NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|74758522|sp|Q6S9Z5|]
View 

RecName: Full=Zinc finger protein 474; AltName: Full=Testis-specific zinc finger protein; Short=TSZFP

Protein Classification

C2HC-type zinc finger protein( domain architecture ID 10621545)

C2HC-type zinc finger protein similar to Homo sapiens zinc finger protein 474 (ZNF474), a testis-specific zinc finger protein

CATH:  4.10.320.30
Gene Ontology:  GO:0008270
PubMed:  1280325|17210253|12665246
SCOP:  4003606

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 283-307 1.90e-05

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


:

Pssm-ID: 464037  Cd Length: 25  Bit Score: 41.02  E-value: 1.90e-05
                          10        20
                  ....*....|....*....|....*
gi 74758522   283 QLVFCPHCSRIFTSDRLLVHQRSCK 307
Cdd:pfam13913   1 ELVPCPICGRTFNPDRLAKHEKICK 25
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 164-188 2.89e-04

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


:

Pssm-ID: 464037  Cd Length: 25  Bit Score: 37.56  E-value: 2.89e-04
                          10        20
                  ....*....|....*....|....*
gi 74758522   164 QLLPCESCGRTFLPDHLLVHHRSCK 188
Cdd:pfam13913   1 ELVPCPICGRTFNPDRLAKHEKICK 25
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 97-116 3.77e-04

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


:

Pssm-ID: 464037  Cd Length: 25  Bit Score: 37.17  E-value: 3.77e-04
                          10        20
                  ....*....|....*....|
gi 74758522    97 CYICGREFGSQSIAIHEPQC 116
Cdd:pfam13913   5 CPICGRTFNPDRLAKHEKIC 24
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 221-243 1.64e-03

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


:

Pssm-ID: 464037  Cd Length: 25  Bit Score: 35.63  E-value: 1.64e-03
                          10        20
                  ....*....|....*....|...
gi 74758522   221 TVICYICGKEFGTLSLPIHEPKC 243
Cdd:pfam13913   2 LVPCPICGRTFNPDRLAKHEKIC 24
 
Name Accession Description Interval E-value
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 283-307 1.90e-05

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


Pssm-ID: 464037  Cd Length: 25  Bit Score: 41.02  E-value: 1.90e-05
                          10        20
                  ....*....|....*....|....*
gi 74758522   283 QLVFCPHCSRIFTSDRLLVHQRSCK 307
Cdd:pfam13913   1 ELVPCPICGRTFNPDRLAKHEKICK 25
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 164-188 2.89e-04

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


Pssm-ID: 464037  Cd Length: 25  Bit Score: 37.56  E-value: 2.89e-04
                          10        20
                  ....*....|....*....|....*
gi 74758522   164 QLLPCESCGRTFLPDHLLVHHRSCK 188
Cdd:pfam13913   1 ELVPCPICGRTFNPDRLAKHEKICK 25
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 97-116 3.77e-04

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


Pssm-ID: 464037  Cd Length: 25  Bit Score: 37.17  E-value: 3.77e-04
                          10        20
                  ....*....|....*....|
gi 74758522    97 CYICGREFGSQSIAIHEPQC 116
Cdd:pfam13913   5 CPICGRTFNPDRLAKHEKIC 24
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 221-243 1.64e-03

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


Pssm-ID: 464037  Cd Length: 25  Bit Score: 35.63  E-value: 1.64e-03
                          10        20
                  ....*....|....*....|...
gi 74758522   221 TVICYICGKEFGTLSLPIHEPKC 243
Cdd:pfam13913   2 LVPCPICGRTFNPDRLAKHEKIC 24
 
Name Accession Description Interval E-value
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 283-307 1.90e-05

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


Pssm-ID: 464037  Cd Length: 25  Bit Score: 41.02  E-value: 1.90e-05
                          10        20
                  ....*....|....*....|....*
gi 74758522   283 QLVFCPHCSRIFTSDRLLVHQRSCK 307
Cdd:pfam13913   1 ELVPCPICGRTFNPDRLAKHEKICK 25
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 164-188 2.89e-04

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


Pssm-ID: 464037  Cd Length: 25  Bit Score: 37.56  E-value: 2.89e-04
                          10        20
                  ....*....|....*....|....*
gi 74758522   164 QLLPCESCGRTFLPDHLLVHHRSCK 188
Cdd:pfam13913   1 ELVPCPICGRTFNPDRLAKHEKICK 25
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 97-116 3.77e-04

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


Pssm-ID: 464037  Cd Length: 25  Bit Score: 37.17  E-value: 3.77e-04
                          10        20
                  ....*....|....*....|
gi 74758522    97 CYICGREFGSQSIAIHEPQC 116
Cdd:pfam13913   5 CPICGRTFNPDRLAKHEKIC 24
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 221-243 1.64e-03

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


Pssm-ID: 464037  Cd Length: 25  Bit Score: 35.63  E-value: 1.64e-03
                          10        20
                  ....*....|....*....|...
gi 74758522   221 TVICYICGKEFGTLSLPIHEPKC 243
Cdd:pfam13913   2 LVPCPICGRTFNPDRLAKHEKIC 24
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH