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Conserved domains on  [gi|1466986861|gb|RGN13270|]
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sugar transferase [Segatella copri]

Protein Classification

sugar transferase( domain architecture ID 10493287)

sugar transferase catalyzes the transfer of a sugar from a donor such as UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate

EC:  2.7.8.-
Gene Ontology:  GO:0006486|GO:0016740
SCOP:  4007826

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Bac_transf pfam02397
Bacterial sugar transferase; This Pfam family represents a conserved region from a number of ...
6-190 2.07e-87

Bacterial sugar transferase; This Pfam family represents a conserved region from a number of different bacterial sugar transferases, involved in diverse biosynthesis pathways.


:

Pssm-ID: 460547 [Multi-domain]  Cd Length: 180  Bit Score: 254.59  E-value: 2.07e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861   6 KRSTDILVSVPCLVLFSPLFVIISLAIKWEDGLPIIYKQERIGLHGKPFNIYKFRSMKADAEKDGPNLLeIEGDTRLTRV 85
Cdd:pfam02397   1 KRLFDIVLSLLGLILLSPLLLLIAIAIKLLSGGPVFFRQERVGKNGKPFTIYKFRTMVVDAEKRGPLFK-LKNDPRITRV 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861  86 GKFIRTHHLDELPQLWNILKGDMSLVGPRPERKYYidQIIKHDPRYTYLYQIRPGATSYATLYNGYTDTmpKMLRRLSLD 165
Cdd:pfam02397  80 GRFLRKTSLDELPQLINVLKGDMSLVGPRPELPEF--EYELYERDQRRRLSVKPGITGLAQVNGGRSEL--SFEEKLELD 155
                         170       180
                  ....*....|....*....|....*
gi 1466986861 166 LYYLEHRSWWFDAKILFKTMMNILF 190
Cdd:pfam02397 156 LYYIENWSLWLDLKILLKTVKVVLK 180
 
Name Accession Description Interval E-value
Bac_transf pfam02397
Bacterial sugar transferase; This Pfam family represents a conserved region from a number of ...
6-190 2.07e-87

Bacterial sugar transferase; This Pfam family represents a conserved region from a number of different bacterial sugar transferases, involved in diverse biosynthesis pathways.


Pssm-ID: 460547 [Multi-domain]  Cd Length: 180  Bit Score: 254.59  E-value: 2.07e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861   6 KRSTDILVSVPCLVLFSPLFVIISLAIKWEDGLPIIYKQERIGLHGKPFNIYKFRSMKADAEKDGPNLLeIEGDTRLTRV 85
Cdd:pfam02397   1 KRLFDIVLSLLGLILLSPLLLLIAIAIKLLSGGPVFFRQERVGKNGKPFTIYKFRTMVVDAEKRGPLFK-LKNDPRITRV 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861  86 GKFIRTHHLDELPQLWNILKGDMSLVGPRPERKYYidQIIKHDPRYTYLYQIRPGATSYATLYNGYTDTmpKMLRRLSLD 165
Cdd:pfam02397  80 GRFLRKTSLDELPQLINVLKGDMSLVGPRPELPEF--EYELYERDQRRRLSVKPGITGLAQVNGGRSEL--SFEEKLELD 155
                         170       180
                  ....*....|....*....|....*
gi 1466986861 166 LYYLEHRSWWFDAKILFKTMMNILF 190
Cdd:pfam02397 156 LYYIENWSLWLDLKILLKTVKVVLK 180
WcaJ COG2148
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid) [Cell wall/membrane ...
1-192 4.04e-85

Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid) [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441751 [Multi-domain]  Cd Length: 322  Bit Score: 253.89  E-value: 4.04e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861   1 MERFVKRSTDILVSVPCLVLFSPLFVIISLAIKWEDGLPIIYKQERIGLHGKPFNIYKFRSMKADAEKDGPNLLEIEGDT 80
Cdd:COG2148   134 YQRVLKRLFDIVLALLGLILLSPLLLLIALAIKLDSGGPVFFRQERVGRNGRPFTIYKFRTMRVDAEKLLGAVFKLKNDP 213
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861  81 RLTRVGKFIRTHHLDELPQLWNILKGDMSLVGPRPERKYYIDQIikHDPRYTYLYQIRPGATSYATLYNGYTDTMPKmlr 160
Cdd:COG2148   214 RITRVGRFLRKTSLDELPQLWNVLKGDMSLVGPRPELPEEVELY--EEEEYRRRLLVKPGITGLAQVNGRNGETFEE--- 288
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1466986861 161 RLSLDLYYLEHRSWWFDAKILFKTMMNILFGK 192
Cdd:COG2148   289 RVELDLYYIENWSLWLDLKILLKTVLVVLKGK 320
EPS_sugtrans TIGR03025
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Members of this family ...
2-192 1.09e-77

exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.


Pssm-ID: 274398 [Multi-domain]  Cd Length: 445  Bit Score: 239.03  E-value: 1.09e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861   2 ERFVKRSTDILVSVPCLVLFSPLFVIISLAIKWEDGLPIIYKQERIGLHGKPFNIYKFRSMKADAEKDGPNLLEIEGDTR 81
Cdd:TIGR03025 254 NRALKRLFDIVLSLLALLLLSPLMLAIALAIKLDSPGPVFFRQERVGLNGKPFTVYKFRSMRVDAEEGGGPVQATKNDPR 333
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861  82 LTRVGKFIRTHHLDELPQLWNILKGDMSLVGPRPERKYYIDQIIKHDPRYTYLYQIRPGATSYATLyNGYTDTmPKMLRR 161
Cdd:TIGR03025 334 ITRVGRFLRRTSLDELPQLFNVLKGDMSLVGPRPERPAEVEKYEQEIPGYMLRHKVKPGITGWAQV-SGRGET-STMEER 411
                         170       180       190
                  ....*....|....*....|....*....|.
gi 1466986861 162 LSLDLYYLEHRSWWFDAKILFKTMMNILFGK 192
Cdd:TIGR03025 412 VEYDLYYIENWSLWLDLKILLKTVKVVLTGK 442
PRK10124 PRK10124
putative UDP-glucose lipid carrier transferase; Provisional
3-192 1.15e-44

putative UDP-glucose lipid carrier transferase; Provisional


Pssm-ID: 182254 [Multi-domain]  Cd Length: 463  Bit Score: 153.72  E-value: 1.15e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861   3 RFVKRSTDILVSVPCLVLFSPLFVIISLAIKWEDGLPIIYKQERIGLHGKPFNIYKFRSMKAdAEKDGPNLLEIEGDTRL 82
Cdd:PRK10124  270 RLLKRAEDIVLASLILLLISPVLCCIALAVKLSSPGPVIFRQTRYGMDGKPIKVWKFRSMKV-MENDKVVTQATQNDPRV 348
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861  83 TRVGKFIRTHHLDELPQLWNILKGDMSLVGPRPERKYYIDQIIKHDPRYTYLYQIRPGATSYATL--YNGYTDTMPKMLR 160
Cdd:PRK10124  349 TKVGNFLRRTSLDELPQFINVLTGGMSIVGPRPHAVAHNEQYRQLIEGYMLRHKVKPGITGWAQIngWRGETDTLEKMEK 428
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1466986861 161 RLSLDLYYLEHRSWWFDAKILFKTMMNILFGK 192
Cdd:PRK10124  429 RVEFDLEYIREWSVWFDIKIVFLTVFKGFVNK 460
 
Name Accession Description Interval E-value
Bac_transf pfam02397
Bacterial sugar transferase; This Pfam family represents a conserved region from a number of ...
6-190 2.07e-87

Bacterial sugar transferase; This Pfam family represents a conserved region from a number of different bacterial sugar transferases, involved in diverse biosynthesis pathways.


Pssm-ID: 460547 [Multi-domain]  Cd Length: 180  Bit Score: 254.59  E-value: 2.07e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861   6 KRSTDILVSVPCLVLFSPLFVIISLAIKWEDGLPIIYKQERIGLHGKPFNIYKFRSMKADAEKDGPNLLeIEGDTRLTRV 85
Cdd:pfam02397   1 KRLFDIVLSLLGLILLSPLLLLIAIAIKLLSGGPVFFRQERVGKNGKPFTIYKFRTMVVDAEKRGPLFK-LKNDPRITRV 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861  86 GKFIRTHHLDELPQLWNILKGDMSLVGPRPERKYYidQIIKHDPRYTYLYQIRPGATSYATLYNGYTDTmpKMLRRLSLD 165
Cdd:pfam02397  80 GRFLRKTSLDELPQLINVLKGDMSLVGPRPELPEF--EYELYERDQRRRLSVKPGITGLAQVNGGRSEL--SFEEKLELD 155
                         170       180
                  ....*....|....*....|....*
gi 1466986861 166 LYYLEHRSWWFDAKILFKTMMNILF 190
Cdd:pfam02397 156 LYYIENWSLWLDLKILLKTVKVVLK 180
WcaJ COG2148
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid) [Cell wall/membrane ...
1-192 4.04e-85

Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid) [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441751 [Multi-domain]  Cd Length: 322  Bit Score: 253.89  E-value: 4.04e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861   1 MERFVKRSTDILVSVPCLVLFSPLFVIISLAIKWEDGLPIIYKQERIGLHGKPFNIYKFRSMKADAEKDGPNLLEIEGDT 80
Cdd:COG2148   134 YQRVLKRLFDIVLALLGLILLSPLLLLIALAIKLDSGGPVFFRQERVGRNGRPFTIYKFRTMRVDAEKLLGAVFKLKNDP 213
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861  81 RLTRVGKFIRTHHLDELPQLWNILKGDMSLVGPRPERKYYIDQIikHDPRYTYLYQIRPGATSYATLYNGYTDTMPKmlr 160
Cdd:COG2148   214 RITRVGRFLRKTSLDELPQLWNVLKGDMSLVGPRPELPEEVELY--EEEEYRRRLLVKPGITGLAQVNGRNGETFEE--- 288
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1466986861 161 RLSLDLYYLEHRSWWFDAKILFKTMMNILFGK 192
Cdd:COG2148   289 RVELDLYYIENWSLWLDLKILLKTVLVVLKGK 320
EPS_sugtrans TIGR03025
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Members of this family ...
2-192 1.09e-77

exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.


Pssm-ID: 274398 [Multi-domain]  Cd Length: 445  Bit Score: 239.03  E-value: 1.09e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861   2 ERFVKRSTDILVSVPCLVLFSPLFVIISLAIKWEDGLPIIYKQERIGLHGKPFNIYKFRSMKADAEKDGPNLLEIEGDTR 81
Cdd:TIGR03025 254 NRALKRLFDIVLSLLALLLLSPLMLAIALAIKLDSPGPVFFRQERVGLNGKPFTVYKFRSMRVDAEEGGGPVQATKNDPR 333
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861  82 LTRVGKFIRTHHLDELPQLWNILKGDMSLVGPRPERKYYIDQIIKHDPRYTYLYQIRPGATSYATLyNGYTDTmPKMLRR 161
Cdd:TIGR03025 334 ITRVGRFLRRTSLDELPQLFNVLKGDMSLVGPRPERPAEVEKYEQEIPGYMLRHKVKPGITGWAQV-SGRGET-STMEER 411
                         170       180       190
                  ....*....|....*....|....*....|.
gi 1466986861 162 LSLDLYYLEHRSWWFDAKILFKTMMNILFGK 192
Cdd:TIGR03025 412 VEYDLYYIENWSLWLDLKILLKTVKVVLTGK 442
WcaJ_sugtrans TIGR03023
Undecaprenyl-phosphate glucose phosphotransferase; This family of proteins encompasses the E. ...
3-192 2.89e-69

Undecaprenyl-phosphate glucose phosphotransferase; This family of proteins encompasses the E. coli WcaJ protein involved in colanic acid biosynthesis, the Methylobacillus EpsB protein involved in methanolan biosynthesis, as well as the GumD protein involved in the biosynthesis of xanthan. All of these are closely related to the well-characterized WbaP (formerly RfbP) protein, which is the first enzyme in O-antigen biosynthesis in Salmonella typhimurium. The enzyme transfers galactose from UDP-galactose (NOTE: not glucose) to a polyprenyl carrier (utilizing the highly conserved C-terminal sugar transferase domain, pfam02397) a reaction which takes place at the cytoplasmic face of the inner membrane. The N-terminal hydrophobic domain is then believed to facilitate the "flippase" function of transferring the liposaccharide unit from the cytoplasmic face to the periplasmic face of the inner membrane. Most of these genes are found within large operons dedicated to the production of complex exopolysaccharides such as the enterobacterial O-antigen. Colanic acid biosynthesis utilizes a glucose-undecaprenyl carrier, knockout of EpsB abolishes incorporation of UDP-glucose into the lipid phase, and the C-terminal portion of GumD has been shown to be responsible for the glucosyl-1-transferase activity.


Pssm-ID: 274396 [Multi-domain]  Cd Length: 450  Bit Score: 217.45  E-value: 2.89e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861   3 RFVKRSTDILVSVPCLVLFSPLFVIISLAIKWEDGLPIIYKQERIGLHGKPFNIYKFRSMKADAEKDGPnLLEIEGDTRL 82
Cdd:TIGR03023 257 RFIKRAFDIVLALLVLLLLSPLLLLIAIAIKLTSPGPVLFRQERYGLDGRPFMVYKFRSMRVHAEGDGV-TQATRNDPRV 335
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861  83 TRVGKFIRTHHLDELPQLWNILKGDMSLVGPRPERKYYIDQIIKHDPRYTYLYQIRPGATSYATLyNGY---TDTMPKML 159
Cdd:TIGR03023 336 TRVGAFLRRTSLDELPQFFNVLKGDMSIVGPRPHAVAHNEQYRKLIPGYMLRHKVKPGITGWAQV-NGLrgeTDTLEKME 414
                         170       180       190
                  ....*....|....*....|....*....|...
gi 1466986861 160 RRLSLDLYYLEHRSWWFDAKILFKTMMNILFGK 192
Cdd:TIGR03023 415 KRVEYDLYYIENWSLWLDLKIILLTVFKGFVGK 447
EpsB_2 TIGR03013
sugar transferase, PEP-CTERM system associated; Members of this protein family belong to the ...
3-192 1.97e-68

sugar transferase, PEP-CTERM system associated; Members of this protein family belong to the family of bacterial sugar transferases (pfam02397). Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria (notable exceptions appear to include Magnetococcus sp. MC-1 and Myxococcus xanthus DK 1622 ). These genes are generally found near one or more of the PrsK, PrsR or PrsT genes that have been related to the PEP-CTERM system by phylogenetic profiling methods. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species. These proteins are homologs of the EpsB protein found in Methylobacillus sp. strain 12S, which is also associated with a PEP-CTERM system, but of a distinct type. A name which appears attached to a number of genes (by transitive annotation) in this family is "undecaprenyl-phosphate galactose phosphotransferase", which comes from relatively distant characterized enterobacterial homologs, and is considerably more specific than warranted from the currently available evidence.


Pssm-ID: 274390 [Multi-domain]  Cd Length: 442  Bit Score: 214.94  E-value: 1.97e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861   3 RFVKRSTDILVSVPCLVLFSPLFVIISLAIKWEDGLPIIYKQERIGLHGKPFNIYKFRSMKADAEKDGPnLLEIEGDTRL 82
Cdd:TIGR03013 253 RITKRSFDVVASLILLILTLPVMLFTALAIKLESGGPVLYRQERVGLNGRPFNLIKFRSMRADAEKNGA-VWAQKDDPRV 331
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861  83 TRVGKFIRTHHLDELPQLWNILKGDMSLVGPRPERKYYIDQIIKHDPRYTYLYQIRPGATSYATLYNGYTDTMPKMLRRL 162
Cdd:TIGR03013 332 TRVGRFLRKTRIDELPQIFNVLRGDMSFVGPRPERPEFVEKLSEEIPYYNERHRVKPGITGWAQIKYPYGASVADAKEKL 411
                         170       180       190
                  ....*....|....*....|....*....|
gi 1466986861 163 SLDLYYLEHRSWWFDAKILFKTMMNILFGK 192
Cdd:TIGR03013 412 RYDLYYIKNMSLLLDLIILIQTFEVVLFGK 441
WbaP_sugtrans TIGR03022
Undecaprenyl-phosphate galactose phosphotransferase, WbaP; The WbaP (formerly RfbP) protein ...
3-192 3.49e-48

Undecaprenyl-phosphate galactose phosphotransferase, WbaP; The WbaP (formerly RfbP) protein has been characterized as the first enzyme in O-antigen biosynthesis in Salmonella typhimurium. The enzyme transfers galactose from UDP-galactose to a polyprenyl carrier (utilizing the highly conserved C-terminal sugar transferase domain, pfam02397) a reaction which takes place at the cytoplasmic face of the inner membrane. The N-terminal hydrophobic domain is then believed to facilitate the "flippase" function of transferring the liposaccharide unit from the cytoplasmic face to the periplasmic face of the inner membrane. This model includes the enterobacterial enzymes, where the function is presumed to be identical to the S. typhimurium enzyme as well as a somewhat broader group which are likely to catalyze the same or highly similar reactions based on a phylogenetic tree-building analysis of the broader sugar transferase family. Most of these genes are found within large operons dedicated to the production of complex exopolysaccharides such as the enterobacterial O-antigen. The most likely heterogeneity would be in the precise nature of the sugar molecule transferred.


Pssm-ID: 274395 [Multi-domain]  Cd Length: 456  Bit Score: 162.91  E-value: 3.49e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861   3 RFVKRSTDILVSVPCLVLFSPLFVIISLAIKWEDGLPIIYKQERIGLHGKPFNIYKFRSMKADAEKDGPNLLE------- 75
Cdd:TIGR03022 256 RLIKRTLDLVLSLLALPLLLPLLLVIALLIRLDSKGPAFYKQERVGRNGKLFKCYKFRTMVMNSDQVLEELLAadpelra 335
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861  76 -------IEGDTRLTRVGKFIRTHHLDELPQLWNILKGDMSLVGPRP----ERKYYIDQIIkhdprytYLYQIRPGATSY 144
Cdd:TIGR03022 336 eweeyhkLRNDPRITRIGKFLRKTSLDELPQLWNVLKGDMSLVGPRPyltsELSRYGEALE-------LYLRVRPGITGL 408
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 1466986861 145 ATLyNGYTDTMPKmlRRLSLDLYYLEHRSWWFDAKILFKTMMNILFGK 192
Cdd:TIGR03022 409 WQV-SGRNETTYD--ERVYLDVWYIKNWSLWLDIVILAKTIKVVLRRK 453
PRK10124 PRK10124
putative UDP-glucose lipid carrier transferase; Provisional
3-192 1.15e-44

putative UDP-glucose lipid carrier transferase; Provisional


Pssm-ID: 182254 [Multi-domain]  Cd Length: 463  Bit Score: 153.72  E-value: 1.15e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861   3 RFVKRSTDILVSVPCLVLFSPLFVIISLAIKWEDGLPIIYKQERIGLHGKPFNIYKFRSMKAdAEKDGPNLLEIEGDTRL 82
Cdd:PRK10124  270 RLLKRAEDIVLASLILLLISPVLCCIALAVKLSSPGPVIFRQTRYGMDGKPIKVWKFRSMKV-MENDKVVTQATQNDPRV 348
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861  83 TRVGKFIRTHHLDELPQLWNILKGDMSLVGPRPERKYYIDQIIKHDPRYTYLYQIRPGATSYATL--YNGYTDTMPKMLR 160
Cdd:PRK10124  349 TKVGNFLRRTSLDELPQFINVLTGGMSIVGPRPHAVAHNEQYRQLIEGYMLRHKVKPGITGWAQIngWRGETDTLEKMEK 428
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1466986861 161 RLSLDLYYLEHRSWWFDAKILFKTMMNILFGK 192
Cdd:PRK10124  429 RVEFDLEYIREWSVWFDIKIVFLTVFKGFVNK 460
PRK15204 PRK15204
undecaprenyl-phosphate galactose phosphotransferase; Provisional
3-189 2.84e-34

undecaprenyl-phosphate galactose phosphotransferase; Provisional


Pssm-ID: 185126 [Multi-domain]  Cd Length: 476  Bit Score: 126.27  E-value: 2.84e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861   3 RFVKRSTDILVSVPCLVLFSPLFVIISLAIKwEDGLPIIYKQERIGLHGKPFNIYKFRSM------------------KA 64
Cdd:PRK15204  277 RFLKRTFDIVCSIMILIIASPLMIYLWYKVT-RDGGPAIYGHQRVGRHGKLFPCYKFRSMvmnsqevlkellandpiaRA 355
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466986861  65 DAEKDgpnlLEIEGDTRLTRVGKFIRTHHLDELPQLWNILKGDMSLVGPRPerkYYIDQIIKHDPRYTYLYQIRPGATSY 144
Cdd:PRK15204  356 EWEKD----FKLKNDPRITAVGRFIRKTSLDELPQLFNVLKGDMSLVGPRP---IVSDELERYCDDVDYYLMAKPGMTGL 428
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1466986861 145 ATLyNGYTDTmpKMLRRLSLDLYYLEHRSWWFDAKILFKTMMNIL 189
Cdd:PRK15204  429 WQV-SGRNDV--DYDTRVYFDSWYVKNWTLWNDIAILFKTAKVVL 470
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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