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Conserved domains on  [gi|47605546|sp|Q9DB20|]
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RecName: Full=ATP synthase subunit O, mitochondrial; AltName: Full=ATP synthase peripheral stalk subunit OSCP; AltName: Full=Oligomycin sensitivity conferral protein; Short=OSCP; Flags: Precursor

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 37-209 1.47e-53

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


:

Pssm-ID: 459714  Cd Length: 172  Bit Score: 169.24  E-value: 1.47e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546    37 IEGRYATALYSAASKEKKLDQVEKELLRVGQLL-KDPKVSLAVLNPYIKRTVKVKSLNDITKrEKFSPLTANLMNLLAEN 115
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALaENPDLAAFLSNPTISAEEKKALLLELFK-GLLSPLTLNFLKLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546   116 GRLGNTQGIISAFSTIMSVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLSPNQIlKLEIKTDPSIMGGMIVRIGEKYVD 195
Cdd:pfam00213  80 GRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKKKV-KLENKVDPSLIGGVVVRVGDKVID 158

                         170
                  ....*....|....
gi 47605546   196 MSAKSKIQKLSKAM 209
Cdd:pfam00213 159 GSVKGKLERLKRAL 172
 
Name Accession Description Interval E-value
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 37-209 1.47e-53

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 169.24  E-value: 1.47e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546    37 IEGRYATALYSAASKEKKLDQVEKELLRVGQLL-KDPKVSLAVLNPYIKRTVKVKSLNDITKrEKFSPLTANLMNLLAEN 115
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALaENPDLAAFLSNPTISAEEKKALLLELFK-GLLSPLTLNFLKLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546   116 GRLGNTQGIISAFSTIMSVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLSPNQIlKLEIKTDPSIMGGMIVRIGEKYVD 195
Cdd:pfam00213  80 GRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKKKV-KLENKVDPSLIGGVVVRVGDKVID 158

                         170
                  ....*....|....
gi 47605546   196 MSAKSKIQKLSKAM 209
Cdd:pfam00213 159 GSVKGKLERLKRAL 172
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 36-211 2.98e-43

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 142.99  E-value: 2.98e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546  36 GIEGRYATALYSAASKEKKLDQVEKELLRVGQLLK-DPKVSLAVLNPYIKRTVKVKSLNDITKrEKFSPLTANLMNLLAE 114
Cdd:COG0712   5 TIARRYAKALFELAKEKGALDEVEEELFALAALLAeNPELRALLSSPVISAEEKKELLEALFG-GKLSPETLNFLKLLVE 83

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546 115 NGRLGNTQGIISAFSTIMSVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLspNQILKLEIKTDPSIMGGMIVRIGEKYV 194
Cdd:COG0712  84 NGRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKT--GKKVELNVKVDPSLIGGVVVRVGDKVI 161

                       170
                ....*....|....*..
gi 47605546 195 DMSAKSKIQKLSKAMRE 211
Cdd:COG0712 162 DGSVRGRLNRLRRALKG 178
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 34-209 6.08e-37

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 126.82  E-value: 6.08e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546   34 VYGIEGRYATALYSAASKEKKLDQVEKELLRVGQLLKDPKVSLAVLNPYIKRTVKVKSLNDITKreKFSPLTANLMNLLA 113
Cdd:PRK05758   4 LSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFK--SLSEYVQNFLKVLA 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546  114 ENGRLGNTQGIISAFSTIMSVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLspNQILKLEIKTDPSIMGGMIVRIGEKY 193
Cdd:PRK05758  82 ENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRL--GRKVKLNEKVDPSLIGGVIIKVGDRV 159

                        170
                 ....*....|....*.
gi 47605546  194 VDMSAKSKIQKLSKAM 209
Cdd:PRK05758 160 IDGSVRGKLERLKDAL 175
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 40-209 6.65e-22

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 88.14  E-value: 6.65e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546    40 RYATALYSAASKEKKLDQVEKELLRVGQLLKDPKVSLAVL-NPYIKRTVKVKSLNDITKrEKFSPLTANLMNLLAENGRL 118
Cdd:TIGR01145   4 PYAKALFEIANEKSSLEEWGEMLNFVKEVLKNNKELKKFLsNPLISAEKKKEFIKNVFG-EQLDESSLNLLLLLAENGRL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546   119 GNTQGIISAFSTIMSVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLSPNQIlKLEIKTDPSIMGGMIVRIGEKYVDMSA 198
Cdd:TIGR01145  83 AALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAAKV-KLNCKVDKDLIGGVIIRIGDRVIDGSV 161

                         170
                  ....*....|.
gi 47605546   199 KSKIQKLSKAM 209
Cdd:TIGR01145 162 RGQLKRLSRQL 172
 
Name Accession Description Interval E-value
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 37-209 1.47e-53

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 169.24  E-value: 1.47e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546    37 IEGRYATALYSAASKEKKLDQVEKELLRVGQLL-KDPKVSLAVLNPYIKRTVKVKSLNDITKrEKFSPLTANLMNLLAEN 115
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALaENPDLAAFLSNPTISAEEKKALLLELFK-GLLSPLTLNFLKLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546   116 GRLGNTQGIISAFSTIMSVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLSPNQIlKLEIKTDPSIMGGMIVRIGEKYVD 195
Cdd:pfam00213  80 GRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKKKV-KLENKVDPSLIGGVVVRVGDKVID 158

                         170
                  ....*....|....
gi 47605546   196 MSAKSKIQKLSKAM 209
Cdd:pfam00213 159 GSVKGKLERLKRAL 172
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 36-211 2.98e-43

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 142.99  E-value: 2.98e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546  36 GIEGRYATALYSAASKEKKLDQVEKELLRVGQLLK-DPKVSLAVLNPYIKRTVKVKSLNDITKrEKFSPLTANLMNLLAE 114
Cdd:COG0712   5 TIARRYAKALFELAKEKGALDEVEEELFALAALLAeNPELRALLSSPVISAEEKKELLEALFG-GKLSPETLNFLKLLVE 83

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546 115 NGRLGNTQGIISAFSTIMSVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLspNQILKLEIKTDPSIMGGMIVRIGEKYV 194
Cdd:COG0712  84 NGRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKT--GKKVELNVKVDPSLIGGVVVRVGDKVI 161

                       170
                ....*....|....*..
gi 47605546 195 DMSAKSKIQKLSKAMRE 211
Cdd:COG0712 162 DGSVRGRLNRLRRALKG 178
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 34-209 6.08e-37

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 126.82  E-value: 6.08e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546   34 VYGIEGRYATALYSAASKEKKLDQVEKELLRVGQLLKDPKVSLAVLNPYIKRTVKVKSLNDITKreKFSPLTANLMNLLA 113
Cdd:PRK05758   4 LSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFK--SLSEYVQNFLKVLA 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546  114 ENGRLGNTQGIISAFSTIMSVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLspNQILKLEIKTDPSIMGGMIVRIGEKY 193
Cdd:PRK05758  82 ENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRL--GRKVKLNEKVDPSLIGGVIIKVGDRV 159

                        170
                 ....*....|....*.
gi 47605546  194 VDMSAKSKIQKLSKAM 209
Cdd:PRK05758 160 IDGSVRGKLERLKDAL 175
PRK13429 PRK13429
F0F1 ATP synthase subunit delta; Provisional
 40-205 1.86e-28

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237386  Cd Length: 181  Bit Score: 105.29  E-value: 1.86e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546   40 RYATALYSAASKEKKLDQVEKELLRVGQLLKD-PKVSLAVLNPYIKRTVKVKSLNDITKREKFSPLTANLMNLLAENGRL 118
Cdd:PRK13429   9 RYAKALFQLAKEKGQLDSVYEELKQLAELLEDsPELRDALSNPVLSAEEKKAVLEKLLGKLKVSPEVLNFLKLLADRRRL 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546  119 GNTQGIISAFSTIMSVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLspNQILKLEIKTDPSIMGGMIVRIGEKYVDMSA 198
Cdd:PRK13429  89 GILPEIAARYLELADEQKGIVRATVTSAVPLSEAQQEAIRQKLEKMT--GKKVELDTAVDPSLIGGVVVKIGDKVLDASV 166


                 ....*..
gi 47605546  199 KSKIQKL 205
Cdd:PRK13429 167 RTQLRRL 173
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 40-209 6.65e-22

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 88.14  E-value: 6.65e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546    40 RYATALYSAASKEKKLDQVEKELLRVGQLLKDPKVSLAVL-NPYIKRTVKVKSLNDITKrEKFSPLTANLMNLLAENGRL 118
Cdd:TIGR01145   4 PYAKALFEIANEKSSLEEWGEMLNFVKEVLKNNKELKKFLsNPLISAEKKKEFIKNVFG-EQLDESSLNLLLLLAENGRL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546   119 GNTQGIISAFSTIMSVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLSPNQIlKLEIKTDPSIMGGMIVRIGEKYVDMSA 198
Cdd:TIGR01145  83 AALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAAKV-KLNCKVDKDLIGGVIIRIGDRVIDGSV 161

                         170
                  ....*....|.
gi 47605546   199 KSKIQKLSKAM 209
Cdd:TIGR01145 162 RGQLKRLSRQL 172
atpD CHL00119
ATP synthase CF1 delta subunit; Validated
 41-207 3.31e-17

ATP synthase CF1 delta subunit; Validated


Pssm-ID: 177042  Cd Length: 184  Bit Score: 75.79  E-value: 3.31e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546   41 YATALYSAASKEKKLDQVEKELLRVGQLLKD-PKVSLAVLNPYIKRTVKVKSLNDITKrEKFSPLTANLMNLLAENGRLG 119
Cdd:CHL00119  12 YAEALLEFAKEKNIMEQITADIQLILTFLNEsPELKKFLANPLISKNAKKEVIKKTFG-SQINENTLKFLMVLVDRGRIA 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546  120 NTQGIISAFSTIMSVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLSPNQIlKLEIKTDPSIMGGMIVRIGEKYVDMSAK 199
Cdd:CHL00119  91 LLDAIIEKYLELVYKLASIKIAEVSTAVPLSSAQEEALIEKLKEMTNAKEI-KLVITVDPSLIGGFLIKIGSKVIDTSIK 169


                 ....*...
gi 47605546  200 SKIQKLSK 207
Cdd:CHL00119 170 GQLKQLAS 177
PRK13436 PRK13436
F0F1 ATP synthase subunit delta; Provisional
 41-211 6.43e-17

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184053  Cd Length: 179  Bit Score: 75.09  E-value: 6.43e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546   41 YATALYSAASKEKKLDQVEKELLRVGQLLKDPKVSLAVLNPY-IKRTVKVKSLNDITKrEKFSPLTANLMNLLAENGRLG 119
Cdd:PRK13436  11 YAEALFDIANEENNVEKYINEVFKIIEILKNNKDLIKLLTSYfIDKEEKFKIIDKIFS-AKIDIYLVNFLKILAKNNLFI 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546  120 NTQGIISAFSTIMSVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLSPNQILKLEIktDPSIMGGMIVRIGEKYVDMSAK 199
Cdd:PRK13436  90 YIKQILKKFVKLSNEKLNITYGEIYTTEPLSEVQISRFESKLSKKLNKKVHLVNKI--DPKLIAGIKIKVDNKVFENSIK 167

                        170
                 ....*....|..
gi 47605546  200 SKIQKLSKAMRE 211
Cdd:PRK13436 168 SKLKELKKQVLK 179
PRK13430 PRK13430
F0F1 ATP synthase subunit delta; Provisional
 34-209 2.08e-16

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237387 [Multi-domain]  Cd Length: 271  Bit Score: 75.37  E-value: 2.08e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546   34 VYGIEGRYATALYSAASKEKKLDQVEKELLRVGQ-LLKDPKVSLAVLNPYIKRTVKVKSLNDITKrEKFSPLTANLMNLL 112
Cdd:PRK13430  96 ADALEELGVRALLASAEAQGALDDVEDELFRLGRiLASNPELRLALSDRAAPAEAKRELLARLLY-GKVTPVTERLAEQA 174

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546  113 AENGRLGNTQGIISAFSTIMSVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLSpNQIlKLEIKTDPSIMGGMIVRIGEK 192
Cdd:PRK13430 175 VGRPRGRSIEEGLDELSNLAAARRGRSVATVTTAVPLSDEQKQRLAAALSRIYG-RPV-HLNSEVDPSVLGGMRVQVGDE 252

                        170
                 ....*....|....*..
gi 47605546  193 YVDMSAKSKIQKLSKAM 209
Cdd:PRK13430 253 VIDGSVAGRLERLRRRL 269
PRK13434 PRK13434
F0F1 ATP synthase subunit delta; Provisional
 36-211 1.49e-10

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 139571  Cd Length: 184  Bit Score: 58.02  E-value: 1.49e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546   36 GIEGRYATALYSAASKekkLDQVEKELLRVGQLL-KDPKVSLAVLNPYI----KRTVKVKSLnditkREKFSPLTANLMN 110
Cdd:PRK13434   5 GVSKVYASALLGAANS---PEEVEQELGDLVQLLfKDEKIRNFFLSPTVspeeKEQTLAKNL-----RGKISDITLNFLG 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546  111 LLAENGRLGNTQGIISAFSTIMSVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLSPNQILklEIKTDPSIMGGMIVRIG 190
Cdd:PRK13434  77 VLLNKGRFIYLPEIQKDFTVELDKKKGRVRAQIVSYPSLEPAQVDKLGSILSEKFKSEFIL--EVSEDKNLLGGFVVQFN 154

                        170       180
                 ....*....|....*....|.
gi 47605546  191 EKYVDMSAKSKIQKLSKAMRE 211
Cdd:PRK13434 155 DLKIEKSIASQLGEIKKAMLE 175
PRK13428 PRK13428
F0F1 ATP synthase subunit delta; Provisional
 34-204 3.68e-09

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184048 [Multi-domain]  Cd Length: 445  Bit Score: 55.51  E-value: 3.68e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546   34 VYGIEGRYATALYSAASKEKKLDQVEKELLRVGQLLkDPKVSLAVL-----NPYIKRTVKVKSLndITKREKFSPLTANL 108
Cdd:PRK13428 268 IDALEHVARLALLERAERAGQVDEVEDQLFRFSRIL-DAQPRLAILlsdytVPADGRVALLRKV--LGGASTVNPVTVAL 344

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546  109 MNLLAENGRLGNTQGIISAFSTIMSVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLSPNQILKLEIktDPSIMGGMIVR 188
Cdd:PRK13428 345 LSQTVELLRGQPAEEAVLFLAELAVARRGEVVAQVSAAAELSDAQRTRLTEVLSRIYGRPVSVQLHI--DPELLGGLSIA 422

                        170
                 ....*....|....*.
gi 47605546  189 IGEKYVDMSAKSKIQK 204
Cdd:PRK13428 423 VGDEVIDGTLSSRLAA 438
PRK13441 PRK13441
F0F1 ATP synthase subunit delta; Provisional
 37-207 7.03e-09

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184054  Cd Length: 180  Bit Score: 53.22  E-value: 7.03e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546   37 IEGRYATALYSAASKEKKldqvEKELLRVGQLLKDPKVSLAVL--NPYIKRTVKVKSLNDITK--REKFSPLTANLMNLL 112
Cdd:PRK13441   6 IASKYARALLNVAIELEK----EEEYGEFLDLVCQIYESAKEFfdNPIVKPEKKVSLIKEIMKefGQEMDEFFENFLNLV 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546  113 AENGRLGNTQGIISAFSTIMSVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLSPNQIlkLEIKTDPSIMGGMIVRIGEK 192
Cdd:PRK13441  82 FENKRQKLLPQIRALFEYEKILSEQKVPVNLTTAHELSDEELKLLRKFVRKYVLRDPV--FEETIDESLIAGAVVEFEGK 159

                        170
                 ....*....|....*
gi 47605546  193 YVDMSAKSKIQKLSK 207
Cdd:PRK13441 160 RLDVTVQGRLKKIAR 174
PRK08474 PRK08474
F0F1 ATP synthase subunit delta; Validated
 40-181 4.50e-07

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 236271  Cd Length: 176  Bit Score: 48.05  E-value: 4.50e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47605546   40 RYATALySAASKEKKLDQVEKELLRVGQLLKDPKVSLAVLNPYIKRTVKVKSLNDITKREkfSPLTANLMNLLAENGRLG 119
Cdd:PRK08474   8 RYAKAL-LSSLSSDELNDIYSNLKILSSAFADEKFKEIISSPEISKEQKIEFLLSFVDNA--NAKFQNFIKLLAENKRLE 84

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47605546  120 NTQGIISAFSTIMSVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLSPNQILKLEIKTDPSI 181
Cdd:PRK08474  85 LIPAIAKELERQIALKENEYVGVVYSNEKLSEETLKKLEEKLSKKFNAKIKLKQKKSDYDGI 146
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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