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Conserved domains on  [gi|81866090|sp|Q810H5|]
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RecName: Full=Galanin-like peptide; Flags: Precursor

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Galanin super family cl30967
Galanin; Galanin is a neuropeptide that controls various biological activities: it regulates ...
 24-44 6.68e-04

Galanin; Galanin is a neuropeptide that controls various biological activities: it regulates the release growth hormone, inhibits the release of insulin and somatostatin, contracts smooth muscle of the gastrointestinal and genitourinary tract and may be involved in the control of adrenal secretion


The actual alignment was detected with superfamily member smart00071:

Pssm-ID: 128385 [Multi-domain]  Cd Length: 103  Bit Score: 36.39  E-value: 6.68e-04
                           10        20
                   ....*....|....*....|.
gi 81866090     24 APAHRGRGgWTLNSAGYLLGP 44
Cdd:smart00071   6 SPVKEKRG-WTLNSAGYLLGP 25
 
Name Accession Description Interval E-value
Galanin smart00071
Galanin; Galanin is a neuropeptide that controls various biological activities: it regulates ...
 24-44 6.68e-04

Galanin; Galanin is a neuropeptide that controls various biological activities: it regulates the release growth hormone, inhibits the release of insulin and somatostatin, contracts smooth muscle of the gastrointestinal and genitourinary tract and may be involved in the control of adrenal secretion


Pssm-ID: 128385 [Multi-domain]  Cd Length: 103  Bit Score: 36.39  E-value: 6.68e-04
                           10        20
                   ....*....|....*....|.
gi 81866090     24 APAHRGRGgWTLNSAGYLLGP 44
Cdd:smart00071   6 SPVKEKRG-WTLNSAGYLLGP 25
Galanin pfam01296
Galanin;
32-44 5.55e-03

Galanin;


Pssm-ID: 366564  Cd Length: 29  Bit Score: 32.21  E-value: 5.55e-03
                          10
                  ....*....|...
gi 81866090    32 GWTLNSAGYLLGP 44
Cdd:pfam01296   1 GWTLNSAGYLLGP 13
 
Name Accession Description Interval E-value
Galanin smart00071
Galanin; Galanin is a neuropeptide that controls various biological activities: it regulates ...
 24-44 6.68e-04

Galanin; Galanin is a neuropeptide that controls various biological activities: it regulates the release growth hormone, inhibits the release of insulin and somatostatin, contracts smooth muscle of the gastrointestinal and genitourinary tract and may be involved in the control of adrenal secretion


Pssm-ID: 128385 [Multi-domain]  Cd Length: 103  Bit Score: 36.39  E-value: 6.68e-04
                           10        20
                   ....*....|....*....|.
gi 81866090     24 APAHRGRGgWTLNSAGYLLGP 44
Cdd:smart00071   6 SPVKEKRG-WTLNSAGYLLGP 25
Galanin pfam01296
Galanin;
32-44 5.55e-03

Galanin;


Pssm-ID: 366564  Cd Length: 29  Bit Score: 32.21  E-value: 5.55e-03
                          10
                  ....*....|...
gi 81866090    32 GWTLNSAGYLLGP 44
Cdd:pfam01296   1 GWTLNSAGYLLGP 13
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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