSAVI 87
Cdd:PRK08813   40 TPLHYAERFG-----VWLKLENLQRTGSYKVRGALNALLAGL-----ERGDerPVICASAGNHAQGVAWSAYRLGVQAIT 109
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  88 FAPEGFSEEKISIIKALGAEVIRTDQTLGMAGAqkAARDYELQTGAYYLNQFEsyrNPETY--KSTIGKEITDKLKDIdy 165
Cdd:PRK08813  110 VMPHGAPQTKIAGVAHWGATVRQHGNSYDEAYA--FARELADQNGYRFLSAFD---DPDVIagQGTVGIELAAHAPDV-- 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 166 FVGGVGSGGTFAGVAEHLaasyRTESVIVepEGSILSGGNAHSHDIEGIGSE-------------KWPSFLPRALVS--- 229
Cdd:PRK08813  183 VIVPIGGGGLASGVALAL----KSQGVRV--VGAQVEGVDSMARAIRGDLREiapvatladgvkvKIPGFLTRRLCSsll 256
                         250       260       270
                  ....*....|....*....|....*....|....
gi 1564862654 230 -DIIKVSDDAAFQNVKLLARQEGLLVGSSSGAAL 262
Cdd:PRK08813  257 dDVVIVREAELRETLVRLALEEHVIAEGAGALAL 290
PRK06110 PRK06110
threonine dehydratase;
24-109 1.66e-09

threonine dehydratase;


Pssm-ID: 235699  Cd Length: 322  Bit Score: 57.70  E-value: 1.66e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  24 QIYAKLEQYNPGGSVKDRLGKHLIETAIRENIIQKGdvVVEASAGNTGIGVAIAANHYGVSAVIFAPEGFSEEKISIIKA 103
Cdd:PRK06110   37 EVWVKHENHTPTGAFKVRGGLVYFDRLARRGPRVRG--VISATRGNHGQSVAFAARRHGLAATIVVPHGNSVEKNAAMRA 114

                  ....*.
gi 1564862654 104 LGAEVI 109
Cdd:PRK06110  115 LGAELI 120
PRK06608 PRK06608
serine/threonine dehydratase;
10-141 2.57e-09

serine/threonine dehydratase;


Pssm-ID: 235842 [Multi-domain]  Cd Length: 338  Bit Score: 57.47  E-value: 2.57e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  10 TPLVLLESFsNKDV--QIYAKLEQYNPGGSVKDRLG-KHLIETAIRENIIQKgdvVVEASAGNTGIGVAIAANHYGVSAV 86
Cdd:PRK06608   24 TPIVHSESL-NEMLghEIFFKVESLQKTGAFKVRGVlNHLLELKEQGKLPDK---IVAYSTGNHGQAVAYASKLFGIKTR 99
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1564862654  87 IFAPEGFSEEKISIIKALGAEVIRTDQTlgmAGAQKAARDYELQtGAYYLNQFES 141
Cdd:PRK06608  100 IYLPLNTSKVKQQAALYYGGEVILTNTR---QEAEEKAKEDEEQ-GFYYIHPSDS 150
PRK09224 PRK09224
threonine ammonia-lyase IlvA;
57-238 4.29e-09

threonine ammonia-lyase IlvA;


Pssm-ID: 236417 [Multi-domain]  Cd Length: 504  Bit Score: 57.07  E-value: 4.29e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  57 QKGdvVVEASAGNTGIGVAIAANHYGVSAVIFAPEGFSEEKISIIKALGAEVIrtdqtlgMAG-----AQKAARDYELQT 131
Cdd:PRK09224   68 ARG--VITASAGNHAQGVALSAARLGIKAVIVMPVTTPDIKVDAVRAFGGEVV-------LHGdsfdeAYAHAIELAEEE 138
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 132 GAYYLNQFEsyrNPETY--KSTIGKEITDKLKD-IDY-FVgGVGSGGTFAGVAEHLAASYRTESVI-VEPEGS------- 199
Cdd:PRK09224  139 GLTFIHPFD---DPDVIagQGTIAMEILQQHPHpLDAvFV-PVGGGGLIAGVAAYIKQLRPEIKVIgVEPEDSaclkaal 214
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1564862654 200 ------------ILSGGNAhshdIEGIGSEKWPsfLPRALVSDIIKVSDDA 238
Cdd:PRK09224  215 eagervdlpqvgLFADGVA----VKRIGEETFR--LCQEYVDDVITVDTDE 259
PRK05638 PRK05638
threonine synthase; Validated
8-285 9.39e-09

threonine synthase; Validated


Pssm-ID: 235539 [Multi-domain]  Cd Length: 442  Bit Score: 55.97  E-value: 9.39e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   8 GNTPLVLLESFSNKDVQIYAKLEQYNPGGSVKDRLgkhlIETAIRENIIQKGDVVVEASAGNTGIGVAIAANHYGVSAVI 87
Cdd:PRK05638   65 GGTPLIRARISEKLGENVYIKDETRNPTGSFRDRL----ATVAVSYGLPYAANGFIVASDGNAAASVAAYSARAGKEAFV 140
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  88 FAPEGFSEEKISIIKALGAEVIRTDQTLGMAgAQKAARDYELQtGAYYLNQFESYRNPETYKsTIGKEITDKLKDIDYFV 167
Cdd:PRK05638  141 VVPRKVDKGKLIQMIAFGAKIIRYGESVDEA-IEYAEELARLN-GLYNVTPEYNIIGLEGQK-TIAFELWEEINPTHVIV 217
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 168 gGVGSGGTF------------AGVAEHLAASYRTESVIVEPEGSILSGGNAHSHDIEGIG-SEKWPsfLPRALVSDIIKV 234
Cdd:PRK05638  218 -PTGSGSYLysiykgfkelleIGVIEEIPKLIAVQTERCNPIASEILGNKTKCNETKALGlYVKNP--VMKEYVSEAIKE 294
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 235 SDDAAFQN-------VKLLARQEGLLVGSSSGAALQGALEIKK--HINKGVIVTIFPDGS 285
Cdd:PRK05638  295 SGGTAVVVneeeimaGEKLLAKEGIFAELSSAVVMPALLKLGEegYIEKGDKVVLVVTGS 354
PRK07048 PRK07048
threo-3-hydroxy-L-aspartate ammonia-lyase;
57-279 1.04e-08

threo-3-hydroxy-L-aspartate ammonia-lyase;


Pssm-ID: 235918 [Multi-domain]  Cd Length: 321  Bit Score: 55.41  E-value: 1.04e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  57 QKGDVVVEASAGNTGIGVAIAANHYGVSAVIFAPEGFSEEKISIIKALGAEVIRTDQTlgMAGAQKAARDYELQTGayyL 136
Cdd:PRK07048   70 QRRAGVVTFSSGNHAQAIALSARLLGIPATIVMPQDAPAAKVAATRGYGGEVVTYDRY--TEDREEIGRRLAEERG---L 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 137 NQFESYRNPETY--KSTIGKEITDKLKDIDYFVGGVGSGGTFAGVAehLAA---SYRTESVIVEPEG------SILSGGN 205
Cdd:PRK07048  145 TLIPPYDHPHVIagQGTAAKELFEEVGPLDALFVCLGGGGLLSGCA--LAAralSPGCKVYGVEPEAgndgqqSFRSGEI 222
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 206 AHSHDIEGI---------GSEKWPsfLPRALVSDIIKVSDDAAFQNVKLLARQEGLLV---GS-SSGAALQGALEIK-KH 271
Cdd:PRK07048  223 VHIDTPRTIadgaqtqhlGNYTFP--IIRRLVDDIVTVSDAELVDAMRFFAERMKIVVeptGClGAAAALRGKVPLKgKR 300

                  ....*...
gi 1564862654 272 InkGVIVT 279
Cdd:PRK07048  301 V--GVIIS 306
PRK07334 PRK07334
threonine dehydratase; Provisional
24-262 4.35e-08

threonine dehydratase; Provisional


Pssm-ID: 235994 [Multi-domain]  Cd Length: 403  Bit Score: 53.74  E-value: 4.35e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  24 QIYAKLEQYNPGGSVKDR--LGKHLietAIRENIIQKGdvVVEASAGNTGIGVAIAANHYGVSAVIFAPEGFSEEKISII 101
Cdd:PRK07334   39 EVWLKFENLQFTASFKERgaLNKLL---LLTEEERARG--VIAMSAGNHAQGVAYHAQRLGIPATIVMPRFTPTVKVERT 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 102 KALGAEVIRTDQTLGMAGAQkaARDYELQTGayyLNQFESYRNPETY--KSTIGKEITDKLKDIDYFVGGVGSGGTFAGV 179
Cdd:PRK07334  114 RGFGAEVVLHGETLDEARAH--ARELAEEEG---LTFVHPYDDPAVIagQGTVALEMLEDAPDLDTLVVPIGGGGLISGM 188
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 180 AEHLAASYRTESVI-VEPE----------GSILSGGnaHSHDIEGIgSEKWPSFLP----RALVSDIIKVSDDAAFQNVK 244
Cdd:PRK07334  189 ATAAKALKPDIEIIgVQTElypsmyaaikGVALPCG--GSTIAEGI-AVKQPGQLTleivRRLVDDILLVSEADIEQAVS 265
                         250       260
                  ....*....|....*....|.
gi 1564862654 245 LLARQEGLLV---GSSSGAAL 262
Cdd:PRK07334  266 LLLEIEKTVVegaGAAGLAAL 286
PRK08197 PRK08197
threonine synthase; Validated
8-267 2.21e-06

threonine synthase; Validated


Pssm-ID: 181283 [Multi-domain]  Cd Length: 394  Bit Score: 48.46  E-value: 2.21e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654   8 GNTPLVLLESFSnKDV---QIYAKLEQYNPGGSVKDRlGKHLIETAIRENIIQKgdvVVEASAGNTGIGVAIAANHYGVS 84
Cdd:PRK08197   78 GMTPLLPLPRLG-KALgigRLWVKDEGLNPTGSFKAR-GLAVGVSRAKELGVKH---LAMPTNGNAGAAWAAYAARAGIR 152
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  85 AVIFAPEGFSEEKISIIKALGAEVIRTDQTLGMAGAQ--KAARDYelqtGAYYLNQF-ESYRnPETyKSTIGKEITD--- 158
Cdd:PRK08197  153 ATIFMPADAPEITRLECALAGAELYLVDGLISDAGKIvaEAVAEY----GWFDVSTLkEPYR-IEG-KKTMGLELAEqlg 226
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 159 -KLKD-IDYFV-GGVGSGGTFAGVAEhLAA-----SYRTESVIVEPEG--SILSGGNAHSHDiegigSEKWP-----SF- 222
Cdd:PRK08197  227 wRLPDvILYPTgGGVGLIGIWKAFDE-LEAlgwigGKRPRLVAVQAEGcaPIVKAWEEGKEE-----SEFWEdahtvAFg 300
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1564862654 223 --LPRA----LVSDIIK--------VSDDAAFQNVKLLARQEGLLV---GSSSGAALQGALE 267
Cdd:PRK08197  301 irVPKAlgdfLVLDAVRetggcaiaVSDDAILAAQRELAREEGLFAcpeGAATFAAARQLRE 362
PRK13803 PRK13803
bifunctional phosphoribosylanthranilate isomerase/tryptophan synthase subunit beta; Provisional
10-301 3.50e-06

bifunctional phosphoribosylanthranilate isomerase/tryptophan synthase subunit beta; Provisional


Pssm-ID: 237513 [Multi-domain]  Cd Length: 610  Bit Score: 48.27  E-value: 3.50e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  10 TPLVLLESFSNK-DVQIYAKLEQYNPGGSVK--DRLGKHLIetAIReniIQKGDVVVEASAGNTGIGVAIAANHYGVSAV 86
Cdd:PRK13803  272 TPLTEAKRLSDIyGARIYLKREDLNHTGSHKinNALGQALL--AKR---MGKTRIIAETGAGQHGVATATACALFGLKCT 346
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654  87 IFAPE---GFSEEKISIIKALGAEVIRT---DQTLGMAgAQKAARDYELQT-GAYYLnqFESYRNPETY-------KSTI 152
Cdd:PRK13803  347 IFMGEediKRQALNVERMKLLGANVIPVlsgSKTLKDA-VNEAIRDWVASVpDTHYL--IGSAVGPHPYpemvayfQSVI 423
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 153 GKEITDKLKDI-----DYFVGGVGSGGTFAGVAEHLAASYRTESVIVEPEG------------------------SIL-- 201
Cdd:PRK13803  424 GEEAKEQLKEQtgklpDAIIACVGGGSNAIGIFYHFLDDPSVKLIGVEAGGkgvntgehaatikkgrkgvlhgsmTYLmq 503
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1564862654 202 --SGGNAHSHDIE------GIGSEKwpSFLPRALVSDIIKVSDDAAFQNVKLLARQEGLLVGSSSGAAL----QGALEIK 269
Cdd:PRK13803  504 deNGQILEPHSISagldypGIGPMH--ANLFETGRAIYTSVTDEEALDAFKLLAKLEGIIPALESSHALaylkEGRKKFK 581
                         330       340       350
                  ....*....|....*....|....*....|..
gi 1564862654 270 KhiNKGVIVTIFPDGsdrymSKQILNYKETIK 301
Cdd:PRK13803  582 K--KDIVIVNLSGRG-----DKDIPTLKEYFE 606
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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