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Conserved domains on  [gi|11133618|sp|Q9VHD2|]
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RecName: Full=Probable maleylacetoacetate isomerase 2; Short=MAAI 2; AltName: Full=Glutathione S-transferase zeta 2

Protein Classification

maleylacetoacetate isomerase( domain architecture ID 11492162)

maleylacetoacetate isomerase is a bifunctional enzyme that shows maleylacetoacetate isomerase activity using glutathione as a cofactor and minimal glutathione-conjugating activity

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
maiA TIGR01262
maleylacetoacetate isomerase; Maleylacetoacetate isomerase is an enzyme of tyrosine and ...
17-221 1.22e-107

maleylacetoacetate isomerase; Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism. [Energy metabolism, Amino acids and amines]


:

Pssm-ID: 273527 [Multi-domain]  Cd Length: 210  Bit Score: 308.49  E-value: 1.22e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618    17 ILYSYWRSSCSWRVRIAMNLKEIPYDIKPISLIKsGGEQHCNEYREVNPMEQVPALQIDGHTLIESVAIMHYLEETRPQR 96
Cdd:TIGR01262   1 KLYSYWRSSCSYRVRIALALKGIDYEYVPVNLLR-DGEQRSPEFLALNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPDP 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618    97 PLLPQDVHKRAKVREIVEIICSGIQPLQNLIVL------IHVGEEKKKEWAQHWITRGFRAVEKALSTSAGKYCVGDEIS 170
Cdd:TIGR01262  80 PLLPADPIKRARVRALALLIACDIHPLNNLRVLqylrekLGVEEEARNRWYQHWISKGFAALEALLQPHAGRFCVGDTPT 159
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 11133618   171 MADCCLVPQVFNARRFHVDLRPYPIILRIDRELESNPAFRAAHPSNQPDCP 221
Cdd:TIGR01262 160 LADLCLVPQVYNAERFGVDLTPYPTLRRIAAALAALPAFQRAHPENQPDTP 210
 
Name Accession Description Interval E-value
maiA TIGR01262
maleylacetoacetate isomerase; Maleylacetoacetate isomerase is an enzyme of tyrosine and ...
17-221 1.22e-107

maleylacetoacetate isomerase; Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism. [Energy metabolism, Amino acids and amines]


Pssm-ID: 273527 [Multi-domain]  Cd Length: 210  Bit Score: 308.49  E-value: 1.22e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618    17 ILYSYWRSSCSWRVRIAMNLKEIPYDIKPISLIKsGGEQHCNEYREVNPMEQVPALQIDGHTLIESVAIMHYLEETRPQR 96
Cdd:TIGR01262   1 KLYSYWRSSCSYRVRIALALKGIDYEYVPVNLLR-DGEQRSPEFLALNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPDP 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618    97 PLLPQDVHKRAKVREIVEIICSGIQPLQNLIVL------IHVGEEKKKEWAQHWITRGFRAVEKALSTSAGKYCVGDEIS 170
Cdd:TIGR01262  80 PLLPADPIKRARVRALALLIACDIHPLNNLRVLqylrekLGVEEEARNRWYQHWISKGFAALEALLQPHAGRFCVGDTPT 159
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 11133618   171 MADCCLVPQVFNARRFHVDLRPYPIILRIDRELESNPAFRAAHPSNQPDCP 221
Cdd:TIGR01262 160 LADLCLVPQVYNAERFGVDLTPYPTLRRIAAALAALPAFQRAHPENQPDTP 210
GST_C_Zeta cd03191
C-terminal, alpha helical domain of Class Zeta Glutathione S-transferases; Glutathione ...
104-217 3.64e-66

C-terminal, alpha helical domain of Class Zeta Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.


Pssm-ID: 198300 [Multi-domain]  Cd Length: 121  Bit Score: 200.12  E-value: 3.64e-66
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618 104 HKRAKVREIVEIICSGIQPLQNLIVL------IHVGEEKKKEWAQHWITRGFRAVEKALSTSAGKYCVGDEISMADCCLV 177
Cdd:cd03191   2 KKRARVRAIALIIACDIHPLQNLRVLkyltekLGVSEEEKLAWAQHWIERGFQALEKLLASTAGKYCVGDEPTLADICLV 81
                        90       100       110       120
                ....*....|....*....|....*....|....*....|
gi 11133618 178 PQVFNARRFHVDLRPYPIILRIDRELESNPAFRAAHPSNQ 217
Cdd:cd03191  82 PQVYNARRFGVDLSPYPTIVRINEACLELPAFQAAHPENQ 121
GstA COG0625
Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];
17-219 1.85e-65

Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440390 [Multi-domain]  Cd Length: 205  Bit Score: 201.28  E-value: 1.85e-65
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618  17 ILYSYWRSSCSWRVRIAMNLKEIPYDIKPISLIKsgGEQHCNEYREVNPMEQVPALQIDGHTLIESVAIMHYLEETRPQR 96
Cdd:COG0625   3 KLYGSPPSPNSRRVRIALEEKGLPYELVPVDLAK--GEQKSPEFLALNPLGKVPVLVDDGLVLTESLAILEYLAERYPEP 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618  97 PLLPQDVHKRAKVREIVEIICSGIQPLQNLIV--LIHVGEEKKKEWAQHWITRGFRAVEKALstSAGKYCVGDEISMADC 174
Cdd:COG0625  81 PLLPADPAARARVRQWLAWADGDLHPALRNLLerLAPEKDPAAIARARAELARLLAVLEARL--AGGPYLAGDRFSIADI 158
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*
gi 11133618 175 CLVPQVFNARRFHVDLRPYPIILRIDRELESNPAFRAAHPSNQPD 219
Cdd:COG0625 159 ALAPVLRRLDRLGLDLADYPNLAAWLARLAARPAFQRALAAAEPD 203
PRK15113 PRK15113
glutathione transferase;
30-112 1.16e-17

glutathione transferase;


Pssm-ID: 185068 [Multi-domain]  Cd Length: 214  Bit Score: 78.08  E-value: 1.16e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618   30 VRIAMNLKEIPYDIKPISLikSGGEQHCNEYREVNPMEQVPALQIDGHTLIESVAIMHYLEETRPQ---RPLLPQDVHKR 106
Cdd:PRK15113  22 AFVALQEKGLPFELKTVDL--DAGEHLQPTYQGYSLTRRVPTLQHDDFELSESSAIAEYLEERFAPpawERIYPADLQAR 99

                 ....*.
gi 11133618  107 AKVREI 112
Cdd:PRK15113 100 ARARQI 105
GST_N_2 pfam13409
Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.
24-92 1.08e-15

Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.


Pssm-ID: 433184 [Multi-domain]  Cd Length: 68  Bit Score: 69.20  E-value: 1.08e-15
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618    24 SSCSWRVRIAMNLKEIPYDIKPISLIksgGEQHCNEYREVNPMEQVPALQ-IDGHTLIESVAIMHYLEET 92
Cdd:pfam13409   2 SPFSHRVRLALEEKGLPYEIELVDLD---PKDKPPELLALNPLGTVPVLVlPDGTVLTDSLVILEYLEEL 68
 
Name Accession Description Interval E-value
maiA TIGR01262
maleylacetoacetate isomerase; Maleylacetoacetate isomerase is an enzyme of tyrosine and ...
17-221 1.22e-107

maleylacetoacetate isomerase; Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism. [Energy metabolism, Amino acids and amines]


Pssm-ID: 273527 [Multi-domain]  Cd Length: 210  Bit Score: 308.49  E-value: 1.22e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618    17 ILYSYWRSSCSWRVRIAMNLKEIPYDIKPISLIKsGGEQHCNEYREVNPMEQVPALQIDGHTLIESVAIMHYLEETRPQR 96
Cdd:TIGR01262   1 KLYSYWRSSCSYRVRIALALKGIDYEYVPVNLLR-DGEQRSPEFLALNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPDP 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618    97 PLLPQDVHKRAKVREIVEIICSGIQPLQNLIVL------IHVGEEKKKEWAQHWITRGFRAVEKALSTSAGKYCVGDEIS 170
Cdd:TIGR01262  80 PLLPADPIKRARVRALALLIACDIHPLNNLRVLqylrekLGVEEEARNRWYQHWISKGFAALEALLQPHAGRFCVGDTPT 159
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 11133618   171 MADCCLVPQVFNARRFHVDLRPYPIILRIDRELESNPAFRAAHPSNQPDCP 221
Cdd:TIGR01262 160 LADLCLVPQVYNAERFGVDLTPYPTLRRIAAALAALPAFQRAHPENQPDTP 210
GST_C_Zeta cd03191
C-terminal, alpha helical domain of Class Zeta Glutathione S-transferases; Glutathione ...
104-217 3.64e-66

C-terminal, alpha helical domain of Class Zeta Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.


Pssm-ID: 198300 [Multi-domain]  Cd Length: 121  Bit Score: 200.12  E-value: 3.64e-66
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618 104 HKRAKVREIVEIICSGIQPLQNLIVL------IHVGEEKKKEWAQHWITRGFRAVEKALSTSAGKYCVGDEISMADCCLV 177
Cdd:cd03191   2 KKRARVRAIALIIACDIHPLQNLRVLkyltekLGVSEEEKLAWAQHWIERGFQALEKLLASTAGKYCVGDEPTLADICLV 81
                        90       100       110       120
                ....*....|....*....|....*....|....*....|
gi 11133618 178 PQVFNARRFHVDLRPYPIILRIDRELESNPAFRAAHPSNQ 217
Cdd:cd03191  82 PQVYNARRFGVDLSPYPTIVRINEACLELPAFQAAHPENQ 121
GstA COG0625
Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];
17-219 1.85e-65

Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440390 [Multi-domain]  Cd Length: 205  Bit Score: 201.28  E-value: 1.85e-65
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618  17 ILYSYWRSSCSWRVRIAMNLKEIPYDIKPISLIKsgGEQHCNEYREVNPMEQVPALQIDGHTLIESVAIMHYLEETRPQR 96
Cdd:COG0625   3 KLYGSPPSPNSRRVRIALEEKGLPYELVPVDLAK--GEQKSPEFLALNPLGKVPVLVDDGLVLTESLAILEYLAERYPEP 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618  97 PLLPQDVHKRAKVREIVEIICSGIQPLQNLIV--LIHVGEEKKKEWAQHWITRGFRAVEKALstSAGKYCVGDEISMADC 174
Cdd:COG0625  81 PLLPADPAARARVRQWLAWADGDLHPALRNLLerLAPEKDPAAIARARAELARLLAVLEARL--AGGPYLAGDRFSIADI 158
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*
gi 11133618 175 CLVPQVFNARRFHVDLRPYPIILRIDRELESNPAFRAAHPSNQPD 219
Cdd:COG0625 159 ALAPVLRRLDRLGLDLADYPNLAAWLARLAARPAFQRALAAAEPD 203
GST_N_Zeta cd03042
GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
16-90 9.95e-41

GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.


Pssm-ID: 239340 [Multi-domain]  Cd Length: 73  Bit Score: 133.85  E-value: 9.95e-41
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 11133618  16 PILYSYWRSSCSWRVRIAMNLKEIPYDIKPISLIKsgGEQHCNEYREVNPMEQVPALQIDGHTLIESVAIMHYLE 90
Cdd:cd03042   1 MILYSYFRSSASYRVRIALNLKGLDYEYVPVNLLK--GEQLSPAYRALNPQGLVPTLVIDGLVLTQSLAIIEYLD 73
GST_N_family cd00570
Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic ...
16-90 1.02e-21

Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Based on sequence similarity, different classes of GSTs have been identified, which display varying tissue distribution, substrate specificities and additional specific activities. In humans, GSTs display polymorphisms which may influence individual susceptibility to diseases such as cancer, arthritis, allergy and sclerosis. Some GST family members with non-GST functions include glutaredoxin 2, the CLIC subfamily of anion channels, prion protein Ure2p, crystallins, metaxin 2 and stringent starvation protein A.


Pssm-ID: 238319 [Multi-domain]  Cd Length: 71  Bit Score: 84.93  E-value: 1.02e-21
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 11133618  16 PILYSYWRSSCSWRVRIAMNLKEIPYDIKPISLikSGGEQHcnEYREVNPMEQVPALQIDGHTLIESVAIMHYLE 90
Cdd:cd00570   1 LKLYYFPGSPRSLRVRLALEEKGLPYELVPVDL--GEGEQE--EFLALNPLGKVPVLEDGGLVLTESLAILEYLA 71
PRK15113 PRK15113
glutathione transferase;
30-112 1.16e-17

glutathione transferase;


Pssm-ID: 185068 [Multi-domain]  Cd Length: 214  Bit Score: 78.08  E-value: 1.16e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618   30 VRIAMNLKEIPYDIKPISLikSGGEQHCNEYREVNPMEQVPALQIDGHTLIESVAIMHYLEETRPQ---RPLLPQDVHKR 106
Cdd:PRK15113  22 AFVALQEKGLPFELKTVDL--DAGEHLQPTYQGYSLTRRVPTLQHDDFELSESSAIAEYLEERFAPpawERIYPADLQAR 99

                 ....*.
gi 11133618  107 AKVREI 112
Cdd:PRK15113 100 ARARQI 105
GST_N_4 cd03056
GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with ...
17-89 5.15e-16

GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.


Pssm-ID: 239354 [Multi-domain]  Cd Length: 73  Bit Score: 69.91  E-value: 5.15e-16
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 11133618  17 ILYSYWRSSCSWRVRIAMNLKEIPYDIKPISLIKsgGEQHCNEYREVNPMEQVPALQIDGHTLIESVAIMHYL 89
Cdd:cd03056   2 KLYGFPLSGNCYKVRLLLALLGIPYEWVEVDILK--GETRTPEFLALNPNGEVPVLELDGRVLAESNAILVYL 72
GST_N_2 pfam13409
Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.
24-92 1.08e-15

Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.


Pssm-ID: 433184 [Multi-domain]  Cd Length: 68  Bit Score: 69.20  E-value: 1.08e-15
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618    24 SSCSWRVRIAMNLKEIPYDIKPISLIksgGEQHCNEYREVNPMEQVPALQ-IDGHTLIESVAIMHYLEET 92
Cdd:pfam13409   2 SPFSHRVRLALEEKGLPYEIELVDLD---PKDKPPELLALNPLGTVPVLVlPDGTVLTDSLVILEYLEEL 68
GST_N_3 pfam13417
Glutathione S-transferase, N-terminal domain;
18-97 1.46e-14

Glutathione S-transferase, N-terminal domain;


Pssm-ID: 433190 [Multi-domain]  Cd Length: 75  Bit Score: 66.10  E-value: 1.46e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618    18 LYSYWRSSCSWRVRIAMNLKEIPYDIKPISLiksggEQHCNEYREVNPMEQVPALQIDGHTLIESVAIMHYLEETRPQRP 97
Cdd:pfam13417   1 LYGFPGSPYARRVRIALNEKGLPYEFVPIPP-----GDHPPELLAKNPLGKVPVLEDDGGILCESLAIIDYLEELYPGPP 75
GST_N_GTT1_like cd03046
GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly ...
16-94 5.79e-14

GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pombe GST-III is implicated in the detoxification of various metals.


Pssm-ID: 239344 [Multi-domain]  Cd Length: 76  Bit Score: 64.83  E-value: 5.79e-14
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 11133618  16 PILYsYWRSSCSWRVRIAMNLKEIPYDIKPISLikSGGEQHCNEYREVNPMEQVPALQIDGHTLIESVAIMHYLEETRP 94
Cdd:cd03046   1 ITLY-HLPRSRSFRILWLLEELGLPYELVLYDR--GPGEQAPPEYLAINPLGKVPVLVDGDLVLTESAAIILYLAEKYG 76
GST_N_Phi cd03053
GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related ...
16-91 7.84e-14

GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including transport of flavonoid pigments to the vacuole, shoot regeneration and GSH peroxidase activity.


Pssm-ID: 239351 [Multi-domain]  Cd Length: 76  Bit Score: 64.21  E-value: 7.84e-14
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 11133618  16 PILYSYWRSSCSWRVRIAMNLKEIPYDIKPISLikSGGEQHCNEYREVNPMEQVPALQIDGHTLIESVAIMHYLEE 91
Cdd:cd03053   2 LKLYGAAMSTCVRRVLLCLEEKGVDYELVPVDL--TKGEHKSPEHLARNPFGQIPALEDGDLKLFESRAITRYLAE 75
GST_N_Beta cd03057
GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
18-94 5.93e-13

GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.


Pssm-ID: 239355 [Multi-domain]  Cd Length: 77  Bit Score: 62.17  E-value: 5.93e-13
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 11133618  18 LYsYWRSSCSWRVRIAMNLKEIPYDIKPISLikSGGEQHCNEYREVNPMEQVPALQI-DGHTLIESVAIMHYLEETRP 94
Cdd:cd03057   3 LY-YSPGACSLAPHIALEELGLPFELVRVDL--RTKTQKGADYLAINPKGQVPALVLdDGEVLTESAAILQYLADLHP 77
GST_N_Ure2p_like cd03048
GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related ...
17-92 6.07e-13

GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and Schizosaccharomyces pombe GST-I. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes.


Pssm-ID: 239346 [Multi-domain]  Cd Length: 81  Bit Score: 62.18  E-value: 6.07e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618  17 ILYSyWRSSCSWRVRIAMNLKEIPYDIKPISLIKsgGEQHCNEYREVNPMEQVPALqID----GHTLIESVAIMHYLEET 92
Cdd:cd03048   3 TLYT-HGTPNGFKVSIMLEELGLPYEIHPVDISK--GEQKKPEFLKINPNGRIPAI-VDhngtPLTVFESGAILLYLAEK 78
GST_N pfam02798
Glutathione S-transferase, N-terminal domain; Function: conjugation of reduced glutathione to ...
17-91 9.21e-13

Glutathione S-transferase, N-terminal domain; Function: conjugation of reduced glutathione to a variety of targets. Also included in the alignment, but not GSTs: S-crystallins from squid (similarity to GST previously noted); eukaryotic elongation factors 1-gamma (not known to have GST activity and similarity not previously recognized); HSP26 family of stress-related proteins including auxin-regulated proteins in plants and stringent starvation proteins in E. coli (not known to have GST activity and similarity not previously recognized). The glutathione molecule binds in a cleft between the N- and C-terminal domains - the catalytically important residues are proposed to reside in the N-terminal domain.


Pssm-ID: 460698 [Multi-domain]  Cd Length: 76  Bit Score: 61.55  E-value: 9.21e-13
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 11133618    17 ILYSYWRSSCSWRVRIAMNLKEIPYDIKPISLIKsgGEQHCNEYREVNPMEQVPALQIDGHTLIESVAIMHYLEE 91
Cdd:pfam02798   4 TLYGIRGSPRAHRIRWLLAEKGVEYEIVPLDFGA--GPEKSPELLKLNPLGKVPALEDGGKKLTESRAILEYIAR 76
GST_N_GTT2_like cd03051
GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly ...
18-90 2.82e-12

GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.


Pssm-ID: 239349 [Multi-domain]  Cd Length: 74  Bit Score: 60.00  E-value: 2.82e-12
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 11133618  18 LYSYWRSSCSWRVRIAMNLKEIPYDIKPISLIKsgGEQHCNEYREVNPMEQVPALQIDGHTLI-ESVAIMHYLE 90
Cdd:cd03051   3 LYDSPTAPNPRRVRIFLAEKGIDVPLVTVDLAA--GEQRSPEFLAKNPAGTVPVLELDDGTVItESVAICRYLE 74
GST_N_Theta cd03050
GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial ...
30-89 3.24e-12

GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DCM as sole carbon and energy sources. The presence of polymorphisms in human GSTT1-1 and its relationship to the onset of diseases including cancer is subject of many studies. Human GSTT2-2 exhibits a highly specific sulfatase activity, catalyzing the cleavage of sulfate ions from aralkyl sufate esters, but not from aryl or alkyl sulfate esters.


Pssm-ID: 239348 [Multi-domain]  Cd Length: 76  Bit Score: 59.95  E-value: 3.24e-12
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618  30 VRIAMNLKEIPYDIKPISLIKsgGEQHCNEYREVNPMEQVPALQIDGHTLIESVAIMHYL 89
Cdd:cd03050  15 VYIFLKLNKIPFEECPIDLRK--GEQLTPEFKKINPFGKVPAIVDGDFTLAESVAILRYL 72
PLN02395 PLN02395
glutathione S-transferase
25-178 1.10e-11

glutathione S-transferase


Pssm-ID: 166036 [Multi-domain]  Cd Length: 215  Bit Score: 61.80  E-value: 1.10e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618   25 SCSWRVRIAMNLKEIPYDIKPISLIKsgGEQHCNEYREVNPMEQVPALQIDGHTLIESVAIMHYL-EETRPQRP-LLPQD 102
Cdd:PLN02395  11 ASPKRALVTLIEKGVEFETVPVDLMK--GEHKQPEYLALQPFGVVPVIVDGDYKIFESRAIMRYYaEKYRSQGPdLLGKT 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618  103 VHKRAKVREIVEIICSGIQP-LQNLIVLIHVG-------EEKKKEWAQHWITRGFRAVEKALSTSagKYCVGDEISMADC 174
Cdd:PLN02395  89 IEERGQVEQWLDVEATSYHPpLLNLTLHILFAskmgfpaDEKVIKESEEKLAKVLDVYEARLSKS--KYLAGDFVSLADL 166

                 ....
gi 11133618  175 CLVP 178
Cdd:PLN02395 167 AHLP 170
PRK10542 PRK10542
glutathionine S-transferase; Provisional
59-100 1.32e-07

glutathionine S-transferase; Provisional


Pssm-ID: 182533 [Multi-domain]  Cd Length: 201  Bit Score: 50.07  E-value: 1.32e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 11133618   59 EYREVNPMEQVPALQIDGHTLI-ESVAIMHYLEETRPQRPLLP 100
Cdd:PRK10542  42 DYLAINPKGQVPALLLDDGTLLtEGVAIMQYLADSVPDRQLLA 84
GST_N_Delta_Epsilon cd03045
GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved ...
16-91 4.08e-07

GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.


Pssm-ID: 239343 [Multi-domain]  Cd Length: 74  Bit Score: 46.06  E-value: 4.08e-07
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 11133618  16 PILYSYWRSSCSWRVRIAMNLKEIPYDIKPISLIKsgGEQHCNEYREVNPMEQVPALQIDGHTLIESVAIMHYLEE 91
Cdd:cd03045   1 IDLYYLPGSPPCRAVLLTAKALGLELNLKEVNLMK--GEHLKPEFLKLNPQHTVPTLVDNGFVLWESHAILIYLVE 74
GST_C_family cd00299
C-terminal, alpha helical domain of the Glutathione S-transferase family; Glutathione ...
109-194 2.64e-06

C-terminal, alpha helical domain of the Glutathione S-transferase family; Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Based on sequence similarity, different classes of GSTs have been identified, which display varying tissue distribution, substrate specificities and additional specific activities. In humans, GSTs display polymorphisms which may influence individual susceptibility to diseases such as cancer, arthritis, allergy and sclerosis. Some GST family members with non-GST functions include glutaredoxin 2, the CLIC subfamily of anion channels, prion protein Ure2p, crystallins, metaxins, stringent starvation protein A, and aminoacyl-tRNA synthetases.


Pssm-ID: 198286 [Multi-domain]  Cd Length: 100  Bit Score: 44.80  E-value: 2.64e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618 109 VREIVEIICSGIQPLQNLIVLIHVG----EEKKKEWAQHWITRGFRAVEKALSTsaGKYCVGDEISMADCCLVPQVFNAR 184
Cdd:cd00299   1 VRALEDWADATLAPPLVRLLYLEKVplpkDEAAVEAAREELPALLAALEQLLAG--RPYLAGDQFSLADVALAPVLARLE 78
                        90
                ....*....|...
gi 11133618 185 RFHV---DLRPYP 194
Cdd:cd00299  79 ALGPyydLLDEYP 91
GST_N_Tau cd03058
GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
17-92 6.45e-06

GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin, responses to soil stresses and responses to auxin and cytokinin hormones.


Pssm-ID: 239356 [Multi-domain]  Cd Length: 74  Bit Score: 42.65  E-value: 6.45e-06
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 11133618  17 ILYSYWRSSCSWRVRIAMNLKEIPYDIKPISLIKSGgeqhcNEYREVNPM-EQVPALQIDGHTLIESVAIMHYLEET 92
Cdd:cd03058   2 KLLGAWASPFVLRVRIALALKGVPYEYVEEDLGNKS-----ELLLASNPVhKKIPVLLHNGKPICESLIIVEYIDEA 73
PRK10357 PRK10357
putative glutathione S-transferase; Provisional
62-185 9.25e-06

putative glutathione S-transferase; Provisional


Pssm-ID: 182405 [Multi-domain]  Cd Length: 202  Bit Score: 44.71  E-value: 9.25e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618   62 EVNPMEQVPALQID-GHTLIESVAIMHYLEETRPQRPLLPQDVHKRAKVREIvEIICSGIQPLQNLIVlihvgEEKKKEW 140
Cdd:PRK10357  42 QYNPLGKVPALVTEeGECWFDSPIIAEYIELLNVAPAMLPRDPLAALRVRQL-EALADGIMDAALVSV-----REQARPA 115
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 11133618  141 AQ---HW-------ITRGFRAVEKALSTSAGKycvGDEISMAD----CCLvpQVFNARR 185
Cdd:PRK10357 116 AQqseDEllrqrekINRSLDALEGYLVDGTLK---TDTVNLATiaiaCAV--GYLNFRR 169
GST_N_etherase_LigE cd03038
GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas ...
28-94 5.87e-05

GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.


Pssm-ID: 239336 [Multi-domain]  Cd Length: 84  Bit Score: 40.41  E-value: 5.87e-05
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618  28 WRVRIAMNLKEIPYDIKPISL--IKSGGEQHcneyrEVNPMEQVPALQ-IDGHTLIESVAIMHYLEETRP 94
Cdd:cd03038  20 WKTRLALNHKGLEYKTVPVEFpdIPPILGEL-----TSGGFYTVPVIVdGSGEVIGDSFAIAEYLEEAYP 84
GST_C_Beta cd03188
C-terminal, alpha helical domain of Class Beta Glutathione S-transferases; Glutathione ...
133-213 3.25e-04

C-terminal, alpha helical domain of Class Beta Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they are involved in the protection against oxidative stress and are able to bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs, contributing to antibiotic resistance. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH. One member of this subfamily is a GST from Burkholderia xenovorans LB400 that is encoded by the bphK gene and is part of the biphenyl catabolic pathway.


Pssm-ID: 198297 [Multi-domain]  Cd Length: 113  Bit Score: 39.15  E-value: 3.25e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618 133 GEEKKKEWAQHWITRGFRAVEKALStsAGKYCVGDEISMADCCLVPQVFNARRFHVDLRPYPIILRIDRELESNPAFRAA 212
Cdd:cd03188  35 LAEEVKAAARERLERRLAYLDAQLA--GGPYLLGDQFSVADAYLFVVLRWARAVGLDLSDWPHLAAYLARVAARPAVQAA 112

                .
gi 11133618 213 H 213
Cdd:cd03188 113 L 113
GST_N_EF1Bgamma cd03044
GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part ...
18-89 6.45e-04

GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in protein biosynthesis, EF1Bgamma may also display other functions. The recombinant rice protein has been shown to possess GSH conjugating activity. The yeast EF1Bgamma binds membranes in a calcium dependent manner and is also part of a complex that binds to the msrA (methionine sulfoxide reductase) promoter suggesting a function in the regulation of its gene expression.


Pssm-ID: 239342 [Multi-domain]  Cd Length: 75  Bit Score: 37.23  E-value: 6.45e-04
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 11133618  18 LYSYWRSSCSWRVRIAMNLKEIPYDIKPIsliKSGGEQHCNEYREVNPMEQVPALQI-DGHTLIESVAIMHYL 89
Cdd:cd03044   3 LYTYPGNPRSLKILAAAKYNGLDVEIVDF---QPGKENKTPEFLKKFPLGKVPAFEGaDGFCLFESNAIAYYV 72
sspA PRK09481
stringent starvation protein A; Provisional
62-178 6.75e-04

stringent starvation protein A; Provisional


Pssm-ID: 236537 [Multi-domain]  Cd Length: 211  Bit Score: 39.31  E-value: 6.75e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618   62 EVNPMEQVPALQIDGHTLIESVAIMHYLEETRPQRPLLPQDVHKRAKVREIVEIICSGIQPLQNLIVlihVGEEKKKEWA 141
Cdd:PRK09481  52 DLNPYQSVPTLVDRELTLYESRIIMEYLDERFPHPPLMPVYPVARGESRLMMHRIEKDWYSLMNKIV---NGSASEADAA 128
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 11133618  142 QHWITRGFRAVEKALSTSAgkYCVGDEISMADCCLVP 178
Cdd:PRK09481 129 RKQLREELLAIAPVFGEKP--YFMSEEFSLVDCYLAP 163
GST_N_Sigma_like cd03039
GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, ...
30-89 1.02e-03

GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma members include the class II insect GSTs, S-crystallins from cephalopods and 28-kDa GSTs from parasitic flatworms. Drosophila GST2 is associated with indirect flight muscle and exhibits preference for catalyzing GSH conjugation to lipid peroxidation products, indicating an anti-oxidant role. S-crystallin constitutes the major lens protein in cephalopod eyes and is responsible for lens transparency and proper refractive index. The 28-kDa GST from Schistosoma is a multifunctional enzyme, exhibiting GSH transferase, GSH peroxidase and PGD2 synthase activities, and may play an important role in host-parasite interactions. Also members are novel GSTs from the fungus Cunninghamella elegans, designated as class Gamma, and from the protozoan Blepharisma japonicum, described as a light-inducible GST.


Pssm-ID: 239337 [Multi-domain]  Cd Length: 72  Bit Score: 36.76  E-value: 1.02e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 11133618  30 VRIAMNLKEIPYDIKPISliksGGEQHCNEYREVNPMEQVPALQIDGHTLIESVAIMHYL 89
Cdd:cd03039  15 IRLLLADAGVEYEDVRIT----YEEWPELDLKPTLPFGQLPVLEIDGKKLTQSNAILRYL 70
GST_N_Omega_like cd03060
GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to ...
16-88 1.29e-03

GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism.


Pssm-ID: 239358 [Multi-domain]  Cd Length: 71  Bit Score: 36.18  E-value: 1.29e-03
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 11133618  16 PILYSYWRSSCSWRVRIAMNLKEIPYDIKPISLiksggEQHCNEYREVNPMEQVPALQIDGHTLI-ESVAIMHY 88
Cdd:cd03060   1 PILYSFRRCPYAMRARMALLLAGITVELREVEL-----KNKPAEMLAASPKGTVPVLVLGNGTVIeESLDIMRW 69
GST_N_SspA cd03059
GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP) ...
18-91 2.56e-03

GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.


Pssm-ID: 239357 [Multi-domain]  Cd Length: 73  Bit Score: 35.38  E-value: 2.56e-03
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 11133618  18 LYSYWRSSCSWRVRIAMNLKEIPYDIKPISLiksggEQHCNEYREVNPMEQVPALQIDGHTLIESVAIMHYLEE 91
Cdd:cd03059   3 LYSGPDDVYSHRVRIVLAEKGVSVEIIDVDP-----DNPPEDLAELNPYGTVPTLVDRDLVLYESRIIMEYLDE 71
GST_C_3 pfam14497
Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.
134-194 2.98e-03

Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.


Pssm-ID: 464190 [Multi-domain]  Cd Length: 104  Bit Score: 35.99  E-value: 2.98e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 11133618   134 EEKKKEWAQHWITRGFRAVEKALSTSAGKYCVGDEISMADCCLVpQVFNARRFHVD---LRPYP 194
Cdd:pfam14497  20 AKRRKEFREERLPKFLGYFEKVLNKNGGGYLVGDKLTYADLALF-QVLDGLLYPKApdaLDKYP 82
GST_C_8 cd03207
C-terminal, alpha helical domain of an unknown subfamily 8 of Glutathione S-transferases; ...
144-208 6.62e-03

C-terminal, alpha helical domain of an unknown subfamily 8 of Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 8; composed of Agrobacterium tumefaciens GST and other uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The three-dimensional structure of Agrobacterium tumefaciens GST has been determined but there is no information on its functional characterization.


Pssm-ID: 198316 [Multi-domain]  Cd Length: 101  Bit Score: 34.96  E-value: 6.62e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 11133618 144 WITRGFRAVEKALStsAGKYCVGDEISMADCCLVPQVFNARRFHvDLRPYPIILR-IDReLESNPA 208
Cdd:cd03207  40 DLDERLAALEAALA--GRPYLVGERFSAADLLLASVLRWARAFG-LLPEYPALRAyVAR-CTARPA 101
GST_N_3 cd03049
GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with ...
63-90 8.35e-03

GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.


Pssm-ID: 239347 [Multi-domain]  Cd Length: 73  Bit Score: 34.16  E-value: 8.35e-03
                        10        20
                ....*....|....*....|....*....
gi 11133618  63 VNPMEQVPALQI-DGHTLIESVAIMHYLE 90
Cdd:cd03049  45 VNPLGKIPALVLdDGEALFDSRVICEYLD 73
GST_N_Omega cd03055
GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
26-90 8.64e-03

GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega GST genes may be associated with the development of some types of cancer and the age-at-onset of both Alzheimer's and Parkinson's diseases.


Pssm-ID: 239353 [Multi-domain]  Cd Length: 89  Bit Score: 34.64  E-value: 8.64e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 11133618  26 CSW--RVRIAMNLKEIPYDIKPISLIKSGgeqhcNEYREVNPMEQVPALQID-GHTLIESVAIMHYLE 90
Cdd:cd03055  27 CPYaqRARLVLAAKNIPHEVININLKDKP-----DWFLEKNPQGKVPALEIDeGKVVYESLIICEYLD 89
GST_C_Alpha cd03208
C-terminal, alpha helical domain of Class Alpha Glutathione S-transferases; Glutathione ...
108-177 9.22e-03

C-terminal, alpha helical domain of Class Alpha Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the GSH conjugation of alkenals.


Pssm-ID: 198317 [Multi-domain]  Cd Length: 135  Bit Score: 35.38  E-value: 9.22e-03
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 11133618 108 KVREIVEIICSGIQPLQNLIVLIHV--GEEKKKEWA---QHWITRGFRAVEKALSTSAGKYCVGDEISMADCCLV 177
Cdd:cd03208   2 KERALIDMYVEGTADLMEMIMMLPFlpPEEKEAKLAlikEKAKNRYFPVFEKVLKDHGQDFLVGNKLSRADVQLL 76
GST_C_2 pfam13410
Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.
147-198 9.95e-03

Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.


Pssm-ID: 433185 [Multi-domain]  Cd Length: 67  Bit Score: 33.83  E-value: 9.95e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 11133618   147 RGFRAVEKALSTSAgkYCVGDEISMADCCLVPQV--FNARRFHVDLR-PYPIILR 198
Cdd:pfam13410  11 AALDALEARLADGP--GLLGDRPTLADIALAPVLarLDAAYPGLDLReGYPRLRA 63
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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