|
Name |
Accession |
Description |
Interval |
E-value |
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
249-892 |
9.27e-67 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 242.06 E-value: 9.27e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 249 LDLSQNKLVGHLPSCLTSLTGLRVLDLSSNKLTGTVPSSLGSL-QSLEYLSLFDNDFEGSFSFGSLANLSNLMVlklcsk 327
Cdd:PLN00113 74 IDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTsSSLRYLNLSNNNFTGSIPRGSIPNLETLDL------ 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 328 ssslqvlsesswkpkfqlsvialrSCNM--EKVPHFLLHQKDLRHVDLSDNNISGKLPSWLlANNTKLKVLLLQNNLFTS 405
Cdd:PLN00113 148 ------------------------SNNMlsGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSL-TNLTSLEFLTLASNQLVG 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 406 fQIPKS---AHNLLFLDVSANDFNHLFPENIGWIfPHLRYLNTSKNNFQENLPSSLGNMNGIQYMDLSRNSFHGNLPRSf 482
Cdd:PLN00113 203 -QIPRElgqMKSLKWIYLGYNNLSGEIPYEIGGL-TSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPS- 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 483 VNGCYSMAILKLSHNKLSGEIfPE---STNFTNILGLFMDNnlFTGKIGQGLRSLINLELLDMSNNNLTGVIPSWIGELP 559
Cdd:PLN00113 280 IFSLQKLISLDLSDNSLSGEI-PElviQLQNLEILHLFSNN--FTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHN 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 560 SLTALLISDNFLKGDIPMSLFNKSSLQLLDLSANSLSGVIPPQ-HDSRNGVVLLLQDNKLSGTIPD--TLLANVEILDLR 636
Cdd:PLN00113 357 NLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSlGACRSLRRVRLQDNSFSGELPSefTKLPLVYFLDIS 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 637 NNRFSGKIPEFI-NIQNISILLLRGNNFTGQIPhQLCGLSNIQLLDLSNNRLNGTIPSCLsntsfgfgkectsydydfgi 715
Cdd:PLN00113 437 NNNLQGRINSRKwDMPSLQMLSLARNKFFGGLP-DSFGSKRLENLDLSRNQFSGAVPRKL-------------------- 495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 716 sfpsdvfngfslhqdfssnknggiyfkslltldplsmdykaatqtkiefatkhrydaymgGNLKLLFGMDLSENELSGEI 795
Cdd:PLN00113 496 ------------------------------------------------------------GSLSELMQLKLSENKLSGEI 515
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 796 PVEFGGLLELRALNLSHNNLSGVIPKSISSMEKMESFDLSFNRLQGRIPSQLTELTSLSVFKVSHNNLSGVIPQGRQFNT 875
Cdd:PLN00113 516 PDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLA 595
|
650
....*....|....*..
gi 75333418 876 FDAESYFGNRLLCGQPT 892
Cdd:PLN00113 596 INASAVAGNIDLCGGDT 612
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
121-454 |
2.25e-22 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 100.78 E-value: 2.25e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 121 DVEGYKSLRKLRKLEILDLASNKFNnSIFHFLSAATSLTTLFLRSNNMDgSFPAkELRDLTNLELLDLSRNRFNgSIPiQ 200
Cdd:COG4886 102 DLSGNEELSNLTNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQLT-DLPE-PLGNLTNLKSLDLSNNQLT-DLP-E 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 201 ELSSLRKLKALDLSGNEFSgsmelqgkfctdllfSIQSGICELNNMQELDLSQNKLvGHLPSCLTSLTGLRVLDLSSNKL 280
Cdd:COG4886 177 ELGNLTNLKELDLSNNQIT---------------DLPEPLGNLTNLEELDLSGNQL-TDLPEPLANLTNLETLDLSNNQL 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 281 TgTVPSsLGSLQSLEYLSLFDNDFEGSFSFGSLANLSNLMVLKLCSKSSSLQVLSESSWKPKFQLSVIALRSCNMEKVPH 360
Cdd:COG4886 241 T-DLPE-LGNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLL 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 361 FLLHQ-KDLRHVDLSDNNISGKLPSWLLANNTKLKVLLLQNNLFTSFQIPKSAHNLLFLDVSANDFNHLFPENIGWIFPH 439
Cdd:COG4886 319 LLTTLlLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTA 398
|
330
....*....|....*
gi 75333418 440 LRYLNTSKNNFQENL 454
Cdd:COG4886 399 GVLLLTLALLDAVNT 413
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
105-287 |
1.22e-14 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 78.74 E-value: 1.22e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 105 VRSLNLSSSRCSGLFDDVEGykslrKLRKLEILDLASNKFNNSIFHFlSAATSLTTLFLRSNNMDGSFPAKeLRDLTNLE 184
Cdd:PLN00113 430 VYFLDISNNNLQGRINSRKW-----DMPSLQMLSLARNKFFGGLPDS-FGSKRLENLDLSRNQFSGAVPRK-LGSLSELM 502
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 185 LLDLSRNRFNGSIPiQELSSLRKLKALDLSGNEFSGSmelqgkfctdllfsIQSGICELNNMQELDLSQNKLVGHLPSCL 264
Cdd:PLN00113 503 QLKLSENKLSGEIP-DELSSCKKLVSLDLSHNQLSGQ--------------IPASFSEMPVLSQLDLSQNQLSGEIPKNL 567
|
170 180
....*....|....*....|...
gi 75333418 265 TSLTGLRVLDLSSNKLTGTVPSS 287
Cdd:PLN00113 568 GNVESLVQVNISHNHLHGSLPST 590
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
152-319 |
5.53e-09 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 57.49 E-value: 5.53e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 152 LSAATSLTTLFLRSNN---MDGsfpakeLRDLTNLELLDLSRNRFNgsiPIQELSSLRKLKALDLSGNEfsgsmelqgkf 228
Cdd:cd21340 20 LSLCKNLKVLYLYDNKitkIEN------LEFLTNLTHLYLQNNQIE---KIENLENLVNLKKLYLGGNR----------- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 229 ctdllFSIQSGICELNNMQELDLSQNKL-VGHL----PSCLTSLTG-LRVLDLSSNKLTGtvPSSLGSLQSLEYLSLFDN 302
Cdd:cd21340 80 -----ISVVEGLENLTNLEELHIENQRLpPGEKltfdPRSLAALSNsLRVLNISGNNIDS--LEPLAPLRNLEQLDASNN 152
|
170 180
....*....|....*....|.
gi 75333418 303 DFEG----SFSFGSLANLSNL 319
Cdd:cd21340 153 QISDleelLDLLSSWPSLREL 173
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
170-426 |
9.42e-07 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 51.97 E-value: 9.42e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 170 GSFPAKELRDLTNLELLDLSRNrFNGSIP------IQELSSLRKLKALDLSGNEFSGsmELQGkfctdLLFSIQSGicel 243
Cdd:cd00116 40 AKALASALRPQPSLKELCLSLN-ETGRIPrglqslLQGLTKGCGLQELDLSDNALGP--DGCG-----VLESLLRS---- 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 244 NNMQELDLSQNKL-VGHLPSCLTSLT----GLRVLDLSSNKLTGTVPSSLGSL----QSLEYLSLFDNDFEGS---FSFG 311
Cdd:cd00116 108 SSLQELKLNNNGLgDRGLRLLAKGLKdlppALEKLVLGRNRLEGASCEALAKAlranRDLKELNLANNGIGDAgirALAE 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 312 SLANLSNLMVLKLCSKssslqvlsesswkpkfqlsviALRSCNMEKVPHFLLHQKDLRHVDLSDNNISG----KLPSWLL 387
Cdd:cd00116 188 GLKANCNLEVLDLNNN---------------------GLTDEGASALAETLASLKSLEVLNLGDNNLTDagaaALASALL 246
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 75333418 388 ANNTKLKVLLLQNNLFTSF------QIPKSAHNLLFLDVSANDFN 426
Cdd:cd00116 247 SPNISLLTLSLSCNDITDDgakdlaEVLAEKESLLELDLRGNKFG 291
|
|
| LRRNT_2 |
pfam08263 |
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ... |
28-72 |
7.20e-06 |
|
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.
Pssm-ID: 462411 [Multi-domain] Cd Length: 41 Bit Score: 43.82 E-value: 7.20e-06
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 75333418 28 IDEEKIALFELRKHMisrTESESVLPTWtNDTTSDCCRWKGVACN 72
Cdd:pfam08263 1 LNDDGQALLAFKSSL---NDPPGALSSW-NSSSSDPCSWTGVTCD 41
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
245-304 |
2.64e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 42.51 E-value: 2.64e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 245 NMQELDLSQNKLVGHLPSCLTSLTGLRVLDLSSNKLTGTVPSSLGSLQSLEYLSLFDNDF 304
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
49-326 |
2.00e-04 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 44.78 E-value: 2.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 49 ESVLPTWTNDTTSDCCRWKgVACNRVSGRVTEISFGGLSLKDNSLLNLSLLHPFEDVRSLNLSSSRCSGLFDDVEGYKSL 128
Cdd:COG5238 98 EEVSPVALAETATAVATPP-PDLRRIMAKTLEDSLILYLALPRRINLIQVLKDPLGGNAVHLLGLAARLGLLAAISMAKA 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 129 RKLRKLEILDLASNKFNN----SIFHFLSAATSLTTLFLRSNNMDGS---FPAKELRDLTNLELLDLSRNRFN--GSIPI 199
Cdd:COG5238 177 LQNNSVETVYLGCNQIGDegieELAEALTQNTTVTTLWLKRNPIGDEgaeILAEALKGNKSLTTLDLSNNQIGdeGVIAL 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 200 QE-LSSLRKLKALDLSGNEfsgsMELQGkfctdlLFSIQSGICELNNMQELDLSQNKL----VGHLPSCLTSLTGLRVLD 274
Cdd:COG5238 257 AEaLKNNTTVETLYLSGNQ----IGAEG------AIALAKALQGNTTLTSLDLSVNRIgdegAIALAEGLQGNKTLHTLN 326
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 75333418 275 LSSNKLTGTVPSSLG-SLQ---SLEYLSLFDN--DFEGSFSFG-SLANLSNLMVLKLCS 326
Cdd:COG5238 327 LAYNGIGAQGAIALAkALQentTLHSLDLSDNqiGDEGAIALAkYLEGNTTLRELNLGK 385
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
156-218 |
6.69e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 38.66 E-value: 6.69e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 75333418 156 TSLTTLFLRSNNMDgSFPAKELRDLTNLELLDLSRNRFNgSIPIQELSSLRKLKALDLSGNEF 218
Cdd:pfam13855 1 PNLRSLDLSNNRLT-SLDDGAFKGLSNLKVLDLSNNLLT-TLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
249-892 |
9.27e-67 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 242.06 E-value: 9.27e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 249 LDLSQNKLVGHLPSCLTSLTGLRVLDLSSNKLTGTVPSSLGSL-QSLEYLSLFDNDFEGSFSFGSLANLSNLMVlklcsk 327
Cdd:PLN00113 74 IDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTsSSLRYLNLSNNNFTGSIPRGSIPNLETLDL------ 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 328 ssslqvlsesswkpkfqlsvialrSCNM--EKVPHFLLHQKDLRHVDLSDNNISGKLPSWLlANNTKLKVLLLQNNLFTS 405
Cdd:PLN00113 148 ------------------------SNNMlsGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSL-TNLTSLEFLTLASNQLVG 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 406 fQIPKS---AHNLLFLDVSANDFNHLFPENIGWIfPHLRYLNTSKNNFQENLPSSLGNMNGIQYMDLSRNSFHGNLPRSf 482
Cdd:PLN00113 203 -QIPRElgqMKSLKWIYLGYNNLSGEIPYEIGGL-TSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPS- 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 483 VNGCYSMAILKLSHNKLSGEIfPE---STNFTNILGLFMDNnlFTGKIGQGLRSLINLELLDMSNNNLTGVIPSWIGELP 559
Cdd:PLN00113 280 IFSLQKLISLDLSDNSLSGEI-PElviQLQNLEILHLFSNN--FTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHN 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 560 SLTALLISDNFLKGDIPMSLFNKSSLQLLDLSANSLSGVIPPQ-HDSRNGVVLLLQDNKLSGTIPD--TLLANVEILDLR 636
Cdd:PLN00113 357 NLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSlGACRSLRRVRLQDNSFSGELPSefTKLPLVYFLDIS 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 637 NNRFSGKIPEFI-NIQNISILLLRGNNFTGQIPhQLCGLSNIQLLDLSNNRLNGTIPSCLsntsfgfgkectsydydfgi 715
Cdd:PLN00113 437 NNNLQGRINSRKwDMPSLQMLSLARNKFFGGLP-DSFGSKRLENLDLSRNQFSGAVPRKL-------------------- 495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 716 sfpsdvfngfslhqdfssnknggiyfkslltldplsmdykaatqtkiefatkhrydaymgGNLKLLFGMDLSENELSGEI 795
Cdd:PLN00113 496 ------------------------------------------------------------GSLSELMQLKLSENKLSGEI 515
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 796 PVEFGGLLELRALNLSHNNLSGVIPKSISSMEKMESFDLSFNRLQGRIPSQLTELTSLSVFKVSHNNLSGVIPQGRQFNT 875
Cdd:PLN00113 516 PDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLA 595
|
650
....*....|....*..
gi 75333418 876 FDAESYFGNRLLCGQPT 892
Cdd:PLN00113 596 INASAVAGNIDLCGGDT 612
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
52-601 |
6.61e-61 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 224.73 E-value: 6.61e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 52 LPTWtnDTTSDCCRWKGVACNRVSgRVTEISfggLSLKDNSLLNLSLLHPFEDVRSLNLSSSRCSG-LFDDV-EGYKSLR 129
Cdd:PLN00113 48 LSNW--NSSADVCLWQGITCNNSS-RVVSID---LSGKNISGKISSAIFRLPYIQTINLSNNQLSGpIPDDIfTTSSSLR 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 130 KLR----------------KLEILDLASNKFNNSIFHFLSAATSLTTLFLRSNNMDGSFPAKeLRDLTNLELLDLSRNRF 193
Cdd:PLN00113 122 YLNlsnnnftgsiprgsipNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNS-LTNLTSLEFLTLASNQL 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 194 NGSIPiQELSSLRKLKALDLSGNEFSGSMELQ-GKFCT----DLLF-----SIQSGICELNNMQELDLSQNKLVGHLPSC 263
Cdd:PLN00113 201 VGQIP-RELGQMKSLKWIYLGYNNLSGEIPYEiGGLTSlnhlDLVYnnltgPIPSSLGNLKNLQYLFLYQNKLSGPIPPS 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 264 LTSLTGLRVLDLSSNKLTGTVPSSLGSLQSLEYLSLFDNDFEGSFSfGSLANLSNLMVLKLcskssslqvlsessWKPKF 343
Cdd:PLN00113 280 IFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIP-VALTSLPRLQVLQL--------------WSNKF 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 344 QlsvialrscnmEKVPHFLLHQKDLRHVDLSDNNISGKLPSWLLANNTKLKVLLLQNNLftSFQIPKS---AHNLLFLDV 420
Cdd:PLN00113 345 S-----------GEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSL--EGEIPKSlgaCRSLRRVRL 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 421 SANDFNHLFPENIGWIfPHLRYLNTSKNNFQENLPSSLGNMNGIQYMDLSRNSFHGNLPRSFvnGCYSMAILKLSHNKLS 500
Cdd:PLN00113 412 QDNSFSGELPSEFTKL-PLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF--GSKRLENLDLSRNQFS 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 501 GEIFPESTNFTNILGLFMDNNLFTGKIGQGLRSLINLELLDMSNNNLTGVIPSWIGELPSLTALLISDNFLKGDIPMSLF 580
Cdd:PLN00113 489 GAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLG 568
|
570 580
....*....|....*....|.
gi 75333418 581 NKSSLQLLDLSANSLSGVIPP 601
Cdd:PLN00113 569 NVESLVQVNISHNHLHGSLPS 589
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
141-697 |
1.14e-56 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 212.02 E-value: 1.14e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 141 SNKFNNSIFHFlsaaTSLTTLFLRSNNMDGSFPAKELRDLTNLELLDLSRNRFNGSIPiqeLSSLRKLKALDLSGNEFSG 220
Cdd:PLN00113 82 SGKISSAIFRL----PYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIP---RGSIPNLETLDLSNNMLSG 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 221 SmelqgkfctdllfsIQSGICELNNMQELDLSQNKLVGHLPSCLTSLTGLRVLDLSSNKLTGTVPSSLGSLQSLEYLSLF 300
Cdd:PLN00113 155 E--------------IPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLG 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 301 DNDFEGsfsfgslanlsnlmvlklcskssslqvlsesswkpkfqlsvialrscnmeKVPHFLLHQKDLRHVDLSDNNISG 380
Cdd:PLN00113 221 YNNLSG--------------------------------------------------EIPYEIGGLTSLNHLDLVYNNLTG 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 381 KLPSwLLANNTKLKVLLLQNNLFTSfQIPKSA---HNLLFLDVSANDFNHLFPENIGWIfPHLRYLNTSKNNFQENLPSS 457
Cdd:PLN00113 251 PIPS-SLGNLKNLQYLFLYQNKLSG-PIPPSIfslQKLISLDLSDNSLSGEIPELVIQL-QNLEILHLFSNNFTGKIPVA 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 458 LGNMNGIQYMDLSRNSFHGNLPRSfVNGCYSMAILKLSHNKLSGEIfPES-TNFTNILGLFMDNNLFTGKIGQGLRSLIN 536
Cdd:PLN00113 328 LTSLPRLQVLQLWSNKFSGEIPKN-LGKHNNLTVLDLSTNNLTGEI-PEGlCSSGNLFKLILFSNSLEGEIPKSLGACRS 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 537 LELLDMSNNNLTGVIPSWIGELPSLTALLISDNFLKGDIPMSLFNKSSLQLLDLSANSLSGVIPPQHDSRNGVVLLLQDN 616
Cdd:PLN00113 406 LRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRN 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 617 KLSGTIPDTLLANVEILDLR--NNRFSGKIP-EFINIQNISILLLRGNNFTGQIPHQLCGLSNIQLLDLSNNRLNGTIPS 693
Cdd:PLN00113 486 QFSGAVPRKLGSLSELMQLKlsENKLSGEIPdELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPK 565
|
....
gi 75333418 694 CLSN 697
Cdd:PLN00113 566 NLGN 569
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
121-454 |
2.25e-22 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 100.78 E-value: 2.25e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 121 DVEGYKSLRKLRKLEILDLASNKFNnSIFHFLSAATSLTTLFLRSNNMDgSFPAkELRDLTNLELLDLSRNRFNgSIPiQ 200
Cdd:COG4886 102 DLSGNEELSNLTNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQLT-DLPE-PLGNLTNLKSLDLSNNQLT-DLP-E 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 201 ELSSLRKLKALDLSGNEFSgsmelqgkfctdllfSIQSGICELNNMQELDLSQNKLvGHLPSCLTSLTGLRVLDLSSNKL 280
Cdd:COG4886 177 ELGNLTNLKELDLSNNQIT---------------DLPEPLGNLTNLEELDLSGNQL-TDLPEPLANLTNLETLDLSNNQL 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 281 TgTVPSsLGSLQSLEYLSLFDNDFEGSFSFGSLANLSNLMVLKLCSKSSSLQVLSESSWKPKFQLSVIALRSCNMEKVPH 360
Cdd:COG4886 241 T-DLPE-LGNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLL 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 361 FLLHQ-KDLRHVDLSDNNISGKLPSWLLANNTKLKVLLLQNNLFTSFQIPKSAHNLLFLDVSANDFNHLFPENIGWIFPH 439
Cdd:COG4886 319 LLTTLlLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTA 398
|
330
....*....|....*
gi 75333418 440 LRYLNTSKNNFQENL 454
Cdd:COG4886 399 GVLLLTLALLDAVNT 413
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
373-815 |
1.88e-19 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 91.92 E-value: 1.88e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 373 LSDNNISGKLPSWLLANNTKLKVLLLQNNLFTSFQIPKSAHNLLFLDVSANDFNHLFPENIGWIFPHLRYLNTSKNNF-- 450
Cdd:COG4886 3 LLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLll 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 451 --QENLPSSLGNMNGIQYMDLSRNSFHGNLPrsfvngcySMAILKLSHNKLSgEIFPESTNFTNILGLFMDNNLFTgKIG 528
Cdd:COG4886 83 slLLLGLTDLGDLTNLTELDLSGNEELSNLT--------NLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQLT-DLP 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 529 QGLRSLINLELLDMSNNNLTGvIPSWIGELPSLTALLISDNFLKgDIPMSLFNKSSLQLLDLSANSLSgvippqhdsrng 608
Cdd:COG4886 153 EPLGNLTNLKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQIT-DLPEPLGNLTNLEELDLSGNQLT------------ 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 609 vvlllqdnklsgTIPDTL--LANVEILDLRNNRFSgKIPEFINIQNISILLLRGNNFTGqIPHqLCGLSNIQLLDLSNNR 686
Cdd:COG4886 219 ------------DLPEPLanLTNLETLDLSNNQLT-DLPELGNLTNLEELDLSNNQLTD-LPP-LANLTNLKTLDLSNNQ 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 687 LNGTIPSCLSNTSFGFGKECTSYDYDFGISFPSDVFNGFSLHQDFSSNKNGGIYFKSLLTLDPLSMDYKAATQTKIEFAT 766
Cdd:COG4886 284 LTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLL 363
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 75333418 767 KHRYDAYMGGNLKLLFGMDLSENELSGEIPVEFGGLLELRALNLSHNNL 815
Cdd:COG4886 364 TLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLLLTLALLDAVN 412
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
136-464 |
6.20e-19 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 90.38 E-value: 6.20e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 136 ILDLASNKFNNSIFHFLSAATSLTTLFLRSNNMDGSFPAKELRDLTNLELLDLSRNRFNGSIPIQELSSLRKLKALDLSG 215
Cdd:COG4886 5 LLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 216 NEFSGSMELQGKFCTDLLFSIQSGICELNNMQELDLSQNKLVgHLPSCLTSLTGLRVLDLSSNKLTgTVPSSLGSLQSLE 295
Cdd:COG4886 85 LLLGLTDLGDLTNLTELDLSGNEELSNLTNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQLT-DLPEPLGNLTNLK 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 296 YLSLFDNDFEgSFSfGSLANLSNLMVLKLcsKSSSLQVLSESSWKPKfQLSVIALRSCNMEKVPHFLLHQKDLRHVDLSD 375
Cdd:COG4886 163 SLDLSNNQLT-DLP-EELGNLTNLKELDL--SNNQITDLPEPLGNLT-NLEELDLSGNQLTDLPEPLANLTNLETLDLSN 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 376 NNISgKLPSwlLANNTKLKVLLLQNNLFTSFQIPKSAHNLLFLDVSANDFNHLFPENIGWIFPHLRYLNTSKNNFQENLP 455
Cdd:COG4886 238 NQLT-DLPE--LGNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELL 314
|
....*....
gi 75333418 456 SSLGNMNGI 464
Cdd:COG4886 315 ILLLLLTTL 323
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
128-472 |
6.97e-18 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 87.30 E-value: 6.97e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 128 LRKLRKLEILDLASNKFNNSIFHFLSAATSLTTLFLRSNNmdgsfpakELRDLTNLELLDLSRNRFNgSIPiQELSSLRK 207
Cdd:COG4886 68 LLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE--------ELSNLTNLESLDLSGNQLT-DLP-EELANLTN 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 208 LKALDLSGNEFSgsmelqgkfctdllfSIQSGICELNNMQELDLSQNKLVGhLPSCLTSLTGLRVLDLSSNKLTgTVPSS 287
Cdd:COG4886 138 LKELDLSNNQLT---------------DLPEPLGNLTNLKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQIT-DLPEP 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 288 LGSLQSLEYLSLFDNDFEgSFSfGSLANLSNLMVLKLCS-KSSSLQVLSESSwkpkfQLSVIALRSCNMEKVPhFLLHQK 366
Cdd:COG4886 201 LGNLTNLEELDLSGNQLT-DLP-EPLANLTNLETLDLSNnQLTDLPELGNLT-----NLEELDLSNNQLTDLP-PLANLT 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 367 DLRHVDLSDNNISgklpSWLLANNTKLKVLLLQNNLFTSFQIPKSAHNLLFLDVSANDFNHLFPENIGWIFPHLRYLNTS 446
Cdd:COG4886 273 NLKTLDLSNNQLT----DLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLA 348
|
330 340
....*....|....*....|....*.
gi 75333418 447 KNNFQENLPSSLGNMNGIQYMDLSRN 472
Cdd:COG4886 349 LLTLLLLLNLLSLLLTLLLTLGLLGL 374
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
783-896 |
2.08e-17 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 87.18 E-value: 2.08e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 783 GMDLSENELSGEIPVEFGGLLELRALNLSHNNLSGVIPKSISSMEKMESFDLSFNRLQGRIPSQLTELTSLSVFKVSHNN 862
Cdd:PLN03150 422 GLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNS 501
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 75333418 863 LSGVIP--------QGRQFNTFDaesyfgNRLLCGQPTNRSC 896
Cdd:PLN03150 502 LSGRVPaalggrllHRASFNFTD------NAGLCGIPGLRAC 537
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
649-868 |
6.65e-17 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 86.06 E-value: 6.65e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 649 NIQNISILLLRGNNFTGQIPHQLCGLSNIQLLDLSNNRLNGTIPSCLSNTSFGFgkectsydydfgisfpsdvfngfsLH 728
Cdd:PLN00113 67 NSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSL------------------------RY 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 729 QDFSSNKNGGiyfkslltldPLSmdykaatqtkiefatkhrydaymGGNLKLLFGMDLSENELSGEIPVEFGGLLELRAL 808
Cdd:PLN00113 123 LNLSNNNFTG----------SIP-----------------------RGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVL 169
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 809 NLSHNNLSGVIPKSISSMEKMESFDLSFNRLQGRIPSQLTELTSLSVFKVSHNNLSGVIP 868
Cdd:PLN00113 170 DLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIP 229
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
296-712 |
3.12e-15 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 79.21 E-value: 3.12e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 296 YLSLFDNDFEGSFSFGSLANLSNLMVLKLCSKSSSLQVLSESSWKPKFQLSVIALRSCNMEKVPHFLLHQKDLRHVDLSD 375
Cdd:COG4886 1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 376 NNISGKLPSWLLANNTKLKVLLLQNNLFTSfqipkSAHNLLFLDVSANDFNHLfPENIGwIFPHLRYLNTSKNNFqENLP 455
Cdd:COG4886 81 LLSLLLLGLTDLGDLTNLTELDLSGNEELS-----NLTNLESLDLSGNQLTDL-PEELA-NLTNLKELDLSNNQL-TDLP 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 456 SSLGNMNGIQYMDLSRNSFHgNLPRSFVNgCYSMAILKLSHNKLSgEIFPESTNFTNILGLFMDNNLFTgKIGQGLRSLI 535
Cdd:COG4886 153 EPLGNLTNLKSLDLSNNQLT-DLPEELGN-LTNLKELDLSNNQIT-DLPEPLGNLTNLEELDLSGNQLT-DLPEPLANLT 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 536 NLELLDMSNNNLTGVipSWIGELPSLTALLISDNFLKgDIPmSLFNKSSLQLLDLSANSLSGVIPPQHDSRNGVVLLLQD 615
Cdd:COG4886 229 NLETLDLSNNQLTDL--PELGNLTNLEELDLSNNQLT-DLP-PLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLL 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 616 NKLSGTIPDTLLANVEILDLRNNRFSGKIPEFINIQNISILLLRGNNFTGQIPHQLCGLSNIQLLDLSNNRLNGTIPSCL 695
Cdd:COG4886 305 LLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLAL 384
|
410
....*....|....*..
gi 75333418 696 SNTSFGFGKECTSYDYD 712
Cdd:COG4886 385 LLLTLLLLLLTTTAGVL 401
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
105-287 |
1.22e-14 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 78.74 E-value: 1.22e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 105 VRSLNLSSSRCSGLFDDVEGykslrKLRKLEILDLASNKFNNSIFHFlSAATSLTTLFLRSNNMDGSFPAKeLRDLTNLE 184
Cdd:PLN00113 430 VYFLDISNNNLQGRINSRKW-----DMPSLQMLSLARNKFFGGLPDS-FGSKRLENLDLSRNQFSGAVPRK-LGSLSELM 502
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 185 LLDLSRNRFNGSIPiQELSSLRKLKALDLSGNEFSGSmelqgkfctdllfsIQSGICELNNMQELDLSQNKLVGHLPSCL 264
Cdd:PLN00113 503 QLKLSENKLSGEIP-DELSSCKKLVSLDLSHNQLSGQ--------------IPASFSEMPVLSQLDLSQNQLSGEIPKNL 567
|
170 180
....*....|....*....|...
gi 75333418 265 TSLTGLRVLDLSSNKLTGTVPSS 287
Cdd:PLN00113 568 GNVESLVQVNISHNHLHGSLPST 590
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
249-699 |
7.31e-14 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 74.97 E-value: 7.31e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 249 LDLSQNKLVGHLPSCLTSLTGLRVLDLSSNKLTGTVPSSLGSLQSLEYLSLFDNDFEGSFSFGSLANLSNLMVLKLCSKS 328
Cdd:COG4886 2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 329 SSLQVLSESSWKPKFQLSVIALRSCNmekvphFLLHQKDLRHVDLSDNNISgKLPSWLlANNTKLKVLLLQNNLFTSFQI 408
Cdd:COG4886 82 LSLLLLGLTDLGDLTNLTELDLSGNE------ELSNLTNLESLDLSGNQLT-DLPEEL-ANLTNLKELDLSNNQLTDLPE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 409 P-KSAHNLLFLDVSANDFNHLfPENIGWIfPHLRYLNTSKNNFqENLPSSLGNMNGIQYMDLSRNSFHgNLPRSFVNgCY 487
Cdd:COG4886 154 PlGNLTNLKSLDLSNNQLTDL-PEELGNL-TNLKELDLSNNQI-TDLPEPLGNLTNLEELDLSGNQLT-DLPEPLAN-LT 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 488 SMAILKLSHNKLSGeiFPEstnftnilglfmdnnlftgkigqgLRSLINLELLDMSNNNLTGVIPSwiGELPSLTALLIS 567
Cdd:COG4886 229 NLETLDLSNNQLTD--LPE------------------------LGNLTNLEELDLSNNQLTDLPPL--ANLTNLKTLDLS 280
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 568 DNFLKGDIPMSLFNKSSLQLLDLSANSLSGVIPPQHDSRNGVVLLLQDNKLSGTIPDTLLANVEILDLRNNRFSGKIPEF 647
Cdd:COG4886 281 NNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLS 360
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 75333418 648 INIQNISILLLRGNNFTGQIPHQLCGLSNIQLLDLSNNRLNGTIPSCLSNTS 699
Cdd:COG4886 361 LLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLLLTLALLDAVN 412
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
513-600 |
5.98e-13 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 72.93 E-value: 5.98e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 513 ILGLFMDNNLFTGKIGQGLRSLINLELLDMSNNNLTGVIPSWIGELPSLTALLISDNFLKGDIPMSLFNKSSLQLLDLSA 592
Cdd:PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499
|
....*...
gi 75333418 593 NSLSGVIP 600
Cdd:PLN03150 500 NSLSGRVP 507
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
236-306 |
2.36e-11 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 67.53 E-value: 2.36e-11
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 75333418 236 IQSGICELNNMQELDLSQNKLVGHLPSCLTSLTGLRVLDLSSNKLTGTVPSSLGSLQSLEYLSLFDNDFEG 306
Cdd:PLN03150 434 IPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSG 504
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
186-291 |
3.88e-10 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 63.68 E-value: 3.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 186 LDLSRNRFNGSIPiQELSSLRKLKALDLSGNEFSGSmelqgkfctdllfsIQSGICELNNMQELDLSQNKLVGHLPSCLT 265
Cdd:PLN03150 423 LGLDNQGLRGFIP-NDISKLRHLQSINLSGNSIRGN--------------IPPSLGSITSLEVLDLSYNSFNGSIPESLG 487
|
90 100
....*....|....*....|....*.
gi 75333418 266 SLTGLRVLDLSSNKLTGTVPSSLGSL 291
Cdd:PLN03150 488 QLTSLRILNLNGNSLSGRVPAALGGR 513
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
439-516 |
2.54e-09 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 60.99 E-value: 2.54e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 439 HLRYLNTSKNNFQENLPSSLGNMNGIQYMDLSRNSFHGNLPRSfVNGCYSMAILKLSHNKLSGE---------IFPESTN 509
Cdd:PLN03150 443 HLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPES-LGQLTSLRILNLNGNSLSGRvpaalggrlLHRASFN 521
|
....*..
gi 75333418 510 FTNILGL 516
Cdd:PLN03150 522 FTDNAGL 528
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
571-678 |
3.17e-09 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 60.60 E-value: 3.17e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 571 LKGDIPMSLFNKSSLQLLDLSANSLSGVIPPQHDSRNGVVLL-LQDNKLSGTIPDTL--LANVEILDLRNNRFSGKIPef 647
Cdd:PLN03150 430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLdLSYNSFNGSIPESLgqLTSLRILNLNGNSLSGRVP-- 507
|
90 100 110
....*....|....*....|....*....|.
gi 75333418 648 iniQNISILLLRGNNFTGQIPHQLCGLSNIQ 678
Cdd:PLN03150 508 ---AALGGRLLHRASFNFTDNAGLCGIPGLR 535
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
518-906 |
4.95e-09 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 59.56 E-value: 4.95e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 518 MDNNLFTGKIGQGLRSLINLELLDMSNNNLTGVIPSWIGELPSLTALLISDNFLKGDIPMSLFNKSSLQLLDLSANSLSG 597
Cdd:COG4886 5 LLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 598 VIPPQHDSRNGVVLLLQDnkLSGTIPDTLLANVEILDLRNNRFSGKIPEFINIQNISILLLRGNNFTgQIPHQLCGLSNI 677
Cdd:COG4886 85 LLLGLTDLGDLTNLTELD--LSGNEELSNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLT-DLPEPLGNLTNL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 678 QLLDLSNNRLNgTIPSCLSNtsfgfgkectsydydfgisfpsdvfngfslhqdfssnknggiyFKSLLTLDplsmdykaA 757
Cdd:COG4886 162 KSLDLSNNQLT-DLPEELGN-------------------------------------------LTNLKELD--------L 189
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 758 TQTKIEFATKHrydaymGGNLKLLFGMDLSENELSgEIPVEFGGLLELRALNLSHNNLSgVIPkSISSMEKMESFDLSFN 837
Cdd:COG4886 190 SNNQITDLPEP------LGNLTNLEELDLSGNQLT-DLPEPLANLTNLETLDLSNNQLT-DLP-ELGNLTNLEELDLSNN 260
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 75333418 838 RLQGrIPSqLTELTSLSVFKVSHNNLSGVIPQGRQFNTFDAESYFGNRLLCGQPTNRSCNNNSYEEADN 906
Cdd:COG4886 261 QLTD-LPP-LANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLL 327
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
152-319 |
5.53e-09 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 57.49 E-value: 5.53e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 152 LSAATSLTTLFLRSNN---MDGsfpakeLRDLTNLELLDLSRNRFNgsiPIQELSSLRKLKALDLSGNEfsgsmelqgkf 228
Cdd:cd21340 20 LSLCKNLKVLYLYDNKitkIEN------LEFLTNLTHLYLQNNQIE---KIENLENLVNLKKLYLGGNR----------- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 229 ctdllFSIQSGICELNNMQELDLSQNKL-VGHL----PSCLTSLTG-LRVLDLSSNKLTGtvPSSLGSLQSLEYLSLFDN 302
Cdd:cd21340 80 -----ISVVEGLENLTNLEELHIENQRLpPGEKltfdPRSLAALSNsLRVLNISGNNIDS--LEPLAPLRNLEQLDASNN 152
|
170 180
....*....|....*....|.
gi 75333418 303 DFEG----SFSFGSLANLSNL 319
Cdd:cd21340 153 QISDleelLDLLSSWPSLREL 173
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
110-304 |
7.18e-09 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 58.52 E-value: 7.18e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 110 LSSSRCSGLFDDVEGYKSLRKLRKLEILDLASNKFNNSIFHFLSAA-----TSLTTLFLRSNNM--DGSFP-AKELRDLT 181
Cdd:cd00116 86 LDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGlkdlpPALEKLVLGRNRLegASCEAlAKALRANR 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 182 NLELLDLSRNRFNGS-IP--IQELSSLRKLKALDLSGNEFsgsMELQGKFCTDLLFSIQSgicelnnMQELDLSQNKL-- 256
Cdd:cd00116 166 DLKELNLANNGIGDAgIRalAEGLKANCNLEVLDLNNNGL---TDEGASALAETLASLKS-------LEVLNLGDNNLtd 235
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 75333418 257 --VGHL-PSCLTSLTGLRVLDLSSNKLT----GTVPSSLGSLQSLEYLSLFDNDF 304
Cdd:cd00116 236 agAAALaSALLSPNISLLTLSLSCNDITddgaKDLAEVLAEKESLLELDLRGNKF 290
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
582-702 |
5.96e-08 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 56.75 E-value: 5.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 582 KSSLQL-LDLSANSlSGVIPPQH---------DSRNG--VV--LLLQDNKLSGTIPDTL--LANVEILDLRNNRFSGKIP 645
Cdd:PLN03150 381 KSSLGLpLRFGWNG-DPCVPQQHpwsgadcqfDSTKGkwFIdgLGLDNQGLRGFIPNDIskLRHLQSINLSGNSIRGNIP 459
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 75333418 646 -EFINIQNISILLLRGNNFTGQIPHQLCGLSNIQLLDLSNNRLNGTIPSCLS-----NTSFGF 702
Cdd:PLN03150 460 pSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGgrllhRASFNF 522
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
492-579 |
9.96e-08 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 55.98 E-value: 9.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 492 LKLSHNKLSGEIFPESTNFTNILGLFMDNNLFTGKIGQGLRSLINLELLDMSNNNLTGVIPSWIGELPSLTALLISDNFL 571
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
|
....*...
gi 75333418 572 KGDIPMSL 579
Cdd:PLN03150 503 SGRVPAAL 510
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
152-220 |
2.76e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 54.44 E-value: 2.76e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 75333418 152 LSAATSLTTLFLRSNNMDGSFPAkELRDLTNLELLDLSRNRFNGSIPiQELSSLRKLKALDLSGNEFSG 220
Cdd:PLN03150 438 ISKLRHLQSINLSGNSIRGNIPP-SLGSITSLEVLDLSYNSFNGSIP-ESLGQLTSLRILNLNGNSLSG 504
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
249-333 |
5.11e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 53.67 E-value: 5.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 249 LDLSQNKLVGHLPSCLTSLTGLRVLDLSSNKLTGTVPSSLGSLQSLEYLSLFDNDFEGSFSfGSLANLSNLMVLKLCSKS 328
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIP-ESLGQLTSLRILNLNGNS 501
|
....*
gi 75333418 329 SSLQV 333
Cdd:PLN03150 502 LSGRV 506
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
170-426 |
9.42e-07 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 51.97 E-value: 9.42e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 170 GSFPAKELRDLTNLELLDLSRNrFNGSIP------IQELSSLRKLKALDLSGNEFSGsmELQGkfctdLLFSIQSGicel 243
Cdd:cd00116 40 AKALASALRPQPSLKELCLSLN-ETGRIPrglqslLQGLTKGCGLQELDLSDNALGP--DGCG-----VLESLLRS---- 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 244 NNMQELDLSQNKL-VGHLPSCLTSLT----GLRVLDLSSNKLTGTVPSSLGSL----QSLEYLSLFDNDFEGS---FSFG 311
Cdd:cd00116 108 SSLQELKLNNNGLgDRGLRLLAKGLKdlppALEKLVLGRNRLEGASCEALAKAlranRDLKELNLANNGIGDAgirALAE 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 312 SLANLSNLMVLKLCSKssslqvlsesswkpkfqlsviALRSCNMEKVPHFLLHQKDLRHVDLSDNNISG----KLPSWLL 387
Cdd:cd00116 188 GLKANCNLEVLDLNNN---------------------GLTDEGASALAETLASLKSLEVLNLGDNNLTDagaaALASALL 246
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 75333418 388 ANNTKLKVLLLQNNLFTSF------QIPKSAHNLLFLDVSANDFN 426
Cdd:cd00116 247 SPNISLLTLSLSCNDITDDgakdlaEVLAEKESLLELDLRGNKFG 291
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
454-559 |
2.56e-06 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 51.36 E-value: 2.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 454 LPSSLGNMNGIQYMDLSRNSFHGNLPRSFVNgCYSMAILKLSHNKLSGEIfPEStnftnilglfmdnnlftgkIGQglrs 533
Cdd:PLN03150 434 IPNDISKLRHLQSINLSGNSIRGNIPPSLGS-ITSLEVLDLSYNSFNGSI-PES-------------------LGQ---- 488
|
90 100
....*....|....*....|....*.
gi 75333418 534 LINLELLDMSNNNLTGVIPSWIGELP 559
Cdd:PLN03150 489 LTSLRILNLNGNSLSGRVPAALGGRL 514
|
|
| LRRNT_2 |
pfam08263 |
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ... |
28-72 |
7.20e-06 |
|
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.
Pssm-ID: 462411 [Multi-domain] Cd Length: 41 Bit Score: 43.82 E-value: 7.20e-06
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 75333418 28 IDEEKIALFELRKHMisrTESESVLPTWtNDTTSDCCRWKGVACN 72
Cdd:pfam08263 1 LNDDGQALLAFKSSL---NDPPGALSSW-NSSSSDPCSWTGVTCD 41
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
522-688 |
7.78e-06 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 48.89 E-value: 7.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 522 LFTGKIGQGLRSLINLELLDMSNNNLTGVIPSWIGEL----PSLTALLISDNFLKGD------IPMSLFNKSSLQLLDLS 591
Cdd:cd00116 10 LKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASAlrpqPSLKELCLSLNETGRIprglqsLLQGLTKGCGLQELDLS 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 592 ANSLS----GVIPPQHDSRNGVVLLLQDNKLSGTIPDTLLA-------NVEILDLRNNRFSGKIPE-----FINIQNISI 655
Cdd:cd00116 90 DNALGpdgcGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKglkdlppALEKLVLGRNRLEGASCEalakaLRANRDLKE 169
|
170 180 190
....*....|....*....|....*....|....*..
gi 75333418 656 LLLRGNNFTGQ-IPHQLCGL---SNIQLLDLSNNRLN 688
Cdd:cd00116 170 LNLANNGIGDAgIRALAEGLkanCNLEVLDLNNNGLT 206
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
245-304 |
2.64e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 42.51 E-value: 2.64e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 245 NMQELDLSQNKLVGHLPSCLTSLTGLRVLDLSSNKLTGTVPSSLGSLQSLEYLSLFDNDF 304
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
776-823 |
3.56e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 47.50 E-value: 3.56e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 75333418 776 GNLKLLFGMDLSENELSGEIPVEFGGLLELRALNLSHNNLSGVIPKSI 823
Cdd:PLN03150 463 GSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAAL 510
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
122-216 |
7.44e-05 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 45.16 E-value: 7.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 122 VEGyksLRKLRKLEILDLASNK-FNNSIFHF-----LSAATSLTTLFLRSNNMDGSfpaKELRDLTNLELLDLSRNRFNG 195
Cdd:cd21340 83 VEG---LENLTNLEELHIENQRlPPGEKLTFdprslAALSNSLRVLNISGNNIDSL---EPLAPLRNLEQLDASNNQISD 156
|
90 100
....*....|....*....|..
gi 75333418 196 SIPIQE-LSSLRKLKALDLSGN 216
Cdd:cd21340 157 LEELLDlLSSWPSLRELDLTGN 178
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
581-863 |
9.61e-05 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 46.23 E-value: 9.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 581 NKSSLQLLDLSANSLSGVIPPQhdsrngVVLLLQDNKLSGTIPDTLLANVEILDLRNNRFSgKIPEFINiQNISILLLRG 660
Cdd:PRK15370 179 NKTELRLKILGLTTIPACIPEQ------ITTLILDNNELKSLPENLQGNIKTLYANSNQLT-SIPATLP-DTIQEMELSI 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 661 NNFTgQIPHQLCglSNIQLLDLSNNRLngtipSCLSNTsfgFGKECTSYD-YDFGI-SFPSDVFNGFSlHQDFSSNKngg 738
Cdd:PRK15370 251 NRIT-ELPERLP--SALQSLDLFHNKI-----SCLPEN---LPEELRYLSvYDNSIrTLPAHLPSGIT-HLNVQSNS--- 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 739 iyfkslLTLDPlsmdykaatqtkiefatkhrydAYMGGNLKLLFGMDLSENELSGEIPVefggllELRALNLSHNNLSgV 818
Cdd:PRK15370 316 ------LTALP----------------------ETLPPGLKTLEAGENALTSLPASLPP------ELQVLDVSKNQIT-V 360
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 75333418 819 IPKSISSmeKMESFDLSFNRLQGrIPSQLTelTSLSVFKVSHNNL 863
Cdd:PRK15370 361 LPETLPP--TITTLDVSRNALTN-LPENLP--AALQIMQASRNNL 400
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
536-595 |
1.09e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 40.97 E-value: 1.09e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 536 NLELLDMSNNNLTGVIPSWIGELPSLTALLISDNFLKGDIPMSLFNKSSLQLLDLSANSL 595
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
438-664 |
1.23e-04 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 45.42 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 438 PHLRYLNTSKNNFQEN------LPSSLGNMNGIQYMDLSRNSFHGNLPRSFVN--GCYSMAILKLSHNKLSGEIFPES-- 507
Cdd:cd00116 51 PSLKELCLSLNETGRIprglqsLLQGLTKGCGLQELDLSDNALGPDGCGVLESllRSSSLQELKLNNNGLGDRGLRLLak 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 508 ---TNFTNILGLFMDNNLFTGK----IGQGLRSLINLELLDMSNNNLTGV-IPSWIGELPSLTALL---ISDNFL--KGD 574
Cdd:cd00116 131 glkDLPPALEKLVLGRNRLEGAsceaLAKALRANRDLKELNLANNGIGDAgIRALAEGLKANCNLEvldLNNNGLtdEGA 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 575 IPMS--LFNKSSLQLLDLSANSLSgvippqhdSRNGVVLLLQDNKLSGTIPDTLLANVEILDLRNNRFSGKIPEFINIQN 652
Cdd:cd00116 211 SALAetLASLKSLEVLNLGDNNLT--------DAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLE 282
|
250
....*....|..
gi 75333418 653 ISillLRGNNFT 664
Cdd:cd00116 283 LD---LRGNKFG 291
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
784-839 |
1.98e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 40.20 E-value: 1.98e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 75333418 784 MDLSENELSGEIPVEFGGLLELRALNLSHNNLSGVIPKSISSMEKMESFDLSFNRL 839
Cdd:pfam13855 6 LDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
49-326 |
2.00e-04 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 44.78 E-value: 2.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 49 ESVLPTWTNDTTSDCCRWKgVACNRVSGRVTEISFGGLSLKDNSLLNLSLLHPFEDVRSLNLSSSRCSGLFDDVEGYKSL 128
Cdd:COG5238 98 EEVSPVALAETATAVATPP-PDLRRIMAKTLEDSLILYLALPRRINLIQVLKDPLGGNAVHLLGLAARLGLLAAISMAKA 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 129 RKLRKLEILDLASNKFNN----SIFHFLSAATSLTTLFLRSNNMDGS---FPAKELRDLTNLELLDLSRNRFN--GSIPI 199
Cdd:COG5238 177 LQNNSVETVYLGCNQIGDegieELAEALTQNTTVTTLWLKRNPIGDEgaeILAEALKGNKSLTTLDLSNNQIGdeGVIAL 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 200 QE-LSSLRKLKALDLSGNEfsgsMELQGkfctdlLFSIQSGICELNNMQELDLSQNKL----VGHLPSCLTSLTGLRVLD 274
Cdd:COG5238 257 AEaLKNNTTVETLYLSGNQ----IGAEG------AIALAKALQGNTTLTSLDLSVNRIgdegAIALAEGLQGNKTLHTLN 326
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 75333418 275 LSSNKLTGTVPSSLG-SLQ---SLEYLSLFDN--DFEGSFSFG-SLANLSNLMVLKLCS 326
Cdd:COG5238 327 LAYNGIGAQGAIALAkALQentTLHSLDLSDNqiGDEGAIALAkYLEGNTTLRELNLGK 385
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
804-863 |
2.31e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 40.20 E-value: 2.31e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 804 ELRALNLSHNNLSGVIPKSISSMEKMESFDLSFNRLQGRIPSQLTELTSLSVFKVSHNNL 863
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
126-281 |
3.06e-04 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 44.40 E-value: 3.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 126 KSLRKLRKLEILDLASNKFNNS----IFHFLSAATSLTTLFLRSNNMDGS---FPAKELRDLTNLELLDLSRNR--FNGS 196
Cdd:COG5238 230 EALKGNKSLTTLDLSNNQIGDEgviaLAEALKNNTTVETLYLSGNQIGAEgaiALAKALQGNTTLTSLDLSVNRigDEGA 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 197 IPIQE-LSSLRKLKALDLSGNEFSGsmelQGkfCTDLLFSIQsgicELNNMQELDLSQNKLVGH----LPSCLTSLTGLR 271
Cdd:COG5238 310 IALAEgLQGNKTLHTLNLAYNGIGA----QG--AIALAKALQ----ENTTLHSLDLSDNQIGDEgaiaLAKYLEGNTTLR 379
|
170
....*....|
gi 75333418 272 VLDLSSNKLT 281
Cdd:COG5238 380 ELNLGKNNIG 389
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
807-874 |
3.07e-04 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 44.84 E-value: 3.07e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 75333418 807 ALNLSHNNLSGVIPKSISSMEKMESFDLSFNRLQGRIPSQLTELT-SLSVFKVSHNNLSGVIPQGRQFN 874
Cdd:PLN00113 73 SIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSsSLRYLNLSNNNFTGSIPRGSIPN 141
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
156-218 |
6.69e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 38.66 E-value: 6.69e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 75333418 156 TSLTTLFLRSNNMDgSFPAKELRDLTNLELLDLSRNRFNgSIPIQELSSLRKLKALDLSGNEF 218
Cdd:pfam13855 1 PNLRSLDLSNNRLT-SLDDGAFKGLSNLKVLDLSNNLLT-TLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
362-596 |
1.35e-03 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 41.96 E-value: 1.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 362 LLHQKDLRHVDLSDNNISGKLPSWLLA-----NNTKLKVLLLQNNLFTsfqiPKSAHnlLFLDVSANDFNHLFP-ENIGW 435
Cdd:cd00116 47 LRPQPSLKELCLSLNETGRIPRGLQSLlqgltKGCGLQELDLSDNALG----PDGCG--VLESLLRSSSLQELKlNNNGL 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 436 IFPHLRYLNTSKNNFQENLPSslgnmngiqyMDLSRNSFHGNLPRSF-----VNGcySMAILKLSHNKLSGE----IFPE 506
Cdd:cd00116 121 GDRGLRLLAKGLKDLPPALEK----------LVLGRNRLEGASCEALakalrANR--DLKELNLANNGIGDAgiraLAEG 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 507 STNFTNILGLFMDNNLFT----GKIGQGLRSLINLELLDMSNNNLTGVI-----PSWIGELPSLTALLISDNFLKGDIPM 577
Cdd:cd00116 189 LKANCNLEVLDLNNNGLTdegaSALAETLASLKSLEVLNLGDNNLTDAGaaalaSALLSPNISLLTLSLSCNDITDDGAK 268
|
250 260
....*....|....*....|...
gi 75333418 578 SL----FNKSSLQLLDLSANSLS 596
Cdd:cd00116 269 DLaevlAEKESLLELDLRGNKFG 291
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
516-569 |
1.88e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.50 E-value: 1.88e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 75333418 516 LFMDNNLFTGKIGQGLRSLINLELLDMSNNNLTGVIPSWIGELPSLTALLISDN 569
Cdd:pfam13855 6 LDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGN 59
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
629-687 |
2.53e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.12 E-value: 2.53e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 75333418 629 NVEILDLRNNRFSGKIPE-FINIQNISILLLRGNNFTGQIPHQLCGLSNIQLLDLSNNRL 687
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGaFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
102-174 |
3.88e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 40.95 E-value: 3.88e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 75333418 102 FEDVRSLNLSSSRCSGLFDdvegyKSLRKLRKLEILDLASNKFNNSIFHFLSAATSLTTLFLRSNNMDGSFPA 174
Cdd:PLN03150 441 LRHLQSINLSGNSIRGNIP-----PSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPA 508
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
132-193 |
4.56e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 36.35 E-value: 4.56e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 75333418 132 RKLEILDLASNKFNN---SIFHFLSaatSLTTLFLRSNNMDgSFPAKELRDLTNLELLDLSRNRF 193
Cdd:pfam13855 1 PNLRSLDLSNNRLTSlddGAFKGLS---NLKVLDLSNNLLT-TLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| |
