RecName: Full=Protein Abitram; AltName: Full=Actin-binding transcription modulator; AltName: Full=Protein Simiate
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| Biotinyl_lipoyl_domains super family | cl11404 | Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the ... |
115-171 | 3.74e-05 | ||
Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS). These domains transport CO2, acyl, or methylamine, respectively, between components of the complex/protein via a biotinyl or lipoyl group, which is covalently attached to a highly conserved lysine residue. The actual alignment was detected with superfamily member TIGR00527: Pssm-ID: 448245 Cd Length: 128 Bit Score: 41.36 E-value: 3.74e-05
|
||||||
| Name | Accession | Description | Interval | E-value | ||
| gcvH | TIGR00527 | glycine cleavage system H protein; This model represents the glycine cleavage system H protein, ... |
115-171 | 3.74e-05 | ||
glycine cleavage system H protein; This model represents the glycine cleavage system H protein, which shuttles the methylamine group of glycine from the P protein to the T protein. The mature protein is about 130 residues long and contains a lipoyl group covalently bound to a conserved Lys residue. The genome of Aquifex aeolicus contains one protein scoring above the trusted cutoff and clustering with other bacterial H proteins, and four more proteins clustering together and scoring below the trusted cutoff; it seems doubtful that all of these homologs are authentic H protein. The Chlamydial homolog of H protein is nearly as divergent as the Aquifex outgroup, is not accompanied by P and T proteins, is not included in the seed alignment, and consequently also scores below the trusted cutoff. [Energy metabolism, Amino acids and amines] Pssm-ID: 200024 Cd Length: 128 Bit Score: 41.36 E-value: 3.74e-05
|
||||||
| GCV_H | pfam01597 | Glycine cleavage H-protein; This is a family of glycine cleavage H-proteins, part of the ... |
110-172 | 3.91e-04 | ||
Glycine cleavage H-protein; This is a family of glycine cleavage H-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyzes the catabolism of glycine in eukaryotes. A lipoyl group is attached to a completely conserved lysine residue. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. Pssm-ID: 396258 Cd Length: 122 Bit Score: 38.47 E-value: 3.91e-04
|
||||||
| Name | Accession | Description | Interval | E-value | ||
| gcvH | TIGR00527 | glycine cleavage system H protein; This model represents the glycine cleavage system H protein, ... |
115-171 | 3.74e-05 | ||
glycine cleavage system H protein; This model represents the glycine cleavage system H protein, which shuttles the methylamine group of glycine from the P protein to the T protein. The mature protein is about 130 residues long and contains a lipoyl group covalently bound to a conserved Lys residue. The genome of Aquifex aeolicus contains one protein scoring above the trusted cutoff and clustering with other bacterial H proteins, and four more proteins clustering together and scoring below the trusted cutoff; it seems doubtful that all of these homologs are authentic H protein. The Chlamydial homolog of H protein is nearly as divergent as the Aquifex outgroup, is not accompanied by P and T proteins, is not included in the seed alignment, and consequently also scores below the trusted cutoff. [Energy metabolism, Amino acids and amines] Pssm-ID: 200024 Cd Length: 128 Bit Score: 41.36 E-value: 3.74e-05
|
||||||
| GCV_H | pfam01597 | Glycine cleavage H-protein; This is a family of glycine cleavage H-proteins, part of the ... |
110-172 | 3.91e-04 | ||
Glycine cleavage H-protein; This is a family of glycine cleavage H-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyzes the catabolism of glycine in eukaryotes. A lipoyl group is attached to a completely conserved lysine residue. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. Pssm-ID: 396258 Cd Length: 122 Bit Score: 38.47 E-value: 3.91e-04
|
||||||
| Blast search parameters | ||||
|
