|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-747 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1473.59 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 1 MEHTYQYAWIIPFVPLPVPVLIGVGLFLFPTATKNLRRMWAFQSVLLLSIVMILSIDLFIQQLNSSSIYQCIWSWIINND 80
Cdd:CHL00025 1 MEHTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINND 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 81 FSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
Cdd:CHL00025 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIFKNLISNNEVNVLFVILCAVLLFAGAVAK 240
Cdd:CHL00025 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLA 320
Cdd:CHL00025 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 321 YSTMSQLGYMMLALGMGSYRTALFHLITHAYSKALLFLGSGSVIHSMETVVGYSPDKSQNMVLMGGLTKHVPITKTAFLL 400
Cdd:CHL00025 321 YSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHFNVHFQNYSGKKSTPFYSISLWG 480
Cdd:CHL00025 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 481 KGGLKTINKglpLLSLLRINSNESASFFSKKTYKIDENVRKMTRPFITIpyFGNNNTYSYPYESDNTMLFSLLVLVLFTL 560
Cdd:CHL00025 481 KEESKKINK---LLLLLTMNNNERVSFFSKKTYKIDGNVRNMIRSFITI--FGNKKTFSYPHESDNTMLFPLLVLVLFTL 555
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 561 FVGSIGIPFNQEERDLDILSKSLTPSINLLHQNSKNYMDWYEFVKDASFSVSIASFGIFIALFLYKPVYSSLQNLDLINF 640
Cdd:CHL00025 556 FVGFIGIPFNQEGIDLDILSKWLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINS 635
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 641 FVKKiGSKRILWNKIINIIYDWSYNRGYIDAFYTTSLTGGIRGLAELTHFFDRRIIDGITNGVGVISFFVGEGIKYVGGG 720
Cdd:CHL00025 636 FVKG-GPKRIFLDKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITSFFVGEGIKYVGGG 714
|
730 740
....*....|....*....|....*..
gi 1779937220 721 RISFYLFFYLSFVSIFLLIFYFFYILI 747
Cdd:CHL00025 715 RISSYLFLYLFYVSIFLLILYFFFSFI 741
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-740 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 711.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 1 MEHTYQYAWIIPFVPLPVPVLIGVGLFLFPTATKNLRRMWAFQSVLLLSIVMILSIDLFIQQLNSSSIYQCIWSWIINND 80
Cdd:PRK07376 1 MESAYQYAWLIPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 81 FSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
Cdd:PRK07376 81 FHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIFKNLISNNEVNVLFVILCAVLLFAGAVAK 240
Cdd:PRK07376 161 LVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLA 320
Cdd:PRK07376 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 321 YSTMSQLGYMMLALGMGSYRTALFHLITHAYSKALLFLGSGSVIHSMETVVGYSPDKSQNMVLMGGLTKHVPITKTAFLL 400
Cdd:PRK07376 321 YSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLI 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHFnvhfqnysgkkstpfysislwg 480
Cdd:PRK07376 401 GCLAISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEGEF---------------------- 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 481 KGGLKTINKGLPLLSLLRINSNESASFFSKKTYKIDEnvrkmtrpfitipyfgnnntysyPYESDNTMLFSLLVLVLFTL 560
Cdd:PRK07376 459 RGNDKELQKELLAAADAPGHHEGHHEEHGEHHHHSGS-----------------------PHESPWTMTLPLVVLAVPSV 515
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 561 FVGSIGIPFNQEerdLDILSKSLTPSINLLHQnsknyMDWYEFVKDASFSVSIASFGIFIALFLYkpvysslqnldlinf 640
Cdd:PRK07376 516 LIGLLGTPWNNR---FEAFLHAPGEALEAAAH-----FEWGEFLILAGASVGIALIGITLASLMY--------------- 572
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 641 FVKKIGSKRIlwNKIINIIYDWSYNRGYIDAFYTTSLTGGIRGLAELTHFFDRRIIDGITNGVGVISFFVGEGIKYVGGG 720
Cdd:PRK07376 573 LLKKIDPAAI--AERFPPLYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTGLVTLGSGEGLKYFENG 650
|
730 740
....*....|....*....|
gi 1779937220 721 RISFYLFFYLSFVSIFLLIF 740
Cdd:PRK07376 651 RAQFYALIVFGAVLGLVIVF 670
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
5-739 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 545.90 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 5 YQYAWIIPFVPLpvpvligVGLFLFPTATKNLRRMWAFQ-SVLLLSIVMILSIDLFIQQLNSSSIYQcIWSWIINNDFSL 83
Cdd:COG1009 1 LQLLWLIPLLPL-------LGALLAGLLGRRLGRRAAGWlAALAPLAAFVLSLLLFPAVLGGEVVVE-LYTWIPVGSLGL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 84 EFGYLIDPLTSIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIG 163
Cdd:COG1009 73 DFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 164 FWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIFKNLISnnevnVLFVILCAVLLFAGAVAKSAQ 243
Cdd:COG1009 153 FWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILS-----SPLLTLILLLLLLGAFGKSAQ 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYST 323
Cdd:COG1009 228 FPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYST 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 324 MSQLGYMMLALGMGSYRTALFHLITHAYSKALLFLGSGSVIHSMETvvgyspdksQNMVLMGGLTKHVPITKTAFLLGTL 403
Cdd:COG1009 308 VSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATGT---------RDIRKMGGLRKKMPITAITFLIGAL 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 404 SLCGIPPLACFWSKDEILNDSW---LYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHFNVHfQNYSGKKSTPFYSISLWg 480
Cdd:COG1009 379 SLAGIPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPK-TPKHPHESPWLMTLPLV- 456
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 481 kgglktinkglpLLSLLrinsnesasffskktykidenvrkmtrpfitipyfgnnntysypyesdntmlfsllvlvlftl 560
Cdd:COG1009 457 ------------VLAVL--------------------------------------------------------------- 461
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 561 fvgSIGIPFNQEERDLDILSKS--LTPSINLLHQnsknymdwyEFVKDASFSVSIASFGIFIALFLYKPVYSSLQNLdli 638
Cdd:COG1009 462 ---SLVLGLLLPGLLEGLLAPAavLGGELHLAHG---------LLLNALPLLLSLLGIALGYLLYLKRPLPALAERL--- 526
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 639 nffvkkigskrilwnkiiNIIYDWSYNRGYIDAFYTTSLTGGIRGLAELThFFDRRIIDGITNGVGVISFFVGEGIKYVG 718
Cdd:COG1009 527 ------------------KPLYRLLANKWYFDELYDALFVKPVRALARFL-WFDRYVIDGIVNGLARLTLFSGRLLRRLQ 587
|
730 740
....*....|....*....|.
gi 1779937220 719 GGRISFYLFFYLSFVSIFLLI 739
Cdd:COG1009 588 TGYLQFYALTILLGVVVLLLL 608
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
7-456 |
4.24e-179 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 525.88 E-value: 4.24e-179
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 7 YAWIIPFVPLPVPVLIGVGlflfptATKNLRRMWAFQSVLLLSIVMILSIDLFIQQLNSS--SIYQCIWSWIINNDFSLE 84
Cdd:PRK06590 4 LLWLIVLLPLIGALILGLF------GRRIGEKWAHLVGTGLVGLSALLSLVVFFDFLLGGgrAFSQTLWTWISVGDFDVD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 85 FGYLIDPLTSIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGF 164
Cdd:PRK06590 78 FGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGF 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 165 WFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRdlfEIFKNLISNNEVNVLFVILCAVLLFAGAVAKSAQF 244
Cdd:PRK06590 158 WYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYD---EVFAAAPQFFGLGWSALTLICLLLFIGAMGKSAQF 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTM 324
Cdd:PRK06590 235 PLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTM 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 325 SQLGYMMLALGMGSYRTALFHLITHAYSKALLFLGSGSVIHSMetvvgyspDKSQNMVLMGGLTKHVPITKTAFLLGTLS 404
Cdd:PRK06590 315 SQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRKMGGLRKKMPVTYATFLIGTLA 386
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1779937220 405 LCGIPPLACFWSKDEILNDSWLYSPIFA-IIAWSTAGLTAFYMFRIYLLTFEG 456
Cdd:PRK06590 387 LIGIPPFAGFFSKDEILEAAFANGHINLfVAGLVGAFLTAFYSFRLIFLVFHG 439
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
44-456 |
1.78e-150 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 452.12 E-value: 1.78e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 44 SVLLLSIVMILSIDLFIQQLNSSS---IYQCIWSWIINNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMFHDQG 120
Cdd:TIGR01974 33 GIGSVGLSAALSAFVFVDFFLNGEgeaFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEG 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 121 YLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWII 200
Cdd:TIGR01974 113 YSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYF 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 201 GSFEFRDLFEIFknliSNNEVNVLFVIlcAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 280
Cdd:TIGR01974 193 GTLNFQEVFALA----PGAFFSALTLI--CLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVART 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 281 FPLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRTALFHLITHAYSKALLFLGS 360
Cdd:TIGR01974 267 SPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGA 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 361 GSVIHSMEtvvgyspdKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSW--LYSPIFAIIAWST 438
Cdd:TIGR01974 347 GSVIHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIG 418
|
410
....*....|....*...
gi 1779937220 439 AGLTAFYMFRIYLLTFEG 456
Cdd:TIGR01974 419 AFLTAFYSFRLIFMVFHG 436
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
448-692 |
9.90e-141 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 413.16 E-value: 9.90e-141
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 448 RIYLLTFEGHFNVHFQNYSGKKSTPFYSISLWGKGGLKTINKGLPLLSLLRINSNESASFFSKKTYKIDENVRKMTRPFI 527
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTLLLLTMNNNEKVSFFSKKTYRIDGNVRNMTRPFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 528 TIPYFGNNNTYSYPYESDNTMLFSLLVLVLFTLFVGSIGIPFNQEERDLDILSKSLTPSINLLHQNSKNYMDWYEFVKDA 607
Cdd:pfam01010 81 TITHFDNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNSNNSVDWYEFVTNA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 608 SFSVSIASFGIFIALFLYKPVYSSLQNLDLINFFVKKiGSKRILWNKIINIIYDWSYNRGYIDAFYTTSLTGGIRGLAEL 687
Cdd:pfam01010 161 IFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKK-GPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLAEL 239
|
....*
gi 1779937220 688 THFFD 692
Cdd:pfam01010 240 THFFD 244
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
63-459 |
1.27e-109 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 346.22 E-value: 1.27e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 63 LNSSSIYQCIWSWIINNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSS 142
Cdd:MTH00210 52 LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 143 NLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIFKNLISNNEVN 222
Cdd:MTH00210 132 NYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESLT 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 223 vlfvILCaVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLFIVIPYIMNFISLIGIITV 302
Cdd:MTH00210 212 ----IIC-LLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 303 FLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRTALFHLITHAYSKALLFLGSGSVIHSMetvvgyspDKSQNMV 382
Cdd:MTH00210 287 FFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV--------SDEQDMR 358
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1779937220 383 LMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSW-LYSPIFAI-IAWSTAGLTAFYMFRIYLLTFEGHFN 459
Cdd:MTH00210 359 KMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdKYYIAFAYwLGSFSALLTAFYSIRLIYLTFITNTN 437
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
47-454 |
1.59e-109 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 345.91 E-value: 1.59e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 47 LLSIVMILSIDLFIQ-QLNSSSIYQCIWSWIINNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMFHDQGYLRFF 125
Cdd:MTH00020 35 CLIISLSWSFLIFYEiLFNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFM 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 126 AYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEF 205
Cdd:MTH00020 115 SYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDF 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 206 RDLFeifkNLISNNEVNVLFVILcaVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLFI 285
Cdd:MTH00020 195 SSVF----NMVVSAPSSDITLIC--LFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFE 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 286 VIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRTALFHLITHAYSKALLFLGSGSVIH 365
Cdd:MTH00020 269 QAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIH 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 366 SMetvvgyspDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWL-YSPIFAI-IAWSTAGLTA 443
Cdd:MTH00020 349 AL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGqYYLIFAYwLGCFSALLTA 420
|
410
....*....|.
gi 1779937220 444 FYMFRIYLLTF 454
Cdd:MTH00020 421 FYSIRLIYLTF 431
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
26-460 |
9.63e-88 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 288.00 E-value: 9.63e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 26 LFLFPTATK-NLRRMWAFQSVLLLSIVMILSIDLFIQQLNSSSIyqCIWSWIINNDFSLEFGYLIDPLTSIMSILITTVG 104
Cdd:MTH00211 15 LLLLPLLLPlNNSKLHIKKAVKLSFFISLIPLLIFLDQGLETIL--TNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVT 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 105 ILVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRV 184
Cdd:MTH00211 93 WSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRI 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 185 GDFGLLLGILGFYWIIGSFEFRDLFeifkNLISNNEVNVLFVILcavllfaGAVAKSAQFPLHVWLPDAMEGPTPISALI 264
Cdd:MTH00211 173 GDIGLLLSMVWLLLNLNSWEISQLF----ILNLDLTLFLLGLLL-------AAMGKSAQFGFHPWLPSAMEGPTPVSALL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 265 HAATMVAAGIFLVARLFPLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRTALF 344
Cdd:MTH00211 242 HSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFL 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 345 HLITHAYSKALLFLGSGSVIHSMetvvgyspDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEIL--- 421
Cdd:MTH00211 322 HICTHAFFKAMLFMCSGSIIHGL--------NNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILesm 393
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1779937220 422 NDSWLYS--PIFAIIAwstAGLTAFYMFRIYLLTFEGHFNV 460
Cdd:MTH00211 394 NGSYLNAwaLLLTLLA---TSLTAAYSFRLIFLSLGGYPRF 431
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
50-421 |
6.14e-87 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 288.01 E-value: 6.14e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 50 IVMILSIDLFIqqlNSSSIYQCIWSWIINNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMS 129
Cdd:MTH00032 42 IALFLAYEVLI---NDAVVHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLS 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 130 LFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEF---- 205
Cdd:MTH00032 119 LFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFltfn 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 206 -----RDLFEIFKNLISNNEVNVLFVILCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 280
Cdd:MTH00032 199 ggsvgSGIMDRGYYGGGAYESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRS 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 281 FPLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM-GSYRTALFHLITHAYSKALLFLG 359
Cdd:MTH00032 279 FPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLS 358
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1779937220 360 SGSVIHSMETvvgyspdKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEIL 421
Cdd:MTH00032 359 AGSVIHSTTV-------DEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
141-440 |
1.18e-82 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 264.56 E-value: 1.18e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 141 SSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIFKNLISNNE 220
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 221 VNvlfviLCAVLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLFPLF-IVIPYIMNFISLIG 298
Cdd:pfam00361 81 LL-----LLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 299 IITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRTALFHLITHAYSKALLFLGSGSVIHSMEtvvgysp 375
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV------- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1779937220 376 dKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAG 440
Cdd:pfam00361 228 -HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
6-747 |
3.25e-81 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 271.01 E-value: 3.25e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 6 QYAWIIPFVPLpvpvlIGVGLFLfPTATKNLRRMW----AFQSVLLLSIVMILSIDLFIQQLNSSSIyQCIWSWIINNDF 81
Cdd:PRK07390 7 QTSWLIPLYGL-----IGALLSL-PWSPGIIRRTGprpaAYLNLLMTLLAFVHSLLALRAIWNQPPQ-QLSFPWLQVADL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 82 SLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLL 161
Cdd:PRK07390 80 DLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 162 IGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEifknLISNNEVNVLFVILCAVLLFAGAVAKS 241
Cdd:PRK07390 160 VGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAA----WAATANLDPLTATLLGLALIAGPTGKC 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 242 AQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLFPLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAY 321
Cdd:PRK07390 236 AQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSY 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 322 STMSQLGYMMLALGMGSYRTALFHLITHAYSKALLFLGSGSVIhsMETVvgyspdkSQNMVLMGGLTKHVPITKTAFLLG 401
Cdd:PRK07390 315 STSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSII--LTTI-------TQDLTELGGLWSRMPATTLAFLVG 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 402 TLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGhfnvhfqnysgkKSTPfysislwgk 481
Cdd:PRK07390 386 SAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVFLG------------KPQQ--------- 444
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 482 gglktinkglpllsllrinsnesasffskKTYKIDENVRKMTRPFITIPYFgnnntysypyesdntmlfsllvlvlftlf 561
Cdd:PRK07390 445 -----------------------------KTRRSPEVLWPMALPMVILAGF----------------------------- 466
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 562 vgSIGIPFnqeerdldILSKsltpsINLLhqnsknyMDWYEFVKDASFSVSIAS-FGIFIALFLYkpvysslqnldlinf 640
Cdd:PRK07390 467 --TLHLPL--------LLQQ-----WGLL-------PSWEALNLWAAPLLVASGlLGVLLGAWIY--------------- 509
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 641 fVKKIGSKRIlwNKIINIIYDWSYNRGYIDAFYTTSLTGGIRGLAELTHFFDRRIIDGITNGVGVISFFVGEGIKYVGGG 720
Cdd:PRK07390 510 -LNKAWSRPI--QLPLRFLQDLLAYDFYTDRLYRLTIVFVVALISRLTAWFDRYVVDGLVNLVGLATLFSGQGLKYSVSG 586
|
730 740
....*....|....*....|....*..
gi 1779937220 721 RISFYLFfyLSFVSIFLLIFYFFYILI 747
Cdd:PRK07390 587 QSQFYVL--TILLGVALLGALLLWSLL 611
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
47-454 |
2.58e-78 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 263.76 E-value: 2.58e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 47 LLSIVMILSIDLFIQqLNSSSIYQCIWSWIINNDFSLEFGYLIDpltsIMSILITTVGILV----LIYSDNYMFHDQGYL 122
Cdd:MTH00208 64 TLAFLSLINLLIWIL-LGCPNINISLSNWLSNTLFNFSLSFIFD----FYFILFFSVALFVtwsiIEFSHYYMSNDPNKN 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 123 RFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGfywIIGS 202
Cdd:MTH00208 139 AFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSL---SLIN 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 203 FEFRDLFEIFknLISNNEVNVLFVILCAVLLfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFP 282
Cdd:MTH00208 216 FNSWNLNEIL--SLNNSNSFLINILLFGILL--AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSP 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 283 LFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRTALFHLITHAYSKALLFLGSGS 362
Cdd:MTH00208 292 LISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGS 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 363 VIHSMetvvgyspDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEIL-----NDSWLYSPIFAIIAws 437
Cdd:MTH00208 372 IIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILeaglaSISNLLSIILALIA-- 441
|
410
....*....|....*..
gi 1779937220 438 tAGLTAFYMFRIYLLTF 454
Cdd:MTH00208 442 -TLLTAVYSFRIIFFCF 457
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
73-457 |
5.79e-77 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 259.33 E-value: 5.79e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 73 WSWIINNDFSLEFGYLIDPLtsimSILITTVGILV----LIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIY 148
Cdd:MTH00004 66 WPWIFTTTFNIPISFKLDQY----SLMFLPIALFVtwsiLEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLF 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 149 IFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFeifknliSNNEVNvlfvIL 228
Cdd:MTH00004 142 IGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLF-------SPTQTP----TL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 229 CAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLFIVIPYIMNFISLIGIITVFLGATL 308
Cdd:MTH00004 211 PLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATC 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 309 ALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRTALFHLITHAYSKALLFLGSGSVIHSMetvvgyspDKSQNMVLMGGLT 388
Cdd:MTH00004 291 ALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLQ 362
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1779937220 389 KHVPITKTAFLLGTLSLCGIPPLACFWSKD---EILNDSWLYSPIFAIIAWSTAgLTAFYMFRIYLLTFEGH 457
Cdd:MTH00004 363 KTLPITSSCLTIGNLALMGTPFLSGFYSKDtiiETLNTSYLNAWALLLTLLATS-FTAAYSLRMILLVQTGF 433
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
73-449 |
1.37e-76 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 258.30 E-value: 1.37e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 73 WSWIINNDFSLEFGYLIDpltsIMSILITTVGILV----LIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIY 148
Cdd:MTH00066 64 FHWMNIFNFNINSSFKFD----QYSIIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLF 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 149 IFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIFknliSNNEVNVLFVIL 228
Cdd:MTH00066 140 IGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLN----DNSTLPLLGLIL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 229 cavllfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLFIVIPYIMNFISLIGIITVFLGATL 308
Cdd:MTH00066 216 -------AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAAC 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 309 ALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRTALFHLITHAYSKALLFLGSGSVIHSMetvvgyspDKSQNMVLMGGLT 388
Cdd:MTH00066 289 ALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQ 360
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1779937220 389 KHVPITKTAFLLGTLSLCGIPPLACFWSKDEI---LNDSWL--YSPIFAIIAWStagLTAFYMFRI 449
Cdd:MTH00066 361 KALPITTSCLTIGSLALTGTPFLAGFFSKDAIieaMNTSNLnsWALILTLIATS---FTAVYSFRI 423
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
11-450 |
3.46e-74 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 246.98 E-value: 3.46e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 11 IPFVPLPVPVLIGVGLFLFPtatKNLRRMWAFqSVLLLSIVMILSIDLFIQQLNSSSIYQCIWSWIinndFSLEFGYLID 90
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLG---RRRRLQRAL-SLLASLALLALALALLLQVLAGGPLVYALGGWP----APFGIVLVAD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 91 PLTSIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPi 170
Cdd:COG0651 76 RLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 171 AANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIFKnlisnnEVNVLFVILCAVLLFAGAVAKSAQFPLHVWL 250
Cdd:COG0651 155 ALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLA------ELDPGLLLAAFALLLVGFGIKAALFPLHFWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 251 PDAM-EGPTPISALIHAAtMVAAGIFLVARLFPLFI---VIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQ 326
Cdd:COG0651 229 PDAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLFgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 327 LGYMMLALGMGSYR---TALFHLITHAYSKALLFLGSGSVIHSMetvvgyspdKSQNMVLMGGLTKHVPITKTAFLLGTL 403
Cdd:COG0651 308 IGYILLGLGLGTPLglaGALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIGAL 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1779937220 404 SLCGIPPLACFWSKDEILN---DSWLYSPIFAIIAwsTAGLTAFYMFRIY 450
Cdd:COG0651 379 ALAGLPPLSGFVSKWLLLQaalEAGAWLLAAVLLL--SSLLTLAYFVRIF 426
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
73-452 |
1.18e-73 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 254.07 E-value: 1.18e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 73 WSWIinNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWE 152
Cdd:PRK12647 48 YAWV--PSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWE 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 153 LVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEiFKNLISNNEvnvlFVILCAVL 232
Cdd:PRK12647 126 LTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREHP----LYLAILLL 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 233 LFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLFIVIPYIMNFISLIGIITVFLGATLALAQ 312
Cdd:PRK12647 201 VLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQ 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 313 KDIKRGLAYSTMSQLGYMMLALGMGS---YRTALFHLITHAYSKALLFLGSGSVIHSMETvvgyspdksQNMVLMGGLTK 389
Cdd:PRK12647 281 TDLKLILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHETGT---------RDITKLGGLRR 351
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1779937220 390 HVPITKTAFLLGTLSLCGIPPLACFWSKDEILnDSWLYSPIFAIIAWSTAGLTAFYMFRIYLL 452
Cdd:PRK12647 352 AMPITAAAALLAALSMAGLPPLFGFLAKELIY-EALLEAPLWSLILTVAAVLGNALMVAVAFL 413
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
114-449 |
6.35e-72 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 245.90 E-value: 6.35e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 114 YMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLllgI 193
Cdd:MTH00137 111 YMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---I 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 194 LGFYWI---IGSFEFRDLFEIFKNLisnnevNVLFVILCAVLlfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMV 270
Cdd:MTH00137 188 LAMAWMatnLNSWEIQQIFALSKDF------DLTLPLLGLIL---AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMV 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 271 AAGIFLVARLFPLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRTALFHLITHA 350
Cdd:MTH00137 259 VAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHA 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 351 YSKALLFLGSGSVIHSMetvvgyspDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEI---LNDSWL- 426
Cdd:MTH00137 339 FFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLn 410
|
330 340
....*....|....*....|....
gi 1779937220 427 -YSPIFAIIAWStagLTAFYMFRI 449
Cdd:MTH00137 411 aWALTLTLIATS---FTAVYSLRV 431
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
45-458 |
2.56e-70 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 245.99 E-value: 2.56e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 45 VLLLSIVMILSIDLFIQQLNSSSIYQCIWSWIINndFSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMFHDQGYL-R 123
Cdd:PRK12645 34 VLPVPVVLFIYFLSLIPTTMSGNTVMKTLPWIPS--LGINFTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgN 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 124 FFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSF 203
Cdd:PRK12645 112 FYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSF 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 204 EFRDLFEIfKNLISNNEvnvlFVILCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPL 283
Cdd:PRK12645 192 SIREMIAN-ADEIQNSP----LFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPI 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 284 FIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS----------------YRTALFHLI 347
Cdd:PRK12645 267 FAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAaslhyqgddskiyaaaITAAIFHLI 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 348 THAYSKALLFLGSGSVIHSMETvvgyspdksQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILN----- 422
Cdd:PRK12645 347 NHATFKGSLFMIVGIVDHETGT---------RDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFEsmlna 417
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 1779937220 423 --------DSWLYspIFAIIAWSTAGLTAFYMFRIYLLTFEGHF 458
Cdd:PRK12645 418 teanlfslDTWGV--LFPVIAWVASVFTFVYSIIFIFKTFFGKY 459
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
114-457 |
2.84e-69 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 238.60 E-value: 2.84e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 114 YMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGI 193
Cdd:MTH00108 107 YMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAM 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 194 LGFYWIIGSFEFRDLFeifknLISNNEVNV-LFVILCAvllfagAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAA 272
Cdd:MTH00108 187 AWFLLNLNSWDLQQIF-----MLNPNNSNLpLMGLLLA------ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVA 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 273 GIFLVARLFPLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRTALFHLITHAYS 352
Cdd:MTH00108 256 GVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFF 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 353 KALLFLGSGSVIHSMetvvgyspDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKD---EILNDSwlYSP 429
Cdd:MTH00108 336 KAMLFMCSGSIIHNL--------NDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDliiEAANTS--YTN 405
|
330 340 350
....*....|....*....|....*....|..
gi 1779937220 430 IFA----IIAWStagLTAFYMFRIYLLTFEGH 457
Cdd:MTH00108 406 AWAllitLIATS---LTAAYSTRIIFFALLGQ 434
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
81-458 |
1.23e-68 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 240.90 E-value: 1.23e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 81 FSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
Cdd:TIGR00940 65 LGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEifknliSNNEV-NVLFVILCAVLLFAGAVA 239
Cdd:TIGR00940 145 LISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIA------SADAIrNSPLFGTAMVLVLLGAFT 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGL 319
Cdd:TIGR00940 219 KSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGIL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 320 AYSTMSQLGYMMLALGMGS----------------YRTALFHLITHAYSKALLFLGSGSVIHSMETvvgyspdksQNMVL 383
Cdd:TIGR00940 299 AFSTISQLGLIMVLLGLGSpsyhyqgddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHETGT---------RDIRK 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 384 MGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILN-------------DSWLYspIFAIIAWSTAGLTAFYMFRIY 450
Cdd:TIGR00940 370 LGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAeaitahlvnpfdtVTLGY--LFPYVATVASVFTFVYSLRFI 447
|
....*...
gi 1779937220 451 LLTFEGHF 458
Cdd:TIGR00940 448 HGVFFGRP 455
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
85-434 |
1.66e-65 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 225.24 E-value: 1.66e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 85 FGYLIDPLTSIMSILITTVGILVLIYSDNYMF-------HDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMC 157
Cdd:PRK06525 69 FGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLC 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 158 SYLLIGFWFTrPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLfeifkNLISNNEVNVLFVILcavlLFAgA 237
Cdd:PRK06525 149 SWALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSAL-----SGLHGSLKYLVFLGI----LFA-A 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 238 VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLF----PLFIVIPYIMnfiSLIGIITVFLGATLALAQK 313
Cdd:PRK06525 218 WGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIqsmgPIPHVIGYVG---AVMAIVTLLYGFLMYLPQQ 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 314 DIKRGLAYSTMSQLGYMMLALGMGSY--RTAL----FHLITHAYSKALLFLGSGSVIHSMETvvgyspdksQNMVLMGGL 387
Cdd:PRK06525 295 DMKRLLAYSTITQLGYMFFGLSLAILgsRLALegsiAYIFNHAFAKSLFFLVAGALSYSCGT---------RLLPRLRGV 365
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1779937220 388 TKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAII 434
Cdd:PRK06525 366 LKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
83-435 |
3.21e-65 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 233.54 E-value: 3.21e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 83 LEFGYLIDPLTSIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLI 162
Cdd:PRK12648 68 LNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 163 GFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFefrDLFEIF--KNLISNNEVNVlfVILCAVLLfaGAVAK 240
Cdd:PRK12648 148 GYWHHRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSY---DLDVVLaaGDLIRAHPLYP--PALVLILL--GAFTK 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLA 320
Cdd:PRK12648 221 SAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 321 YSTMSQLGYMMLALGMGS---YRTALFHLITHAYSKALLFLGSGSVIHsmETvvgyspdKSQNMVLMGGLTKHVPITKTA 397
Cdd:PRK12648 301 YSTISHLGLITLLLGLGSplaAVAAIFHIINHATFKASLFMAAGIIDH--ET-------GTRDMRRLSGLRRLMPITATL 371
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1779937220 398 FLLGTLSLCGIPPLACFWSK----DEILNDSWLYS-----PIFAIIA 435
Cdd:PRK12648 372 AMVAAAAMAGVPLLNGFLSKemffAETLDTHLLGSldwllPVAATLA 418
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
73-417 |
7.03e-65 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 232.89 E-value: 7.03e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 73 WSWIinNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMFHDQGYL-RFFAYMSLFSTSMLGLVTSSNLIQIYIFW 151
Cdd:PRK12644 58 VPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYVFW 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 152 ELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFeifknlisNNEVNVLFVILCAV 231
Cdd:PRK12644 136 ELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELL--------ADPPTGPAVSVAVV 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 232 LLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLFIVIPYIMNFISLIGIITVFLGATLALA 311
Cdd:PRK12644 208 LILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALR 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 312 QKDIKRGLAYSTMSQLGYMMLALGMGSYRTALFHL---ITHAYSKALLFLGSGSVIHSMETvvgyspdksQNMVLMGGLT 388
Cdd:PRK12644 288 QHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHSTGT---------RDIRKLSGLG 358
|
330 340
....*....|....*....|....*....
gi 1779937220 389 KHVPITKTAFLLGTLSLCGIPPLACFWSK 417
Cdd:PRK12644 359 RRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
83-418 |
5.35e-63 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 225.09 E-value: 5.35e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 83 LEFGYLIDPLTSIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLI 162
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 163 GFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFefrDLFEIFKN--LISNNEVNVLFVILCaVLLFAGAVAK 240
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTY---DIATILQDseLIENIKGHPLFLITL-ILIFIGAAAK 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLA 320
Cdd:PRK12649 228 SAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILA 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 321 YSTMSQLGYMMLALGMGSYR-------TALFHLITHAYSKALLFLGSGSVIHSMETvvgyspdksQNMVLMGGLTKHVPI 393
Cdd:PRK12649 308 YSTISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEAAT---------RDIRKLGGLRKEMPI 378
|
330 340
....*....|....*....|....*
gi 1779937220 394 TKTAFLLGTLSLCGIPPLACFWSKD 418
Cdd:PRK12649 379 TFIVASIAALAMAGIPPLNGFLSKE 403
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
39-478 |
1.03e-60 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 214.62 E-value: 1.03e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 39 MWAFQSVLLLSIVMILSIdLFIQQLNSSSIYQCIWSWIINNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMFHD 118
Cdd:MTH00165 3 MCLISFFFLFFLSLILFF-LGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 119 QGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVGDFGLLLGIlGFYW 198
Cdd:MTH00165 82 KNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSI-AWMM 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 199 IIGSFEFRDLFEIFKNLISNNEVNVLFVIlcavllfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVA 278
Cdd:MTH00165 160 NFGSWNFIFYLDFMKNSFEMLLIGLLIML--------AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLI 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 279 RLFPLFIvIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRTALFHLITHAYSKALLFL 358
Cdd:MTH00165 232 RFNNLLF-SSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 359 GSGSVIHSMetvvgyspDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKD---EILNDSWLYSPIFAIIA 435
Cdd:MTH00165 311 CAGSIIHNM--------SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDlilEMVSMSNLNFFIFFLFF 382
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 1779937220 436 WSTaGLTAFYMFRIYLLTFEGHFNVH-FQNYSGKKSTPFYSISL 478
Cdd:MTH00165 383 FST-GLTVSYSFRLIYYSMSGDFNLKsLNNLSDESKFMLKSMIL 425
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
44-474 |
2.63e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 205.08 E-value: 2.63e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 44 SVLLLSIVMILSIDLFIQQLNSSSIyqcIWSWIINNDFSLEFGY--LIDPLTSIMSILITTVGILVLIYSDNYMFHDQGY 121
Cdd:MTH00151 8 SFLLFSYSVFLFPLLGYFGLNGISL---IFEWELLSVSSCSFSFelVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 122 LRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFvTNRVGDFGLLLGILGFYwIIG 201
Cdd:MTH00151 85 KRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDVLILLSIALLV-LLG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 202 SFefrdlfeifkNLISNNEVNvlFVILCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLF 281
Cdd:MTH00151 163 HW----------SILSMWDFK--LSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFF 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 282 PLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRTALFHLITHAYSKALLFLGSG 361
Cdd:MTH00151 231 PFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAG 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 362 SVIHSMetvvgyspDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILN---DSWLYSPIFAIIAWST 438
Cdd:MTH00151 311 SIIHSS--------SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILEsslMSPTSLLMVLLMFVGV 382
|
410 420 430
....*....|....*....|....*....|....*.
gi 1779937220 439 aGLTAFYMFRIYLLTFEGHFNVHFqnYSGKKSTPFY 474
Cdd:MTH00151 383 -GLTALYSARLSFCLVWGSMKSSS--LSSKSDEDFY 415
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
75-459 |
3.15e-57 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 208.84 E-value: 3.15e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 75 WIINNDFSLEFgyLIDPLTSIMSILITTVGILVLIYSDNYMFHDQGYL-RFFAYMSLFSTSMLGLVTSSNLIQIYIFWEL 153
Cdd:PRK12646 64 WMKTLDINLDL--RLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 154 VGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIfKNLISNNEvnvLFvILCAVLL 233
Cdd:PRK12646 142 TSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQ-ADHIKNHG---LF-IPMIFMF 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 234 FAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLFIVIPYIMNFISLIGIITVFLGATLALAQK 313
Cdd:PRK12646 217 LLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQW 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 314 DIKRGLAYSTMSQLGYMMLALGMGSYRT-----------------ALFHLITHAYSKALLFLGSGSVIHSMETvvgyspd 376
Cdd:PRK12646 297 DLKGILAYSTISQLGMIMAMVGIGGGYAqhqqdaiasiyvfvlfaALFHLMNHAIFKCALFMGVGIIDHEAGT------- 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 377 ksQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKD----------EILNDSWLYSPIFAIIAWSTAGLTAFYM 446
Cdd:PRK12646 370 --RDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEmfldaltqtgQLSQFSLISMIIIVFIGVIASIFTFTYA 447
|
410
....*....|...
gi 1779937220 447 FRIYLLTFEGHFN 459
Cdd:PRK12646 448 LYMVKEVFWGKYD 460
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
45-454 |
8.28e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 203.34 E-value: 8.28e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 45 VLLLSIVMILSIDLFIQQLNSSSIYQCIWSWIINNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMFHDQGYLRF 124
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 125 FAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPiAANACQKAFVTNRVGDFGLLLGILGFYwIIGSFE 204
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSK-SLSAGMLTALTNRVGDALLILSIAWML-MHGNWN 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 205 FrdlfeifknLISNNEVNVLFVILCAVLLfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLF 284
Cdd:MTH00209 164 I---------FYLNFNSNLGSVISVLIVL--AAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 285 IVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRTALFHLITHAYSKALLFLGSGSVI 364
Cdd:MTH00209 233 FSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNII 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 365 HSMEtvvgyspdKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILnDSWLYS--PIFAIIAWSTA-GL 441
Cdd:MTH00209 313 HSHG--------HSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL-ESMLESnmPIMTLILMFLStSL 383
|
410
....*....|...
gi 1779937220 442 TAFYMFRIYLLTF 454
Cdd:MTH00209 384 TAAYSMRLSYFSL 396
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
26-451 |
1.17e-56 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 203.46 E-value: 1.17e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 26 LFLFPTATKNLRRMWAFqsvlllsIVMILSIDLFIQQLNSSSIYQciWSWIINNDFSLEFGYLIDPLTSIMSILITTVGI 105
Cdd:MTH00207 1 LRMFKPSSIASYLLWFM-------SILMFPLSLYLMMCNKTILIE--WEIFTISSSPINFTIILDPTGTLFSSTVLFISA 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 106 LVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVG 185
Cdd:MTH00207 72 NVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 186 DFGLLLGIlGF-----YWIIGSFEFRDLfeifknlisNNevnvlFVILCAVLlfaGAVAKSAQFPLHVWLPDAMEGPTPI 260
Cdd:MTH00207 151 DVMLLLSI-GWtlnqgHWSITNMWQTDM---------NN-----YIALSIMI---AAMTKSAQMPFSSWLPAAMAAPTPV 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 261 SALIHAATMVAAGIFLVARLFPLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR 340
Cdd:MTH00207 213 SALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPK 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 341 TALFHLITHAYSKALLFLGSGSVIHSMEtvvgyspdKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEI 420
Cdd:MTH00207 293 LALFHLITHALFKALLFVCAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLI 364
|
410 420 430
....*....|....*....|....*....|....
gi 1779937220 421 LnDSWLYSP---IFAIIAWSTAGLTAFYMFRIYL 451
Cdd:MTH00207 365 L-ESSLFYPhnsLMILMIFLATALTAAYSTRFTL 397
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
18-456 |
6.71e-54 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 193.37 E-value: 6.71e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 18 VPVLIGVGLFLFPTATKNLRRMWAFqsvLLLSIVMILSIDLFIQQLNSSSIYQCI--WSWIinNDFSLEFGYLIDPLTSI 95
Cdd:COG1008 12 LPLLGALLLLLLPRRNARLARWVAL---AVSLLTLLLSLYLLAGFDPGTGGFQFVesYPWI--PSLGISYHLGVDGISLP 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 96 MSILITTVGILVLIYSDNYMFHDQGylRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW--FTRPIAAN 173
Cdd:COG1008 87 LVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIYAAI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 174 acqKAFVTNRVGDFGLLLGILGFYWIIGSFEFrDLFEIFKNLISNNEVNVLFVilcavLLFAGAVAKSAQFPLHVWLPDA 253
Cdd:COG1008 165 ---KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAQLLLFL-----AFFIAFAVKVPMFPFHTWLPDA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 254 -MEGPTPISAlIHAATMVAAGIFLVARL-FPLFiviP----YIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQL 327
Cdd:COG1008 236 hVEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF---PeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHM 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 328 GYMMLALGMG---SYRTALFHLITHAYSKALLFLGSGSVIHSMetvvgyspdKSQNMVLMGGLTKHVPITKTAFLLGTLS 404
Cdd:COG1008 312 GFVLLGIFALnplGLQGAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVLAALFLLAALA 382
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1779937220 405 LCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEG 456
Cdd:COG1008 383 SLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFG 434
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
19-456 |
1.53e-52 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 190.69 E-value: 1.53e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 19 PVLIGVGLF------LFPTATKNLRRMWAfqsVLLLSIVMILSIDLFIQQLNSSSIYQCIWSWIINN-------DFSLEF 85
Cdd:PRK08376 8 PLLIIIPLFgafsmpIVSLLGGKAREIWA---VLISFLTLIVALLVFYEVWNNGTIVYVLGAESPTLtlpfgsgGFPIRI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 86 GYLIDPLTSIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW 165
Cdd:PRK08376 85 IWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFR 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 166 FTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLfeifKNLISNNEVNVLFVILcaVLLFAGAVAKSAQFP 245
Cdd:PRK08376 165 NDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYL----AVKMSENPTVVAKIAL--ALFIAGLAMKSGAVP 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 246 LHVWLPDAM-EGPTPISALIHAATmvAAGIFLVAR-LFPLF---IVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLA 320
Cdd:PRK08376 239 VHMWLPDAYpAAPSSISAMLLVIK--QAGLYALARvLFSIYgpaINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLA 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 321 YSTMSQLGYMMLALGMG--SYRT-------------ALFHLITHAYSKALLFLGSGSVIHSMETvvgyspdksQNMVLMG 385
Cdd:PRK08376 317 YHSVSQIGYMLLGLGVGlaALGDpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETGT---------RNLNELG 387
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1779937220 386 GLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEG 456
Cdd:PRK08376 388 GLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
17-456 |
1.23e-51 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 187.87 E-value: 1.23e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 17 PVPVLIGVGLFLFPTATKNLRRMWAFQSVLLLSIVMILSIDLFIQQLNSSSIyqciwswIINN--DFSLEFG--YLIDPL 92
Cdd:PRK12667 11 ILLVLFAFLLPLLSILLKGNRKIQKIYALLVSLITLILSILLFIQVYSSNKP-------IVYLfgGWPAPIGivYEVDLL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 93 TSIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAA 172
Cdd:PRK12667 84 GALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAV 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 173 NACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIFKNLISNNEV----NVLFVILCAVLLFAGAVA-KSAQFPLH 247
Cdd:PRK12667 164 EAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGglagNPPLALGVALALALWAFTiKAAIFPNH 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 248 VWLPDAM-EGPTPISALIhAATMVAAGIFLVAR-LFPLFIVIPYIMNFISLIGIITVFL-------GATLALAQKDIKRG 318
Cdd:PRK12667 244 FWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRfLYTIFGISPSLIDFRAALSPILIILgavsaiiGALMMVVQKDVKRL 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 319 LAYSTMSQLGYMMLALGMGS---YRTALFHLITHAYSKALLFLGSGSVIHSMetvvgyspdKSQNMVLMGGLTKHVPITK 395
Cdd:PRK12667 323 LAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAGLGRKMPIAS 393
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1779937220 396 TAFLLGTLSLCGIPPLACFWSKdEILNDSWLYS--PIFAIIAWSTAGLTAFYMFRIYLLTFEG 456
Cdd:PRK12667 394 FAFLIGALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
15-449 |
1.31e-51 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 187.01 E-value: 1.31e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 15 PLPVPV-LIGVGLFLFPTATKNLRRMWAFqSVLLLSIVMILSidLFIQQLNSSSIYQCIWSWIINndFSLEFGylIDPLT 93
Cdd:PRK08375 7 PLLVAVpLLAAALIVLLPKRRRLRWALAL-LVAALTFALAIS--LLPQVLDGGVIAYVVGGWPPG--IGIELR--ADSLS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 94 SIMSILITTVGILVLIYSDNYMFHDQGylRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPiAAN 173
Cdd:PRK08375 80 ALFLLVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR-ALA 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 174 ACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIFknlisnNEVNVLFVILcAVLLFAGAVaKSAQFPLHVWLPDA 253
Cdd:PRK08375 157 AARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGAL------AENPTVVTAF-GFVLLALAL-KAAVFPLHTWLPRA 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 254 MEGPTPISALIHAATMVAAGIFLVARLF-----PLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLG 328
Cdd:PRK08375 229 YPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 329 YMMLALGMGSYRT---ALFHLITHAYSKALLFLGSGSVihsmetVVGYspdKSQNMVLMGGLTKHVPITKTAFLLGTLSL 405
Cdd:PRK08375 309 YILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAI------EVTY---GTRRLSELSGLGRRMPLTAAAFAVASLSL 379
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1779937220 406 CGIPPLACFWSKDEIL---NDSWLYSPIFAIIAWSTagLTAFYMFRI 449
Cdd:PRK08375 380 IGVPPTSGFVSKWYLVvgaVEAGQWLVLAVLLASSL--LALLYFLRI 424
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
16-447 |
2.40e-49 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 187.17 E-value: 2.40e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 16 LPVPVLIGVGLFLFPTATKNLRRMWAFQSVLLLSIVMILSIDLFIQQLNSSSIYQCIwSWI---INNDFSLEFGYLIDPL 92
Cdd:PRK12650 2 LAVLALAALAVVLAPPLVRVLDRKAGWPLAAIFVAAAGLLLKELPPILDGDALTWSV-TWIpdlLGNGVDVNLALRADAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 93 TSIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFwfTRPIAA 172
Cdd:PRK12650 81 SLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR--SGSGGE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 173 NACQKAFVTNRVGDFGLLLGILGFYWIIGSfefRDLFEIFKNLISNNEVNVLFVIlcAVLLFAGAVAKSAQFPLHVWLPD 252
Cdd:PRK12650 159 AGSIRTLILTFFGGLTLLAAVAIAATQTGT---TSLSGILHSDVWAEKPGLTTVV--AVLIAVAAFTKSAQFPFHFWLPE 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 253 AMEGPTPISALIHAATMVAAGIFLVARLFPLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMML 332
Cdd:PRK12650 234 AMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVA 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 333 ALGMGS---YRTALFHLITHAYSKALLFLGSGSVIHSMETvvgyspdksQNMVLMGGLTKHVPITKTAFLLGTLSLCGIP 409
Cdd:PRK12650 314 TIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDHQAGT---------RDIRRLGSLWRRMPFTFVSVTIAALSMAAVP 384
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1779937220 410 PLACFWSKDEILnDSWLYSPIFAIIAW---STAGLTAFYMF 447
Cdd:PRK12650 385 PLFGFVSKEGML-TAFLEAPGGNAGVVlllVGAALGAVFTF 424
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
45-449 |
1.68e-42 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 161.05 E-value: 1.68e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 45 VLLLSIVMILSIDLFIQQLNSSSIYQC---------IWSWIINNDFSLE-FG--YLIDPLTSIMSILITTVGILVLIYSD 112
Cdd:COG1007 12 ILLLGALVLLLLDLFLPRRSRRLLAGLallglllalALLLLALGGGTGTaFGgmFVVDGFALFFKLLILLAALLVLLLSR 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 113 NYMFHDQGYLRFFAYMSLFSTS-MLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTnrvGDFG--- 188
Cdd:COG1007 92 DYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLL---GALSsgf 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 189 LLLGILGFYWIIGSFEFRDLFEIfknlISNNEVNVLFVILCAVLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIHAA 267
Cdd:COG1007 169 LLYGISLLYGATGSLNLAGIAAA----LAAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGaPTPVTAFLATA 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 268 TMVAAgIFLVARLF--PLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRTA 342
Cdd:COG1007 245 PKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTplgVSAA 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 343 LFHLITHAYSKALLFLgsgsVIhsmeTVVGYSPDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILN 422
Cdd:COG1007 324 LFYLLAYLFMNLGAFA----VI----LLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFS 395
|
410 420 430
....*....|....*....|....*....|
gi 1779937220 423 DSW---LYspIFAIIAWSTAGLTAFYMFRI 449
Cdd:COG1007 396 AAVeagLY--WLAVIAVLNSVISAYYYLRV 423
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
45-449 |
7.97e-40 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 153.44 E-value: 7.97e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 45 VLLLSIVMILSIDLFIQQLNSSSIYQ---------CIWSWIINNDFSLEFG--YLIDPLTSIMSILITTVGILVLIYSDN 113
Cdd:PRK05777 16 ILLGAAVVLLLIDAFVRRHSRRATLAvlalllalvALLFVLGAAGGGTAFGgmLVVDGFALFLKGLILLASLLALLLARP 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 114 YMfHDQGYLRFFAYMsLFST-SMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVtnrVGDFG---L 189
Cdd:PRK05777 96 YL-EDRGRGEFYLLV-LFALlGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFV---LGALAsgfL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 190 LLGILGFYWIIGSFEFRDlfeIFKNLISNNEVNVLFVILCaVLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIHAAT 268
Cdd:PRK05777 171 LYGMSLLYGATGSLSFAG---IAKALADGSGNSLLLLFGL-VFLLVGLAFKLSAVPFHMWTPDVYEGaPTPVTAFLATAP 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 269 MVAAgIFLVARLFPLFI--VIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRTAL 343
Cdd:PRK05777 247 KIAA-FAVLLRLLVVAFggLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTaegYSAVL 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 344 FHLITHAYSKallfLGSGSVIHSMETVVGYSPDKSQnmvlMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEIL-- 421
Cdd:PRK05777 326 FYLLAYLFMT----LGAFGVISLLRRKGGEAESISD----FAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFea 397
|
410 420 430
....*....|....*....|....*....|..
gi 1779937220 422 ----NDSWLyspifAIIAWSTAGLTAFYMFRI 449
Cdd:PRK05777 398 aveaGLWWL-----AVIGVLNSAIGAFYYLRV 424
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
89-456 |
1.99e-39 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 155.05 E-value: 1.99e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 89 IDPLTSIMSILITTVGILVLIYSDNYM--FHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 166
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFreYEGKGPGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANH 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 167 TRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDlfeifknlISNNEVNVLFVILCAVLLFAGAVAKSAQFPL 246
Cdd:PRK06521 158 REAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAA--------MRAAHLSPFWASLVFLLALFGFGAKAGLVPL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 247 HVWLPDAM-EGPTPISALIhAATMVAAGIFLVAR-LFPLFIVIPYIMNFISL-IGIITVFLGATLALAQKDIKRGLAYST 323
Cdd:PRK06521 230 HVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRvVFDLLGAPGWWWGVLVLaLGAISAVLGVLYALAEHDLKRLLAYST 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 324 MSQLGYMMLALGMG--------------SYRTALFHLITHAYSKALLFLGSGSVIHSMETvvgyspdksQNMVLMGGLTK 389
Cdd:PRK06521 309 IENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATGT---------RDMEKLGGLIR 379
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1779937220 390 HVPITKTAFLLGTLSLCGIPPLACFWSKDEIL--------NDSWLYS---PIFAIIAWSTAGLTAFYMFRIYLLTFEG 456
Cdd:PRK06521 380 RMPWTAWAFLIGCLAISALPPLNGFVSEWLLLqsllsspgLPQWGLKlavPIAAAMLALTAALAAMCFVKFYGITFLG 457
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
10-364 |
1.41e-37 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 147.54 E-value: 1.41e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 10 IIPFVPLPVPVLIGVGLFLFPTATKNLRRMWAFQSVLLLSIVMILSIDLFIQQLNSSSiyqciwSWIINndfslefgyli 89
Cdd:PRK08168 5 VCALLPAVLMSLAAGGLLLSRWLTRALWRIAQAASLAGLFLALLGLVLFATGAAWPAA------AWLEV----------- 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 90 DPLTSIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRP 169
Cdd:PRK08168 68 SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 170 IAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIFKNLISNNEVNVlfvilCAVLLFAGAVAKSAQFPLHVW 249
Cdd:PRK08168 148 FARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHLAAQGASPSLQA-----AALLLVLAVILKTAQLPVHGW 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 250 LPDAMEGPTPISALIHAAtMVAAGIFLVARLFPLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGY 329
Cdd:PRK08168 223 LIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGF 301
|
330 340 350
....*....|....*....|....*....|....*
gi 1779937220 330 MMLALGMGSYRTALFHLITHAYSKALLFLGSGSVI 364
Cdd:PRK08168 302 MLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
74-417 |
4.35e-37 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 147.45 E-value: 4.35e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 74 SWIINNDFSLEFGYLIdpLTSIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLfsTSMLGLVTSSNLIQIYIFWEL 153
Cdd:PRK08668 54 LTLFFGGFKLTFTLTH--LSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVLGVFLANDLLTLYIFWEI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 154 VGMCSYLLIgfWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIFKNLISNNevnvlFVILCAVLL 233
Cdd:PRK08668 130 MTFSSFMMV--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLINDTSTG-----FALIVFLFL 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 234 FAGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLV------ARLFPLFIV---IPYIMNFISLIGIIT 301
Cdd:PRK08668 203 LAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVlyvlpgTKLFSEFGTyrgVPLFNYILAWLGNIS 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 302 VFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRTALFHLITHAYSKALLFLGSGSVIHSMETvvgyspdks 378
Cdd:PRK08668 283 IIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGT--------- 353
|
330 340 350
....*....|....*....|....*....|....*....
gi 1779937220 379 QNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSK 417
Cdd:PRK08668 354 TKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
18-456 |
3.33e-36 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 143.03 E-value: 3.33e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 18 VPVLIGVGLFLFPTATKNLRRMWAfqsVLLLSIVMILSIDLFIQQLNSSSIYQCIWS--WIINNDFSLEFGylIDPLTSI 95
Cdd:PRK05846 12 LPLIGGLLVLLTERFGARLARWIA---LIGTLLTLLLSLVLWIGFDSSNAGFQFVEKhpWIPRFGISYHLG--VDGISLL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 96 MSILITTVGILVLIYSdnyMFHDQGYLRFFAYMSLF-STSMLGLVTSSNLIQIYIFWE--LVGMcsYLLIGFW--FTRPI 170
Cdd:PRK05846 87 LVVLTALLTPLAVLAS---WEEIKKRVKFYMAALLWlEGGVIGVFAALDLLLFYVFFEamLIPM--YFLIGVWggKNRIY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 171 AANacqKAFVTNRVGDFGLLLGILGFYWI----IGSFEFRDLFeifKNLISNNEVNVLFVilcaVLLFAGAVaKSAQFPL 246
Cdd:PRK05846 162 AAT---KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLL---NLPLPPGVQYWLFL----AFFIAFAV-KMPMFPL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 247 HVWLPDAMEGPTPISALIHAATMVAAGIF-LVARLFPLFIVIP-YIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTM 324
Cdd:PRK05846 231 HTWLPDAHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDAShEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSI 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 325 SQLGYMMLALGMGS---YRTALFHLITHAYSKALLFLGSGSVIHSMETvvgyspdksQNMVLMGGLTKHVPITKTAFLLG 401
Cdd:PRK05846 311 SHMGFVTLGIFAGNqlgIQGAIFQMISHGLSSAALFLLVGVLYDRLHT---------RDIADYGGLAKVMPVLAAFFLFF 381
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 1779937220 402 TLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEG 456
Cdd:PRK05846 382 AMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFG 436
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
21-456 |
1.17e-35 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 141.23 E-value: 1.17e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 21 LIGVGLFLFPTATKNLRRMWAFQSVLLLsiVMILSIDLFIQQLNSSSIYQCIWSWIINNDFSLEFGYLIDPLTSIMSILI 100
Cdd:TIGR01972 9 LIGALLILLLPSNKDGKARWIALVVALA--TLLLSLLLLFQFDPTGSGFQFTEDIPWIPALGISYHLGVDGISLLLVLLT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 101 TTVGILVLIYSDNYMFHDQGYlrFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWfTRPIAANACQKAFV 180
Cdd:TIGR01972 87 ALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYAAMKFFL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 181 TNRVGDFGLLLGILGFYWIIG-SFEFRDLFEifKNLISNNEVnvlfvILCAVLLFAGAVaKSAQFPLHVWLPDAM-EGPT 258
Cdd:TIGR01972 164 YTLAGSLLMLLAILGLYFLGGgTFDLLELLN--LPLPFGVQT-----WLFLAFFIAFAV-KVPLFPLHTWLPDAHvEAPT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 259 PISALIHAATMVAAGIFLVARLFPLFiviP----YIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLAL 334
Cdd:TIGR01972 236 AGSVILAGVLLKMGTYGFLRFNLPLF---PdaslYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGI 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 335 GMG---SYRTALFHLITHAYSKALLFLGSGSVihsmetvvgYSPDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPL 411
Cdd:TIGR01972 313 FSFnelGISGAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGT 383
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1779937220 412 ACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEG 456
Cdd:TIGR01972 384 SGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFG 428
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
75-473 |
2.03e-35 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 140.72 E-value: 2.03e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 75 WIINNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMFHD--QGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWE 152
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 153 LVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDlfeifKNLISNNEVNVLFvilcavL 232
Cdd:PRK06589 147 LLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVS-----GGLFSKNQSIILL------L 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 233 LFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLFIVIPYIM------NFISLIGIITVFLGA 306
Cdd:PRK06589 216 MFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQrifaefNWLIFIPIVSIFYSS 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 307 TLALAQKDIKRGLAYSTMSQLGYMMLALGM---GSYRTALFHLITHAYSKALLFLGSGSVihsmetvvgYSPDKSQNMVL 383
Cdd:PRK06589 296 LKALKTDNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDK 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 384 MGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEIL-----NDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHF 458
Cdd:PRK06589 367 LHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKILSSIYKPSL 446
|
410
....*....|....*
gi 1779937220 459 NvhfQNYSGKKSTPF 473
Cdd:PRK06589 447 S---ENSFITKSLPY 458
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
7-416 |
1.37e-33 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 135.44 E-value: 1.37e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 7 YAWIIPFVPLpVPVLIGVGLFLFPtatknLRRMWAFQSVLLLSIVMILSIDLFIQQLNSSSIyqciwswiinndFSLEFG 86
Cdd:PRK06458 3 YSILFALLLL-IPLLASLLLFALR-----KRRLVATLNVLGITLTLILALWLVFTVPDAGEI------------FAAGLW 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 87 YLIDPLTSIMSILITTVGILVLIYSDNYMFHDQ-------GYLRFFAYM-SLFSTSMLGLVTSSNLIQIYIFWELVGMCS 158
Cdd:PRK06458 65 FFIDDLNVFFLALIGVVGFLTSLYSIGYMRHEVehgelspVTLRLYYGMyQLFLFTMLLALTSNNLGLMWVAIEATTLSS 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 159 YLLIGFWFTRPiAANACQKAFVTNRVGD----FGLLLGILGFYWIIGSfefRDLFEIFKNLIS-NNEVNVLFVILCAVLL 233
Cdd:PRK06458 145 ALLVGIYRTRA-SLEAAWKYIIICSVGVafalFGTILVYANAATVMGD---GEMAILWTELLKhASLLDPTLMKLAFVFL 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 234 FAGAVAKSAQFPLHVWLPDA-MEGPTPISAL------------IHAATMVAAGIFLVARLFPLFIVIpyimnfisliGII 300
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAhSEAPSPVSALlsgvllnvalyaVLRYYILIDAAIGSDFPGRLLLIF----------GLL 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 301 TVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRTALFHLITHAYSKALLFLGSGSVIHSMETvvgyspdk 377
Cdd:PRK06458 291 SVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKYGT-------- 362
|
410 420 430
....*....|....*....|....*....|....*....
gi 1779937220 378 sQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWS 416
Cdd:PRK06458 363 -RDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFIS 400
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
20-417 |
2.92e-33 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 136.40 E-value: 2.92e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 20 VLIGVGLFLFPTATK---NLRRMWAFQSVL-LLSIVMILSIDLFIQQLNSSSIYQCIWSWIINNDFSLEfgylIDPLTSI 95
Cdd:PRK08667 6 FLGAILLLLAAAVIPlvfRHKRKRVWQSVLwLVIAIALLLFAGSLQLFTGNPLDIPLWGIAPGLDITFH----IDRLAAF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 96 MSILITTVGILVLIYSDNYMFHDQGYLR---FFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAA 172
Cdd:PRK08667 82 FIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 173 NACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFrdlfeifknliSNNEVNVLFVILCAVLLFAGAVAKSAQFPLHVWLPD 252
Cdd:PRK08667 162 RAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFEL-----------SPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 253 AMEG-PTPISALIhAATMVAAGIFLVARlFPLFIVIPYIM--NFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGY 329
Cdd:PRK08667 231 AHPAsPSNVSALM-SGVMLKVAVYGLVR-FLMDVLSPELWwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGI 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 330 MMLALG--------------MGSYRTALFHLITHAYSKALLFLGSGSVIHSMETvvgyspdksQNMVLMGGLTKHVPITK 395
Cdd:PRK08667 309 ILMGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHATGT---------RNIEKMGGLVKLMPYTS 379
|
410 420
....*....|....*....|..
gi 1779937220 396 TAFLLGTLSLCGIPPLACFWSK 417
Cdd:PRK08667 380 ALFLVGAVSIAALPPFNGFASE 401
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
81-468 |
2.93e-33 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 135.04 E-value: 2.93e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 81 FSLEFGYLIDPLtsIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
Cdd:MTH00095 37 LSLKFNFYFNSL--LFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 161 LIGFWFTrpiaANACQKA---FVTNRVGDFGLLLGILGFYWIIGSFEfrdLFEIFKNLISnnevnvlfvilcaVLLFAGA 237
Cdd:MTH00095 115 LVLFYNN----WDSNSGAmntALTNRIGDFFIFLFFSGFIFSSYYFF---SFSFFSSSMI-------------LMLLLTS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 238 VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlFPLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKR 317
Cdd:MTH00095 175 FTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMN-FSYLILNMNVMKIMLLIGLFTMFFSSLSALVEEDMKK 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 318 GLAYSTMSQLGYMMLALGMGSYRTALFHLITHAYSKALLFLGSGSVIHSMETvvgyspdkSQNMVLMGGLTKHVPITKTA 397
Cdd:MTH00095 254 VVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFG--------QQDGRNYSNNGNLPMFIQLQ 325
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1779937220 398 FLLGTLSLCGIPPLACFWSKDEILNDSWL--YSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHFNVHFQNYSGK 468
Cdd:MTH00095 326 LLVTLFCLCGLMFTSGMVSKELILELFFFnnYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNVYSSSV 398
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
19-456 |
5.44e-31 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 127.38 E-value: 5.44e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 19 PVLIGVGLFLFPTATKNLRRMWAFQSVLLLSIVMILSIDLFIQQLNSssiyqciwswiinndfsLEFGYLIDPLTSIMSI 98
Cdd:PRK07234 12 PFLLGFAIYLLPKLDRNLALGMAIVSAVYALGLVASMVPLELTLLDN-----------------FGVTLRADALSGYFIL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 99 LITTVGILVLIYSdnymFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKA 178
Cdd:PRK07234 75 TNALVTLAVIFYC----WESAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 179 FVTNRVGDFgLLLGILGFYWIIGSFEFRDLFEIFKNLISnnevnvlfvilcavLLFAGAVAKSAQFPLHVWLPDAMEGPT 258
Cdd:PRK07234 151 FYSNVAMLF-YLIGAVLVYQANGTFAFSGLATADPEAFA--------------LIALGLLVKGGIFVSGLWLPLTHSEAE 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 259 PISALIHAATMVAAGIFLVARLFPLFIVIPYImnfISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGs 338
Cdd:PRK07234 216 PPVSALLSGVVVKAGVFPLVRCALDVPGLDLI---VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG- 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 339 yrtALFHLiTHAYSKALLFLGSGsVIHSMETVVgyspDKSQnmvlMGGLTKHVPITktaflLGTLSLCGIPPLACFWSKD 418
Cdd:PRK07234 292 ---GLYAL-AHGLVKSTLFLCAG-ALPSRNFTE----LISQ----MLGIGKWIPLT-----MASFSIAGFPLLAGFVSKV 353
|
410 420 430
....*....|....*....|....*....|....*...
gi 1779937220 419 EILndsWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEG 456
Cdd:PRK07234 354 LTL---KNLLPWQAIALNLAAVGTAASFWKFIFLPFSA 388
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
89-421 |
5.99e-30 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 124.49 E-value: 5.99e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 89 IDPLTSIMSILITTVGILVLIYSDNYMFHD--QGYLRFFAYMSLFSTsmlGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 166
Cdd:PRK08377 76 IGPFAALFVLIIAIVSFIMSIFSLKAVEVEpiDKYAMLFLLLMLGAT---GMIATGDIFNLFVFMEITAITAYALTAYNK 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 167 TRPiAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIfknlisNNEVNVLFVILCAVLLFAGAVAKSAQFPL 246
Cdd:PRK08377 153 TGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQL------AGTIDPTVAQVGLALLIFGLAVEAELFPL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 247 HVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLFPLFIVIPYIMNFISLI---GIITVFLGATLALAQKDIKRGLAYS 322
Cdd:PRK08377 226 NAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSVLKLViimATLTVFFAELSALRQKNVKRMIAYS 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 323 TMSQLGYMMLALGMGS---YRTALFHLITHAYSKALLFLGSGSVIHSMetvvgyspdKSQNMVLMGGLTKHVPITKTAFL 399
Cdd:PRK08377 305 SIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALALT 375
|
330 340
....*....|....*....|..
gi 1779937220 400 LGTLSLCGIPPLACFWSKDEIL 421
Cdd:PRK08377 376 IGALSTVGIPLFNVFWSKFRII 397
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
10-449 |
6.18e-29 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 120.82 E-value: 6.18e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 10 IIPFVPLPVPVLIGVGLFLFPTATKNLRRMwAFQSVLLLSIVMILSIDLFIQQLNSSSIYQCIWSWIINNDFSLefgyli 89
Cdd:TIGR01770 1 LIAILPEIILLLGAFILLLYGLFYSRKKRN-PLLLKNLSYIVLLSALVSLFLTLQYAAYLFTGFSFFIVDNFAL------ 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 90 dpltSIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRP 169
Cdd:TIGR01770 74 ----LIKLILLLSTLLTFFFALSYLSKEKINKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSR 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 170 IAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIFknliSNNEVNVLFVILCAVLLFAGAVAKSAQFPLHVW 249
Cdd:TIGR01770 150 FSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFL----SNGMLNISLLLLGIVLILVGLLFKLSAVPFHMW 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 250 LPDAMEG-PTPISALIHAATMVAAGIFLVaRLFPLFIV--IPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQ 326
Cdd:TIGR01770 226 VPDVYEGaPTPVTAFFSIVPKIAIFAVFL-RLFLYILFgfSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISH 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 327 LGYMMLALGMGS---YRTALFHLITHAYSKALLFlgsgSVIHSMETvvgYSPDKSQNMVLMGGLTKHVPITKTAFLLGTL 403
Cdd:TIGR01770 305 VGYILIGLLAGTlegIKAVLFYIFIYALMSLGAF----GVLSLLRS---YKDEWIEYISDFAGLFKTNPILAILILIFMF 377
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1779937220 404 SLCGIPPLACFWSKDEIL-----NDSWLYSPIFAIiawsTAGLTAFYMFRI 449
Cdd:TIGR01770 378 SLAGIPPLAGFFGKFYVFfallkSGLYWLAVIAVL----TSVIGAFYYLRV 424
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
80-417 |
7.73e-27 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 115.76 E-value: 7.73e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 80 DFSLEFgYLIDPLTSIMSILITTVGILVLIYSdnymFHDQGYLRFFAYMSLFSTSmLGLVTSSNLIQIYIFWELVGMCSY 159
Cdd:PRK12668 57 GFDLVL-GRVDKLSRVFGLIFGIMAFIGVIYA----LHVKDPGQHVAALLYVGSA-LGAVFAGDLLTLFVFWELMAFTST 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 160 LLIgfWFTR-PIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFrDLFEIFKNLisnnevnvlfvilCAVLLFAGAV 238
Cdd:PRK12668 131 FLV--WARGtKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLGGT-------------AAWLILIGFG 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 239 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLFIVIPYImnfisliGIITVFLGATLALAQKDIKRG 318
Cdd:PRK12668 195 VNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELLIYI-------GAAMAVYGVFFALLENDLRRL 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 319 LAYSTMSQLGYMMLALGMGSYRT---ALFHLITHAYSKALLFLGSGSVIHsmetVVGYSpdksqNMVLMGGLTKHVPITK 395
Cdd:PRK12668 268 LSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLY----RTGTE-----KLTELGGLYRSMPLTA 338
|
330 340
....*....|....*....|..
gi 1779937220 396 TAFLLGTLSLCGIPPLACFWSK 417
Cdd:PRK12668 339 LFCLVGALSISAFPLFSGFVSK 360
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-456 |
1.13e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 114.66 E-value: 1.13e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 14 VPLPVPVLIGVGLFLFPTATKNLRrmwaFQSVLLLSIVMILSIDLFIQQLNSSSIYQCIWSWiiNNDFSLEFgyLIDPLT 93
Cdd:PRK07691 8 LPILIPVITAILLIFLGKRPIIQR----YVALIGSLLTLVAAIILVANVYKHGIQTLELGNW--KAPFGIVF--VADMFA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 94 SIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRpIAAN 173
Cdd:PRK07691 80 ALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQLR 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 174 ACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIFKNLISNNE--VNVLFVILCAVllFAgavAKSAQFPLHVWLP 251
Cdd:PRK07691 159 ESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTglITVVAILFLFV--FA---TKAGLFPLYFWLP 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 252 DAMEGP-TPISALIhAATMVAAGIFLVARLFPLFIV--IPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLG 328
Cdd:PRK07691 234 GSYYAPpIAIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 329 YMMLALGMG---SYRTALFHLITHAYSKALLFLGSGSVIHsmetVVGYSPDKSqnmvlMGGLTKHVPITKTAFLLGTLSL 405
Cdd:PRK07691 313 VILVGVAMMtesGMIGAIYYLIHDMIVKAALFLLIGIMIK----ITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSL 383
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1779937220 406 CGIPPLACFWSKDEILNDSWLY-SPIFAIIAWSTAGLTAFYMFRIYLLTFEG 456
Cdd:PRK07691 384 AGIPPLSGFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWG 435
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
89-387 |
8.82e-25 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 108.97 E-value: 8.82e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 89 IDPLTSIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSL--FSTSMLGLvtSSNLIQIYIFWELVGMCSYLLIGFWF 166
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGATLLGLTLLIGLNK 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 167 TRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRdlfeifkNLISNNEVNVLFVILCAV---LLFAGAVAKSAQ 243
Cdd:PRK08601 148 GWKVAREAAKISGMLFLISWLALALAIVWLFIATGEWQLT-------SVLSNENLAQLGTWEKTGinlLLILAVMIPAAQ 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLFPLFI-VIPYIMNFIslIGIITVFLGATLALAQKDIKRGLAYS 322
Cdd:PRK08601 221 WPFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHdDIAQILLLI--FASISVLIGTGISLVQVDYKRQLVGS 297
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1779937220 323 TMSQLGYMMLALGMGSYRTALFHLITHAYSKALLFLGSGSVIHSMETVVGYSPDKSQNMVLMGGL 387
Cdd:PRK08601 298 TMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFNIVKQANEKKSYLWIVVGRV 362
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
44-454 |
1.07e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 108.81 E-value: 1.07e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 44 SVLLLSIVMILSIDLFIQQLNSSSIYqciWSWIINNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMFHDQGYLR 123
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVS---LNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 124 FFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTrPIAANACQKAFVTNRVGDFGLLLgILGFYWIIGSf 203
Cdd:MTH00063 78 LNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFL-LIGLSCWGGS- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 204 efrdlfeifknlisnneVNVLFVILCAVLLFAgavaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlFPL 283
Cdd:MTH00063 155 -----------------GSFLCCLFFFLIVFT----KSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDY 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 284 FIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRTALFHLITHAYSKALLFLGSGSV 363
Cdd:MTH00063 213 LLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 364 IhsmetvVGYSPDKSQNMVLMGGLTKHVPITKTAFLLgtLSLCGIPPLACFWSKDEILND--SWLYSPIFAIIAWSTAGL 441
Cdd:MTH00063 293 M------SGSGGSQSSNCVYSSILYGSWNLFYLFLLV--LGLSGVPFIGVFFSKHFLLSSfsSVVFNVSLLLVVILCVFL 364
|
410
....*....|...
gi 1779937220 442 TAFYMFRIYLLTF 454
Cdd:MTH00063 365 SYLYSFRLCLILF 377
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-449 |
2.09e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 107.51 E-value: 2.09e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 11 IPFVPLPVPVLIGVGLFLfptaTKNLRRMWAFqSVLLLSIVMILSIDLFIQQLNSSSIYQCIWSWIINNDFSLEfgylID 90
Cdd:PRK12662 5 LPILQVIIPLLSAVVCAL----LKNRKLVKII-SCIVVAVSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELR----VD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 91 PLTSIMSILITTVGILVLIYS---DNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFT 167
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYGiypNRKEISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRD 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 168 RPiAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIFKNLISNN--EVNVLFVilcavllFAGAVAKSAQFP 245
Cdd:PRK12662 156 KK-ALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRaiQIGVLFI-------MVGLFIKAALFP 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 246 LHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLFP-------LFIVIPYIMNFISLIGIITVFlGATLALAQKDIKR 317
Cdd:PRK12662 228 FHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIVYdvfkanfVFTTLPFNNVFMILAALAIVF-GSVLAILSKDIKR 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 318 GLAYSTMSQLGYMMLALGMGSYR---TALFHLITHAYSKALLFLGSGSVIHSMETVvgyspdksqNMVLMGGLTKHVPIT 394
Cdd:PRK12662 306 IFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFGTT---------KLEDCLNLWKSMPKI 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1779937220 395 KTAFLLGTLSLCGIPPLACFWSKDEILN---DSWLYSPIFAIIAWStaGLTAFYMFRI 449
Cdd:PRK12662 377 TLAFVLLSLSLIGMPPTSGFVAKWYILDafiKSNAWIGLVVLLVGS--GLSVIYVWKI 432
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
11-454 |
8.11e-24 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 105.80 E-value: 8.11e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 11 IPFVPLPVPVLIGVGLFLFptatKNLRRMWAFQSVLLLSIVMILSIDLFIQQLNSSSIYQCIWSWiinndfSLEFG--YL 88
Cdd:PRK12663 5 LLILPMLLPLLCGLVLVFL----RNRDRLQRYLAIGTLTILTLISLALLIYVQRHGPITLDFGGW------LPPFGiqFT 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 89 IDPLTSIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 168
Cdd:PRK12663 75 GDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQER 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 169 PiAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIFKNLISNNEVnvlfVILCAVLLFAGAVaKSAQFPLHv 248
Cdd:PRK12663 155 E-QLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATL----TTIALLFLLAFGM-KAALFPFM- 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 249 WLPDAMEGP-TPISALIhAATMVAAGIFLVARLFP-LFIVIPYIMNF-ISLIGIITVFLGATLALAQKDIKRGLAYSTMS 325
Cdd:PRK12663 228 WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHPlLATMAAITMVIGALGALAYKDIRRIAGYQVIS 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 326 QLGYMMLALGMGSY---RTALFHLITHAYSKALLFLGSGSVIHsmetVVGYSPDKSqnmvlMGGLTKHVPITKTAFLLGT 402
Cdd:PRK12663 307 SIGFILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLVR----LTGYRSLQY-----LGGLYRKEPLFGALFLILI 377
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1779937220 403 LSLCGIPPLACFWSKDEIL-----NDSWlyspIFAIIAWSTAGLTAFYMFRIYLLTF 454
Cdd:PRK12663 378 FAIGGLPPFSGFWGKVLLVqgaldNGAY----ILLALMLITSLITMYSLFRIFFLAY 430
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
45-478 |
4.69e-22 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 100.46 E-value: 4.69e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 45 VLLLSIVMILSIDLFIQQLNSS------------SIYQCIWSWIINNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSD 112
Cdd:CHL00049 21 ILIFGLILLLMIDLTSDQKDIPwlyfisstslvmSITALLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSV 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 113 NYMFHDQGYLRFFayMSLFSTSMLG---LVTSSNLIQIYIFWELVGMCSYLLIGFwFTRPIAANACQKAFvtnrvgdfgL 189
Cdd:CHL00049 101 EYIECTEMAITEF--LLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY-TKKDVRSNEATMKY---------L 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 190 LLG-----IL--GFYWIIG-SFEFRDLFEIFKNLISNNEVNVLFVILCAVLLFAGAVAKSAQFPLHVWLPDAMEG-PTPI 260
Cdd:CHL00049 169 LMGgasssILvyGFSWLYGlSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPV 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 261 SALIhAATMVAAGIFLVARLFPlfIVIPYIMN----FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM 336
Cdd:CHL00049 249 VAFL-SVTSKVAASALATRIFD--IPFYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIV 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 337 GSYRTALFHLITHAYSKALLFLGSGSVIHSMETVVGyspdkSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWS 416
Cdd:CHL00049 326 GDSNDGYASMITYMLFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFG 400
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1779937220 417 KDEILNDSW---LYSPIFaiIAWSTAGLTAFYMFRIYLLTFEGH---FNVHFQNYSGKKSTPFYSISL 478
Cdd:CHL00049 401 KLYLFWCGWqagLYFLVS--IGLLTSVISIYYYLKIIKLLMTGRnqeITPYVRNYRRSPLRSNNSIEL 466
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
124-445 |
2.28e-19 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 92.07 E-value: 2.28e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 124 FFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWfTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSF 203
Cdd:PRK06473 109 YYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGAS 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 204 EFRdlfeiFKNLISNN-EVNVLFVILCAVLLfaGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVAR-- 279
Cdd:PRK06473 188 SFD-----YEPLRSHTlPLSTQLLLLAPILV--GFGIKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRfg 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 280 --LFPLFIVipYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRTALFHLITHAYSKA 354
Cdd:PRK06473 260 vgLFPEAWV--YLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQMISHGLISA 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 355 LLFLGSGSVihsmetvvgYSPDKSQNMVLMGGL---TKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIF 431
Cdd:PRK06473 338 LLFLLVGVV---------YKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQ 408
|
330
....*....|....
gi 1779937220 432 AIIAWSTAGLTAFY 445
Cdd:PRK06473 409 TLLCMIGTGLTAVY 422
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
16-451 |
3.30e-19 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 91.70 E-value: 3.30e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 16 LPVPVLIGVGLFLFPTATKNLRRMWAFQSVLLL--SIVMILSIDLFIQQLNSSSIYQciWSWIINNDFSLEfgylIDPLt 93
Cdd:PRK07363 8 LPILGAIIIGFFPGNLPSARLRQITLVFAVLVLawSLFLLTQFDLSDPGMQFQEYLP--WNEPLGLSYSLG----VDGL- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 94 SIMSILITTVGILVLIYSDNYMFHDQGYlrFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPiAAN 173
Cdd:PRK07363 81 SLPLLVLNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-RGY 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 174 ACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIFKNLISNNEVNVLfvilcaVLLFAGAVAKSAQFPLHVWLPDA 253
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILL------TGLLLGFGIKIPLVPLHTWLPDA 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 254 MEGPTPISALIHAATMVAAGIFLVAR----LFP--LFIVIPYImnfiSLIGIITVFLGATLALAQKDIKRGLAYSTMSQL 327
Cdd:PRK07363 232 YTEASPAVAILLGGVLAKLGTYGLLRfglqLFPqtWSLVAPGL----AIIGTISVIYGALSAIAQKDIKRMVAYSSIGHM 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 328 GYMMLALGMG---SYRTALFHLITHAYSKALLFLGSGSVihsmETVVGyspdkSQNMVLMGGLTKHV---PITKTAFLLG 401
Cdd:PRK07363 308 GYILVAAAAGtqlSLLGAVAQMISHGLILALLFHLVGIV----ERKVG-----TRDLDVLNGLMNPIrglPLTSALLVLA 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1779937220 402 TLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYmFRIYL 451
Cdd:PRK07363 379 GMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY-FVILL 427
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
227-454 |
1.07e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 86.95 E-value: 1.07e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 227 ILCAVLLFAGAVaKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLVARLFPLFIVIPYIMNFISLIGIITVFLG 305
Cdd:PRK12665 210 ALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 306 ATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRTALFHLITHAYSKALLFLGSGSVihsmETVVGyspdkSQNMV 382
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVGLI----ERQAG-----SSSLR 358
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1779937220 383 LMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEIL-----NDSWLyspIFAIIAWS--TAGLTAFYMFRIYLLTF 454
Cdd:PRK12665 359 RLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeagaeDGTWL---AWALVAGGvvTSLLTLYAVARVWTKAF 434
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
89-456 |
3.05e-17 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 85.65 E-value: 3.05e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 89 IDPLTSIMSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLFSTSMLGlVTSSNLIQIYIFWELVGMCSYLLIGfwftr 168
Cdd:PRK08042 58 ISPLNAIWLITLGLCGLFVSLFNIDWHRHAQVKANGLLINLLMAAAVCA-VIASNLGMFVVMAEIMALCAVFLTG----- 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 169 piaanaCQKA----FVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIFKNLISNNEVNVLFVIlcAVLLFAGAVaksaqf 244
Cdd:PRK08042 132 ------NSKEgklwFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVI--GFGLLAGII------ 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLFIVIPYIMNFISLI-GIITVFLGATLALAQKDIKRGLAYST 323
Cdd:PRK08042 198 PLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVlGMITAFVGGLYALMEHNIQRLLAYHT 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 324 MSQLGYMMLALGMGSYRTA--------------LFHLITHAYSKALLFLGSGSVIHSmetvVGYspdksQNMVLMGGLTK 389
Cdd:PRK08042 278 LENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFR----TGH-----RDIEKLGGIGK 348
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1779937220 390 HVPITKTAFLLGTLSLCGIPPLACFWSKDEI------LNDSWLY-----SPIFAIIAWSTAGLTAFYMFRIYLLTFEG 456
Cdd:PRK08042 349 KMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFvarllGPLLAVGLAITGALAVMCMAKVYGVTFLG 426
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
87-417 |
1.69e-16 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 82.77 E-value: 1.69e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 87 YLIDPLTSIMSILITTVGILVLIYSDNYMFHDQGYLrFFAYMSLFSTSmlGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 166
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYV-FLMLMGLASVS--AIVLADDIFNLYVFFEIAAIVQVGLVIASG 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 167 TRpiaaNACQKAFVTNRVGDFG---LLLGILGFYWIIGSFEFRDLfeifKNLISNNEVNVLFVILCAVLLFaGAVAKSAQ 243
Cdd:PRK06277 145 TE----EAYKAALKYMILGNVAgsiLLLGIGFLLASTGTLNITDI----HNALLVNPTSPVIYGGLLLLIF-GLLYGSGL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 244 FPLHVWLPDAMEGPTP-ISALIHA---ATMVAAGIFLVaRLFPLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGL 319
Cdd:PRK06277 216 PPFHTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLL 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 320 AYSTMSQLGYMMLALGMG---SYRTALFHLITHAYSKALLFLGSGSVihsmetvvgYSPDKSQNMVLMGGLTKHVPITKT 396
Cdd:PRK06277 295 AYHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVAF 365
|
330 340
....*....|....*....|.
gi 1779937220 397 AFLLGTLSLCGIPPLACFWSK 417
Cdd:PRK06277 366 MVLCAKLAISGVPPFNGFQSK 386
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
124-435 |
4.56e-16 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 81.62 E-value: 4.56e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 124 FFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW--FTRPIAANacqKAFVTNRVGDFGLLLGILGFYWIIG 201
Cdd:PRK12561 89 FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWggQKRLYAAT---KFILYTALASIFILVAGLALALSGD 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 202 SFEFrDLFEIfknliSNNEVNVLFVILC-AVLLFAGAVaKSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFLV-- 277
Cdd:PRK12561 166 TFTF-DLAEL-----GAKSYPLALELLLyAGFLIAFGV-KLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLKmg 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 278 ----------------ARLFPLFIVIpyimnfisliGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRT 341
Cdd:PRK12561 232 gyalirfnvqmlpdahVYFAPALAIL----------GVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTD 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 342 -----ALFHLITHAYSKALLFLGSGsvihsmetvVGYSPDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWS 416
Cdd:PRK12561 300 lgisgAMLQMISHGLIAAALFFLTG---------VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
330 340
....*....|....*....|..
gi 1779937220 417 KDEI---LNDSWLYSPIFAIIA 435
Cdd:PRK12561 371 ELTVflgITSSDVYSSTFRTIT 392
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
84-421 |
8.36e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 80.95 E-value: 8.36e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 84 EFGYLIDPLTSIMSILITTVG-ILVLIYSDNYMFH-------DQGYLRFF--AYMSLFSTSMLGLVtSSNLIQIYIFWEL 153
Cdd:PRK08676 55 ESRYLFIDHLGIFVVLIASVVfILAALYARGYVDHllsngelDPENLKVFylGFNLLLSVITFAFF-SDNLALFWIFAEL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 154 VGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILgfywiigsfefrdLFEIFKNLISNNEVN----------- 222
Cdd:PRK08676 134 TTVFSAMLIAILSARENIDAALKYIFIASTAMIFAFIGLIF-------------LFSLTRQALGTGTLNwtelaahasll 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 223 -VLFVILCAVLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLFPLFI---VIPYIMNFISLI 297
Cdd:PRK08676 201 sPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 298 GIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRT---ALFHLITHAYSKALLFLGSGsVIHSMetvvgYS 374
Cdd:PRK08676 280 GIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ-----YR 353
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1779937220 375 PDKSQNmvlMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEIL 421
Cdd:PRK08676 354 SDRFDR---IFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
134-417 |
1.90e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 78.53 E-value: 1.90e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 134 SMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIFK 213
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 214 NLISNNEVNVLF--VILCAVLLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLvarlfpLFIVIPYI 290
Cdd:MTH00196 85 SGQSFSSVSVPIgyLLIIVALLFKLSVA-----PFHMWAPDVYEGaPTKTTALL--AIVPKLGIFS------ILVSIGLN 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 291 MNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY---RTALFHLITHAYSKALLFLgsgsvihsm 367
Cdd:MTH00196 152 VNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFesiQASLVYLFIYIIMSICVFS--------- 222
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1779937220 368 eTVVGYSPDKSQnMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSK 417
Cdd:MTH00196 223 -IILALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGK 270
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
43-417 |
5.06e-15 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 78.55 E-value: 5.06e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 43 QSVLLLSIVMILSIDLFIQQLNSSSI-YQCIWS-----------WIINNDFSLEFGYLIDPLTSIMSILITTVGILVLIY 110
Cdd:PRK02504 18 EGIVILTLLGVLLVDLIGGRTASRWLpYLAIAGlgaalvalalqWDNPNPISFLGSFNADNLSIAFRAIIALSTLVTLLM 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 111 SDNYMfhDQGYLRFFAYMSLFSTSMLG---LVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDF 187
Cdd:PRK02504 98 SWRYV--EQSGTPLGEFAAILLTATLGgmfLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSA 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 188 GLLLGILGFYWIIGSFEfrDLFEIFKNLISNNEvnvLFVILCAVLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIHA 266
Cdd:PRK02504 176 IFLYGSSLLYGLSGGST--QLSAIALALITSPS---LGLALALVFVIAGIAFKISAVPFHQWTPDVYEGsPTPVVAFLSV 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 267 ATMvAAGIFLVARL----FPLFiVIPYIMNFISLiGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---Y 339
Cdd:PRK02504 251 GSK-AAGFALAIRLlvtaFPSF-DEQWKLLFTAL-AILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagY 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 340 RTALFHLITH------AYSKALLF-LGSGSvihsmETVVGYSpdksqnmvlmgGLTKHVPITKTAFLLGTLSLCGIPPLA 412
Cdd:PRK02504 328 ASMVFYLLAYlfmnlgAFACVILFsLRTGT-----DQISDYA-----------GLYQKDPLLTLGLSLCLLSLGGIPPLA 391
|
....*
gi 1779937220 413 CFWSK 417
Cdd:PRK02504 392 GFFGK 396
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
43-421 |
1.36e-14 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 76.98 E-value: 1.36e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 43 QSVLLLSIVMILSIdLFIQQLNSSSIYQCIWSWIINNDFSLEFGYLIdpltsIMSILITTVGILVLIYSDNYMFHDQGYL 122
Cdd:MTH00199 24 LSTLKLSIGVLLLI-GLIVELNSLNLFQSDKVLDGTNGLLLTNSWII-----ISKIIIIIGSISILLMGSGETILSEGGQ 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 123 RFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGS 202
Cdd:MTH00199 98 SSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGE 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 203 FEFRDLfeifkNLISNNEVNVLFVILCavLLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFlvarlf 281
Cdd:MTH00199 178 TSIQGI-----NSILTGDVGKILITIS--LLFKLSAA-----PFHMWAPDVYEGaPTITTALL--ATVPKIGVF------ 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 282 PLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRT---ALFHLITHayskALLFL 358
Cdd:MTH00199 238 SILVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESiqaSLIYMIIY----VIMSI 313
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1779937220 359 GSGSVIHSMETVVGYspdksqnMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEIL 421
Cdd:MTH00199 314 CSFSIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
75-125 |
9.76e-14 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 65.91 E-value: 9.76e-14
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1779937220 75 WIINNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMFHDQGYLRFF 125
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
95-447 |
1.56e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 64.17 E-value: 1.56e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 95 IMSILITTVGILVLIYSDNYMFHDqgylrFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANA 174
Cdd:MTH00226 109 ILTGFIVPCSILISWHSVKYLTKS-----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQA 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 175 CQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIfKNLISNNEVNVLFvilcaVLLFAGAVAKSAQFPLHVWLPDA- 253
Cdd:MTH00226 184 AYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQKWIF-----LGIFLAMAVKIPIFPFHIWLPKAh 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 254 MEGPTPISALIHAATMVAAGIFLVARLFPLF-IVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMML 332
Cdd:MTH00226 258 VEAPVAGSVLLAGILLKLGGYGLVRLSWPILpLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSI 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 333 AL---GMGSYRTALFHLITHAYSKALLFLgsgsvihsMETVVgYSPDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIP 409
Cdd:MTH00226 338 TLvthDIIGLTGSIFIMLAHGIVSSLLFI--------LVTIL-YDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVP 408
|
330 340 350
....*....|....*....|....*....|....*...
gi 1779937220 410 PLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMF 447
Cdd:MTH00226 409 PSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
223-445 |
2.38e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 63.72 E-value: 2.38e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 223 VLFVILCAVLLFAGAVaKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLFPLF--IVIPYIMNFIS---- 295
Cdd:PRK12666 207 ALLEAGAALLLVVFLI-KAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLfgPEAGASAGFGQdwll 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 296 LIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRT---ALFHLITHAYSKALLFL----------GSGS 362
Cdd:PRK12666 284 PGGLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAAtaaALYYLVHSTLAAAALFLladlverqrgAAAD 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 363 VIHSMETVvgYSPDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILN---------DSWLY------ 427
Cdd:PRK12666 364 RLAVTPEL--YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQallnppgagAAWWLwalvll 441
|
250
....*....|....*...
gi 1779937220 428 SPIFAIIAWSTAGLTAFY 445
Cdd:PRK12666 442 SGLAALIALTRAGIRLFW 459
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
124-393 |
3.93e-10 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 62.80 E-value: 3.93e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 124 FFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW--FTRPIAANacqKAFVTNRVGDFGLLLGIL--GFYWI 199
Cdd:PRK02546 117 FYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWggKKRQYAAT---KFILYTAGSSLFILLAALamAFYGD 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 200 IGSFEFRDLfeifknliSNNEVNVLFVILC-AVLLFAGAVaKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIFLV- 277
Cdd:PRK02546 194 TPTFDMTAL--------AAKDFGLGFQLLCyAGLLIAYGV-KLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLKm 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 278 -----------------ARLFPLFIVIpyimnfisliGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYR 340
Cdd:PRK02546 259 ggyallrmnagmlpdahAQFAPLLIVL----------GVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFT 326
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 341 T-----ALFHLITHAYSKALLFLgsgsvihsmetVVGYSPDKSQNMVL--MGGLTKHVPI 393
Cdd:PRK02546 327 DlgtsgAMLQMISHGLIGASLFF-----------LVGATYDRTHTLMLdeMGGVGQKMRK 375
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
94-411 |
4.10e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 62.89 E-value: 4.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 94 SIMSILITTVGILVLIYSDNYMfHDQGYLrffayMSLFSTSMLGLV---TSSNLIQIYIFWELVGMCSYLLIGfwftrpI 170
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEYD-HYGKWL-----SSLYILTILGMAivlTSDNYLLFLAGWEIMTIPSYVAIA------L 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 171 AANACQKAFVTNRVGDFGLLLGILGFYW---IIGSFEFrdlfeifknlisnnevNVLFVILCAVLLFAGAVAKSAQFPLH 247
Cdd:PRK06459 115 TKKNKRPAFVFMAFGELSTVLILAGFAWafiISGTTNF----------------SYLPSPVPLILASFGFIIKMGMMPFL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 248 V--WLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLFIVIP--YIMNFISLIGIITVFLGATLALAQKDIKRGLAYST 323
Cdd:PRK06459 179 VseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPigYFGLTILAIGAFSILFGALYAYVSENVKGLLAFST 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 324 MSQLGYMMLALGM--------GSYR-----TALFHLITHAYSKALLFLGSGSVIHSmetVVGYSPDKSQNMVLMGGltkh 390
Cdd:PRK06459 259 IENNGAILVALGLymvtkqliTSIEhfsliTVILYSFAHSVAKTGLFLSSGLQEKQ---SITYSKKIRNRWIELGL---- 331
|
330 340
....*....|....*....|.
gi 1779937220 391 vpitktafLLGTLSLCGIPPL 411
Cdd:PRK06459 332 --------TLLASSLSGLLPN 344
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
74-409 |
1.38e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 61.23 E-value: 1.38e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 74 SWIINNDFSLEFGYLIDPLTSI------MSILITTVGILVLIYSDNYMFHDQGYLRFFAYMSLfstsmLGLVTSSNLIQI 147
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVDGVslffilLTTLLIPICILISWKSIKFLFKEFLLCLLFLEVLL-----IGVFSVLDLLLF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 148 YIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLfeifknLISNNEVNVLFVI 227
Cdd:MTH00204 138 YILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQIL------LNIKLPLSIQKWL 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 228 LCAVllFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLFPLFIVIP-YIMNFISLIGIITVFLG 305
Cdd:MTH00204 212 LVGF--FLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASeYFAPLIVMLSVIAVIYG 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 306 ATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRTALFHLITHAYSKALLFLGSGSVihsmetvvgYSPDKSQNMV 382
Cdd:MTH00204 290 SLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIAVTFL---------YERHHTRLIK 360
|
330 340
....*....|....*....|....*..
gi 1779937220 383 LMGGLTKHVPITKTAFLLGTLSLCGIP 409
Cdd:MTH00204 361 YYRGLTLTMPLFVIIMLVLSLANMGFP 387
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
22-466 |
3.64e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 59.57 E-value: 3.64e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 22 IGVGLFLFPTATKNLRRMWAFQSVLLLSIVMILSIDLFIQQLNSSSIyqciwswiinndFSLEFGYLIDPLTSIMSILIT 101
Cdd:MTH00206 2 ILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGW------------SFSNLYLSYDPLSSPLVILSC 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 102 TVGILVLIYSDNYMfHDQGYLRFFAYMSLFSTSMLGLV---TSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKA 178
Cdd:MTH00206 70 WLLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYF 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 179 FVTNRVGDFGLLLGILGFYWIIGSFEFrDLFEIFKNLISNNEVNVLFVILcavllfaGAVAKSAQFPLHVWLPDA-MEGP 257
Cdd:MTH00206 149 LFYTLIGSLPLLIALLFLQNSLGSLSL-YILYFSKLTTWNNNLWWLACIL-------AFLVKLPLYGVHLWLPKAhVEAP 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 258 TpisalihAATMVAAGIFLVA---RLFPLFIVIPYIMN----FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYM 330
Cdd:MTH00206 221 V-------AGSMVLAGVLLKLggyGMMRIILILGPSTKlssyFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLV 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 331 MLALGMG---SYRTALFHLITHAY-SKALLFLGSgsvihsmetvVGYSPDKSQNMVLMGGLTKHVPITKTAFLLGTLSLC 406
Cdd:MTH00206 294 TAGILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANL 363
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 407 GIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHFNVHFQNYS 466
Cdd:MTH00206 364 GLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLS 423
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
240-449 |
1.13e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 58.33 E-value: 1.13e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 240 KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVArlfpLFIVIPYIMNfislIGIITVFLGATLALAQKDIKRG 318
Cdd:MTH00198 312 KLAAAPFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTS----LVITSKLLLS----VAIISLVVGAFGALNQTRIKRL 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 319 LAYSTMSQLGYMMLALGMGSYRtALFHLITHAYSKALLFLGSGSVIHSMETVVGYSPDKSQNMVLMGG------------ 386
Cdd:MTH00198 384 LAYSGIGHIGFILIGVSAGTYE-SLQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGSFGNynlvrrlvdlti 462
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1779937220 387 LTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDS----WLYS-PIF---AIIAWSTAGLTAFYMFRI 449
Cdd:MTH00198 463 LSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSikiaFSSSlSIYylvALFAIICTCISAFYYIRI 533
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
127-449 |
3.11e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 56.13 E-value: 3.11e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 127 YMSLFSTSMLGL-----VTSSNLIQIYIFWELVGMCSYLLIGFWFTrPIAANACQKAFVTNRVGDFGLLLGILGFYWIIG 201
Cdd:MTH00200 4 LILPLFILSLGLgtlltFSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 202 SFEFRDLFEIFknlisnnevnVLFVILCAVLLfagavaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGiflvarlF 281
Cdd:MTH00200 83 QWGISEMLGPL----------SETLILLALAL------KLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAP-------F 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 282 PLFIVIPYIMN--FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRTALFHLIThayskallflg 359
Cdd:MTH00200 140 ALLIQLAPALNsnILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLY----------- 208
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 360 sgsVIHSMETVVGYSPDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYS-PIFAIIAWST 438
Cdd:MTH00200 209 ---VIITLTVFLLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGlFIYATILLLG 285
|
330
....*....|.
gi 1779937220 439 AGLTAFYMFRI 449
Cdd:MTH00200 286 SLLSLFFYLRL 296
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
7-398 |
8.35e-08 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 55.34 E-value: 8.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 7 YAWIIPFVPLPVPVliGVGLFLFPTATKNLRRmWAFQSVLLLSIVMILSIDLFIQQLNSSSIyQCI--WSWIINNDFSLE 84
Cdd:CHL00011 4 FPWLTIIVVLPIFA--GSLIFFLPHRGNKVIR-WYTLCICLLELLLTTYAFCYHFQLDDPLI-QLKedYKWINFFDFHWR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 85 FGylIDPLtSIMSIL----ITTVGILVL--IYSDNYMFHdqgylrfFAYMSLFStSMLGLVTSSNLIQIYIFWELVGMCS 158
Cdd:CHL00011 80 LG--IDGL-SIGPILltgfITTLATLAAwpVTRNSRLFY-------FLMLAMYS-GQIGLFSSRDLLLFFIMWELELIPV 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 159 YLLIGFW--FTRPIAANacqKAFVTNRVGDFGLLLGIL--GFYwiiGSFEFRDLFEIFKNLISNNEVNVLFVIlcaVLLF 234
Cdd:CHL00011 149 YLLLSMWggKKRLYSAT---KFILYTAGGSIFLLIGVLgmGLY---GSNEPTLNFETLANQSYPVALEILFYI---GFLI 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 235 AGAVaKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVA----------RLFP--LFIVIPYIMnfisLIGIIT 301
Cdd:CHL00011 220 AYAV-KLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMgayglirinmELLPhaHSIFSPWLV----IVGAIQ 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 302 VFLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRT-----ALFHLITHAYSKALLFLgsgsvihsmetVVGYSPD 376
Cdd:CHL00011 288 IIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSITDtglngAILQIISHGFIGAALFF-----------LAGTSYD 354
|
410 420
....*....|....*....|....
gi 1779937220 377 KSQNMVL--MGGLTKHVPITKTAF 398
Cdd:CHL00011 355 RIRLVYLdeMGGIAIPMPKIFTMF 378
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
222-435 |
1.70e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 53.74 E-value: 1.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 222 NVLFVILCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLFIVIPYIMnfisLIGIIT 301
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLC----VISVLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 302 VFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRTALFHLITHAYSKALLFLGSGSVIHSMETVVGYSPDKSQNM 381
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGL 234
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1779937220 382 VLMGGLtkhvpitktafllgtLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIA 435
Cdd:MTH00144 235 SIISLL---------------LSLGGLPPFLGFCSKLLVLISSMESSPLLLILL 273
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
245-423 |
2.27e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 53.67 E-value: 2.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLvarlfpLFIVIPYI-MNFISLIGIITVFLGATLALAQKDIKRGLAYST 323
Cdd:MTH00112 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLTL------LLMTSNSLnPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSS 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 324 MSQLGYMMLALGMgSYRTALFHLITHAYSKALLFLgsgsVIHSMETVvgyspdKSQNMVLMggLTKhVPITKTAFLLGTL 403
Cdd:MTH00112 184 IAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTTSTK------TLKDMMTS--WTK-SPTLNTTLMLTLL 249
|
170 180
....*....|....*....|
gi 1779937220 404 SLCGIPPLACFWSKDEILND 423
Cdd:MTH00112 250 SLAGLPPLTGFMPKWLILQE 269
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
47-444 |
2.37e-07 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 53.98 E-value: 2.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 47 LLSIVMILSIDLFIQQLNSSSIYQC---IWSWIINNDFSLEFGYL-IDPLTSIMSILITTVGILVLIYSDNYMFHDQGYL 122
Cdd:MTH00014 11 LLLLPLIKYPWSWALTFSTLLLLSLftlLNLYPMSAPYSMFTESLsSDMLSAPLITLTLWITALMILASFKIFQNNKAPK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 123 RFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGS 202
Cdd:MTH00014 91 TFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNS 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 203 FEFrdlfeifknLISNNEVNVLFVI-LCAVLLFAGAVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL---- 276
Cdd:MTH00014 171 LSM---------LMSSMEPPSIYLMnLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklgg 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 277 --VARLFPLFIVI-PYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRTALFHLITHA 350
Cdd:MTH00014 235 ygLLRMSSLFMHInKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTswgWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 351 YSKALLFlgsgsVIHSMEtvvgYSPDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSK----DEILNDSWL 426
Cdd:MTH00014 315 LCSSALF-----ALANMT----YETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEimllTSILSSSLS 385
|
410
....*....|....*...
gi 1779937220 427 YSPIFAIIAWSTAGLTAF 444
Cdd:MTH00014 386 TAILLAITSFLAAAYSLF 403
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
88-475 |
9.26e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 51.84 E-value: 9.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 88 LIDPLTSIMSILITTVGILVLIYSDNYMfHDQGYLRFFAYMSLFSTSMLGLV---TSSNLIQIYIFWELVGMCSYLLIGF 164
Cdd:MTH00068 57 GIDQISSPLLILTCWLLPLMILASQNHL-KNEPINRQRTYISMLIILQLTLIlafSATELILFYIFFEATLIPTLIIITR 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 165 WFTRPIAANACQK-AFVTnRVGDFGLLLGILGFYWIIGSFEFrDLFEIFKNLISNNEVNVLFVILCavlLFAGAVaKSAQ 243
Cdd:MTH00068 136 WGNQEERLNAGTYfLFYT-LAGSLPLLIALLILQNSLGSLSL-ILLELMSPMQLMTYTNKIWWLAC---LLAFMV-KMPL 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 244 FPLHVWLPDA-MEGPTpisalihAATMVAAGIFL---------VARLF-PLFIVIPYIMNFISLIGIItvfLGATLALAQ 312
Cdd:MTH00068 210 YGLHLWLPKAhVEAPI-------AGSMILAAVLLklggygilrISILLtPLSKELSYPFIILALWGVL---MTSLICLRQ 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 313 KDIKRGLAYSTMSQLGYMMLALGMG---SYRTALFHLITHAY-SKALLFLGSGSvihsmetvvgYSPDKSQNMVLMGGLT 388
Cdd:MTH00068 280 TDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCLANTN----------YERTHSRTLLLLRGAQ 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 389 KHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHFNVHFqnysgK 468
Cdd:MTH00068 350 TILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNHL-----K 424
|
....*..
gi 1779937220 469 KSTPFYS 475
Cdd:MTH00068 425 TLFPTYT 431
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
95-353 |
1.77e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 51.21 E-value: 1.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 95 IMSILITTVGILVLIYSDNYMFHDqgylrFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANA 174
Cdd:MTH00217 87 ILTALLTPICILISWNSIKFLIKE-----FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQA 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 175 CQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFeifkNLISNNEVNVLFVIlcavLLFAGAVAKSAQFPLHVWLPDA- 253
Cdd:MTH00217 162 SYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC----CLKIEKELQYFIFL----GFFLSLAIKIPKIPFHIWLPQAh 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 254 MEGPTPISALIHAATMVAAGIFLVARLFPLF-IVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLG---- 328
Cdd:MTH00217 234 VEAPVAGSVILAGVLLKLGGYGFIRFSWPLLpEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGlvtl 313
|
250 260 270
....*....|....*....|....*....|....*....
gi 1779937220 329 --------------YMMLALGMGSyrTALFHLITHAYSK 353
Cdd:MTH00217 314 gifshtiqglvaaiFLMLAHGLVS--SALFIAVTFLYER 350
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
89-464 |
2.56e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 50.72 E-value: 2.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 89 IDPLTSIMSILITTVGILVLIYSDNYMFHdQGYLRFFAYMSLFSTSMLGLV---TSSNLIQIYIFWELVGMCSYLLIGFW 165
Cdd:MTH00127 59 TDPLSTPLLVLTCWLLPLMILASQNHTAP-EPINRQRMYITLLTSLQIFLIlafGATEIIMFYVMFEATLIPTLIIITRW 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 166 FTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLfEIFKNLISNNEVNVLFVILC--AVLLfagavaKSAQ 243
Cdd:MTH00127 138 GNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTL-QYSQPLQLSSWADKLWWAGCllAFLV------KMPL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR----LFPLFIVIPYIMNFISLIGIItvfLGATLALAQKDIKRGL 319
Cdd:MTH00127 211 YGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRmmvmLDPLTKELSYPFIILALWGII---MTGSICLRQTDLKSLI 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 320 AYSTMSQLGYM---MLALGMGSYRTALFHLITHAYSKALLFLGSGSvihsmetvvGYSPDKSQNMVLMGGLTKHVPITKT 396
Cdd:MTH00127 288 AYSSVSHMGLVaggILIQTPWGFTGALILMIAHGLTSSALFCLANT---------NYERTHSRTMLLARGLQMILPLMAT 358
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1779937220 397 AFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHFNVHFQN 464
Cdd:MTH00127 359 WWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIA 426
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
87-332 |
7.42e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 49.01 E-value: 7.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 87 YLIDPLTSIMSILITTVGILVLIYSDN--------YMFHDQGYLrFFAYMSLFSTSMLGLVTSSNLIQIYIFWELVGMCS 158
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 159 YLLIGFWfTRPIAANACQKAFVTNRVGDFGLLLGILGFYWIIGSFEFRDLFEIFKNlisnnEVNVLFVILCAVLLFAGAV 238
Cdd:PRK06591 152 YVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYLQE-----HTNSRIITIAIGFFLIGAI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 239 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLfpLFIVIPY------IMNFISLIGIITVFLGATLALAQ 312
Cdd:PRK06591 226 LKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKF--TYIIIGYetiktaITNFIRPIALATLIIAPYFAYQA 303
|
250 260
....*....|....*....|
gi 1779937220 313 KDIKRGLAYSTMSQLGYMML 332
Cdd:PRK06591 304 KNFKNIIIYSCFTQIGYVFL 323
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
222-478 |
4.41e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 46.20 E-value: 4.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 222 NVLFVILCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLFPLFIVIPYIMNFISLI--GI 299
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFL---------LATWQKLAPLLILAFNSSSFMGLLicSV 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 300 ITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRTALFHLITHAYSKALLFLGSGSVIHSMETVVGYSPDKSQ 379
Cdd:MTH00197 145 LSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 380 NMVLmggltkhvpitktaFLLGTLSLCGIPPLACFWSKDEILND--SWLYSPIFAIIAWSTAgLTAFYMFRIYLLTFegh 457
Cdd:MTH00197 225 NLVF--------------LGLSFLSLGGLPPLSGFFLKWLILTSllSSNISLITFMLILSTC-FSLYYYLSLAYKSL--- 286
|
250 260
....*....|....*....|.
gi 1779937220 458 FNVHFQNYSGKKSTPFYSISL 478
Cdd:MTH00197 287 ILSNWMINFLMKINLLYSGLF 307
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
189-433 |
9.51e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 45.31 E-value: 9.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 189 LLLGILGFYWIIGSFefrdlfeifknLISNNEVNVLFVILCAVLLFagavaKSAQFPLHVWLPDAMEGPTPISALIhaat 268
Cdd:MTH00041 70 LLNGALIQAWLSGSW-----------SINGPLNTLSSIIITLALAL-----KLGLAPCHFWFPDVLQGLPFLQGLI---- 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 269 mvAAGIFLVARLFPLFIVIPYI-MNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRTALFHLI 347
Cdd:MTH00041 130 --IATWQKIAPLILLISISNLLnSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLI 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 348 THAYSKALLFLGSGSVIHSMETVvgyspdksqnmvlmGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSK-----DEILN 422
Cdd:MTH00041 208 YIIINTSIFLIGNNFSLSTLSHL--------------NKLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCLIQN 273
|
250
....*....|.
gi 1779937220 423 DSWLYSPIFAI 433
Cdd:MTH00041 274 NSILISIILII 284
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
128-434 |
3.50e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 43.67 E-value: 3.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 128 MSLFSTSMLGLV-------TSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWII 200
Cdd:MTH00150 54 SSSFSLLVLLLClilvlafSVSSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSY 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 201 GSFEFrdlfeIFKNLISNNEVNVLFVILCAVLLFagaVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL--- 276
Cdd:MTH00150 134 GSSFM-----LLISSLRKLLSSMGLWGLLVFLAF---LVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklg 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 277 ---VARLFPLFIVIPYIMN-FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRTALFHLITH 349
Cdd:MTH00150 199 gygILRMMMVFSLSSSSFSiFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSH 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 350 AY-SKALLFLGSGSvihsmetvvgYSPDKSQNMVLMGGLTKHVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYS 428
Cdd:MTH00150 279 GFcSSGLFCLANYT----------YEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYS 348
|
....*.
gi 1779937220 429 PIFAII 434
Cdd:MTH00150 349 PWFFVP 354
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
42-339 |
9.36e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 42.27 E-value: 9.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 42 FQSVLLLSIVMILSIDLFIQQLNSSSIYqciwSWIInndfsleFGYLIDPLTSIMSILITTVGILVLIYSdNYMFHDQGY 121
Cdd:MTH00205 19 KDWSFFSNLLLIGLFFSSFFFSNSFLMT----SFIS-------SSFSFDSLSLPLIMLSFWISLLMVLAS-YKVFKSNKN 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 122 LRFFAYMSLFSTSMLGLVTSS-NLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWII 200
Cdd:MTH00205 87 SKLFTVSVIMLLLILILSFSVdNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLN 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 201 GSFEFRDLFEIFKNLISNNevnvlfvILCAVLLFAGAVaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL--- 276
Cdd:MTH00205 167 FSLSMFFNFPLNFSDFYLF-------LYWIFLMLAFLV-KLPMYFVHLWLPKAhVEAPV-------SGSMILAGVLLklg 231
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1779937220 277 ---VARLF-PLFIVIPYIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY 339
Cdd:MTH00205 232 gygLIRITsMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTS 298
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
221-434 |
1.68e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 41.64 E-value: 1.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 221 VNVLFVILCAVLLFAGAVAKSAQFPLHVWLPDAMEgptpiSALIHAATMVAAGIFLVARLFPLFIVIPYIMnfISLIGII 300
Cdd:PRK12664 138 QNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYP-----AASNFGIIVLSLFTTKVAALVLLLFFSGEEI--LLFLGII 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 301 TVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS-----YRTALFHLITHAYSKALLFLGSGSVIHSMETVvgysp 375
Cdd:PRK12664 211 TAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVINRTRKF----- 285
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1779937220 376 dksqNMVLMGGLTKhVPITKTAFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAII 434
Cdd:PRK12664 286 ----NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLY 339
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
230-479 |
3.86e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 40.15 E-value: 3.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 230 AVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLfivipYIMNFISLIGIITVFLGATLA 309
Cdd:MTH00011 91 ALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGLGG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 310 LAQKDIKRGLAYSTMSQLGYMMLALgMGSYRTALFHLITHAYskallflgsgsVIHSMETVVGYSPDKSQNMvlMGGLTK 389
Cdd:MTH00011 166 MNQTQLRPLLAYSSIGHMGWMTMIS-VFSPSMAILYFMTYII-----------ITTPLMLLFAYLNAFSTKF--NSKISS 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779937220 390 HVPITKTAFLLGTLSLCGIPPLACF---WSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHF-NVHFQNY 465
Cdd:MTH00011 232 MSQTTSMSLFIMLLSLGGLPPFTGFmpkLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTFsSLKSAPY 311
|
250
....*....|....*.
gi 1779937220 466 SGKKS--TPFYSISLW 479
Cdd:MTH00011 312 EPKTKilISMCTLSLG 327
|
|
| |
