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Conserved domains on  [gi|1432622070|gb|RCP48827|]
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putative fimbrial-like adhesin protein [Escherichia coli]

Protein Classification

fimbrial-like adhesin protein( domain architecture ID 10015025)

fimbrial-like adhesin protein similar to Escherichia coli fimbrial-like protein YehA, which is part of the yehABCD fimbrial operon and may contribute to adhesion to various surfaces in specific environmental niches

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK15252 PRK15252
putative fimbrial-like adhesin protein;
1-344 0e+00

putative fimbrial-like adhesin protein;


:

Pssm-ID: 237932  Cd Length: 344  Bit Score: 553.03  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070   1 MNIRIMLFIVMMMVMPVSYAACYSELSVQHNLVVQGDFALTQTQMATYEHNFNDSSCVSTNTITPMSPSDIIVGLYNDTI 80
Cdd:PRK15252    1 MEIRIMLFIVMMMVMPVSYAACYSELSVQHNLVVQGDFALNQTQSATYEHNFNDSSCVSTNTITPMSPSDIIVGLYNDTI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070  81 KLNLHFEWTNKNNITLSNNQTSFTSGYSVTVTPAASNAKVNVSAGGGGSVMINGVATLSSASSSTRGSAAVQFLLCLLGG 160
Cdd:PRK15252   81 KLNLHFEWTNKNNITLSNNQTSFTSGYSVTVTPAASNAKVNVSAGSGGSVMINGVATLSSASSSTRGSAAVQFLLCLLGG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070 161 KSWDACVNSYRNALAQNAGVYSFNLTLSYNPITTTCKPDDLLITLDSIPVSQLPATGNKATINSKQGDIILRCKNLLGQQ 240
Cdd:PRK15252  161 KSWDACVNSYRNALAQNAGVYSFNLTLSYNPITTTCKPDDLLITLPSIPVSQLPATGNKTTINSKDGDIILRCKNLLGQQ 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070 241 NQTSRKMQVYLSSSDLLTNSNTILKGAEDNGVGFILESNGSSVTLLNITNSSKGYTNLKEIAAKSKLTDTTVSIPITASY 320
Cdd:PRK15252  241 NQTSRKMQVYLSSSDLLTNSNTILKGAENNGVGFILESNGKPVTLLNITNSSKGYTNLKEIAAKSKLTDTTVSIPITASY 320

                         330       340
                  ....*....|....*....|....
gi 1432622070 321 YVYDTNKVKSGALEATALINVKYD 344
Cdd:PRK15252  321 YVYDTNKVKSGALEATALINVKYD 344
 
Name Accession Description Interval E-value
PRK15252 PRK15252
putative fimbrial-like adhesin protein;
1-344 0e+00

putative fimbrial-like adhesin protein;


Pssm-ID: 237932  Cd Length: 344  Bit Score: 553.03  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070   1 MNIRIMLFIVMMMVMPVSYAACYSELSVQHNLVVQGDFALTQTQMATYEHNFNDSSCVSTNTITPMSPSDIIVGLYNDTI 80
Cdd:PRK15252    1 MEIRIMLFIVMMMVMPVSYAACYSELSVQHNLVVQGDFALNQTQSATYEHNFNDSSCVSTNTITPMSPSDIIVGLYNDTI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070  81 KLNLHFEWTNKNNITLSNNQTSFTSGYSVTVTPAASNAKVNVSAGGGGSVMINGVATLSSASSSTRGSAAVQFLLCLLGG 160
Cdd:PRK15252   81 KLNLHFEWTNKNNITLSNNQTSFTSGYSVTVTPAASNAKVNVSAGSGGSVMINGVATLSSASSSTRGSAAVQFLLCLLGG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070 161 KSWDACVNSYRNALAQNAGVYSFNLTLSYNPITTTCKPDDLLITLDSIPVSQLPATGNKATINSKQGDIILRCKNLLGQQ 240
Cdd:PRK15252  161 KSWDACVNSYRNALAQNAGVYSFNLTLSYNPITTTCKPDDLLITLPSIPVSQLPATGNKTTINSKDGDIILRCKNLLGQQ 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070 241 NQTSRKMQVYLSSSDLLTNSNTILKGAEDNGVGFILESNGSSVTLLNITNSSKGYTNLKEIAAKSKLTDTTVSIPITASY 320
Cdd:PRK15252  241 NQTSRKMQVYLSSSDLLTNSNTILKGAENNGVGFILESNGKPVTLLNITNSSKGYTNLKEIAAKSKLTDTTVSIPITASY 320

                         330       340
                  ....*....|....*....|....
gi 1432622070 321 YVYDTNKVKSGALEATALINVKYD 344
Cdd:PRK15252  321 YVYDTNKVKSGALEATALINVKYD 344
Fimbrial pfam00419
Fimbrial protein;
184-344 3.67e-16

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 74.78  E-value: 3.67e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070 184 NLTLSYNPITTTCKPDD---LLITLDSIPVSQLPATGnkATINSKQGDIILRCKNLLgqqnqTSRKMQVYLSSSDLLTNS 260
Cdd:pfam00419   2 NFTGTVTRVPATCKITAgtpIEVDFGQIPVNELNAGG--EGSRQKPFSITLECSSGS-----SAVKVTVGLFGTADASSP 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070 261 NTILKGAED---NGVGFILE-SNGSSVTLLNITNSSKGYTNlkeiaaksklTDTTVSIPITASYYVYDTNKVKSGALEAT 336
Cdd:pfam00419  75 NLLLTGNGAgaaTGVGIRLYdANGGALPPNNGTSSIPVSAT----------AAVATGITFTASLVATTGGTPTAGDFNAT 144


                  ....*...
gi 1432622070 337 ALINVKYD 344
Cdd:pfam00419 145 ATIVVDYQ 152
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
172-344 3.16e-03

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 38.10  E-value: 3.16e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070 172 NALAQNAGVYSFNLTLsynpITTTCK----PDDLLITLDSIPVSQLPATGNKATinSKQGDIILR-CknllgqQNQTSRK 246
Cdd:COG3539    17 AAAAAADGTVNFTGTV----VAPTCTintgSKDQTVDLGTVSTSDLNGVGSTSG--PKPFSIKLTnC------DAGTSNS 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070 247 MQVYLSSSDLLTNSNTILKGAEDN--GVGF-ILESNGSSVTLlnitNSSKGYTNLKeiaaksklTDTTVSIPITAsYYVY 323
Cdd:COG3539    85 VKVTFTGTADSANPGLLANTGSGGasGVGIqLLDSDGTPIPL----GTPSSAVTLT--------SNGSATLPFYA-RYVA 151

                         170       180
                  ....*....|....*....|.
gi 1432622070 324 DTNKVKSGALEATALINVKYD 344
Cdd:COG3539   152 TGATVTAGSFNATATFTIDYQ 172
 
Name Accession Description Interval E-value
PRK15252 PRK15252
putative fimbrial-like adhesin protein;
1-344 0e+00

putative fimbrial-like adhesin protein;


Pssm-ID: 237932  Cd Length: 344  Bit Score: 553.03  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070   1 MNIRIMLFIVMMMVMPVSYAACYSELSVQHNLVVQGDFALTQTQMATYEHNFNDSSCVSTNTITPMSPSDIIVGLYNDTI 80
Cdd:PRK15252    1 MEIRIMLFIVMMMVMPVSYAACYSELSVQHNLVVQGDFALNQTQSATYEHNFNDSSCVSTNTITPMSPSDIIVGLYNDTI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070  81 KLNLHFEWTNKNNITLSNNQTSFTSGYSVTVTPAASNAKVNVSAGGGGSVMINGVATLSSASSSTRGSAAVQFLLCLLGG 160
Cdd:PRK15252   81 KLNLHFEWTNKNNITLSNNQTSFTSGYSVTVTPAASNAKVNVSAGSGGSVMINGVATLSSASSSTRGSAAVQFLLCLLGG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070 161 KSWDACVNSYRNALAQNAGVYSFNLTLSYNPITTTCKPDDLLITLDSIPVSQLPATGNKATINSKQGDIILRCKNLLGQQ 240
Cdd:PRK15252  161 KSWDACVNSYRNALAQNAGVYSFNLTLSYNPITTTCKPDDLLITLPSIPVSQLPATGNKTTINSKDGDIILRCKNLLGQQ 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070 241 NQTSRKMQVYLSSSDLLTNSNTILKGAEDNGVGFILESNGSSVTLLNITNSSKGYTNLKEIAAKSKLTDTTVSIPITASY 320
Cdd:PRK15252  241 NQTSRKMQVYLSSSDLLTNSNTILKGAENNGVGFILESNGKPVTLLNITNSSKGYTNLKEIAAKSKLTDTTVSIPITASY 320

                         330       340
                  ....*....|....*....|....
gi 1432622070 321 YVYDTNKVKSGALEATALINVKYD 344
Cdd:PRK15252  321 YVYDTNKVKSGALEATALINVKYD 344
PRK15216 PRK15216
putative fimbrial biosynthesis regulatory protein; Provisional
 4-344 3.59e-54

putative fimbrial biosynthesis regulatory protein; Provisional


Pssm-ID: 185138  Cd Length: 340  Bit Score: 181.02  E-value: 3.59e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070   4 RIMLFIVMMMVMPVSYAACYSELSVQHNLVVQGD-FALTQTQMATYEHNFNDSSCVSTNTITPMSPSDIIVGL-YNDTIK 81
Cdd:PRK15216    3 RLLFLLMMMQFTQLGYAACNATLTNTKDYTIQSDsLMLGGEESAIITNGFTDANCSNSDVVTKLETSDHIIGMgPNDSVK 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070  82 LNLHFEWTNKNNITLSNNQTSFTSGYSVTVTPAASNAKVNVSAGGGGSVMINGVATLSSASSSTRGSAAVQFLLCLLGGK 161
Cdd:PRK15216   83 LKLKVEWQSSSAINMRNQNGVIEAPYKITISEINSLEAVTVSARGGYSVTIDNITVMSGAKNQWSSSDWVVFILRYIGCW 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070 162 SWDACVNSYRNALaQNAGVYSFNLTLSYNPITTTCKPDDLLITLDSIPVSQLPATGNKATInSKQGDIILRCKNLLGQQN 241
Cdd:PRK15216  163 GNRECVANVITDL-NGKGVYKANLTINYNRKETTCAPQNLTITLDPVPMTKLRAKGEVSEF-SKQGDIILDCKNQVRNAM 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070 242 QTSRKMQVYLSSSDLLTNSNTILKGAEDNGVGFILESngSSVTLLNItNSSKGYTNLKEIAAKSKLTDTTVSIPITASYY 321
Cdd:PRK15216  241 LTSRQIAVNLRSDLVWDENEAVLKPDNDNGVGFILRD--SNRSLLKI-NKGVAINSIFKTYAKGSAVNSVEAIPVFATYY 317

                         330       340
                  ....*....|....*....|...
gi 1432622070 322 VYDTNKVKSGALEATALINVKYD 344
Cdd:PRK15216  318 VLDPAKVKAGPLQSKALIVVSYN 340
Fimbrial pfam00419
Fimbrial protein;
184-344 3.67e-16

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 74.78  E-value: 3.67e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070 184 NLTLSYNPITTTCKPDD---LLITLDSIPVSQLPATGnkATINSKQGDIILRCKNLLgqqnqTSRKMQVYLSSSDLLTNS 260
Cdd:pfam00419   2 NFTGTVTRVPATCKITAgtpIEVDFGQIPVNELNAGG--EGSRQKPFSITLECSSGS-----SAVKVTVGLFGTADASSP 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070 261 NTILKGAED---NGVGFILE-SNGSSVTLLNITNSSKGYTNlkeiaaksklTDTTVSIPITASYYVYDTNKVKSGALEAT 336
Cdd:pfam00419  75 NLLLTGNGAgaaTGVGIRLYdANGGALPPNNGTSSIPVSAT----------AAVATGITFTASLVATTGGTPTAGDFNAT 144


                  ....*...
gi 1432622070 337 ALINVKYD 344
Cdd:pfam00419 145 ATIVVDYQ 152
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
172-344 3.16e-03

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 38.10  E-value: 3.16e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070 172 NALAQNAGVYSFNLTLsynpITTTCK----PDDLLITLDSIPVSQLPATGNKATinSKQGDIILR-CknllgqQNQTSRK 246
Cdd:COG3539    17 AAAAAADGTVNFTGTV----VAPTCTintgSKDQTVDLGTVSTSDLNGVGSTSG--PKPFSIKLTnC------DAGTSNS 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432622070 247 MQVYLSSSDLLTNSNTILKGAEDN--GVGF-ILESNGSSVTLlnitNSSKGYTNLKeiaaksklTDTTVSIPITAsYYVY 323
Cdd:COG3539    85 VKVTFTGTADSANPGLLANTGSGGasGVGIqLLDSDGTPIPL----GTPSSAVTLT--------SNGSATLPFYA-RYVA 151

                         170       180
                  ....*....|....*....|.
gi 1432622070 324 DTNKVKSGALEATALINVKYD 344
Cdd:COG3539   152 TGATVTAGSFNATATFTIDYQ 172
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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