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Conserved domains on  [gi|81903547|sp|Q9CQE9|]
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RecName: Full=FLYWCH family member 2

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FLYWCH_N super family cl21248
FLYWCH-type zinc finger-containing protein; This family is the N-terminus of some ...
 1-106 5.45e-42

FLYWCH-type zinc finger-containing protein; This family is the N-terminus of some FLYWCH-zinc-finger proteins, found in eukaryotes. The family is found in association with pfam04500. There are two conserved sequence motifs: EQE and QEPS.


The actual alignment was detected with superfamily member pfam15423:

Pssm-ID: 405997  Cd Length: 107  Bit Score: 134.97  E-value: 5.45e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81903547     1 MPQPKPSEQEGESMKASQEPAPQPGTDVVPAAPRKPRKFSKLVLLTASKDSAKVAGAKRKGVHCIMSLGVPGPATLAKAL 80
Cdd:pfam15423   1 MPLPEPSEQEGESVKAGQEPSPEPGTDVVPAAPRKPREFSKLVLLTASDQSGDGVDSKPKEVHCVMSLEMSGPATLASTL 80

                          90       100
                  ....*....|....*....|....*..
gi 81903547    81 -LKTHPEAQRAIEATPLEPEQKRSKQN 106
Cdd:pfam15423  81 qILPAEEQGGAVQPAPQAPEQKRSKLD 107
 
Name Accession Description Interval E-value
FLYWCH_N pfam15423
FLYWCH-type zinc finger-containing protein; This family is the N-terminus of some ...
 1-106 5.45e-42

FLYWCH-type zinc finger-containing protein; This family is the N-terminus of some FLYWCH-zinc-finger proteins, found in eukaryotes. The family is found in association with pfam04500. There are two conserved sequence motifs: EQE and QEPS.


Pssm-ID: 405997  Cd Length: 107  Bit Score: 134.97  E-value: 5.45e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81903547     1 MPQPKPSEQEGESMKASQEPAPQPGTDVVPAAPRKPRKFSKLVLLTASKDSAKVAGAKRKGVHCIMSLGVPGPATLAKAL 80
Cdd:pfam15423   1 MPLPEPSEQEGESVKAGQEPSPEPGTDVVPAAPRKPREFSKLVLLTASDQSGDGVDSKPKEVHCVMSLEMSGPATLASTL 80

                          90       100
                  ....*....|....*....|....*..
gi 81903547    81 -LKTHPEAQRAIEATPLEPEQKRSKQN 106
Cdd:pfam15423  81 qILPAEEQGGAVQPAPQAPEQKRSKLD 107
 
Name Accession Description Interval E-value
FLYWCH_N pfam15423
FLYWCH-type zinc finger-containing protein; This family is the N-terminus of some ...
 1-106 5.45e-42

FLYWCH-type zinc finger-containing protein; This family is the N-terminus of some FLYWCH-zinc-finger proteins, found in eukaryotes. The family is found in association with pfam04500. There are two conserved sequence motifs: EQE and QEPS.


Pssm-ID: 405997  Cd Length: 107  Bit Score: 134.97  E-value: 5.45e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81903547     1 MPQPKPSEQEGESMKASQEPAPQPGTDVVPAAPRKPRKFSKLVLLTASKDSAKVAGAKRKGVHCIMSLGVPGPATLAKAL 80
Cdd:pfam15423   1 MPLPEPSEQEGESVKAGQEPSPEPGTDVVPAAPRKPREFSKLVLLTASDQSGDGVDSKPKEVHCVMSLEMSGPATLASTL 80

                          90       100
                  ....*....|....*....|....*..
gi 81903547    81 -LKTHPEAQRAIEATPLEPEQKRSKQN 106
Cdd:pfam15423  81 qILPAEEQGGAVQPAPQAPEQKRSKLD 107
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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