NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|75274615|sp|Q9SE97|]
View 

RecName: Full=Formin-like protein 1; Short=AtFH1; Short=AtFORMIN-8; Flags: Precursor

Protein Classification

FH2 domain-containing protein( domain architecture ID 10490182)

FH2 domain-containing protein similar to formin homology proteins that control rearrangements of the actin cytoskeleton, especially in the context of cytokinesis and cell polarization

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
FH2 pfam02181
Formin Homology 2 Domain;
591-985 3.02e-150

Formin Homology 2 Domain;


:

Pssm-ID: 396655  Cd Length: 372  Bit Score: 451.72  E-value: 3.02e-150
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615    591 EETPKPKLKALHWDKVRASSDREMVWDHLRSSSFKLDEEMIETLFVAKSLNNKPNQSQTTPRCVLPSPNQENRVLDPKKA 670
Cdd:pfam02181    4 TPKPKKKLKPLHWDKVRPSQDRGTVWDKLDDESFELDGDLSELEELFSAKAKTKKNKKSEDKSSSKKKPKEVSLLDPKRA 83
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615    671 QNIAILLRALNVTIEEVCEALLEGNADTLGTELLESLLKMAPTKEEERKLKAYNDDsPVKLGHAEKFLKAMLDIPFAFKR 750
Cdd:pfam02181   84 QNIAILLRKLKLPPEEIIQAILEGDEDALDLELLENLLKMAPTKEELKKLKEYKGD-PSELGRAEQFLLELSKIPRLEAR 162
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615    751 VDAMLYVANFESEVEYLKKSFETLEAACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGK 830
Cdd:pfam02181  163 LRALLFKSTFEEEIEELKPSLEALEAASEELRNSRKFKKLLELILALGNYMNDGTRRGQAKGFKLSSLLKLSDTKSTDNK 242
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615    831 TTLLHFVVQEIIRaegtrlsgnntqtddikcrklGLQVVSSLCSELSNVKKAAAMDSEVLSSYVSKLSQGIAKINEAIQV 910
Cdd:pfam02181  243 TTLLHYLVKIIRE---------------------KFPEVLDFSSELSHVKKAAKVNLEQLEKDVKQLERGLKKLERELEL 301
                          330       340       350       360       370       380       390
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 75274615    911 QStiTEESNSQRFSESMKTFLKRAEEEIIRVQAQESVALSLVKEITEYFhgNSAKEEAHPFRIFLVVRDFLGVVD 985
Cdd:pfam02181  302 SA--LDEHPDDKFREVLKEFLKSAEEKLDKLESLLREALELFKELVEYF--GEDPKETSPEEFFKILRDFLKEFK 372
 
Name Accession Description Interval E-value
FH2 pfam02181
Formin Homology 2 Domain;
591-985 3.02e-150

Formin Homology 2 Domain;


Pssm-ID: 396655  Cd Length: 372  Bit Score: 451.72  E-value: 3.02e-150
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615    591 EETPKPKLKALHWDKVRASSDREMVWDHLRSSSFKLDEEMIETLFVAKSLNNKPNQSQTTPRCVLPSPNQENRVLDPKKA 670
Cdd:pfam02181    4 TPKPKKKLKPLHWDKVRPSQDRGTVWDKLDDESFELDGDLSELEELFSAKAKTKKNKKSEDKSSSKKKPKEVSLLDPKRA 83
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615    671 QNIAILLRALNVTIEEVCEALLEGNADTLGTELLESLLKMAPTKEEERKLKAYNDDsPVKLGHAEKFLKAMLDIPFAFKR 750
Cdd:pfam02181   84 QNIAILLRKLKLPPEEIIQAILEGDEDALDLELLENLLKMAPTKEELKKLKEYKGD-PSELGRAEQFLLELSKIPRLEAR 162
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615    751 VDAMLYVANFESEVEYLKKSFETLEAACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGK 830
Cdd:pfam02181  163 LRALLFKSTFEEEIEELKPSLEALEAASEELRNSRKFKKLLELILALGNYMNDGTRRGQAKGFKLSSLLKLSDTKSTDNK 242
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615    831 TTLLHFVVQEIIRaegtrlsgnntqtddikcrklGLQVVSSLCSELSNVKKAAAMDSEVLSSYVSKLSQGIAKINEAIQV 910
Cdd:pfam02181  243 TTLLHYLVKIIRE---------------------KFPEVLDFSSELSHVKKAAKVNLEQLEKDVKQLERGLKKLERELEL 301
                          330       340       350       360       370       380       390
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 75274615    911 QStiTEESNSQRFSESMKTFLKRAEEEIIRVQAQESVALSLVKEITEYFhgNSAKEEAHPFRIFLVVRDFLGVVD 985
Cdd:pfam02181  302 SA--LDEHPDDKFREVLKEFLKSAEEKLDKLESLLREALELFKELVEYF--GEDPKETSPEEFFKILRDFLKEFK 372
FH2 smart00498
Formin Homology 2 Domain; FH proteins control rearrangements of the actin cytoskeleton, ...
591-992 2.97e-145

Formin Homology 2 Domain; FH proteins control rearrangements of the actin cytoskeleton, especially in the context of cytokinesis and cell polarisation. Members of this family have been found to interact with Rho-GTPases, profilin and other actin-assoziated proteins. These interactions are mediated by the proline-rich FH1 domain, usually located in front of FH2 (but not listed in SMART). Despite this cytosolic function, vertebrate formins have been assigned functions within the nucleus. A set of Formin-Binding Proteins (FBPs) has been shown to bind FH1 with their WW domain.


Pssm-ID: 214697 [Multi-domain]  Cd Length: 392  Bit Score: 439.48  E-value: 2.97e-145
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615     591 EETPKPKLKALHWDKVRASSDREMVWDHLRSSSfKLDEEMIETLFVAKSLNNKPNQSQTTPRCVLPSP-NQENRVLDPKK 669
Cdd:smart00498    3 EPKPKKKLKPLHWDKLNPSDLSGTVWDKIDEES-EGDLDELEELFSAKEKTKSASKDVSEKKSILKKKaSQEFKILDPKR 81
                            90       100       110       120       130       140       150       160
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615     670 AQNIAILLRALNVTIEEVCEALLEGNADTLGTELLESLLKMAPTKEEERKLKAYNDDSPVKLGHAEKFLKAMLDIPFAFK 749
Cdd:smart00498   82 SQNLAILLRKLHMSYEEIKEAILEGDEDVLSVDLLEQLLKYAPTKEELKKLREYKEEDPEELARAEQFLLLISNIPYLEE 161
                           170       180       190       200       210       220       230       240
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615     750 RVDAMLYVANFESEVEYLKKSFETLEAACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADG 829
Cdd:smart00498  162 RLNALLFKANFEEEVEDLKPQIEKVEAACEELRESKKFRKLLELILAIGNYMNGGSRRGQAYGFKLSSLLKLSDVKSADN 241
                           250       260       270       280       290       300       310       320
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615     830 KTTLLHFVVQEIIRAEgtrlsgnntqtddikcrKLGLQVVSSLCSELSNV----KKAAAMDSEVLSSYVSKLSQGIAKIN 905
Cdd:smart00498  242 KTTLLHFLVKIIRKKY-----------------LGGLSDPENLDDKFIEVmkpfLKAAKEKYDKLQKDLSDLKTRFEKLV 304
                           330       340       350       360       370       380       390       400
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615     906 EAIQVQ-STITEESNSQRFSESMKTFLKRAEEEIIRVQAQESVALSLVKEITEYFHGNSAKEEAHPFRIFLVVRDFLGVV 984
Cdd:smart00498  305 EYYGEDpKDTSPEEFFKDFNEFLKEFSKAAEENIKKEEEEEERRKKLVKETTEYEQSSSRQKERNPSMDFEVERDFLGVL 384

                    ....*...
gi 75274615     985 DRVCKEVG 992
Cdd:smart00498  385 DSLLEELG 392
 
Name Accession Description Interval E-value
FH2 pfam02181
Formin Homology 2 Domain;
591-985 3.02e-150

Formin Homology 2 Domain;


Pssm-ID: 396655  Cd Length: 372  Bit Score: 451.72  E-value: 3.02e-150
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615    591 EETPKPKLKALHWDKVRASSDREMVWDHLRSSSFKLDEEMIETLFVAKSLNNKPNQSQTTPRCVLPSPNQENRVLDPKKA 670
Cdd:pfam02181    4 TPKPKKKLKPLHWDKVRPSQDRGTVWDKLDDESFELDGDLSELEELFSAKAKTKKNKKSEDKSSSKKKPKEVSLLDPKRA 83
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615    671 QNIAILLRALNVTIEEVCEALLEGNADTLGTELLESLLKMAPTKEEERKLKAYNDDsPVKLGHAEKFLKAMLDIPFAFKR 750
Cdd:pfam02181   84 QNIAILLRKLKLPPEEIIQAILEGDEDALDLELLENLLKMAPTKEELKKLKEYKGD-PSELGRAEQFLLELSKIPRLEAR 162
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615    751 VDAMLYVANFESEVEYLKKSFETLEAACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGK 830
Cdd:pfam02181  163 LRALLFKSTFEEEIEELKPSLEALEAASEELRNSRKFKKLLELILALGNYMNDGTRRGQAKGFKLSSLLKLSDTKSTDNK 242
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615    831 TTLLHFVVQEIIRaegtrlsgnntqtddikcrklGLQVVSSLCSELSNVKKAAAMDSEVLSSYVSKLSQGIAKINEAIQV 910
Cdd:pfam02181  243 TTLLHYLVKIIRE---------------------KFPEVLDFSSELSHVKKAAKVNLEQLEKDVKQLERGLKKLERELEL 301
                          330       340       350       360       370       380       390
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 75274615    911 QStiTEESNSQRFSESMKTFLKRAEEEIIRVQAQESVALSLVKEITEYFhgNSAKEEAHPFRIFLVVRDFLGVVD 985
Cdd:pfam02181  302 SA--LDEHPDDKFREVLKEFLKSAEEKLDKLESLLREALELFKELVEYF--GEDPKETSPEEFFKILRDFLKEFK 372
FH2 smart00498
Formin Homology 2 Domain; FH proteins control rearrangements of the actin cytoskeleton, ...
591-992 2.97e-145

Formin Homology 2 Domain; FH proteins control rearrangements of the actin cytoskeleton, especially in the context of cytokinesis and cell polarisation. Members of this family have been found to interact with Rho-GTPases, profilin and other actin-assoziated proteins. These interactions are mediated by the proline-rich FH1 domain, usually located in front of FH2 (but not listed in SMART). Despite this cytosolic function, vertebrate formins have been assigned functions within the nucleus. A set of Formin-Binding Proteins (FBPs) has been shown to bind FH1 with their WW domain.


Pssm-ID: 214697 [Multi-domain]  Cd Length: 392  Bit Score: 439.48  E-value: 2.97e-145
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615     591 EETPKPKLKALHWDKVRASSDREMVWDHLRSSSfKLDEEMIETLFVAKSLNNKPNQSQTTPRCVLPSP-NQENRVLDPKK 669
Cdd:smart00498    3 EPKPKKKLKPLHWDKLNPSDLSGTVWDKIDEES-EGDLDELEELFSAKEKTKSASKDVSEKKSILKKKaSQEFKILDPKR 81
                            90       100       110       120       130       140       150       160
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615     670 AQNIAILLRALNVTIEEVCEALLEGNADTLGTELLESLLKMAPTKEEERKLKAYNDDSPVKLGHAEKFLKAMLDIPFAFK 749
Cdd:smart00498   82 SQNLAILLRKLHMSYEEIKEAILEGDEDVLSVDLLEQLLKYAPTKEELKKLREYKEEDPEELARAEQFLLLISNIPYLEE 161
                           170       180       190       200       210       220       230       240
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615     750 RVDAMLYVANFESEVEYLKKSFETLEAACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADG 829
Cdd:smart00498  162 RLNALLFKANFEEEVEDLKPQIEKVEAACEELRESKKFRKLLELILAIGNYMNGGSRRGQAYGFKLSSLLKLSDVKSADN 241
                           250       260       270       280       290       300       310       320
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615     830 KTTLLHFVVQEIIRAEgtrlsgnntqtddikcrKLGLQVVSSLCSELSNV----KKAAAMDSEVLSSYVSKLSQGIAKIN 905
Cdd:smart00498  242 KTTLLHFLVKIIRKKY-----------------LGGLSDPENLDDKFIEVmkpfLKAAKEKYDKLQKDLSDLKTRFEKLV 304
                           330       340       350       360       370       380       390       400
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75274615     906 EAIQVQ-STITEESNSQRFSESMKTFLKRAEEEIIRVQAQESVALSLVKEITEYFHGNSAKEEAHPFRIFLVVRDFLGVV 984
Cdd:smart00498  305 EYYGEDpKDTSPEEFFKDFNEFLKEFSKAAEENIKKEEEEEERRKKLVKETTEYEQSSSRQKERNPSMDFEVERDFLGVL 384

                    ....*...
gi 75274615     985 DRVCKEVG 992
Cdd:smart00498  385 DSLLEELG 392
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH