L4 22 kDa encapsidation protein [Human mastadenovirus C]
Protein Classification
splicing factor family protein( domain architecture ID 10567434)
splicing factor family protein is a DUF2890 domain-containing protein; similar to Human adenovirus protein 33K and packaging protein 2
List of domain hits
| Name | Accession | Description | Interval | E-value | ||||
| Adeno_L433K_22K | pfam11081 | Adenovirus L4-33K/L4-22K; Adenoviruses express up to 20 distinct mRNAs from five major late ... |
15-176 | 2.99e-73 | ||||
Adenovirus L4-33K/L4-22K; Adenoviruses express up to 20 distinct mRNAs from five major late transcription unit (MLTU) regions, L1 to L5. The L4 region expresses L4-33K and a related protein, L4-22K. L4-22K and L4-33K have complementary but not redundant functions that provide the normal pattern of mRNA production during the late phase of infection. L4-33K is an alternative RNA splicing factor that up-regulates several MLTU splice acceptor sites as the late phase progresses. L4-22K plays a role in genome packaging via its binding, in association with IVa2, to the A2 sequence within the packaging signal. Additionally, L4-22K plays an important role in the temporal switch from the early to late phase of infection by regulating both early and late gene expression. : Pssm-ID: 314108 Cd Length: 168 Bit Score: 218.72 E-value: 2.99e-73
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| Name | Accession | Description | Interval | E-value | ||||
| Adeno_L433K_22K | pfam11081 | Adenovirus L4-33K/L4-22K; Adenoviruses express up to 20 distinct mRNAs from five major late ... |
15-176 | 2.99e-73 | ||||
Adenovirus L4-33K/L4-22K; Adenoviruses express up to 20 distinct mRNAs from five major late transcription unit (MLTU) regions, L1 to L5. The L4 region expresses L4-33K and a related protein, L4-22K. L4-22K and L4-33K have complementary but not redundant functions that provide the normal pattern of mRNA production during the late phase of infection. L4-33K is an alternative RNA splicing factor that up-regulates several MLTU splice acceptor sites as the late phase progresses. L4-22K plays a role in genome packaging via its binding, in association with IVa2, to the A2 sequence within the packaging signal. Additionally, L4-22K plays an important role in the temporal switch from the early to late phase of infection by regulating both early and late gene expression. Pssm-ID: 314108 Cd Length: 168 Bit Score: 218.72 E-value: 2.99e-73
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| PHA03269 | PHA03269 | envelope glycoprotein C; Provisional |
46-160 | 4.82e-03 | ||||
envelope glycoprotein C; Provisional Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 37.02 E-value: 4.82e-03
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| Name | Accession | Description | Interval | E-value | ||||
| Adeno_L433K_22K | pfam11081 | Adenovirus L4-33K/L4-22K; Adenoviruses express up to 20 distinct mRNAs from five major late ... |
15-176 | 2.99e-73 | ||||
Adenovirus L4-33K/L4-22K; Adenoviruses express up to 20 distinct mRNAs from five major late transcription unit (MLTU) regions, L1 to L5. The L4 region expresses L4-33K and a related protein, L4-22K. L4-22K and L4-33K have complementary but not redundant functions that provide the normal pattern of mRNA production during the late phase of infection. L4-33K is an alternative RNA splicing factor that up-regulates several MLTU splice acceptor sites as the late phase progresses. L4-22K plays a role in genome packaging via its binding, in association with IVa2, to the A2 sequence within the packaging signal. Additionally, L4-22K plays an important role in the temporal switch from the early to late phase of infection by regulating both early and late gene expression. Pssm-ID: 314108 Cd Length: 168 Bit Score: 218.72 E-value: 2.99e-73
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| PHA03269 | PHA03269 | envelope glycoprotein C; Provisional |
46-160 | 4.82e-03 | ||||
envelope glycoprotein C; Provisional Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 37.02 E-value: 4.82e-03
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| Blast search parameters | ||||
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