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Conserved domains on  [gi|75170479|sp|Q9FGS5|]
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RecName: Full=High-affinity nitrate transporter 3.1; AltName: Full=Protein WOUND-RESPONSIVE 3; Flags: Precursor

Protein Classification

MFS transporter( domain architecture ID 11246577)

major facilitator superfamily (MFS) transporter facilitates the transport across cytoplasmic or internal membranes of one or more from a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NAR2 pfam16974
High-affinity nitrate transporter accessory, Ig-like domain; NAR2 is a family of plant ...
 29-173 4.57e-80

High-affinity nitrate transporter accessory, Ig-like domain; NAR2 is a family of plant proteins with a C-terminal transmembrane region that is an essential accessory for high-affinity nitrate uptake. This family works together with NRT2, a 12xTM family of proteins that is part of family MFS_1, pfam07690. NAR2 is also involved in the repression of lateral root initiation in response to high ratios of sucrose to nitrogen in the medium. Therefore the two component-system of NAR2 and NRT2 itself is likely to be involved in the signalling pathway that integrates nutritional cues for the regulation of lateral root architecture. The functional unit of the high-affinity nitrate influx complex is likely to be a tetramer, in Arabidopsis, made up of two subunits each of NRT2.1 and NAR2.1. This entry corresponds to an immunoglobulin-like domain.


:

Pssm-ID: 465324  Cd Length: 142  Bit Score: 235.33  E-value: 4.57e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75170479    29 FKELDKgALDVTTKPSregPGVVLDAGKDTLNITWTL-SSIGSKREAEFKIIKVKLCYAPPSQVDRPWRKTHDELFKDKT 107
Cdd:pfam16974   1 FSSLPK-TLVVTASPK---AGQVLHAGEDSITVTWSLnTSLPAGTDSAYKTVKVKLCYAPVSQVDRGWRKTVDDLKKDKT 76

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 75170479   108 CPHKIIAKPYDKTLQSTTWTLERDIPTGTYFVRAYAVDAIGHEVAYGQSTDDAKKTNLFSVQAISG 173
Cdd:pfam16974  77 CQFKIVTQPYAAANGSVTWTIERDIPTATYFVRAYAVDASGTEVAYGQSTDAAKTTNLFTVQAITG 142
 
Name Accession Description Interval E-value
NAR2 pfam16974
High-affinity nitrate transporter accessory, Ig-like domain; NAR2 is a family of plant ...
 29-173 4.57e-80

High-affinity nitrate transporter accessory, Ig-like domain; NAR2 is a family of plant proteins with a C-terminal transmembrane region that is an essential accessory for high-affinity nitrate uptake. This family works together with NRT2, a 12xTM family of proteins that is part of family MFS_1, pfam07690. NAR2 is also involved in the repression of lateral root initiation in response to high ratios of sucrose to nitrogen in the medium. Therefore the two component-system of NAR2 and NRT2 itself is likely to be involved in the signalling pathway that integrates nutritional cues for the regulation of lateral root architecture. The functional unit of the high-affinity nitrate influx complex is likely to be a tetramer, in Arabidopsis, made up of two subunits each of NRT2.1 and NAR2.1. This entry corresponds to an immunoglobulin-like domain.


Pssm-ID: 465324  Cd Length: 142  Bit Score: 235.33  E-value: 4.57e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75170479    29 FKELDKgALDVTTKPSregPGVVLDAGKDTLNITWTL-SSIGSKREAEFKIIKVKLCYAPPSQVDRPWRKTHDELFKDKT 107
Cdd:pfam16974   1 FSSLPK-TLVVTASPK---AGQVLHAGEDSITVTWSLnTSLPAGTDSAYKTVKVKLCYAPVSQVDRGWRKTVDDLKKDKT 76

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 75170479   108 CPHKIIAKPYDKTLQSTTWTLERDIPTGTYFVRAYAVDAIGHEVAYGQSTDDAKKTNLFSVQAISG 173
Cdd:pfam16974  77 CQFKIVTQPYAAANGSVTWTIERDIPTATYFVRAYAVDASGTEVAYGQSTDAAKTTNLFTVQAITG 142
 
Name Accession Description Interval E-value
NAR2 pfam16974
High-affinity nitrate transporter accessory, Ig-like domain; NAR2 is a family of plant ...
 29-173 4.57e-80

High-affinity nitrate transporter accessory, Ig-like domain; NAR2 is a family of plant proteins with a C-terminal transmembrane region that is an essential accessory for high-affinity nitrate uptake. This family works together with NRT2, a 12xTM family of proteins that is part of family MFS_1, pfam07690. NAR2 is also involved in the repression of lateral root initiation in response to high ratios of sucrose to nitrogen in the medium. Therefore the two component-system of NAR2 and NRT2 itself is likely to be involved in the signalling pathway that integrates nutritional cues for the regulation of lateral root architecture. The functional unit of the high-affinity nitrate influx complex is likely to be a tetramer, in Arabidopsis, made up of two subunits each of NRT2.1 and NAR2.1. This entry corresponds to an immunoglobulin-like domain.


Pssm-ID: 465324  Cd Length: 142  Bit Score: 235.33  E-value: 4.57e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75170479    29 FKELDKgALDVTTKPSregPGVVLDAGKDTLNITWTL-SSIGSKREAEFKIIKVKLCYAPPSQVDRPWRKTHDELFKDKT 107
Cdd:pfam16974   1 FSSLPK-TLVVTASPK---AGQVLHAGEDSITVTWSLnTSLPAGTDSAYKTVKVKLCYAPVSQVDRGWRKTVDDLKKDKT 76

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 75170479   108 CPHKIIAKPYDKTLQSTTWTLERDIPTGTYFVRAYAVDAIGHEVAYGQSTDDAKKTNLFSVQAISG 173
Cdd:pfam16974  77 CQFKIVTQPYAAANGSVTWTIERDIPTATYFVRAYAVDASGTEVAYGQSTDAAKTTNLFTVQAITG 142
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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