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Conserved domains on  [gi|1432492523|gb|RCO23463|]
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hemin uptake protein HemP [Escherichia coli]

Protein Classification

hemin uptake protein HemP( domain architecture ID 10013451)

hemin uptake protein HemP is involved in the uptake of hemin

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK10183 PRK10183
hypothetical protein; Provisional
 8-63 3.85e-28

hypothetical protein; Provisional


:

Pssm-ID: 182290  Cd Length: 56  Bit Score: 94.89  E-value: 3.85e-28
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 1432492523  8 KLTPETDANHKTASPQPIRRISSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK 63
Cdd:PRK10183   1 KLTPETDANHKTASPQPIRRISSQTLLGPDGKVIIDHDGQEYLLRKTQAGKLLLTK 56
 
Name Accession Description Interval E-value
PRK10183 PRK10183
hypothetical protein; Provisional
 8-63 3.85e-28

hypothetical protein; Provisional


Pssm-ID: 182290  Cd Length: 56  Bit Score: 94.89  E-value: 3.85e-28
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 1432492523  8 KLTPETDANHKTASPQPIRRISSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK 63
Cdd:PRK10183   1 KLTPETDANHKTASPQPIRRISSQTLLGPDGKVIIDHDGQEYLLRKTQAGKLLLTK 56
HemP COG4256
Hemin uptake protein HemP [Coenzyme transport and metabolism];
4-63 6.21e-18

Hemin uptake protein HemP [Coenzyme transport and metabolism];


Pssm-ID: 443398  Cd Length: 60  Bit Score: 69.23  E-value: 6.21e-18
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432492523  4 TDSRKLTPETDANHKTASPQPIRRISSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK 63
Cdd:COG4256    1 NASAAATSTPAAAPAAAAAPAPPRIDSRELLGGGREVRIEHNGQRYRLRITRNGKLILTK 60
hemP pfam10636
Hemin uptake protein hemP; This is a bacterial family of proteins that are involved in the ...
 27-63 5.26e-13

Hemin uptake protein hemP; This is a bacterial family of proteins that are involved in the uptake of the iron source hemin.


Pssm-ID: 431409  Cd Length: 37  Bit Score: 56.34  E-value: 5.26e-13
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 1432492523 27 RISSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK 63
Cdd:pfam10636  1 RIDSRELLGGGREVLIEHGGETYRLRITRNGKLILTK 37
 
Name Accession Description Interval E-value
PRK10183 PRK10183
hypothetical protein; Provisional
 8-63 3.85e-28

hypothetical protein; Provisional


Pssm-ID: 182290  Cd Length: 56  Bit Score: 94.89  E-value: 3.85e-28
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 1432492523  8 KLTPETDANHKTASPQPIRRISSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK 63
Cdd:PRK10183   1 KLTPETDANHKTASPQPIRRISSQTLLGPDGKVIIDHDGQEYLLRKTQAGKLLLTK 56
HemP COG4256
Hemin uptake protein HemP [Coenzyme transport and metabolism];
4-63 6.21e-18

Hemin uptake protein HemP [Coenzyme transport and metabolism];


Pssm-ID: 443398  Cd Length: 60  Bit Score: 69.23  E-value: 6.21e-18
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1432492523  4 TDSRKLTPETDANHKTASPQPIRRISSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK 63
Cdd:COG4256    1 NASAAATSTPAAAPAAAAAPAPPRIDSRELLGGGREVRIEHNGQRYRLRITRNGKLILTK 60
hemP pfam10636
Hemin uptake protein hemP; This is a bacterial family of proteins that are involved in the ...
 27-63 5.26e-13

Hemin uptake protein hemP; This is a bacterial family of proteins that are involved in the uptake of the iron source hemin.


Pssm-ID: 431409  Cd Length: 37  Bit Score: 56.34  E-value: 5.26e-13
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 1432492523 27 RISSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK 63
Cdd:pfam10636  1 RIDSRELLGGGREVLIEHGGETYRLRITRNGKLILTK 37
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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