|
Name |
Accession |
Description |
Interval |
E-value |
| GOLGA2L5 |
pfam15070 |
Putative golgin subfamily A member 2-like protein 5; The function of the GOLGA2L5 protein ... |
381-904 |
0e+00 |
|
Putative golgin subfamily A member 2-like protein 5; The function of the GOLGA2L5 protein family remains unknown. This family of proteins is thought to be found in the Golgi apparatus of eukaryotes.
Pssm-ID: 464485 [Multi-domain] Cd Length: 521 Bit Score: 710.29 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 381 QLMESLKQLQVERDQYAENLKGESAMWQQRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQMEEPPPPEPP--TGP 458
Cdd:pfam15070 1 QLMESLKQLQTERDQYAENLKEEGAVWQQKMQQLSEQVRTLREEKERSVSQVQELETSLAELKNQAAVPPAEEEQppAGP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 459 SEAEERLQGEVEQLQKELEGLTGQLRAQVQDNESLSHLNREQEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISRA 538
Cdd:pfam15070 81 SEEEQRLQEEAEQLQKELEALAGQLQAQVQDNEQLSRLNQEQEQRLLELERAAERWGEQAEDRKQILEDMQSDRATISRA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 539 LSQNRELKEQLAELQNGFVRLTNENMEITSALQSEQHVKKELARKLGELQERLGELKETVELKSQEAQGLQEQRDQCLSH 618
Cdd:pfam15070 161 LSQNRELKEQLAELQNGFVKLTNENMELTSALQSEQHVKKELAKKLGQLQEELGELKETLELKSQEAQSLQEQRDQYLAH 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 619 LQQYAAAYQqhltayeQLTSEKEALHKQLLLQTQLMDQLQHEEVQGKMAAEMARQELQEAQERLKASSQENQQLQAQLSL 698
Cdd:pfam15070 241 LQQYVAAYQ-------QLASEKEELHKQYLLQTQLMDRLQHEEVQGKVAAEMARQELQETQERLEALTQQNQQLQAQLSL 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 699 LVLPGE--DMDQEEQDEEVPQPSLTIPEDLVSREAMVAFCNAAIARAEEEQARLRVQLREQKARCRSLAHLAAPVQSKLE 776
Cdd:pfam15070 314 LANPGEgdGLESEEEEEEAPRPSLSIPEDFESREAMVAFFNSALAQAEEERAELRRQLKEQKRRCRRLAQQAAPAQEEPE 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 777 KEAVVPRDMGDSVSEESNQALHVAMEKLQNRFLEVMQEKVELKERVEELEHCCIQLSGETDTIGEYIALYQNQRAVLKAR 856
Cdd:pfam15070 394 HEAHAPGTGGDSVPVEVHQALQVAMEKLQSRFTELMQEKADLKERVEELEHRCIQLSGETDTIGEYIALYQSQRAILKQR 473
|
490 500 510 520
....*....|....*....|....*....|....*....|....*...
gi 939108073 857 HLEKEEYISRLAQDKEEMKVKLLELQELVLRLVNERNEWQGKFLAVSQ 904
Cdd:pfam15070 474 HREKEEYISRLAQDKEEMKVKLLELQELVLRLVGERNEWYGKYLAAAQ 521
|
|
| GM130_C |
pfam19046 |
GM130 C-terminal binding motif; This entry represents the C-terminal motif from the GM130 ... |
949-994 |
2.84e-27 |
|
GM130 C-terminal binding motif; This entry represents the C-terminal motif from the GM130 protein that is bound by the GRASP65 PDZ domain pfam04495.
Pssm-ID: 465957 Cd Length: 46 Bit Score: 104.77 E-value: 2.84e-27
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 939108073 949 APQENPTAQQIMQLLREIQNPQERPGLGSNPCIPFFYRADENDEVK 994
Cdd:pfam19046 1 SPPENPTAQQIMQLLPEIQNPQEHPGLGSNPCIPFFYRADENDEVK 46
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
265-894 |
5.65e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 99.24 E-value: 5.65e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 265 VGELERTLSTVSTQQKQADRYnKDLTKERDALKLELYknGKSNEDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEM 344
Cdd:COG1196 195 LGELERQLEPLERQAEKAERY-RELKEELKELEAELL--LLKLRELEAELEELEAELEELEAELEELEAELAELEAELEE 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 345 SELLLQQFSSQSEASGsnEQLQQAMEERAQLESHVGQLMESLKQLQVERDQYAEnlkgESAMWQQRVQQMAEQVHALKEE 424
Cdd:COG1196 272 LRLELEELELELEEAQ--AEEYELLAELARLEQDIARLEERRRELEERLEELEE----ELAELEEELEELEEELEELEEE 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 425 KEQRESQVQELEASLAELRSQMeeppppepptgpSEAEERLQGEVEQLQKELEGLTGQLRAQVQDNESLSHLNREQEGRL 504
Cdd:COG1196 346 LEEAEEELEEAEAELAEAEEAL------------LEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALL 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 505 LELEREAQHWSEQAEERKQILESMQSDRTTISRALSQNRELKEQLAELQngfvrltnenmeitSALQSEQHVKKELARKL 584
Cdd:COG1196 414 ERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALL--------------ELLAELLEEAALLEAAL 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 585 GELQERLGELKETVELKSQEAQGLQEQRDQCLSHLQQYAAAYQQHLTAYEQLTSEKEALHKQLLLQTQLMDQLQHEEVQG 664
Cdd:COG1196 480 AELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVA 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 665 KMAAEMARQELQEAQERLKASSQENQQLQAQLSLLVLPGEDMDQEEQD-EEVPQPSLTIPEDLVSREAMVAFCNAAIARA 743
Cdd:COG1196 560 AAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDlREADARYYVLGDTLLGRTLVAARLEAALRRA 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 744 EEEQARLRVQLreqkarcrslahLAAPVQSKLEKEAVVPRDMGDSVSEESNQALHVAMEKLQNRFLEVMQEKVELKERVE 823
Cdd:COG1196 640 VTLAGRLREVT------------LEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEER 707
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 939108073 824 ELEHCCIQLSGETDTIGEYIALYQNQRAVLKARHLEKEEYISRLAQDKEEMKVKLLELQELVLRLVNERNE 894
Cdd:COG1196 708 ELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
180-715 |
7.08e-17 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 86.14 E-value: 7.08e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 180 IEELKQQNQDTLDQLEKEKKDYQQKLAKEQGALREQLQVHiqtigilvsekAELQTALAHTQQAARQKAGESEDLASRLQ 259
Cdd:COG1196 237 LEAELEELEAELEELEAELEELEAELAELEAELEELRLEL-----------EELELELEEAQAEEYELLAELARLEQDIA 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 260 SSRQRVGELERTLSTVSTQQKQADRYNKDLTKERDALKLELYKNGKSNEDLRQQNSELEEKLRVLVAEKAAAQlgAEELQ 339
Cdd:COG1196 306 RLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAE--EELEE 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 340 KKLEMSELLLQQFSSQSEASGSNEQLQQAMEERAQLESHVGQLMESLKQLQVERDQYAENLKGESAMW---QQRVQQMAE 416
Cdd:COG1196 384 LAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEaelEEEEEALLE 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 417 QVHALKEEKEQRESQVQELE------ASLAELRSQMEEPPPPEPPTGPSEAEERLQGEVEQLQKELEGLTGQLRAQVQDN 490
Cdd:COG1196 464 LLAELLEEAALLEAALAELLeelaeaAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAA 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 491 ESLSHLNREQEgRLLELEREAQHWSEQAEERKQILESMQSDRTTISRALSQNRE-------LKEQLAELQNGFVRLTNEN 563
Cdd:COG1196 544 LAAALQNIVVE-DDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAigaavdlVASDLREADARYYVLGDTL 622
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 564 MEITSALQSEQHVKKELARKLGELQERLGELKETVELKSQEAQGLQEQRDQCLSHLQQYAAAYQQHLTAYEQLTSEKEAL 643
Cdd:COG1196 623 LGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAE 702
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 939108073 644 HKQLLLQTQLMDQLQHEEVQgkmAAEMARQELQEAQERLKAssQENQQLQAQLSLLVLPGEDMDQEEQDEEV 715
Cdd:COG1196 703 EEEERELAEAEEERLEEELE---EEALEEQLEAEREELLEE--LLEEEELLEEEALEELPEPPDLEELEREL 769
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
153-684 |
6.02e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 83.06 E-value: 6.02e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 153 KELESRYQELAVALDSSYVTNKQLSSTIEELKQQNQDTLDQLEKEKKDYQQkLAKEQGALREQLQVHIQTIGILVSEKAE 232
Cdd:COG1196 242 EELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYE-LLAELARLEQDIARLEERRRELEERLEE 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 233 LQTALAHTQQAARQKAGESEDLASRLQSSRQRVGELERTLSTVSTQQKQADRYNKDLTKERDALKLELY--------KNG 304
Cdd:COG1196 321 LEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLealraaaeLAA 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 305 KSNEDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEMSELLLQQfssQSEASGSNEQLQQAMEERAQLESHVGQLME 384
Cdd:COG1196 401 QLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEA---AEEEAELEEEEEALLELLAELLEEAALLEA 477
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 385 SLKQLQVERDQYAENLKGESAMwQQRVQQMAEQVHALKEEKEQR--ESQVQELEASLAELRSQMEEPPPPEPPTGPSEAE 462
Cdd:COG1196 478 ALAELLEELAEAAARLLLLLEA-EADYEGFLEGVKAALLLAGLRglAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDD 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 463 ERLQGEVEQLQKELEGLTGQLRAQVQDNESLSHLNREQeGRLLELEREAQHWSEQAEERKQILESMQSDRTTISRALSQN 542
Cdd:COG1196 557 EVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALAR-GAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAA 635
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 543 RELKEQLAElqnGFVRLTNENMEITSALQSEQHVKKELARKLGELQERLGELKETVELKSQEAQGLQEQRDQCLSHLQQY 622
Cdd:COG1196 636 LRRAVTLAG---RLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEA 712
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 939108073 623 AAAYQQHLTAYEQLTSEKEALHKQLLLQTQLMDQLQHEEVQGKMAAEMARQELQEAQERLKA 684
Cdd:COG1196 713 EEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLER 774
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
265-591 |
9.75e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 82.41 E-value: 9.75e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 265 VGELERTLSTVSTQQKQADRYnKDLTKERDALKLELYknGKSNEDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEM 344
Cdd:TIGR02168 195 LNELERQLKSLERQAEKAERY-KELKAELRELELALL--VLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEE 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 345 SELLLQQ------------FSSQSEASGSNEQLQQAMEERAQLESHVGQLMESLKQLQVERDQYAENLkgesAMWQQRVQ 412
Cdd:TIGR02168 272 LRLEVSEleeeieelqkelYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEEL----AELEEKLE 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 413 QMAEQVHALKEEKEQRESQVQELEASLAELRSQMEEPPPPEPPTgpSEAEERLQGEVEQLQKELEGLTGQLRAQVQDNES 492
Cdd:TIGR02168 348 ELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQL--ELQIASLNNEIERLEARLERLEDRRERLQQEIEE 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 493 L-----SHLNREQEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISRALSQNRELKEQLAELQNGFVRLTNENMEIT 567
Cdd:TIGR02168 426 LlkkleEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFS 505
|
330 340
....*....|....*....|....
gi 939108073 568 SALQSEQHVKKELARKLGELQERL 591
Cdd:TIGR02168 506 EGVKALLKNQSGLSGILGVLSELI 529
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
154-688 |
5.62e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 80.10 E-value: 5.62e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 154 ELESRYQELAVALDSSYVTNKQLSSTIEELKQQNQDTLDQLEKEKKDYQQkLAKEQGALREQLQVHIQTIGILVSEKAEL 233
Cdd:TIGR02168 299 RLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEE-LKEELESLEAELEELEAELEELESRLEEL 377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 234 QTALAHTQQAARQKAGESEDLASRLQSSRQRV----GELERTLSTVSTQQKQADRYNKDLTKER-DALKLELYKNGKSNE 308
Cdd:TIGR02168 378 EEQLETLRSKVAQLELQIASLNNEIERLEARLerleDRRERLQQEIEELLKKLEEAELKELQAElEELEEELEELQEELE 457
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 309 DLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEMSELLLQQFS-----------SQSEASGSNEQLQQAMEERAQLE- 376
Cdd:TIGR02168 458 RLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEgfsegvkallkNQSGLSGILGVLSELISVDEGYEa 537
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 377 ------------------SHVGQLMESLKQ----------LQVERDQYAENLKGESAMWQ-------------------- 408
Cdd:TIGR02168 538 aieaalggrlqavvvenlNAAKKAIAFLKQnelgrvtflpLDSIKGTEIQGNDREILKNIegflgvakdlvkfdpklrka 617
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 409 -----------QRVQQMAEQVHALKEE--------------------KEQRESQVQELEASLAELRSQMEEPPppepptg 457
Cdd:TIGR02168 618 lsyllggvlvvDDLDNALELAKKLRPGyrivtldgdlvrpggvitggSAKTNSSILERRREIEELEEKIEELE------- 690
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 458 psEAEERLQGEVEQLQKELEGLTGQLRAQVQDNESLSHLNREQEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISR 537
Cdd:TIGR02168 691 --EKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEE 768
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 538 ALSQNR----ELKEQLAELQNGFVRLTNENMEITSALQSEQHVKKELARKLGELQERLGELKETVELKSQEAQGLQEQRD 613
Cdd:TIGR02168 769 RLEEAEeelaEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIE 848
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 614 QCLSHLQQYAAAYQQHLTAYEQLTSEKEALHKQLLLQTQLMDQLQHE-----EVQGKMAAEM--ARQELQEAQERLKASS 686
Cdd:TIGR02168 849 ELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSEleelsEELRELESKRseLRRELEELREKLAQLE 928
|
..
gi 939108073 687 QE 688
Cdd:TIGR02168 929 LR 930
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
308-606 |
6.13e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 76.63 E-value: 6.13e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 308 EDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEmsELLLQQFSSQSEASGSNEQLQQAMEERAQLESHVGQLMESLK 387
Cdd:TIGR02168 680 EELEEKIEELEEKIAELEKALAELRKELEELEEELE--QLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELT 757
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 388 QLQVERDQYAENLKGESAMWQQRVQQMAEqvhaLKEEKEQRESQVQELEASLAELRSQMEEPPPPEPPTgpSEAEERLQG 467
Cdd:TIGR02168 758 ELEAEIEELEERLEEAEEELAEAEAEIEE----LEAQIEQLKEELKALREALDELRAELTLLNEEAANL--RERLESLER 831
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 468 EVEQLQKELEGLTGQLRAQVQDNESLSHLNREQEGRLLELEREAQHWSEQ----AEERKQILESMQSDRTTISRALSQNR 543
Cdd:TIGR02168 832 RIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNEraslEEALALLRSELEELSEELRELESKRS 911
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 939108073 544 ELKEQLAELQNgfvRLTNENMEITSALQSEQHVKKELARKLGELQERLGELKETVELKSQEAQ 606
Cdd:TIGR02168 912 ELRRELEELRE---KLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEAR 971
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
151-445 |
5.63e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 73.55 E-value: 5.63e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 151 NMKELESRYQELAVALDSSYVTNKQLSSTIEELKQQNQDTLDQLEKEKKDYQqKLAKEQGALREQLQVHIQTIGILVSEK 230
Cdd:TIGR02168 685 KIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLA-RLEAEVEQLEERIAQLSKELTELEAEI 763
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 231 AELQTALAHTQQAARQKAGESEDLASRLQSSRQRVGELERTLSTVSTQQKQADRYNKDLTKERDALKLELYKNGKSNEDL 310
Cdd:TIGR02168 764 EELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDL 843
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 311 RQQNSELEEKLRVLVAEKAAAQLGAEELQKKLemsELLLQQFSSQSEASGS-NEQLQQAMEERAQLESHVGQLMESLKQL 389
Cdd:TIGR02168 844 EEQIEELSEDIESLAAEIEELEELIEELESEL---EALLNERASLEEALALlRSELEELSEELRELESKRSELRRELEEL 920
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 390 QVERDQYAENLKGESAMWQQRVQQMAEQVH----ALKEEKEQRESQVQELEASLAELRSQ 445
Cdd:TIGR02168 921 REKLAQLELRLEGLEVRIDNLQERLSEEYSltleEAEALENKIEDDEEEARRRLKRLENK 980
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
121-682 |
3.02e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 71.12 E-value: 3.02e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 121 TESLRQLSQQLNGLVSESTSYINGEGLTSSNMKELESRYQELAVALDssyvtnkQLSSTIEELKQQNQDTLDQLEKEKKD 200
Cdd:COG1196 280 ELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELA-------ELEEELEELEEELEELEEELEEAEEE 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 201 YQQKLAKEQGALREQLQvhiqtigiLVSEKAELQTALAHTQQAARQKAGESEDLASRLQSSRQRVGELERTLSTVSTQQK 280
Cdd:COG1196 353 LEEAEAELAEAEEALLE--------AEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELE 424
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 281 QADRYNKDLTKERDALKLELykngksnedlrqqnSELEEKLRVLVAEKAAAQLGAEELQKKLEMSELLLQQFSSQSEASG 360
Cdd:COG1196 425 ELEEALAELEEEEEEEEEAL--------------EEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAA 490
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 361 SNEQLQQAMEERAQLESHVGQLMESLKQLQVERDQYAENLKGESAMWQQRVQQMAEQVHALKEEKEQRESQVQELEASLA 440
Cdd:COG1196 491 ARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAK 570
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 441 ELRSQMEEPPPPEPPTGPSEAEERLQGEVEQLQKELEGLTGQLRAQVQDNESLshlnrEQEGRLLELEREAQHWSEQAEE 520
Cdd:COG1196 571 AGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLL-----GRTLVAARLEAALRRAVTLAGR 645
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 521 RKQILESMQSDRTTISRALSQNRELKEQLAELQNGFVRLTNENMEITSALQSEQHVKKELARKLGELQERLGELKETVEL 600
Cdd:COG1196 646 LREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEA 725
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 601 KSQEAQGLQEQRDQclsHLQQYAAAYQQHLTAYEQLTSEKEALHKQLLLQTQLMDQLqheevqGK--MAAEmarQELQEA 678
Cdd:COG1196 726 LEEQLEAEREELLE---ELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL------GPvnLLAI---EEYEEL 793
|
....
gi 939108073 679 QERL 682
Cdd:COG1196 794 EERY 797
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
242-625 |
1.16e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 68.94 E-value: 1.16e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 242 QAARQKAGESEDLASRLQSsrqRVGELERTLSTVSTQQKQADRYNKDLTKERDalkLELYKNGKSNEDLRQQNSELEEKL 321
Cdd:TIGR02169 173 EKALEELEEVEENIERLDL---IIDEKRQQLERLRREREKAERYQALLKEKRE---YEGYELLKEKEALERQKEAIERQL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 322 RVLVAEKAAAQLGAEELQKKLEMSELLLQQFSSQSEASGSNEQLQ-------------QAMEERAQLESHVGQLMESLKQ 388
Cdd:TIGR02169 247 ASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRvkekigeleaeiaSLERSIAEKERELEDAEERLAK 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 389 LQVERDQY---AENLKGESAMWQQRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQMEEPPPPEPPTGpsEAEERL 465
Cdd:TIGR02169 327 LEAEIDKLlaeIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLK--REINEL 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 466 QGEVEQLQKELEGLTGQLRAQVQDNESLshlnreqEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISRALSQnreL 545
Cdd:TIGR02169 405 KRELDRLQEELQRLSEELADLNAAIAGI-------EAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYD---L 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 546 KEQLAELQNgfvrltnenmEITSAlqseqhvKKELARKLGELQ---ERLGELKETVELKSQEAQGLQEQRDQCLSHLQQY 622
Cdd:TIGR02169 475 KEEYDRVEK----------ELSKL-------QRELAEAEAQARaseERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERY 537
|
...
gi 939108073 623 AAA 625
Cdd:TIGR02169 538 ATA 540
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
158-914 |
2.23e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 68.16 E-value: 2.23e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 158 RYQELAVALDssyvtNKQLSSTIEELKQQNqDTLDQLEKEKKDYQQKLAKEQgalreqlqvhiqtigilvSEKAELQTAL 237
Cdd:TIGR02168 214 RYKELKAELR-----ELELALLVLRLEELR-EELEELQEELKEAEEELEELT------------------AELQELEEKL 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 238 AHTQQAARQKAGESEDLASRLQSSRQRVGELERtlstvstQQKQADRYNKDLTKERDALKLELYKNGKSNEDLRQQNSEL 317
Cdd:TIGR02168 270 EELRLEVSELEEEIEELQKELYALANEISRLEQ-------QKQILRERLANLERQLEELEAQLEELESKLDELAEELAEL 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 318 EEKLRVLVAEKAAAQLGAEELQKKLEMSELLLQQFSSQSEAsgSNEQLQQAMEERAQLESHVGQLMESLKQLQVERDQYA 397
Cdd:TIGR02168 343 EEKLEELKEELESLEAELEELEAELEELESRLEELEEQLET--LRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQ 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 398 ENLKG-ESAMWQQRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQMEEPPPPEPPTGPSEAEERLQGEV-EQLQKE 475
Cdd:TIGR02168 421 QEIEElLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSlERLQEN 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 476 LEGLTGQLRAQVQDNESLSHLnreqEGRLLELEREAQHWS-------------------EQAEERKQILESMQSDRTTI- 535
Cdd:TIGR02168 501 LEGFSEGVKALLKNQSGLSGI----LGVLSELISVDEGYEaaieaalggrlqavvvenlNAAKKAIAFLKQNELGRVTFl 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 536 ---SRALSQNRELKEQLAELQNGFVRLTNE-----------------NMEITSALQSEQHVKKELARKL------GELQE 589
Cdd:TIGR02168 577 pldSIKGTEIQGNDREILKNIEGFLGVAKDlvkfdpklrkalsyllgGVLVVDDLDNALELAKKLRPGYrivtldGDLVR 656
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 590 RLGelkeTVELKSQEAQGLQEQRDQCLSHLQQyaaayqqhltAYEQLTSEKEALHKQLLLQTQLMDQLQHEEVQGKMAAE 669
Cdd:TIGR02168 657 PGG----VITGGSAKTNSSILERRREIEELEE----------KIEELEEKIAELEKALAELRKELEELEEELEQLRKELE 722
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 670 MARQELQEAQERLKASSQENQQLQAQLSLLVLpgEDMDQEEQDEEVPQPSLTIPEDLVSREAMVAFCNAAIARAEEEQAR 749
Cdd:TIGR02168 723 ELSRQISALRKDLARLEAEVEQLEERIAQLSK--ELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKA 800
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 750 LRVQLREQKARCRSLAHLAAPVQSKLEKEAvvpRDMGDsvSEESNQALHVAMEKLQNRFLEVMQEKVELKERVEELEHCC 829
Cdd:TIGR02168 801 LREALDELRAELTLLNEEAANLRERLESLE---RRIAA--TERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESEL 875
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 830 IQLSGETDTIGEYIALYQNQRAVLKARHLEKEEYISRLAQDKEEMKVKLLELQELVLRLVNERNEWQGKFLAVSQNPADV 909
Cdd:TIGR02168 876 EALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEE 955
|
....*
gi 939108073 910 PAPVP 914
Cdd:TIGR02168 956 AEALE 960
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
175-614 |
2.71e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 64.78 E-value: 2.71e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 175 QLSSTIEELKQQNQDTLDQLEKEKKDYQQKLAKEQGALREQLQVHIQtigilvSEKAELQTALAHTQQAARQKAGESEDL 254
Cdd:PTZ00121 1319 EAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEK------AEAAEKKKEEAKKKADAAKKKAEEKKK 1392
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 255 ASRLQSSRQRVGELERTLSTVSTQQKQADRYNKDLTKERDALKL-----------ELYKNGKSNEDLRQQNSELEEKLRV 323
Cdd:PTZ00121 1393 ADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAkkkaeeakkadEAKKKAEEAKKAEEAKKKAEEAKKA 1472
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 324 LVAEKAAAQL-GAEELQKKLEMSELLLQQFSSQSEASGSNEQLQQAMEERAQLESHVGQLMESLKQL-QVERDQYAENLK 401
Cdd:PTZ00121 1473 DEAKKKAEEAkKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAkKAEEKKKADELK 1552
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 402 GESAMWQQRVQQMAEQVHALKEEKEQRESQVQEL----EASLAELRSQMEEPPPPEPPTGPSEAEERLQGE----VEQLQ 473
Cdd:PTZ00121 1553 KAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAkkaeEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEelkkAEEEK 1632
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 474 KELEGLTGQLRAQVQDNESLSHLNREQEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISRALSQNR---ELKEQLA 550
Cdd:PTZ00121 1633 KKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKkaeELKKKEA 1712
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 939108073 551 ELQNGFVRLTNENMEITSALQSEQHVKKELARKLGELQERLGELKETVELKSQEAQGLQEQRDQ 614
Cdd:PTZ00121 1713 EEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKE 1776
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
178-894 |
7.91e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 63.16 E-value: 7.91e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 178 STIEELKQQNQDTLDQLEKEKKDYQQKL---AKEQGALREQLQVHIQTigilvsEKAELQTALAHTQQAARQKAGESEDL 254
Cdd:TIGR02169 247 ASLEEELEKLTEEISELEKRLEEIEQLLeelNKKIKDLGEEEQLRVKE------KIGELEAEIASLERSIAEKERELEDA 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 255 ASRLQSSRQRVGELERTLSTVSTQQKQadrynkdLTKERDALKLELYKNGKSNEDLRQQNSELEEKLRVLVAEKAAAQLG 334
Cdd:TIGR02169 321 EERLAKLEAEIDKLLAEIEELEREIEE-------ERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREK 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 335 AEELQKKLEmselllqqfSSQSEASGSNEQLQQAMEERAQLESHVGQLMESLKQLQVERDQYAENLKGEsamwQQRVQQM 414
Cdd:TIGR02169 394 LEKLKREIN---------ELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQ----EWKLEQL 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 415 AEQVHALKEEKEQRESQVQELEASLAELRSQMEEPPPPEPPTGPSEAEERLQGEV-------------------EQLQKE 475
Cdd:TIGR02169 461 AADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVlkasiqgvhgtvaqlgsvgERYATA 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 476 LE-GLTGQLRAQVQDNES-----LSHLNREQEGR------------------------------LLELEREAQHWSEQAE 519
Cdd:TIGR02169 541 IEvAAGNRLNNVVVEDDAvakeaIELLKRRKAGRatflplnkmrderrdlsilsedgvigfavdLVEFDPKYEPAFKYVF 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 520 ERKQILESMQSDR--TTISRALSQNRELKEQLAELQNGFVrltnenmeitsALQSEQHVKKELARKLGELQERLGELKET 597
Cdd:TIGR02169 621 GDTLVVEDIEAARrlMGKYRMVTLEGELFEKSGAMTGGSR-----------APRGGILFSRSEPAELQRLRERLEGLKRE 689
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 598 VELKSQEAQGLQEQRDQCLSHLQqyaAAYQQHLTAYEQLTSEKEALHKQLLLQTQLMDQLQH-----EEVQGKMAAEMAR 672
Cdd:TIGR02169 690 LSSLQSELRRIENRLDELSQELS---DASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSleqeiENVKSELKELEAR 766
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 673 -QELQEAQERLKASSQENQQLQAQLSLLVLPGEDMDQEEQDEEVPQPSLTIPEDLVSREAMVAFCNAAIARAEEEQARLR 751
Cdd:TIGR02169 767 iEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLK 846
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 752 VQLREQKARCRSLAHLAAPVQSKLEKEAVVPRDMGDSVSEESNQALHV--AMEKLQNRFLEVMQEKVELKERVEELEHCC 829
Cdd:TIGR02169 847 EQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELeaQLRELERKIEELEAQIEKKRKRLSELKAKL 926
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 939108073 830 IQLSGETDTIGEYIALYQNQRA------VLKARHLEKEEYISRLA-------QDKEEMKVKLLELQELVLRLVNERNE 894
Cdd:TIGR02169 927 EALEEELSEIEDPKGEDEEIPEeelsleDVQAELQRVEEEIRALEpvnmlaiQEYEEVLKRLDELKEKRAKLEEERKA 1004
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
175-646 |
1.36e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 62.36 E-value: 1.36e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 175 QLSSTIEELKQQN-QDTLDQLEKEKKDYQQKL---------AKEQ-GALREQLQVHIQTIgilvSEKAELQTALAHTQQA 243
Cdd:PRK02224 191 QLKAQIEEKEEKDlHERLNGLESELAELDEEIeryeeqreqARETrDEADEVLEEHEERR----EELETLEAEIEDLRET 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 244 ARQKAGESEDLASRLQSSRQRVGELERTLSTV-------STQQKQADRYNKDLTKERDALKLELYKNGKSNEDLRQQNSE 316
Cdd:PRK02224 267 IAETEREREELAEEVRDLRERLEELEEERDDLlaeagldDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAES 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 317 LEEKLRVLVAEKAAAQLGAEELQKKLEMSELLLQQFSSQSEAsgSNEQLQQAMEERAQLESHVGQLMESLKQLQVERDQY 396
Cdd:PRK02224 347 LREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEE--LEEEIEELRERFGDAPVDLGNAEDFLEELREERDEL 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 397 AENLKGESAMWQQRVQQMAEQVHALKEEK-----------------EQRESQVQELEASLAELRSQMEEPPPP-EPPTGP 458
Cdd:PRK02224 425 REREAELEATLRTARERVEEAEALLEAGKcpecgqpvegsphvetiEEDRERVEELEAELEDLEEEVEEVEERlERAEDL 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 459 SEAEERLQgEVEQLQKELEGLTGQLRAQV-QDNESLSHLNREQEgrllELEREAQHWSEQAEERKQILESMQSDRTTISR 537
Cdd:PRK02224 505 VEAEDRIE-RLEERREDLEELIAERRETIeEKRERAEELRERAA----ELEAEAEEKREAAAEAEEEAEEAREEVAELNS 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 538 ALSQNRELKEQLAELQNGFVRLTNenmeITSALQSEQHVKKELARKLGELQERLGELKETvelKSQEAQGLQEQRDQCLS 617
Cdd:PRK02224 580 KLAELKERIESLERIRTLLAAIAD----AEDEIERLREKREALAELNDERRERLAEKRER---KRELEAEFDEARIEEAR 652
|
490 500 510
....*....|....*....|....*....|
gi 939108073 618 HLQQYAAAYQQHLTAY-EQLTSEKEALHKQ 646
Cdd:PRK02224 653 EDKERAEEYLEQVEEKlDELREERDDLQAE 682
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
363-605 |
5.93e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 60.31 E-value: 5.93e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 363 EQLQQAMEERAQLESHVGQLMESLKQLQVERDQYAENLkgesamWQQRVQQMAEQVHALKEEKEQRESQVQELEASLAEL 442
Cdd:COG4913 255 EPIRELAERYAAARERLAELEYLRAALRLWFAQRRLEL------LEAELEELRAELARLEAELERLEARLDALREELDEL 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 443 RSQMEEPpppepptgPSEAEERLQGEVEQLQKELEGLTGQLRAQVQDNESLSHLNREQEGRLLELEREAQHWSEQAEERK 522
Cdd:COG4913 329 EAQIRGN--------GGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEEL 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 523 QILEsmqsdrTTISRALSQNRELKEQLAELQNGFVRLTNENMEITSALqseQHVKKELARKLGELQERL---GELketVE 599
Cdd:COG4913 401 EALE------EALAEAEAALRDLRRELRELEAEIASLERRKSNIPARL---LALRDALAEALGLDEAELpfvGEL---IE 468
|
....*.
gi 939108073 600 LKSQEA 605
Cdd:COG4913 469 VRPEEE 474
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
180-688 |
9.53e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 59.54 E-value: 9.53e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 180 IEELKQQnQDTLDQLEKEKKDYQQKLAK--EQGALREQLQVHIQTIgilvsEKAELQTALAHTQQAARQKAGESEDLASR 257
Cdd:COG4913 244 LEDAREQ-IELLEPIRELAERYAAARERlaELEYLRAALRLWFAQR-----RLELLEAELEELRAELARLEAELERLEAR 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 258 LQSSRQRVGELERTLSTVSTQQKQadrynkDLTKERDALKLELykngksnEDLRQQNSELEEKLRVLvaeKAAAQLGAEE 337
Cdd:COG4913 318 LDALREELDELEAQIRGNGGDRLE------QLEREIERLEREL-------EERERRRARLEALLAAL---GLPLPASAEE 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 338 LQKKLEMSELLLQQFSSQSEA------------SGSNEQLQQAMEERAQLESHVGQLMESLKQLqveRDQYAENL----- 400
Cdd:COG4913 382 FAALRAEAAALLEALEEELEAleealaeaeaalRDLRRELRELEAEIASLERRKSNIPARLLAL---RDALAEALgldea 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 401 -----------KGESAMWQ------------------QRVQQMAEQVHALK----------EEKEQRESQVQELEASLAE 441
Cdd:COG4913 459 elpfvgelievRPEEERWRgaiervlggfaltllvppEHYAAALRWVNRLHlrgrlvyervRTGLPDPERPRLDPDSLAG 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 442 lrsqmeeppppEPPTGPSEAEERLQGE------------VEQLQKELEGLT--GQL-----RAQVQDNESLSHL------ 496
Cdd:COG4913 539 -----------KLDFKPHPFRAWLEAElgrrfdyvcvdsPEELRRHPRAITraGQVkgngtRHEKDDRRRIRSRyvlgfd 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 497 NREQ----EGRLLELEREAQHWSEQAEERKQILESMQSDRTTISRALSQN------RELKEQLAELQNGFVRLTNENMEI 566
Cdd:COG4913 608 NRAKlaalEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSwdeidvASAEREIAELEAELERLDASSDDL 687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 567 tsalqseqhvkKELARKLGELQERLGELKETVELKSQEAQGLQEQRDQCLSHLQQYAAAYQQhltayeqlTSEKEALHKQ 646
Cdd:COG4913 688 -----------AALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEA--------AEDLARLELR 748
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 939108073 647 LLLQTQLmDQLQHEEVQGKMAAEMaRQELQEAQERLKASSQE 688
Cdd:COG4913 749 ALLEERF-AAALGDAVERELRENL-EERIDALRARLNRAEEE 788
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
154-683 |
1.09e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 59.36 E-value: 1.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 154 ELESRYQELAVALDSSYVTNKQLSSTIEELKQQNQDTLDQLEKEKKDYQQKLAKEQGALREQLQVHIQTIGILvsekAEL 233
Cdd:pfam15921 114 DLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVL----QEI 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 234 QTALAHTQQAARQKAGESEDLAS-RLQSSRQRVGELERTLSTVSTQQKQ-----ADRYNKDLTKERDALKLELYKNgksN 307
Cdd:pfam15921 190 RSILVDFEEASGKKIYEHDSMSTmHFRSLGSAISKILRELDTEISYLKGrifpvEDQLEALKSESQNKIELLLQQH---Q 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 308 EDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEMselllqqfsSQSEASGSNEQLqqaMEERAQLESHVGQLMESLK 387
Cdd:pfam15921 267 DRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEI---------IQEQARNQNSMY---MRQLSDLESTVSQLRSELR 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 388 QLQVERDQYAENLKGESAMWQQRVQQMAEQVHALKEEKEQRESQVQELEASLaelrsqmeeppppepptgpSEAEERLQG 467
Cdd:pfam15921 335 EAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADL-------------------HKREKELSL 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 468 EVEQLQKELEGLTGqlraqvqDNESLSHLNREQEGRLLELER-EAQHWSEQAEERKQILESM---QSDRTTISRALSQNR 543
Cdd:pfam15921 396 EKEQNKRLWDRDTG-------NSITIDHLRRELDDRNMEVQRlEALLKAMKSECQGQMERQMaaiQGKNESLEKVSSLTA 468
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 544 ELKEQLAELQNGFVRLTNENMEITSALQSEQHVK---KELARKLGELQERLGELKETVELKSQEAQGLQEQRDQcLSHLQ 620
Cdd:pfam15921 469 QLESTKEMLRKVVEELTAKKMTLESSERTVSDLTaslQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDH-LRNVQ 547
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 939108073 621 QYAAAYQQHLTAYEQLTsekEALHKQLLLQTQLMDqlQHEEVQGKMAAEMARQELQEAQERLK 683
Cdd:pfam15921 548 TECEALKLQMAEKDKVI---EILRQQIENMTQLVG--QHGRTAGAMQVEKAQLEKEINDRRLE 605
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
180-420 |
1.31e-08 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 59.20 E-value: 1.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 180 IEELKQQNQDTLDQLEKEKKDYQQKLAKEQGALREqlqvHIQTIGILVSEKAELQTALAHtqQAARQ---KAGESEDLAS 256
Cdd:COG3096 439 AEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQ----FEKAYELVCKIAGEVERSQAW--QTAREllrRYRSQQALAQ 512
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 257 RLQSSRQRVGELERTLSTVSTQQKQADRYNKDLTKERDAlklelykngksNEDLRQQNSELEEKLRVLVAEKAAAQLGAE 336
Cdd:COG3096 513 RLQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLDA-----------AEELEELLAELEAQLEELEEQAAEAVEQRS 581
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 337 ELQKKLEMSELLLQQFSS--------QSEASGSNEQLQQAMEERAQLESHVGQLMESLKQLQVERDQYAENlkgesamwQ 408
Cdd:COG3096 582 ELRQQLEQLRARIKELAArapawlaaQDALERLREQSGEALADSQEVTAAMQQLLEREREATVERDELAAR--------K 653
|
250
....*....|..
gi 939108073 409 QRVQQMAEQVHA 420
Cdd:COG3096 654 QALESQIERLSQ 665
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
287-552 |
3.87e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 57.62 E-value: 3.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 287 KDLTKERDALKLELYKNGKSNEDLRQQNSELEEKLRVL--VAEKAAAQLGAEELQKKLEMSELLLQQFSS--------QS 356
Cdd:COG4913 613 AALEAELAELEEELAEAEERLEALEAELDALQERREALqrLAEYSWDEIDVASAEREIAELEAELERLDAssddlaalEE 692
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 357 EASGSNEQLQQAMEERAQLESHVGQLMESLKQLQVERDQYAENLKGESAMWQQRVQQMAEQVHALKEEKEQRESQVQELE 436
Cdd:COG4913 693 QLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLE 772
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 437 ASLAELRSQMeeppppepptgpSEAEERLQGEVEQLQKELEGLTGQLRAQVQDNES-LSHLNREQEGRLLELEREAqhws 515
Cdd:COG4913 773 ERIDALRARL------------NRAEEELERAMRAFNREWPAETADLDADLESLPEyLALLDRLEEDGLPEYEERF---- 836
|
250 260 270
....*....|....*....|....*....|....*...
gi 939108073 516 eqaeeRKQILESMQSDRTTISRALSQNREL-KEQLAEL 552
Cdd:COG4913 837 -----KELLNENSIEFVADLLSKLRRAIREiKERIDPL 869
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
250-757 |
5.77e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 56.85 E-value: 5.77e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 250 ESEDLASRLQSSRQRVGELERTLSTVSTQQKQ-------ADRYNKDLTK----ERDALKLELYKNGKSNEDLRQQNSELE 318
Cdd:COG4913 222 DTFEAADALVEHFDDLERAHEALEDAREQIELlepirelAERYAAARERlaelEYLRAALRLWFAQRRLELLEAELEELR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 319 EKLRVLVAEKAAAQLGAEELQKKLEMSELLLQQFSSQSEASgSNEQLQQAMEERAQLESHVGQLMESLKQLQV----ERD 394
Cdd:COG4913 302 AELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQ-LEREIERLERELEERERRRARLEALLAALGLplpaSAE 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 395 QYAEN---LKGESAMWQQRVQQMAEQVHALKEEKEQRESQVQELEASLAELRS--------QMEEPPPPEPPTGPSEAEE 463
Cdd:COG4913 381 EFAALraeAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERrksniparLLALRDALAEALGLDEAEL 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 464 RLQGEVEQLQKE-------LEGLTGQLR----------AQVqdnesLSHLNREQEGRLLELEREAQHWSEQAEER---KQ 523
Cdd:COG4913 461 PFVGELIEVRPEeerwrgaIERVLGGFAltllvppehyAAA-----LRWVNRLHLRGRLVYERVRTGLPDPERPRldpDS 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 524 ILESMQSDRTTISRALSQnrelkeqlaELQNGFVR--------LTNENMEITSALQ----SEQHVK-------------- 577
Cdd:COG4913 536 LAGKLDFKPHPFRAWLEA---------ELGRRFDYvcvdspeeLRRHPRAITRAGQvkgnGTRHEKddrrrirsryvlgf 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 578 ------KELARKLGELQERLGELKETVELKSQEAQGLQEQRDQcLSHLQQYAAAYQQHLTAYEQLtSEKEALHKQLLLQT 651
Cdd:COG4913 607 dnraklAALEAELAELEEELAEAEERLEALEAELDALQERREA-LQRLAEYSWDEIDVASAEREI-AELEAELERLDASS 684
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 652 QLMDQLQHEEVQGKMAAEMARQELQEAQERLKASSQENQQLQAQLSLLVLPGEDMDQEEQDEEVPQPSLTIPEDLV--SR 729
Cdd:COG4913 685 DDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGdaVE 764
|
570 580
....*....|....*....|....*...
gi 939108073 730 EAMVAFCNAAIARAEEEQARLRVQLREQ 757
Cdd:COG4913 765 RELRENLEERIDALRARLNRAEEELERA 792
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
195-714 |
2.16e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 55.15 E-value: 2.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 195 EKEKKDYQQKLAKEQGALREQLQVHIQTIGILVSEKAELQTALAHTQQAARQKAGESEDLASRLQSSRQRVGELERTlst 274
Cdd:PTZ00121 1234 EAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKK--- 1310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 275 vSTQQKQADRYNK---DLTKERDALKLELYKNGKSNEDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEMSELLLQQ 351
Cdd:PTZ00121 1311 -AEEAKKADEAKKkaeEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEE 1389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 352 FSSQSEASGSNEQLQQAMEERAQLESHVGQLMESLKQLQVERDQYAENLKGESAMWQQRVQQMAEQVHALKEEKEQRESQ 431
Cdd:PTZ00121 1390 KKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEA 1469
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 432 VQELEASLAELRSQMEEPPPPEPPTGPSEAEERLQGE-----VEQLQKELEGLTGQLRAQVQDNESLSHLNREQEGRLLE 506
Cdd:PTZ00121 1470 KKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAeakkkADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKAD 1549
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 507 LEREAQHwSEQAEERKQILESM--QSDRTTISRALSQNRELKEQLAELQNGFVRLTNENMEITSALQSEQHVKKELARKL 584
Cdd:PTZ00121 1550 ELKKAEE-LKKAEEKKKAEEAKkaEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKA 1628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 585 GELQERLGELKETVELKSQEAQGLQEQRDQCLSHLQQYAAAYQQHLTAYEQLTSEKEALHKQlllqtqlMDQLQHEEVQG 664
Cdd:PTZ00121 1629 EEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKA-------AEALKKEAEEA 1701
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 939108073 665 KMAAEMARQELQEAQ--ERLKASSQENQQLQAQLSLLVLPGEDMDQEEQDEE 714
Cdd:PTZ00121 1702 KKAEELKKKEAEEKKkaEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDE 1753
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
174-753 |
4.56e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 53.97 E-value: 4.56e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 174 KQLSSTIEELKQQNQDTLDQLEKEKKDYQQKLakeqgalREQLQVHIQTIGILVSEKAELQTALAHTQQAARQKAGESED 253
Cdd:pfam15921 227 RELDTEISYLKGRIFPVEDQLEALKSESQNKI-------ELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQS 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 254 LASRLQSSRQ--------RVGELERTLSTVSTQQKQADRYNKD----LTKERDALKLELYKNGKSNEDLRQQNSELEEKL 321
Cdd:pfam15921 300 QLEIIQEQARnqnsmymrQLSDLESTVSQLRSELREAKRMYEDkieeLEKQLVLANSELTEARTERDQFSQESGNLDDQL 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 322 RVLVAE--KAAAQLGAEELQKKlemselllQQFSSQSEASGSNEQLQQAMEERAQLESHVGQLMESLK---QLQVERDQY 396
Cdd:pfam15921 380 QKLLADlhKREKELSLEKEQNK--------RLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKsecQGQMERQMA 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 397 AENLKGES-----------AMWQQRVQQMAEQVHALKEEKEQRESQVQELEASLAElRSQMEEPPPPEPPTGPSEAEERL 465
Cdd:pfam15921 452 AIQGKNESlekvssltaqlESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQE-KERAIEATNAEITKLRSRVDLKL 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 466 QgEVEQLQKELEGLTG------QLRAQVQDNESLSHLNREQEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISRAL 539
Cdd:pfam15921 531 Q-ELQHLKNEGDHLRNvqteceALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEF 609
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 540 --------SQNRELKEQLAELQNGFVRLTNENMEITSALQSEQHVKKELARKLGELQERLGELKETVELKSQEAQGLQEQ 611
Cdd:pfam15921 610 kilkdkkdAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEE 689
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 612 RDQCLSHLQQYAAAYQQHLTAYEQLTSEKEA-----------LHKQLLLQTQLMDQLQHEEVQGKMAAEMARQELQEAQE 680
Cdd:pfam15921 690 METTTNKLKMQLKSAQSELEQTRNTLKSMEGsdghamkvamgMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKE 769
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 939108073 681 RLKASSQENQQLQAQLSLLVLPGEDMDQEEQDEEVPQPSLTIPEDLVSREamVAFCNAAIARAEEEQARLRVQ 753
Cdd:pfam15921 770 EKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQ--FAECQDIIQRQEQESVRLKLQ 840
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
460-826 |
4.78e-07 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 54.19 E-value: 4.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 460 EAEERLQGEVEQL----------QKELEGLTGQLRAQVQDNESLS-HLNREQEG---------RLLELEREAQHWSEQAE 519
Cdd:COG3096 289 ELRRELFGARRQLaeeqyrlvemARELEELSARESDLEQDYQAASdHLNLVQTAlrqqekierYQEDLEELTERLEEQEE 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 520 ERKQILESMQSDRTTISRALSQNRELKEQLAELQNGFvrltneNMEITSALQSEQHVK-KELARKLGELQERLGE-LKET 597
Cdd:COG3096 369 VVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQAL------DVQQTRAIQYQQAVQaLEKARALCGLPDLTPEnAEDY 442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 598 VELKSQEAQGLQEQRDQCLSHLQQYAAAYQQHLTAYEQLTS-----EKEALHKQL--LLQTQLMDQLQHEEVQGkmaaem 670
Cdd:COG3096 443 LAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKiagevERSQAWQTAreLLRRYRSQQALAQRLQQ------ 516
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 671 ARQELQEAQERLkasSQENQQLQAQLSLLVLPGEDMDQEEQDEEVpqpsltipedLVSREAMVAFCNAAIARAEEEQARL 750
Cdd:COG3096 517 LRAQLAELEQRL---RQQQNAERLLEEFCQRIGQQLDAAEELEEL----------LAELEAQLEELEEQAAEAVEQRSEL 583
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 751 RVQLREQKARCRSLAHLAaPV----QSKLEKeavvprdMGDSVSE--ESNQALHVAMEKLQNRFLEVMQEKVELKERVEE 824
Cdd:COG3096 584 RQQLEQLRARIKELAARA-PAwlaaQDALER-------LREQSGEalADSQEVTAAMQQLLEREREATVERDELAARKQA 655
|
..
gi 939108073 825 LE 826
Cdd:COG3096 656 LE 657
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
343-574 |
6.73e-07 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 53.48 E-value: 6.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 343 EMSELLLQQFSSQSEASGSNEQLQQAMEERAQLESHVGQLMESLKQLQVERDQYAENLKGESAmwQQRVQQMAEQVHALK 422
Cdd:COG3206 148 ELAAAVANALAEAYLEQNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLVDL--SEEAKLLLQQLSELE 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 423 EEKEQRESQVQELEASLAELRSQMEEPPPPEPPTGPSEAEERLQGEVEQLQKELEGLTG----------QLRAQVQDNES 492
Cdd:COG3206 226 SQLAEARAELAEAEARLAALRAQLGSGPDALPELLQSPVIQQLRAQLAELEAELAELSArytpnhpdviALRAQIAALRA 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 493 LshLNREQEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISRALSQNRELKEQLAELQNGFVRLTN--ENMEITSAL 570
Cdd:COG3206 306 Q--LQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQrlEEARLAEAL 383
|
....
gi 939108073 571 QSEQ 574
Cdd:COG3206 384 TVGN 387
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
308-658 |
7.67e-07 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 53.42 E-value: 7.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 308 EDLRQQNSELEEKLrvlvaekAAAQLGAEELQKKLEMSELLLQQFSSQSEASGSNEQLQQAMEERAQLESHVGQLMESLK 387
Cdd:PRK04863 789 EQLRAEREELAERY-------ATLSFDVQKLQRLHQAFSRFIGSHLAVAFEADPEAELRQLNRRRVELERALADHESQEQ 861
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 388 QLQVERDQYAENLKGESAM-----------WQQRVQQMAEQVHALKEEK---EQRESQVQELEASLAELRSqmeeppppe 453
Cdd:PRK04863 862 QQRSQLEQAKEGLSALNRLlprlnlladetLADRVEEIREQLDEAEEAKrfvQQHGNALAQLEPIVSVLQS--------- 932
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 454 pptgPSEAEERLQGEVEQLQKELEGLTGQLRAQVQDNESLSHLNREQEGRLLELEREAQhwseqaEERKQILESMQSDRt 533
Cdd:PRK04863 933 ----DPEQFEQLKQDYQQAQQTQRDAKQQAFALTEVVQRRAHFSYEDAAEMLAKNSDLN------EKLRQRLEQAEQER- 1001
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 534 tisralsqnRELKEQLAELQNGFvrltNENMEITSALQSEQHVKKELarkLGELQERLGELkeTVELKSQEAQGLQEQRD 613
Cdd:PRK04863 1002 ---------TRAREQLRQAQAQL----AQYNQVLASLKSSYDAKRQM---LQELKQELQDL--GVPADSGAEERARARRD 1063
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 939108073 614 QClshlqqyaaaYQQHLTAYEQltseKEALHKQLLLQTQLMDQLQ 658
Cdd:PRK04863 1064 EL----------HARLSANRSR----RNQLEKQLTFCEAEMDNLT 1094
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
172-762 |
8.21e-07 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 53.42 E-value: 8.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 172 TNKQLSSTIEELKQQNQ---DTLDQLEkekkdyqQKLAKEQGALREQLQVH--IQTIGILVSEKAELQTALAHTQQAARQ 246
Cdd:PRK04863 436 TADNAEDWLEEFQAKEQeatEELLSLE-------QKLSVAQAAHSQFEQAYqlVRKIAGEVSRSEAWDVARELLRRLREQ 508
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 247 KAgesedLASRLQSSRQRVGELERTLSTVSTQQKQADRYNKDLTKERDAlklelykngksNEDLRQQNSELEEKLRVLVA 326
Cdd:PRK04863 509 RH-----LAEQLQQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDD-----------EDELEQLQEELEARLESLSE 572
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 327 EKAAAQLGAEELQKKLEMSELLLQQFSSQS----EASGSNEQLQ----QAMEERAQLESHVGQLMESLKQLQVERDQYA- 397
Cdd:PRK04863 573 SVSEARERRMALRQQLEQLQARIQRLAARApawlAAQDALARLReqsgEEFEDSQDVTEYMQQLLERERELTVERDELAa 652
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 398 ---------ENLKGESAMWQQRVQQMAEQVHA--LKEEKEQRESQ-VQELEASLAELRSQMEEPPppepptgPSEAEERL 465
Cdd:PRK04863 653 rkqaldeeiERLSQPGGSEDPRLNALAERFGGvlLSEIYDDVSLEdAPYFSALYGPARHAIVVPD-------LSDAAEQL 725
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 466 QGEvEQLQKEL---EGLTGQLR-----AQVQDNESLSHLNREQ-----------------EGRLLELEREAQHWSEQAEE 520
Cdd:PRK04863 726 AGL-EDCPEDLyliEGDPDSFDdsvfsVEELEKAVVVKIADRQwrysrfpevplfgraarEKRIEQLRAEREELAERYAT 804
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 521 RKQILESMQSDRTTISRALSQN-------------RELKEQLAELQNGFVRLTNENMEITSALQSeqhvKKELARKLGEL 587
Cdd:PRK04863 805 LSFDVQKLQRLHQAFSRFIGSHlavafeadpeaelRQLNRRRVELERALADHESQEQQQRSQLEQ----AKEGLSALNRL 880
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 588 QERLGELKEtvELKSQEAQGLQEQRDQCLSHlQQYAAAYQQHLTAYEQLTSekealhkqlLLQTqlmDQLQHEEVQGKMA 667
Cdd:PRK04863 881 LPRLNLLAD--ETLADRVEEIREQLDEAEEA-KRFVQQHGNALAQLEPIVS---------VLQS---DPEQFEQLKQDYQ 945
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 668 AEMARQELQEAQERLKASSQENQQLQAQLSLLVLPGEDMDQEEQdeevpqpsltIPEDLVsreamvafcnaaiaRAEEEQ 747
Cdd:PRK04863 946 QAQQTQRDAKQQAFALTEVVQRRAHFSYEDAAEMLAKNSDLNEK----------LRQRLE--------------QAEQER 1001
|
650
....*....|....*
gi 939108073 748 ARLRVQLREQKARCR 762
Cdd:PRK04863 1002 TRAREQLRQAQAQLA 1016
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
265-687 |
1.24e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 52.46 E-value: 1.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 265 VGELERTLSTVSTQQKQADRYNKDLTKERDALKLELYKNGKSNEDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEM 344
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 345 SELLLQQFSSQSEASGSNEQLQQAMEERAQLESHVGQLMESLKQLQVERDQYAENLKGESAMWQQRVQQMAEQVHALKEE 424
Cdd:COG4717 128 LPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQR 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 425 KEQRESQVQELEASLAELRSQMEEPPPPEPPTGPSEAEERLQG---------EVEQLQKELEGLTGQLRAQVQDNESL-- 493
Cdd:COG4717 208 LAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLllliaaallALLGLGGSLLSLILTIAGVLFLVLGLla 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 494 ---SHLNREQEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISRALSQNRELKEQLAELQNGFVRLTNENMEIT--- 567
Cdd:COG4717 288 llfLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQlee 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 568 -----SALQSEQHV---------------KKELARKLGELQERLGELKETVE--LKSQEAQGLQEQRDQCLSHLQQYAAA 625
Cdd:COG4717 368 leqeiAALLAEAGVedeeelraaleqaeeYQELKEELEELEEQLEELLGELEelLEALDEEELEEELEELEEELEELEEE 447
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 939108073 626 YQQHLTAYEQLTSEKEALHK-----QLLLQTQLMDQLQHEEVQGKMAAEMARQELQEAQERLKASSQ 687
Cdd:COG4717 448 LEELREELAELEAELEQLEEdgelaELLQELEELKAELRELAEEWAALKLALELLEEAREEYREERL 514
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
310-682 |
1.35e-06 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 52.65 E-value: 1.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 310 LRQQNSELEEKLRVLVAEKA---AAQLGAEELQKKLEMSELLLQQfssqSEASGSNEQLQQAMEERAQLeshvgqLMESL 386
Cdd:COG3096 274 MRHANERRELSERALELRRElfgARRQLAEEQYRLVEMARELEEL----SARESDLEQDYQAASDHLNL------VQTAL 343
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 387 KQlQVERDQYAENLkgESAmwQQRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQM-------------------- 446
Cdd:COG3096 344 RQ-QEKIERYQEDL--EEL--TERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLadyqqaldvqqtraiqyqqa 418
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 447 --EEPPPPEPPTGPSEAEERLQGEVEQLQKELEGLTGQLRAQVQdNESLSHLNREQEGRLLEL--------EREAQHwse 516
Cdd:COG3096 419 vqALEKARALCGLPDLTPENAEDYLAAFRAKEQQATEEVLELEQ-KLSVADAARRQFEKAYELvckiagevERSQAW--- 494
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 517 qaEERKQILESMQSDRTTISRALSQNRELKE--QLAELQNGFVRLTNE-NMEITSALQSEQhvkkELARKLGELQERLGE 593
Cdd:COG3096 495 --QTARELLRRYRSQQALAQRLQQLRAQLAEleQRLRQQQNAERLLEEfCQRIGQQLDAAE----ELEELLAELEAQLEE 568
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 594 LKETVELKSQEAQGLQEQRDQCLSHLQQYAAAYQQHLTAYEQLTSEKEALHKQLLLQTQLMDQLQHeEVQGKMAAEMARQ 673
Cdd:COG3096 569 LEEQAAEAVEQRSELRQQLEQLRARIKELAARAPAWLAAQDALERLREQSGEALADSQEVTAAMQQ-LLEREREATVERD 647
|
....*....
gi 939108073 674 ELQEAQERL 682
Cdd:COG3096 648 ELAARKQAL 656
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
287-688 |
1.45e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 52.08 E-value: 1.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 287 KDLTKERDALkleLYKNGKSNEDLRQQNSELEEKLRVL---VAEKAAAQLGAEELQKKLEMSELLLQQFSSQSEASGSNE 363
Cdd:COG4717 49 ERLEKEADEL---FKPQGRKPELNLKELKELEEELKEAeekEEEYAELQEELEELEEELEELEAELEELREELEKLEKLL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 364 QLQQAMEERAQLESHVGQLMESLKQLQVERDQYAENLKGESAMWQQRVQQMAEQVHALKEEKEQRESQVQELEASLAELR 443
Cdd:COG4717 126 QLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQ 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 444 SQMEEPPppepptgpsEAEERLQGEVEQLQKELEGLTGQLRAQvQDNESLSHLNREQ--EGRLLELEREAQHWSEQAEER 521
Cdd:COG4717 206 QRLAELE---------EELEEAQEELEELEEELEQLENELEAA-ALEERLKEARLLLliAAALLALLGLGGSLLSLILTI 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 522 KQILESMQSDRTTISRALSQNRELKEQLAELQNGFVRLTNENMEITSALQSEQHVKKEL-----------ARKLGELQER 590
Cdd:COG4717 276 AGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLspeellelldrIEELQELLRE 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 591 LGELKETVELKSQEAQGLQEQRDQCLSHLQQYAAAYQQHlTAYEQLTSEKEALHKQLLLQTQLMDQLQHEEVQGKMAAEM 670
Cdd:COG4717 356 AEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQA-EEYQELKEELEELEEQLEELLGELEELLEALDEEELEEEL 434
|
410 420
....*....|....*....|
gi 939108073 671 A--RQELQEAQERLKASSQE 688
Cdd:COG4717 435 EelEEELEELEEELEELREE 454
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
122-536 |
1.49e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 52.35 E-value: 1.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 122 ESLRQLSQQLNGLVSESTSYINGEGLTSSNMK-------ELESRYQELAVALDSSYVTNKQLSSTIEELKQqNQDTLDQL 194
Cdd:PRK02224 279 EEVRDLRERLEELEEERDDLLAEAGLDDADAEavearreELEDRDEELRDRLEECRVAAQAHNEEAESLRE-DADDLEER 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 195 EKEKKDYQQKLAKEQGALREQLQVHIQTIGILVSEKAELQTALAHTQQAARQKAGESEDLASRLQSSRQRVGELERTLST 274
Cdd:PRK02224 358 AEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRT 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 275 VSTQQKQADRY---------NKDLTKERDALKLELYKNGKSN-----EDLRQQNSELEEKLRVLVAEKAAAQlGAEELQK 340
Cdd:PRK02224 438 ARERVEEAEALleagkcpecGQPVEGSPHVETIEEDRERVEEleaelEDLEEEVEEVEERLERAEDLVEAED-RIERLEE 516
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 341 KLEMSELLLQQFSS-------------------QSEASGSNEQLQQAMEERAQLESHVGQLMESLKQLQVERDQYA--EN 399
Cdd:PRK02224 517 RREDLEELIAERREtieekreraeelreraaelEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLEriRT 596
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 400 LKGESAMWQQRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQMEEppppepptgpsEAEERLQGEVEQLQKELEGL 479
Cdd:PRK02224 597 LLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDE-----------ARIEEAREDKERAEEYLEQV 665
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 939108073 480 TGQLRAQVQDNESLSHLNREQEGRLLELErEAQHWSEQAEERKQILESMQSDRTTIS 536
Cdd:PRK02224 666 EEKLDELREERDDLQAEIGAVENELEELE-ELRERREALENRVEALEALYDEAEELE 721
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
231-482 |
1.78e-06 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 51.95 E-value: 1.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 231 AELQTALAHTQQAARQKAGESEDLASRLQSSRQRVGElertlSTVSTQQKQADRYNK-DLTKERDALKLELYKNGKSNED 309
Cdd:pfam05667 254 EQLRSAALAGTEATSGASRSAQDLAELLSSFSGSSTT-----DTGLTKGSRFTHTEKlQFTNEAPAATSSPPTKVETEEE 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 310 LRQQNSELEEKLRVLVAEkaaAQLGAEELQKKLEMSELLLQQFSSQSEA-SGSNEQLQQAMEERAQLESHVGQLMESLKQ 388
Cdd:pfam05667 329 LQQQREEELEELQEQLED---LESSIQELEKEIKKLESSIKQVEEELEElKEQNEELEKQYKVKKKTLDLLPDAEENIAK 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 389 LQVERDQYAENLKGESAMWQQRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQMEEppppepptgpSEAEERLQGE 468
Cdd:pfam05667 406 LQALVDASAQRLVELAGQWEKHRVPLIEEYRALKEAKSNKEDESQRKLEEIKELREKIKE----------VAEEAKQKEE 475
|
250
....*....|....*
gi 939108073 469 V-EQLQKELEGLTGQ 482
Cdd:pfam05667 476 LyKQLVAEYERLPKD 490
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
150-760 |
2.40e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.61 E-value: 2.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 150 SNMKELESRYQELAVALDSSYVTNKQLSSTIEEL---KQQNQDTLDQLEKEKKDYQQKL---AKEQGALREQLQVHIQTI 223
Cdd:TIGR02169 315 RELEDAEERLAKLEAEIDKLLAEIEELEREIEEErkrRDKLTEEYAELKEELEDLRAELeevDKEFAETRDELKDYREKL 394
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 224 GILVSEKAELQTALAHTQQAARQKAGESEDLASRLQSSRQRVGELERTLSTVSTQQKQADRYNKDLTKERDALKLELYkn 303
Cdd:TIGR02169 395 EKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELY-- 472
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 304 gKSNEDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEMSELLLQQ----FSSQSEASGSNEQLQQAMEERA------ 373
Cdd:TIGR02169 473 -DLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASiqgvHGTVAQLGSVGERYATAIEVAAgnrlnn 551
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 374 ---QLESHVGQLMESLKQLQVER------------------------DQYAENL-----KGESAMWQqrVQQMAEQVHAL 421
Cdd:TIGR02169 552 vvvEDDAVAKEAIELLKRRKAGRatflplnkmrderrdlsilsedgvIGFAVDLvefdpKYEPAFKY--VFGDTLVVEDI 629
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 422 KEEKEQR-ESQVQELEASLAELRSQM-----EEPPPPEPPTGPSEAEERLQGEVEQLQKELEGLTGQLRAQVQDNESLSH 495
Cdd:TIGR02169 630 EAARRLMgKYRMVTLEGELFEKSGAMtggsrAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQ 709
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 496 LNREQEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISRALSQNRELKEQLA------ELQNGFVRLTNENME---- 565
Cdd:TIGR02169 710 ELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEarieelEEDLHKLEEALNDLEarls 789
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 566 ------ITSALQSEQHVKKELARKLGELQERLGELKETVELKSQEAQGLQEQRDQC----------LSHLQQYAAAYQQH 629
Cdd:TIGR02169 790 hsripeIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLkeqiksiekeIENLNGKKEELEEE 869
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 630 LTAYE----QLTSEKEALHKQLLLQTQLMDQLQHEEVQGKMAAEMARQELQEAQERLKASSQENQQ-LQAQLSLLVLPGE 704
Cdd:TIGR02169 870 LEELEaalrDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEiEDPKGEDEEIPEE 949
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*.
gi 939108073 705 DMDQEEQDEEVpqpsLTIPEDLvsrEAMVAFCNAAIARAEEEQARLRvQLREQKAR 760
Cdd:TIGR02169 950 ELSLEDVQAEL----QRVEEEI---RALEPVNMLAIQEYEEVLKRLD-ELKEKRAK 997
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
233-603 |
3.18e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 51.50 E-value: 3.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 233 LQTALAHTQQAARQKAgESEDLASRLQSSRQRVGELERTLSTVSTQQKQA-DRYNKDLTKERDALKLELYKngksnEDLR 311
Cdd:PRK04863 285 LEEALELRRELYTSRR-QLAAEQYRLVEMARELAELNEAESDLEQDYQAAsDHLNLVQTALRQQEKIERYQ-----ADLE 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 312 QQNSELEEKLRVLvaekAAAQLGAEELQKKLEMSELllqqfsSQSEASGSNEQLQQAMEE---RAQLESHVGQLMESLKQ 388
Cdd:PRK04863 359 ELEERLEEQNEVV----EEADEQQEENEARAEAAEE------EVDELKSQLADYQQALDVqqtRAIQYQQAVQALERAKQ 428
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 389 LQVERDQYAENLKGESAMWQQRVQQMAEQVHALKE--------------------------EKEQRESQVQELEASLAEL 442
Cdd:PRK04863 429 LCGLPDLTADNAEDWLEEFQAKEQEATEELLSLEQklsvaqaahsqfeqayqlvrkiagevSRSEAWDVARELLRRLREQ 508
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 443 RSQMEEPPPPEPPTGPSEAEERLQGEVEQLQKELEGltgQLRAQVQDNESLSHLNREQEGRLLELEREAQHWSEQAEERK 522
Cdd:PRK04863 509 RHLAEQLQQLRMRLSELEQRLRQQQRAERLLAEFCK---RLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMALR 585
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 523 QILESMQSDRTTISRALSQNRELKEQLAELQNGFVRLTNENMEITSALQSEQHVKKELARKLGELQERLGELKETVELKS 602
Cdd:PRK04863 586 QQLEQLQARIQRLAARAPAWLAAQDALARLREQSGEEFEDSQDVTEYMQQLLERERELTVERDELAARKQALDEEIERLS 665
|
.
gi 939108073 603 Q 603
Cdd:PRK04863 666 Q 666
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
228-477 |
3.45e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.53 E-value: 3.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 228 SEKAELQTALAHTQQAARQKAGESEDLASRLQSSRQRVGELERTLSTVSTQQKQADRYNKDLTKERDALKlelykngksn 307
Cdd:COG4942 27 AELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR---------- 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 308 edlrqqnSELEEKLRVLvaekaAAQLGAEELQKKLEMSELLLQQfSSQSEASGSNEQLQQAMEERAqleshvgQLMESLK 387
Cdd:COG4942 97 -------AELEAQKEEL-----AELLRALYRLGRQPPLALLLSP-EDFLDAVRRLQYLKYLAPARR-------EQAEELR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 388 QLQVERDQYAENLKGESAMWQQRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQMEEPPppepptgpsEAEERLQG 467
Cdd:COG4942 157 ADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQ---------QEAEELEA 227
|
250
....*....|
gi 939108073 468 EVEQLQKELE 477
Cdd:COG4942 228 LIARLEAEAA 237
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
181-534 |
4.15e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 51.30 E-value: 4.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 181 EELKQQNQDTLDQLEKEKKDYQQKLAKEQGALREQLQVhiqtigilvSEKAELQTALAHTQQAARQKAGESEDLASRLQS 260
Cdd:PTZ00121 1434 DEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKK---------ADEAKKKAEEAKKADEAKKKAEEAKKKADEAKK 1504
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 261 SRQRVGELERTLSTVSTQQKQADRYNKDLTKERDALKLELYKNG---KSNEDLR--QQNSELEEKLRVlvAEKAAAQLGA 335
Cdd:PTZ00121 1505 AAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKAdelKKAEELKkaEEKKKAEEAKKA--EEDKNMALRK 1582
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 336 EELQKKLEMSELLLQQFSSQSEASGSNEQLQQAMEERAQLES-----HVGQLMESLKQLQVERDQYAENLKGESAMWQQR 410
Cdd:PTZ00121 1583 AEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEElkkaeEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIK 1662
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 411 VQQM----------AEQVHALKEEKEQRESQV--QELEASLAELRSQMEEPPPPEPPTGPSEAEERlQGEVEQLQKELE- 477
Cdd:PTZ00121 1663 AAEEakkaeedkkkAEEAKKAEEDEKKAAEALkkEAEEAKKAEELKKKEAEEKKKAEELKKAEEEN-KIKAEEAKKEAEe 1741
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 939108073 478 --GLTGQLRAQVQDNESLSHLNREQEGRLLELEREAQHWSEQAEERKQILESMQSDRTT 534
Cdd:PTZ00121 1742 dkKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKI 1800
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
149-479 |
5.61e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 50.44 E-value: 5.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 149 SSNMKELESRYQELAVALDSSYVTNKQLSSTIEELKQQNQDTLDQLEKEKKDYqQKLAKEQGALREQLQVHIQTIGILVS 228
Cdd:TIGR02168 753 SKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREAL-DELRAELTLLNEEAANLRERLESLER 831
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 229 EKAELQTALAHTQQAARQKAGESEDLASRLQSSRQRVGELERTLSTVSTQQKQADRynkdltkERDALKLELYKNGKSNE 308
Cdd:TIGR02168 832 RIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEE-------ALALLRSELEELSEELR 904
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 309 DLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEMselLLQQFSSQSEASgsneqLQQAMEERAQLESHVGQLMESLKQ 388
Cdd:TIGR02168 905 ELESKRSELRRELEELREKLAQLELRLEGLEVRIDN---LQERLSEEYSLT-----LEEAEALENKIEDDEEEARRRLKR 976
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 389 LQVERDQYAE-NLkgeSAMwqqrvqqmaEQVHALKEEKEQRESQVQELEASLAELRSQMEEPPPpepptgpsEAEERLQG 467
Cdd:TIGR02168 977 LENKIKELGPvNL---AAI---------EEYEELKERYDFLTAQKEDLTEAKETLEEAIEEIDR--------EARERFKD 1036
|
330
....*....|..
gi 939108073 468 EVEQLQKELEGL 479
Cdd:TIGR02168 1037 TFDQVNENFQRV 1048
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
148-599 |
7.62e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 50.06 E-value: 7.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 148 TSSNMKELESRYQELAVALDSSYVTNKQLSS------TIEELKQQNQDTLDQLEKEKKDYQQKLAK------------EQ 209
Cdd:PRK03918 219 LREELEKLEKEVKELEELKEEIEELEKELESlegskrKLEEKIRELEERIEELKKEIEELEEKVKElkelkekaeeyiKL 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 210 GALREQLQVHIQTIGILVSEKAELQTALAHTQQAARQKAGESEDLASRLQSSRQRVGELE---RTLSTVSTQQKQADRYN 286
Cdd:PRK03918 299 SEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEerhELYEEAKAKKEELERLK 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 287 KDLT-KERDALKLELYKNGKSNEDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEMSELLLQQFSSQSEAsgsnEQL 365
Cdd:PRK03918 379 KRLTgLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRK----ELL 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 366 QQAMEERAQLESHVGQLMESLKQLQVERDQYAENLKGESAMWQQRvqQMAEQVHALK--------EEKEQRESQVQELEA 437
Cdd:PRK03918 455 EEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLK--ELAEQLKELEeklkkynlEELEKKAEEYEKLKE 532
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 438 SLAELRSQMEEPPPPEPPTGPSEAEER-LQGEVEQLQKELEGLTGQLRAQ-VQDNESLSHLNREQE---GRLLELEREAQ 512
Cdd:PRK03918 533 KLIKLKGEIKSLKKELEKLEELKKKLAeLEKKLDELEEELAELLKELEELgFESVEELEERLKELEpfyNEYLELKDAEK 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 513 HWSEQAEERKQILESMQSDRTTISRALSQNRELKEQLAELQNGFV-----RLTNENMEITSALQSEQHVKKELARKLGEL 587
Cdd:PRK03918 613 ELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSeeeyeELREEYLELSRELAGLRAELEELEKRREEI 692
|
490
....*....|..
gi 939108073 588 QERLGELKETVE 599
Cdd:PRK03918 693 KKTLEKLKEELE 704
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
263-603 |
8.24e-06 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 49.74 E-value: 8.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 263 QRVGELERTLSTVSTQQKQAD-RYNKDLTKERDALK--LELYKNGKSNEDlRQQNSELEEKLRVLVAEKAAAQLGAEELQ 339
Cdd:pfam17380 237 ERRKESFNLAEDVTTMTPEYTvRYNGQTMTENEFLNqlLHIVQHQKAVSE-RQQQEKFEKMEQERLRQEKEEKAREVERR 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 340 KKLEMSELLlQQFSSQSEASGSNEQLQQAMEERAQLE----SHVGQLMESLKQ----LQVERDQYAENLKGESAMWQQRV 411
Cdd:pfam17380 316 RKLEEAEKA-RQAEMDRQAAIYAEQERMAMERERELErirqEERKRELERIRQeeiaMEISRMRELERLQMERQQKNERV 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 412 QQMAEQVHALKEEKEQRESQVQELEASLAELRSQMEEPPppepptgpseaEERLQGEVEQLQKELEGLTGQLRAQVQDNE 491
Cdd:pfam17380 395 RQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEAR-----------QREVRRLEEERAREMERVRLEEQERQQQVE 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 492 SLSHLNREQEGRLLELEREAQHWSEQAEERKQILE-SMQSDRTTISRALSQNRELKEQLAELQNGFV----RLTNENMEI 566
Cdd:pfam17380 464 RLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEkELEERKQAMIEEERKRKLLEKEMEERQKAIYeeerRREAEEERR 543
|
330 340 350
....*....|....*....|....*....|....*..
gi 939108073 567 TSALQSEQHVKKELARKLGELQERLGELKETVELKSQ 603
Cdd:pfam17380 544 KQQEMEERRRIQEQMRKATEERSRLEAMEREREMMRQ 580
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
259-484 |
8.71e-06 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 49.63 E-value: 8.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 259 QSSRQRVGELERTLSTVstqQKQADRYNKDLtkERDALKLELYKNGKSNEDLRQQNSELEEKLRVLVAEKAAAQLGAEEL 338
Cdd:COG3206 164 QNLELRREEARKALEFL---EEQLPELRKEL--EEAEAALEEFRQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 339 QKKLEMSELLLQQFSSQSEASGSNEQLQQAMEERAQLEShvgqlmeslkQLQVERDQYAENlkgesamwQQRVQQMAEQV 418
Cdd:COG3206 239 EARLAALRAQLGSGPDALPELLQSPVIQQLRAQLAELEA----------ELAELSARYTPN--------HPDVIALRAQI 300
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 939108073 419 HALKEEKEQR--------ESQVQELEASLAELRSQMEEPPPPEPPTGPSEAE-ERLQGEVEQLQKELEGLTGQLR 484
Cdd:COG3206 301 AALRAQLQQEaqrilaslEAELEALQAREASLQAQLAQLEARLAELPELEAElRRLEREVEVARELYESLLQRLE 375
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
230-691 |
9.77e-06 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 49.91 E-value: 9.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 230 KAELQTALahtQQAARQKAGESEDLASrlqssrqrVGELERTLSTVstqqKQADRYNKDLtkerDALKLELyknGKSNED 309
Cdd:PRK11281 38 EADVQAQL---DALNKQKLLEAEDKLV--------QQDLEQTLALL----DKIDRQKEET----EQLKQQL---AQAPAK 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 310 LRQQNSELE--EKLRVLVAEKAAAQLGAEELQKKLEmsELLLQQFSSQSEASGSNEQL--QQAMEERAQleshvGQLMES 385
Cdd:PRK11281 96 LRQAQAELEalKDDNDEETRETLSTLSLRQLESRLA--QTLDQLQNAQNDLAEYNSQLvsLQTQPERAQ-----AALYAN 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 386 lkqlqverdqyaenlkgesamwQQRVQQMAEQVHALKEEKEQ-RESQVQELEASLAELRSQMEEPPPPEpptgpsEAEER 464
Cdd:PRK11281 169 ----------------------SQRLQQIRNLLKGGKVGGKAlRPSQRVLLQAEQALLNAQNDLQRKSL------EGNTQ 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 465 LQgEVEQLQKELEGL-TGQLRAQVQDNESLshLNREqegRLLELEREAQhwseQAEERKQILESMQSDrtTISRALSQNR 543
Cdd:PRK11281 221 LQ-DLLQKQRDYLTArIQRLEHQLQLLQEA--INSK---RLTLSEKTVQ----EAQSQDEAARIQANP--LVAQELEINL 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 544 ELKEQLAELQNGFVRLTNENMEIT----SALQSEQHVKKE---------LARKLGELQERLGELKETVELKSQEAQ---- 606
Cdd:PRK11281 289 QLSQRLLKATEKLNTLTQQNLRVKnwldRLTQSERNIKEQisvlkgsllLSRILYQQQQALPSADLIEGLADRIADlrle 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 607 --GLQEQRDQcLSHLQQYAAAYQQHltayeQLTSEKEALHKQLLlqtQLMDqlqheevqgkmaaemARQELQEaqerlka 684
Cdd:PRK11281 369 qfEINQQRDA-LFQPDAYIDKLEAG-----HKSEVTDEVRDALL---QLLD---------------ERRELLD------- 417
|
....*..
gi 939108073 685 ssQENQQ 691
Cdd:PRK11281 418 --QLNKQ 422
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
153-898 |
1.29e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 49.20 E-value: 1.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 153 KELESRYQELAVALDSSyvtnKQLSSTIEELKQQNQDTLDQLEKEKKDYQQKlAKEQGALREQLQVHIqtigilvsekae 232
Cdd:pfam02463 169 RKKKEALKKLIEETENL----AELIIDLEELKLQELKLKEQAKKALEYYQLK-EKLELEEEYLLYLDY------------ 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 233 lqtaLAHTQQAARQKAGESEDLASRLQSSRQRVGELERTLSTVSTQQKQADRYNKDLTKERDALKLELYKNGKSNEDLRQ 312
Cdd:pfam02463 232 ----LKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLER 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 313 QNSELEEKLRVLVAEKAAAQlgaEELQKKLEMSELLLQQFSSQSEASGSNEQLQQAMEERAQLESHVGQLMESLKQLQVE 392
Cdd:pfam02463 308 RKVDDEEKLKESEKEKKKAE---KELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESE 384
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 393 RDQYAENLKgesamwqqrvqqmaEQVHALKEEKEQResqvQELEASLAELRSQMEEPPPPEPPTGPSEAEERLQGEVEQL 472
Cdd:pfam02463 385 RLSSAAKLK--------------EEELELKSEEEKE----AQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKL 446
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 473 QKELEGLTGQLRAQVQDNESLShlnrEQEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISRALSQNRELKEQLAEL 552
Cdd:pfam02463 447 TEEKEELEKQELKLLKDELELK----KSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGG 522
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 553 QNGFVRLTNENMEITSALQSEQHVKKE------LARKLGELQERLGELKETVELKSQEAQGLQEQRDQCLSHLQQYAAAY 626
Cdd:pfam02463 523 RIISAHGRLGDLGVAVENYKVAISTAVivevsaTADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPI 602
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 627 QQHLTAYEQLTSEKEALHKQLLLQTQLMDQLQHEEVQGKMAAEMARQELQEAQERLKASSQENQQlqaqlsllvlpGEDM 706
Cdd:pfam02463 603 LNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKAS-----------LSEL 671
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 707 DQEEQDEEVPQPSLTIPEDLVSREAMVAFCNAAIARAEEEQARLRVQLREQKARCRSLAHLAAPVQSKLEKEAVvprdmg 786
Cdd:pfam02463 672 TKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKI------ 745
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 787 DSVSEESNQALHVAMEKLQNRFLEVMQEKVELKERVEELEHCCIQLSGETDTIGE-----------YIALYQNQRAVLKA 855
Cdd:pfam02463 746 DEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEeelraleeelkEEAELLEEEQLLIE 825
|
730 740 750 760
....*....|....*....|....*....|....*....|....
gi 939108073 856 RHL-EKEEYISRLAQDKEEMKVKLLELQELVLRLVNERNEWQGK 898
Cdd:pfam02463 826 QEEkIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELL 869
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
214-757 |
1.33e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 49.20 E-value: 1.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 214 EQLQVHIQTIGILVSEKAELQTALAHTQQAARQKAGESEDLASRLQSSRQrVGELERTLSTVSTQQKQADRYNKDLTKER 293
Cdd:TIGR00618 212 CMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQL-LKQLRARIEELRAQEAVLEETQERINRAR 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 294 DALKLELYKNG--KSNEDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEMSELLLQQFSSQSEASGSNEQLQQAMEE 371
Cdd:TIGR00618 291 KAAPLAAHIKAvtQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREI 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 372 RAQLEShvgqLMESLKQLQVERDQYAENLKGESAMWQQRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQMEEPPP 451
Cdd:TIGR00618 371 SCQQHT----LTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAA 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 452 PEPPTGPSEAEERLQGEVEQLQKELEGLTGQLRAQVQDNESLSHLNREQEGRLLELEREAQHWSEQAEERKQILESMQSD 531
Cdd:TIGR00618 447 ITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPL 526
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 532 RTTISRALSQNRELKEQLAELQNGFVRLTNENMEITSALQSEQHVKKELARKLGELQERLGELKETVELKSQEAQGLQEQ 611
Cdd:TIGR00618 527 TRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEA 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 612 RDQ--CLSHLQQYAAAYQQH---LTAYEQLTSEKEALHKQLLLQTQLmdQLQHEEVQGKMAAEMARQELQEAQERLKASS 686
Cdd:TIGR00618 607 EDMlaCEQHALLRKLQPEQDlqdVRLHLQQCSQELALKLTALHALQL--TLTQERVREHALSIRVLPKELLASRQLALQK 684
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 939108073 687 QENQQLQAQLSLLVLPGEDMDQEEQDEEVPQPSLTIPEDLVSREAMVAFCNAAIARAEEEQARLRVQLREQ 757
Cdd:TIGR00618 685 MQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTV 755
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
111-604 |
1.39e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 49.35 E-value: 1.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 111 LMEETKTFSSTESLRQLSQqLNGLVSESTSYI-NGEGLTSSNMKELESRYQELAVALDSSYVTNKQLSSTIEELKQQNQD 189
Cdd:pfam15921 303 IIQEQARNQNSMYMRQLSD-LESTVSQLRSELrEAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQK 381
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 190 TLDQLEKEKKDYQqkLAKEQGA-LREQLQVHIQTIGILVSEKAELQTALAHTQQAARQKAGESEDLASRLQSSRQRVGEL 268
Cdd:pfam15921 382 LLADLHKREKELS--LEKEQNKrLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNES 459
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 269 ERTLSTVSTQQKQADRYNKDLTKERDALKLELYKNGKSNEDLrqqNSELEEKLRVLVAEKAAAQLGAEELQKKLEMSELL 348
Cdd:pfam15921 460 LEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDL---TASLQEKERAIEATNAEITKLRSRVDLKLQELQHL 536
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 349 LQQFSSQSEASGSNEQLQQAMEERAQLESHVGQLMESLKQLQVERDQYAENLKGESAMWQQRVQQMAEQVHALKEEKEQR 428
Cdd:pfam15921 537 KNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKK 616
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 429 ESQVQELEASLAELrsQMEEPPPPEPPTGPSEAEERLQGEVEQLQKELEGLTGQLRAQVQDNESLSHLNR----EQEGRL 504
Cdd:pfam15921 617 DAKIRELEARVSDL--ELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRnkseEMETTT 694
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 505 LELEREAQHWSEQAEERKQILESMQ-SDRTTISRALSQNREL---KEQLAELQNGFVRL----TNENMEITSALQSEQHV 576
Cdd:pfam15921 695 NKLKMQLKSAQSELEQTRNTLKSMEgSDGHAMKVAMGMQKQItakRGQIDALQSKIQFLeeamTNANKEKHFLKEEKNKL 774
|
490 500
....*....|....*....|....*...
gi 939108073 577 KKELARKLGELQERLGELKetvELKSQE 604
Cdd:pfam15921 775 SQELSTVATEKNKMAGELE---VLRSQE 799
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
191-651 |
1.45e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.00 E-value: 1.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 191 LDQLEKEKKDYQQKLAKEQGALREQLQVHIQTIGILVSEKAELQTALAHTQQAARQKagesEDLASRLQSSRQRVGELER 270
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEEL----EELEAELEELREELEKLEK 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 271 TLStvstqqkqadryNKDLTKERDALKLELYKNGKSNEDLRQQNSELEEKLRVL-VAEKAAAQLGAEELQKKLEMSELLL 349
Cdd:COG4717 124 LLQ------------LLPLYQELEALEAELAELPERLEELEERLEELRELEEELeELEAELAELQEELEELLEQLSLATE 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 350 QQFSSQSEASGS-NEQLQQAMEERAQLESHVGQLMESLKQLQVERDQYAENLKGESAMWQQRVQQMAEQVHALKEEKEQR 428
Cdd:COG4717 192 EELQDLAEELEElQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSL 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 429 ESQVQELEASLAEL---------RSQMEEPPPPEPPTGPSEAEERLQGEVEQLQKELEGLTGQLRAQVQDNESLSHLNRE 499
Cdd:COG4717 272 ILTIAGVLFLVLGLlallflllaREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQE 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 500 QEGRLLELEREAQhWSEQAEERKQILESMQ-SDRTTISRALSQNRELKEQLAELQNGFVRLTNENMEITSALqsEQHVKK 578
Cdd:COG4717 352 LLREAEELEEELQ-LEELEQEIAALLAEAGvEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELL--EALDEE 428
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 939108073 579 ELARKLGELQERLGELKETVELKSQEAQGLQEQRDQcLSHLQQYAAAYQQHLTAYEQLTS-EKEALHKQLLLQT 651
Cdd:COG4717 429 ELEEELEELEEELEELEEELEELREELAELEAELEQ-LEEDGELAELLQELEELKAELRElAEEWAALKLALEL 501
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
108-667 |
1.55e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 49.20 E-value: 1.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 108 CSNLMEETKTFSSTESLRQLSQQLNGLVSESTSYINGEGLTSSNMKELESRYQELAVALDSSYVTNKQLSSTIEELKQQN 187
Cdd:TIGR00618 269 IEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQ 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 188 QDTLDQLEKEKKDYQQKLAKEQGALREQLQVHIQTIGILVSEKAELQTALAHTQQAARQKAGESEdlaSRLQSSRQRVGE 267
Cdd:TIGR00618 349 TLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATID---TRTSAFRDLQGQ 425
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 268 LERTLSTVSTQQKQADRYNKDLTKERDALKLELYKNGKSNEDLRQQNSELEEKLRVLVAEKAAAQLGA------EELQKK 341
Cdd:TIGR00618 426 LAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLarllelQEEPCP 505
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 342 LEMSELLLQQFSSQSEASGSNEQLQQAMEERAQ-----LESHVGQLMESLKQLQVERDQYAENLKGESAMWQQRVQQMAE 416
Cdd:TIGR00618 506 LCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAqletsEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKED 585
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 417 QVHALKEEKEQRESQVQELEASLAELRSQMEEPPPPEPPTGPSEAEERLQGEVEQLQKELEGLTGQLRAQVQDNESLSHL 496
Cdd:TIGR00618 586 IPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHAL 665
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 497 NREQEGRLLELEREAQHWSEQAEerkqiLESMQSDRTTISRALSQNRELKEQLAELQNGFVRLTNENMEITSALQSEQHV 576
Cdd:TIGR00618 666 SIRVLPKELLASRQLALQKMQSE-----KEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDA 740
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 577 KKELARKLGELQERLGELKETVELKSQEAQGLQEQRDQCLSHLQQYAAAYQQHLTAYEQLTSEKEALHKQLLLQTQLMDQ 656
Cdd:TIGR00618 741 LNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILN 820
|
570
....*....|.
gi 939108073 657 LQHEEVQGKMA 667
Cdd:TIGR00618 821 LQCETLVQEEE 831
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
459-686 |
1.81e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.22 E-value: 1.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 459 SEAEERLQGEVEQLQKELEGLTGQLRAQVQDNESLSHLNREQEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISRA 538
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 539 LSQNRE-LKEQLAELQ-NGFVRLTNENMEITSALQSE------QHVKKELARKLGELQERLGELKETVELKSQEAQGLQE 610
Cdd:COG4942 99 LEAQKEeLAELLRALYrLGRQPPLALLLSPEDFLDAVrrlqylKYLAPARREQAEELRADLAELAALRAELEAERAELEA 178
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 939108073 611 QRDQCLSHLQQYAAAYQQHLTAYEQLTSEKEALHKQLllqtqlmDQLQHEEVQGKMAAEMARQELQEAQERLKASS 686
Cdd:COG4942 179 LLAELEEERAALEALKAERQKLLARLEKELAELAAEL-------AELQQEAEELEALIARLEAEAAAAAERTPAAG 247
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
358-552 |
2.54e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 2.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 358 ASGSNEQLQQAMEERAQLESHVGQLMESLKQLQVERDQYAENLK---GESAMWQQRVQQMAEQVHALKEEKEQRESQVQE 434
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAaleRRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 435 LEASLAELRSQMEEPPPPEPPTG-------------PSEAEER---LQGEVEQLQKELEGLTGQLRAQVQDNESLSHLNR 498
Cdd:COG4942 95 LRAELEAQKEELAELLRALYRLGrqpplalllspedFLDAVRRlqyLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 939108073 499 EQEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISRALSQNRELKEQLAEL 552
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEAL 228
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
152-515 |
2.93e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.84 E-value: 2.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 152 MKELESRYQELAVALDSSYVTNKQLSSTIEELKQQNQdtldQLEKEKKDYQQKLAKEQGALREQLQVHIQTIGILVSEKA 231
Cdd:COG4717 134 LEALEAELAELPERLEELEERLEELRELEEELEELEA----ELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLA 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 232 ELQTALAHTQQAARQKAGESEDLASRLQSS--RQRVGELERTL---STVSTQQKQADRYNKDLTKERDALKLELYKNGKS 306
Cdd:COG4717 210 ELEEELEEAQEELEELEEELEQLENELEAAalEERLKEARLLLliaAALLALLGLGGSLLSLILTIAGVLFLVLGLLALL 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 307 NEDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLemSELLLQQFSSQSEASGSNEQLQQAMEERAQLESHVGQLmeSL 386
Cdd:COG4717 290 FLLLAREKASLGKEAEELQALPALEELEEEELEELL--AALGLPPDLSPEELLELLDRIEELQELLREAEELEEEL--QL 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 387 KQLQVERDQYAENLKGES-AMWQQRVQQmAEQVHALKEEKEQRESQVQELEASLAELRSQMEEPPPPEPPTGPSEAEERL 465
Cdd:COG4717 366 EELEQEIAALLAEAGVEDeEELRAALEQ-AEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEEL 444
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 939108073 466 QGEVEQLQKELEGLTGQLRaQVQDNESLSHLNREQEGRLLELEREAQHWS 515
Cdd:COG4717 445 EEELEELREELAELEAELE-QLEEDGELAELLQELEELKAELRELAEEWA 493
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
408-614 |
2.95e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.45 E-value: 2.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 408 QQRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQMEEPPPPEPPTgpSEAEERLQGEVEQLQKELEGLTGQLRAQV 487
Cdd:COG4942 33 QQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAAL--EAELAELEKEIAELRAELEAQKEELAELL 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 488 QDNESLSHLNREQE----GRLLELEREAQHWSEQAEERKQILEsmqsdrttisralsqnrELKEQLAELQNGFVRLTNEN 563
Cdd:COG4942 111 RALYRLGRQPPLALllspEDFLDAVRRLQYLKYLAPARREQAE-----------------ELRADLAELAALRAELEAER 173
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 939108073 564 MEITSALQSEQHVKKELARKLGELQERLGELKETVELKSQEAQGLQEQRDQ 614
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEE 224
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
181-399 |
3.73e-05 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 48.03 E-value: 3.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 181 EELKQQNQDTLDQLEKEKKDYQQKLAKEQ------------------------------GALREQLQVHIQTIG-ILVSE 229
Cdd:PRK04863 382 EARAEAAEEEVDELKSQLADYQQALDVQQtraiqyqqavqalerakqlcglpdltadnaEDWLEEFQAKEQEATeELLSL 461
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 230 KAELQTALAHTQQ----------------------AARQKAGESED---LASRLQSSRQRVGELERTLSTVSTQQKQADR 284
Cdd:PRK04863 462 EQKLSVAQAAHSQfeqayqlvrkiagevsrseawdVARELLRRLREqrhLAEQLQQLRMRLSELEQRLRQQQRAERLLAE 541
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 285 YNKDLTKERDAlklelykngksNEDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEMSELLLQQFSSQS----EASG 360
Cdd:PRK04863 542 FCKRLGKNLDD-----------EDELEQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARApawlAAQD 610
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 939108073 361 SNEQLQ----QAMEERAQLESHVGQLMESLKQLQVERDQYAEN 399
Cdd:PRK04863 611 ALARLReqsgEEFEDSQDVTEYMQQLLERERELTVERDELAAR 653
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
153-599 |
4.07e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.60 E-value: 4.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 153 KELESRYQELAVALDSsyvTNKQLSSTIEELKQQNQDTLDQLEKEKKDYQQKLAkEQGALREQLQVHIQTIGI-LVSEKA 231
Cdd:COG4913 305 ARLEAELERLEARLDA---LREELDELEAQIRGNGGDRLEQLEREIERLERELE-ERERRRARLEALLAALGLpLPASAE 380
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 232 ELQTALAHTQQAARQKAGESEDLASRLQSSRQRVGELERTLSTVSTQ----QKQADRYNKDLTKERDALKLELyknGKSN 307
Cdd:COG4913 381 EFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEiaslERRKSNIPARLLALRDALAEAL---GLDE 457
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 308 EDLR------QQNSELEE------------KLRVLVAEKAAAQLG----AEELQKKLEMSELLLQQFSSQSEASGSN--- 362
Cdd:COG4913 458 AELPfvgeliEVRPEEERwrgaiervlggfALTLLVPPEHYAAALrwvnRLHLRGRLVYERVRTGLPDPERPRLDPDsla 537
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 363 EQLQQAMEE-RAQLESHVGQLM-----ESLKQLQVERDQYAEN--LKGESAMWQQRVQQM-----------AEQVHALKE 423
Cdd:COG4913 538 GKLDFKPHPfRAWLEAELGRRFdyvcvDSPEELRRHPRAITRAgqVKGNGTRHEKDDRRRirsryvlgfdnRAKLAALEA 617
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 424 EKEQRESQVQELEASLAELRSQMEEPPPPEpptgpsEAEERLQG------EVEQLQKELEGLTGQLRAQVQDNESLSHLN 497
Cdd:COG4913 618 ELAELEEELAEAEERLEALEAELDALQERR------EALQRLAEyswdeiDVASAEREIAELEAELERLDASSDDLAALE 691
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 498 REQEgrllELEREAQHWSEQAEERKQILESMQSDRTTISRALSQNRELKEQLAELQNGFVRLTNENM-EITSALQSEQHV 576
Cdd:COG4913 692 EQLE----ELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERfAAALGDAVEREL 767
|
490 500
....*....|....*....|...
gi 939108073 577 KKELARKLGELQERLGELKETVE 599
Cdd:COG4913 768 RENLEERIDALRARLNRAEEELE 790
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
250-862 |
4.39e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 47.73 E-value: 4.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 250 ESEDLASRLQSSRQRVGELERTLSTVSTQQKQADRynkdlTKERDALKLELYkngksnEDLRQQNSELEEKLRVLVAEKA 329
Cdd:PRK02224 200 EEKDLHERLNGLESELAELDEEIERYEEQREQARE-----TRDEADEVLEEH------EERREELETLEAEIEDLRETIA 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 330 AAQLG----AEELQKKLEMSELLLQQFSSQSEASGSNEQLQQAMEER-AQLESHVGQLMESLKQLQVERDQY---AENLK 401
Cdd:PRK02224 269 ETEREreelAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARrEELEDRDEELRDRLEECRVAAQAHneeAESLR 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 402 GESAMWQQRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQMEEPPPPEPPTGpsEAEERLQGEVEQLQKELEGLTG 481
Cdd:PRK02224 349 EDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAP--VDLGNAEDFLEELREERDELRE 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 482 QLRAQVQDNESLShlNREQEGRLLeleREAQHWSE--QAEERKQILESMQSDRTTISRALSQNRELKEQLAELQNGFVRL 559
Cdd:PRK02224 427 REAELEATLRTAR--ERVEEAEAL---LEAGKCPEcgQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERA 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 560 TnenmeitSALQSEQHVKKeLARKLGELQERLGELKETVELKSQEAQGLQEQRDQCLSHLQQYAAAYQQHLTAYEQLTSE 639
Cdd:PRK02224 502 E-------DLVEAEDRIER-LEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREE 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 640 KEALHKQLLLQTQLMDQLQHEEVQGKMAAEmARQELQEAQERLKASSQENQQLQAQLSLLVLPGEDMDQEEQDEEVpqps 719
Cdd:PRK02224 574 VAELNSKLAELKERIESLERIRTLLAAIAD-AEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDEARI---- 648
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 720 ltipEDLVSREAmvafcnaaiaRAEEEQARLRVQLREQKARCRSLAHLAAPVQSKLEkeavvprdmgdsvseesnqalhv 799
Cdd:PRK02224 649 ----EEAREDKE----------RAEEYLEQVEEKLDELREERDDLQAEIGAVENELE----------------------- 691
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 939108073 800 ameklqnrflevmqEKVELKERVEELEHCCIQLSGETDTIGEYIALYQNQRAVLKARHLEKEE 862
Cdd:PRK02224 692 --------------ELEELRERREALENRVEALEALYDEAEELESMYGDLRAELRQRNVETLE 740
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
174-614 |
5.09e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 47.41 E-value: 5.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 174 KQLSSTIEELKQQNQDTLDQLEKEKKDYQQKLAKEQGALREQL------QVHIQTIGILVSEKAELQTALAHTQQAARQK 247
Cdd:pfam05483 355 EATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTkfknnkEVELEELKKILAEDEKLLDEKKQFEKIAEEL 434
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 248 AGESEDLASRLQSSRQRVGELERTLSTVSTQQKQADRYNKDLTKERDALKLELYKNGKSNEDLRQQNSELEEKLRVLVAE 327
Cdd:pfam05483 435 KGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDMTLE 514
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 328 KAAAQlgaEELQKKLEMSELLLQQFSSQSEasgsneqlqQAMEERAQLESHVGQLMESLKQLQVERDQYAENLKGESAMW 407
Cdd:pfam05483 515 LKKHQ---EDIINCKKQEERMLKQIENLEE---------KEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEV 582
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 408 QQRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQMEEPPPPEPPTGPSEAE-ERLQGEVEQLQKELEGLTGQLRAQ 486
Cdd:pfam05483 583 LKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKvNKLELELASAKQKFEEIIDNYQKE 662
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 487 VQDNESlshlnrEQEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISRALSQNRELKEQLAELQNGFVRLTNenmei 566
Cdd:pfam05483 663 IEDKKI------SEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYK----- 731
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 939108073 567 tSALQSEQHVKKELARKLGELQERLGELKETVELKSQEAQGLQEQRDQ 614
Cdd:pfam05483 732 -NKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAKE 778
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
174-554 |
5.71e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.94 E-value: 5.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 174 KQLSSTIEELKQQ-NQDTLDQLEKEKKDYQQKLAKEQGALREQLQVHIQ---TIGILVSEKAELQTALAHTQQAARQKAG 249
Cdd:TIGR04523 291 NQLKSEISDLNNQkEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQlneQISQLKKELTNSESENSEKQRELEEKQN 370
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 250 ESEDLASRLQSSRQRVGELERTLSTVSTQQKQADRYNKDLTKERDALKLELYKNGKSNEDLRQQNSELEEKLRVLVAEKA 329
Cdd:TIGR04523 371 EIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDS 450
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 330 AAQLGAEELQKKLEMSELLLQQFSSQSEASGSN-EQLQQameeraQLESHVGQLMESLKQLQverdqyaeNLKGESAMWQ 408
Cdd:TIGR04523 451 VKELIIKNLDNTRESLETQLKVLSRSINKIKQNlEQKQK------ELKSKEKELKKLNEEKK--------ELEEKVKDLT 516
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 409 QRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQMEEppppepptgpseaeERLQGEVEQLQKELEGLTgqlraqvQ 488
Cdd:TIGR04523 517 KKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKK--------------ENLEKEIDEKNKEIEELK-------Q 575
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 939108073 489 DNESLSHLNREQEGRLLELEREAQHWSEQAEERKQILESMQSDrttISRALSQNRELKEQLAELQN 554
Cdd:TIGR04523 576 TQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKE---LEKAKKENEKLSSIIKNIKS 638
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
409-614 |
6.01e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 46.98 E-value: 6.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 409 QRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQMEEPPPPEPP----TGPSEAEERLQGEVEQLQKELEGLTGQLR 484
Cdd:PRK03918 186 KRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKEleelKEEIEELEKELESLEGSKRKLEEKIRELE 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 485 AQVQDNESLSHLNREQEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISRALSQNRELKEQLAELQNGFVRLtnenm 564
Cdd:PRK03918 266 ERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERL----- 340
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 939108073 565 eitsalqseqhvkKELARKLGELQERLGELKETVELkSQEAQGLQEQRDQ 614
Cdd:PRK03918 341 -------------EELKKKLKELEKRLEELEERHEL-YEEAKAKKEELER 376
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
173-611 |
6.65e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.94 E-value: 6.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 173 NKQLSSTIEELKQQNQDTLDQLEKEKKDYQQKlakeqgalREQLQVHIQTIGILVSEKAELQTALAHTQQAARQKAGESE 252
Cdd:TIGR04523 213 NKSLESQISELKKQNNQLKDNIEKKQQEINEK--------TTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIK 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 253 DLASRLQSSRQRVGELErtlstvstQQKQADrYNKDLT-------KERDALKLELYKNGKSNEDLRQQNSELEEKLRVLV 325
Cdd:TIGR04523 285 ELEKQLNQLKSEISDLN--------NQKEQD-WNKELKselknqeKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSE 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 326 AEKAAAQlgaEELQKKlemselllqqfssQSEASGSNEQLQQAMEERAQLESHVGQLMESLKQLQVERDQYAENLKGEsa 405
Cdd:TIGR04523 356 SENSEKQ---RELEEK-------------QNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKL-- 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 406 mwQQRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQMEEPPPPEPPTgpSEAEERLQGEVEQLQKELEGLTGQLRA 485
Cdd:TIGR04523 418 --QQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESL--ETQLKVLSRSINKIKQNLEQKQKELKS 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 486 QVQDNESLSHLNREQEGRLLELEREaqhwSEQAEERKQILEsmqSDRTTISRALSQ-------------NRELKEQLAEL 552
Cdd:TIGR04523 494 KEKELKKLNEEKKELEEKVKDLTKK----ISSLKEKIEKLE---SEKKEKESKISDledelnkddfelkKENLEKEIDEK 566
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 939108073 553 QNGFVRLTNENMEITSALQSEQHVKKELARKLGELQERLGELKETVELKSQEAQGLQEQ 611
Cdd:TIGR04523 567 NKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKE 625
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
176-368 |
9.83e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.16 E-value: 9.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 176 LSSTIEELKQQNQDTLDQLEKEKKDYQQKLAKEQGALR------------EQLQVHIQTIGILVSEKAELQTALAHTQ-- 241
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRKELEEAEAALEefrqknglvdlsEEAKLLLQQLSELESQLAEARAELAEAEar 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 242 -QAARQKAGESEDLASRLQSS------RQRVGELERTLSTVSTQ-----------QKQADRYNKDLTKERDALKLELYKN 303
Cdd:COG3206 242 lAALRAQLGSGPDALPELLQSpviqqlRAQLAELEAELAELSARytpnhpdvialRAQIAALRAQLQQEAQRILASLEAE 321
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 939108073 304 GKSNEDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEMSELLLQQFSSQSEASGSNEQLQQA 368
Cdd:COG3206 322 LEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEARLAEALTVG 386
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
316-665 |
1.06e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 46.48 E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 316 ELEEKLRVLVAEKAAAQLGAEELQKKLEMSELLLQQFSSQSEASGSNEQLQQAMEERAQLESHVGQLMESLKQLQVERDQ 395
Cdd:COG3096 789 ELRAERDELAEQYAKASFDVQKLQRLHQAFSQFVGGHLAVAFAPDPEAELAALRQRRSELERELAQHRAQEQQLRQQLDQ 868
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 396 YAENLKGESAM-----------WQQRVQQMAEQVHALKEEK---EQRESQVQELEASLAELRSqmeeppppepptgPSEA 461
Cdd:COG3096 869 LKEQLQLLNKLlpqanlladetLADRLEELREELDAAQEAQafiQQHGKALAQLEPLVAVLQS-------------DPEQ 935
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 462 EERLQGEVEQLQKELEGLTGQLRAQVQDNESLSHLNREQEGRLLElerEAQHWSEQAEERkqiLESMQSDRttisralsq 541
Cdd:COG3096 936 FEQLQADYLQAKEQQRRLKQQIFALSEVVQRRPHFSYEDAVGLLG---ENSDLNEKLRAR---LEQAEEAR--------- 1000
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 542 nRELKEQLAELQNgfvRLTNENMEITSaLQSEQHVKKELarkLGELQERLGELKetVELKSQEAQGLQEQRDQCLSHLQQ 621
Cdd:COG3096 1001 -REAREQLRQAQA---QYSQYNQVLAS-LKSSRDAKQQT---LQELEQELEELG--VQADAEAEERARIRRDELHEELSQ 1070
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 939108073 622 YAAAYQQHLTAYEQLTSEKEALHKQLLLQTQLMDQLQHEEVQGK 665
Cdd:COG3096 1071 NRSRRSQLEKQLTRCEAEMDSLQKRLRKAERDYKQEREQVVQAK 1114
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
153-658 |
1.09e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 46.32 E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 153 KELESRYQELAVALDSSYVTNKQLSSTIEELKQQNQDTLDQLEKEkKDYQQKLAKEQGALREQLQVHIQTIGILVSEKAE 232
Cdd:pfam01576 71 QELEEILHELESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEE-EAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSK 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 233 LQ---TALAHTQQAARQKAGESEDLASRLQSSRQRvgeLERTLSTVSTQQKQADRYNKDLTKERDALKLELYKNGKSNED 309
Cdd:pfam01576 150 LSkerKLLEERISEFTSNLAEEEEKAKSLSKLKNK---HEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAE 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 310 LRQQNSELEEKLRVLVAEKAAAQLGAEElqKKLEMSELLLQQFSSQSEASGSNEQLQQAMEERAQLESHVGQLMESLKQL 389
Cdd:pfam01576 227 LQAQIAELRAQLAKKEEELQAALARLEE--ETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEELEAL 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 390 QVERDQYAENLKGESAMWQQRVQQMAEQVHALKEEKEQRESQVQELE----ASLAELRSQMEEPPPPEPPTgpSEAEERL 465
Cdd:pfam01576 305 KTELEDTLDTTAAQQELRSKREQEVTELKKALEEETRSHEAQLQEMRqkhtQALEELTEQLEQAKRNKANL--EKAKQAL 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 466 QGEVEQLQKELEGLTGqlraQVQDNEslsHLNREQEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISRALSqnrEL 545
Cdd:pfam01576 383 ESENAELQAELRTLQQ----AKQDSE---HKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLN---EA 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 546 KEQLAELQNGFVRLTNENMEITSALQSEQHVKKELARKLGE-------LQERLGELKETVELKSQEAQGLQEQRDQCLSH 618
Cdd:pfam01576 453 EGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQledernsLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKK 532
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 939108073 619 LQQYAAAYQQHLTAYEQLTSEKEALHKQLLLQTQLMDQLQ 658
Cdd:pfam01576 533 LEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLE 572
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
409-826 |
1.21e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.91 E-value: 1.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 409 QRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQMEEPPPPEPPTGPSEAEERLQGEVEQLQKELEGLTGQLRAQVQ 488
Cdd:COG4717 81 KEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEALEAELAELPERLEELEERLEELRE 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 489 DNESLSHLNREQEGRLLELEREAQHWSEQAEERkqilesMQSDRTTISRALSQNRELKEQLAELQNGFVRLTNENMEITS 568
Cdd:COG4717 161 LEEELEELEAELAELQEELEELLEQLSLATEEE------LQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLEN 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 569 ALQSEQHVKK--ELARKLGELQERLGELKETVELKSQEAQGLQEQRDQCLSHLQQYAAAYQQHLTAYEQLTSEKEALHKQ 646
Cdd:COG4717 235 ELEAAALEERlkEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALE 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 647 LLLQTQLMDQLQHEEVQGKMAAEMARQELQEAQERLKASSQENQQLqaqlsllvlpgEDMDQEEQDEEvpQPSLTIPEDL 726
Cdd:COG4717 315 ELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELE-----------EELQLEELEQE--IAALLAEAGV 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 727 VSREAMvafcnAAIARAEEEQARLRVQLREQKARCRSLAHLAAPVQSKLEKEAVvprdmgdsvsEESNQALHVAMEKLQN 806
Cdd:COG4717 382 EDEEEL-----RAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEEL----------EEELEELEEELEELEE 446
|
410 420
....*....|....*....|
gi 939108073 807 RFLEVMQEKVELKERVEELE 826
Cdd:COG4717 447 ELEELREELAELEAELEQLE 466
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
296-657 |
1.46e-04 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 45.82 E-value: 1.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 296 LKLELyKNGKSNEDLRQQNS--ELEEKLRVLVAEKAAAQlGAEELQKKLE----MSELLLQQFSSQSEASGSNEQLQQAM 369
Cdd:PRK10929 28 ITQEL-EQAKAAKTPAQAEIveALQSALNWLEERKGSLE-RAKQYQQVIDnfpkLSAELRQQLNNERDEPRSVPPNMSTD 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 370 EERAQLESHVGQLMESLKQLQVERDQYAENLKGESAMWQQRVQ---QMAE------------------QVHALKEEKEQR 428
Cdd:PRK10929 106 ALEQEILQVSSQLLEKSRQAQQEQDRAREISDSLSQLPQQQTEarrQLNEierrlqtlgtpntplaqaQLTALQAESAAL 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 429 ESQVQELEasLAELRSQMEEPPPpepptgpseaeeRLQGEV-----EQLQKELEGLTGQLRAQVQdneslshlnREQEgr 503
Cdd:PRK10929 186 KALVDELE--LAQLSANNRQELA------------RLRSELakkrsQQLDAYLQALRNQLNSQRQ---------REAE-- 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 504 lLELEREAQHWSEQAEERKQILESMQSDRtTISRALSQNRELKEQLAELQNgfvRLTNENMEITSALQS--EQHVKKELA 581
Cdd:PRK10929 241 -RALESTELLAEQSGDLPKSIVAQFKINR-ELSQALNQQAQRMDLIASQQR---QAASQTLQVRQALNTlrEQSQWLGVS 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 582 RKLGE-LQ---ERLGELKETVELKSQEAQgLQEQRDQCLSHLQQYAAAYQQHLTAYEQLTSEKEA-LHKQLLLQTQLMDQ 656
Cdd:PRK10929 316 NALGEaLRaqvARLPEMPKPQQLDTEMAQ-LRVQRLRYEDLLNKQPQLRQIRQADGQPLTAEQNRiLDAQLRTQRELLNS 394
|
.
gi 939108073 657 L 657
Cdd:PRK10929 395 L 395
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
246-677 |
1.53e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 45.87 E-value: 1.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 246 QKAGESEDLASRLQSSRQRVGELERTLSTVSTQQKQADRYNKDLTKERDALKLELYKNGKSNEDLrQQNSELEEKLRVLV 325
Cdd:pfam05483 251 EKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKAL-EEDLQIATKTICQL 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 326 AEKAAAQLgaEELQKKLEMSELLLQQFSSqseASGSNEQLQQAMEERaqLESHVGQLMESLKQLQVERDQYAE--NLKGE 403
Cdd:pfam05483 330 TEEKEAQM--EELNKAKAAHSFVVTEFEA---TTCSLEELLRTEQQR--LEKNEDQLKIITMELQKKSSELEEmtKFKNN 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 404 SAMWQQRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQMEEPPP-----PEPPTGPSEAEERLQGEVEQLQKELEg 478
Cdd:pfam05483 403 KEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKeihdlEIQLTAIKTSEEHYLKEVEDLKTELE- 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 479 ltgqlRAQVQDNESLSHLNReqegRLLELEREAQHWSEQAEERKQILESMQSDRTTISRALSQNRELKEQLAELQNGFvr 558
Cdd:pfam05483 482 -----KEKLKNIELTAHCDK----LLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDEL-- 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 559 ltnenmeitsalqseQHVKKELARKLGELQERLGELKETVELKSQEAQGLQEQRDQCLSHLQQYAAAYQQHLTAYEQLTS 638
Cdd:pfam05483 551 ---------------ESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQ 615
|
410 420 430
....*....|....*....|....*....|....*....
gi 939108073 639 EKEALHKQLLLQTQLMDQLQHEEVQGKMAAEMARQELQE 677
Cdd:pfam05483 616 ENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEE 654
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
408-672 |
1.54e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.78 E-value: 1.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 408 QQRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQmeeppppeppTGPSEAEERLQGEVEQLQkelegltgQLRAQV 487
Cdd:COG3206 167 ELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQK----------NGLVDLSEEAKLLLQQLS--------ELESQL 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 488 QDNESlshlnreqegRLLELEREAQHWSEQAEERKQILESMQSDrTTISRALSQNRELKEQLAELQNgfvRLTNENMEIT 567
Cdd:COG3206 229 AEARA----------ELAEAEARLAALRAQLGSGPDALPELLQS-PVIQQLRAQLAELEAELAELSA---RYTPNHPDVI 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 568 SALQSEQHVKKELARklgELQERLGELKETVELKSQEAQGLQEQRDQclshLQQYAAAYQQHLTAYEQLTSEKEALHKQL 647
Cdd:COG3206 295 ALRAQIAALRAQLQQ---EAQRILASLEAELEALQAREASLQAQLAQ----LEARLAELPELEAELRRLEREVEVARELY 367
|
250 260
....*....|....*....|....*
gi 939108073 648 llqTQLMDQLQHEEVQGKMAAEMAR 672
Cdd:COG3206 368 ---ESLLQRLEEARLAEALTVGNVR 389
|
|
| COG4995 |
COG4995 |
Uncharacterized conserved protein, contains CHAT domain [Function unknown]; |
123-541 |
1.74e-04 |
|
Uncharacterized conserved protein, contains CHAT domain [Function unknown];
Pssm-ID: 444019 [Multi-domain] Cd Length: 711 Bit Score: 45.34 E-value: 1.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 123 SLRQLSQQLNGLVSESTSYINGEGLTSSNMKELESRYQELAVALDSSYVTNKQLSSTIEELKQQNQDTLDQLEKEKKDYQ 202
Cdd:COG4995 35 AAALLLLALLALLLALAAAAAAALAAAALALALLAAAALALLLLALALAALALALLAAALALALAAAALAALALLAALLA 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 203 QKLAKEQGALREQLQVHIQTIGILVSEKAELQTALAHTQQAARQKAGESEDLASRLQSSRQRVGELERTLSTVSTQQKQA 282
Cdd:COG4995 115 LAAAAALLALLAALALLALLAALAAALAAAAAAALAAALAAAAAAAAAAALLALALALAAAALALLALLLAALAAALAAA 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 283 DRYNKDLTKERDALKLELYKNGKSNEDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEMSELLLQQFSSQSEASGSN 362
Cdd:COG4995 195 AAALALLLALLLLAALAAALAAALAALLLALLALAAALLALLLLALLALAAAAAALAAAAAALLALAAALLLLAALAALA 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 363 EQLQQAMEERAQLESHVGQLMESLKQLQVERDQYAENLKGESAMWQQRVQQMAEQVHALKEEKEQRESQVQELEASLAEL 442
Cdd:COG4995 275 AAAAAAALAALALAAALALAAAALALALLLAAAAAAALAALALLLLAALLLLLAALALLALLLLLAAAALLAAALAAALA 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 443 RSQMEEPPPPEPPTGPSEAEERLQGEVEQLQKELEGLTGQLRAQVQDNESLSHLNREQEGRLLELEREAQHWSEQAEERK 522
Cdd:COG4995 355 LAAALALALLAALLLLLAALLALLLEALLLLLLALLAALLLLAAALLALAAAQLLRLLLAALALLLALAAYAAARLALLA 434
|
410
....*....|....*....
gi 939108073 523 QILESMQSDRTTISRALSQ 541
Cdd:COG4995 435 LIEYIILPDRLYAFVQLYQ 453
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
154-689 |
1.86e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 45.48 E-value: 1.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 154 ELESRYQELAVALDSSYVTNKQLSSTI----EELKQQNQDTlDQLEKEKKDYQ---QKLAKEQGALREQLQVHIQTIGIL 226
Cdd:pfam05483 251 EKENKMKDLTFLLEESRDKANQLEEKTklqdENLKELIEKK-DHLTKELEDIKmslQRSMSTQKALEEDLQIATKTICQL 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 227 VSEKA----ELQTALAHTQQAARQKAGESEDLASRLQSSRQRVGELERTLSTVSTQQKQADRYNKDLTKERDALKLELyk 302
Cdd:pfam05483 330 TEEKEaqmeELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVEL-- 407
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 303 ngksnEDLRQQNSELEEklrvLVAEKAAAQLGAEELQKKLEMSELLLQqfSSQSEASGSNEQLQQAMEERAQLESHVGQL 382
Cdd:pfam05483 408 -----EELKKILAEDEK----LLDEKKQFEKIAEELKGKEQELIFLLQ--AREKEIHDLEIQLTAIKTSEEHYLKEVEDL 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 383 MESLKQLQVERDQYAENLKGESAMWQQRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQmeeppppepptgpSEAE 462
Cdd:pfam05483 477 KTELEKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENL-------------EEKE 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 463 ERLQGEVEQLQKELEGLTGQLRAQVQDNE----SLSHLNREQEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISR- 537
Cdd:pfam05483 544 MNLRDELESVREEFIQKGDEVKCKLDKSEenarSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKk 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 538 ALSQNRELKE---QLAELQNGFVRLTNENMEITSALQSEQHVKKELARKLgelqerLGELkETVELKSQEAQGLQEQRD- 613
Cdd:pfam05483 624 GSAENKQLNAyeiKVNKLELELASAKQKFEEIIDNYQKEIEDKKISEEKL------LEEV-EKAKAIADEAVKLQKEIDk 696
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 614 QCLSHLQQYAAAYQQHLTAYEQLTSEKEA---LHK---------QLLLQTQLMDqLQHEEVQGKMAAEMARQElqeaQER 681
Cdd:pfam05483 697 RCQHKIAEMVALMEKHKHQYDKIIEERDSelgLYKnkeqeqssaKAALEIELSN-IKAELLSLKKQLEIEKEE----KEK 771
|
....*...
gi 939108073 682 LKASSQEN 689
Cdd:pfam05483 772 LKMEAKEN 779
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
149-561 |
1.96e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.44 E-value: 1.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 149 SSNMKELESRYQELAVALDSSYVTNKQLSSTIEELKQQNQDTLDQLEKEKKDYqqKLAKEQGALREQLQVHIQTIGILVS 228
Cdd:PRK03918 309 LREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERH--ELYEEAKAKKEELERLKKRLTGLTP 386
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 229 EKAELQTALAHTQQAARQKagESEDLASRLQSSRQRVGELERTLSTVSTQQKQADRYNKDLTKERDALKLELYKngKSNE 308
Cdd:PRK03918 387 EKLEKELEELEKAKEEIEE--EISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKELLEEYT--AELK 462
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 309 DLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEMSELLLQQFSSQSEASGSN-EQLQQAMEERAQLESHVGQLMESLK 387
Cdd:PRK03918 463 RIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNlEELEKKAEEYEKLKEKLIKLKGEIK 542
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 388 QLQVERDQYAEnLKGESAMWQQRVQQMAEQVHALKEEKEQRE-SQVQELEASLAELRSQMEEPPPPEPPTGPSEAEER-- 464
Cdd:PRK03918 543 SLKKELEKLEE-LKKKLAELEKKLDELEEELAELLKELEELGfESVEELEERLKELEPFYNEYLELKDAEKELEREEKel 621
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 465 --LQGEVEQLQKELEGLTGQLRAQVQDNESLSHL-----NREQEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISR 537
Cdd:PRK03918 622 kkLEEELDKAFEELAETEKRLEELRKELEELEKKyseeeYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKE 701
|
410 420
....*....|....*....|....
gi 939108073 538 ALSQNRELKEQLAELQNGFVRLTN 561
Cdd:PRK03918 702 ELEEREKAKKELEKLEKALERVEE 725
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
148-552 |
2.91e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.76 E-value: 2.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 148 TSSNMKELESRYQELAVALDS-----SYVTNKQLSSTIEELKQQNQDTLDQLEKEKKDYQQKLAKEQGALREQLQVHiqt 222
Cdd:COG4717 100 LEEELEELEAELEELREELEKlekllQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQ--- 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 223 igilvsekaelqtalahtQQAARQKAGESEDLASRLQSSRQRVGELERTLSTVSTQQKQADRYNKDLTKERDALKLELYk 302
Cdd:COG4717 177 ------------------EELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELE- 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 303 ngksNEDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEMSELL--------LQQFSSQSEASGSNEQLQQAMEERAQ 374
Cdd:COG4717 238 ----AAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLflvlgllaLLFLLLAREKASLGKEAEELQALPAL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 375 LESHVGQLMESLKQLQVERDQYAENLKGESAMWQQRVQQMAEqvhalkEEKEQRESQVQELEASLAEL--RSQMEEPPPP 452
Cdd:COG4717 314 EELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLRE------AEELEEELQLEELEQEIAALlaEAGVEDEEEL 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 453 EPPTGPSEAEERLQGEVEQLQKELEGLTGQLRAQVQ--DNESLSHLNREQEGRLLELEREAQHWSEQAEERKQILESMQS 530
Cdd:COG4717 388 RAALEQAEEYQELKEELEELEEQLEELLGELEELLEalDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEE 467
|
410 420
....*....|....*....|..
gi 939108073 531 DRtTISRALSQNRELKEQLAEL 552
Cdd:COG4717 468 DG-ELAELLQELEELKAELREL 488
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
287-603 |
4.17e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 44.28 E-value: 4.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 287 KDLTKERDALKLELYKNGKSNEDLRQQNSELEEKLRVLvaEKAAAQLgaEELQKKLEMSELLLQQFSSQSeasgsnEQLQ 366
Cdd:PRK03918 172 KEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREI--NEISSEL--PELREELEKLEKEVKELEELK------EEIE 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 367 QAMEERAQLESHVGQLMESLKQLQVERDQYAENLK--GESAMWQQRVQQMAEQVHALKEEKEQRESQVQELEASLAELRS 444
Cdd:PRK03918 242 ELEKELESLEGSKRKLEEKIRELEERIEELKKEIEelEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 445 QMEEPPPPEPPTGPSEAE-ERLQGEVEQLQKELEGLTGQLRAQVQDNESLSHLNR-EQEGRLLELEREAQHWSEQAEERK 522
Cdd:PRK03918 322 EINGIEERIKELEEKEERlEELKKKLKELEKRLEELEERHELYEEAKAKKEELERlKKRLTGLTPEKLEKELEELEKAKE 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 523 QILESMQSDRTTISRALSQNRELKEQLAELQNGFVRLTNENMEITsalqsEQHVKKELARKLGELQERLGELKETVELKS 602
Cdd:PRK03918 402 EIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELT-----EEHRKELLEEYTAELKRIEKELKEIEEKER 476
|
.
gi 939108073 603 Q 603
Cdd:PRK03918 477 K 477
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
165-527 |
4.33e-04 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 44.27 E-value: 4.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 165 ALDSSYVTNKQLSSTIEELK-----------QQNQDTLDQLEKEK------KDYQQ------KLAKEqgaLREQLQVHIQ 221
Cdd:PRK10929 17 AYAATAPDEKQITQELEQAKaaktpaqaeivEALQSALNWLEERKgsleraKQYQQvidnfpKLSAE---LRQQLNNERD 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 222 TIgilvsEKAELQTALAHTQQAARQKAGESEDLASRLQSSRQRVGELERTLSTVSTQQKQADRYNKDLTKERDALklely 301
Cdd:PRK10929 94 EP-----RSVPPNMSTDALEQEILQVSSQLLEKSRQAQQEQDRAREISDSLSQLPQQQTEARRQLNEIERRLQTL----- 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 302 knGKSNEDLRQ-QNSELEEK---LRVLVAEKAAAQLGA-----------EELQKKLEMSELLLQQFSSQseasgSNEQLQ 366
Cdd:PRK10929 164 --GTPNTPLAQaQLTALQAEsaaLKALVDELELAQLSAnnrqelarlrsELAKKRSQQLDAYLQALRNQ-----LNSQRQ 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 367 Q----AMEERAQLESHVGQLMESL-KQLQVERDQyaenlkgeSAMWQQRVQQMaeqvHALKEEKEQRESQVQELEASLAE 441
Cdd:PRK10929 237 ReaerALESTELLAEQSGDLPKSIvAQFKINREL--------SQALNQQAQRM----DLIASQQRQAASQTLQVRQALNT 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 442 LRSQmeeppppEPPTGPSEA-EERLQGEVEQL-----QKELEGLTGQLRAQVQDNESLshLNREQEGRLLELEREAQHWS 515
Cdd:PRK10929 305 LREQ-------SQWLGVSNAlGEALRAQVARLpempkPQQLDTEMAQLRVQRLRYEDL--LNKQPQLRQIRQADGQPLTA 375
|
410
....*....|..
gi 939108073 516 EQaeerKQILES 527
Cdd:PRK10929 376 EQ----NRILDA 383
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
153-341 |
6.61e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 43.90 E-value: 6.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 153 KELESRYQELAVALDSSYVTNKQLSSTIEELKQQNQDTLDQlEKEKKDYQQKLAKEQGALREQLQVHIQTIGILVSEKAE 232
Cdd:TIGR02169 808 SRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQ-IKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGD 886
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 233 LQTALAHTQQAARQKAGESEDLASRLQSSRQRVGELERTLSTVSTQQKQADRYNK-------------DLTKERDALKLE 299
Cdd:TIGR02169 887 LKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGedeeipeeelsleDVQAELQRVEEE 966
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 939108073 300 LYKNGKSN-------EDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKK 341
Cdd:TIGR02169 967 IRALEPVNmlaiqeyEEVLKRLDELKEKRAKLEEERKAILERIEEYEKK 1015
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
459-688 |
7.23e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.47 E-value: 7.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 459 SEAEERLQGEVEQLQKELEgltgqlraqvqdneslshlnrEQEGRLLELeREAQHWSEQAEERKQILESMQSDRTTISRA 538
Cdd:COG3206 174 RKALEFLEEQLPELRKELE---------------------EAEAALEEF-RQKNGLVDLSEEAKLLLQQLSELESQLAEA 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 539 LSQNRELKEQLAELQNgfvRLTNENMEITSALQSEqhVKKELARKLGELQERLGELKETVELKSQEAQGLQEQRDQCLSH 618
Cdd:COG3206 232 RAELAEAEARLAALRA---QLGSGPDALPELLQSP--VIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQ 306
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 939108073 619 LQQYAAAYQQHLTA-YEQLTSEKEALHKQLLLQTQLMDQLQHEEVQGKMA---AEMARQELQEAQERLKASSQE 688
Cdd:COG3206 307 LQQEAQRILASLEAeLEALQAREASLQAQLAQLEARLAELPELEAELRRLereVEVARELYESLLQRLEEARLA 380
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
289-446 |
1.03e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.83 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 289 LTKERDALKLELykngksnEDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEMSELLLQQFSSQSEASGSNEQLQQA 368
Cdd:COG1579 22 LEHRLKELPAEL-------AELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKEYEAL 94
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 939108073 369 MEERAQLESHVGQLMESLKQLQVERDQYAENLKGESAMWQQRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQM 446
Cdd:COG1579 95 QKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAKI 172
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
151-497 |
1.33e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 42.42 E-value: 1.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 151 NMKELESRYQELAVALDSSYVTNKQLSSTIEELKQQNQDTLdqlekEKKDYQQKLA------KEQGALRE---QLQVHIQ 221
Cdd:pfam05557 147 KASEAEQLRQNLEKQQSSLAEAEQRIKELEFEIQSQEQDSE-----IVKNSKSELAripeleKELERLREhnkHLNENIE 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 222 TIGILVSEKAELQTALAHTQQAARQKAG---ESEDLASRLQSSR---QRVGELERTLSTVSTQQKQADRYNKDLTKErda 295
Cdd:pfam05557 222 NKLLLKEEVEDLKRKLEREEKYREEAATlelEKEKLEQELQSWVklaQDTGLNLRSPEDLSRRIEQLQQREIVLKEE--- 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 296 lklelykngksNEDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEMSELL---------------------LQQFSS 354
Cdd:pfam05557 299 -----------NSSLTSSARQLEKARRELEQELAQYLKKIEDLNKKLKRHKALvrrlqrrvllltkerdgyraiLESYDK 367
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 355 QSEASGSNEQLQQAMEERAQL----ESHVGQLMESLKQLQVERDQYAENLKGESAMWQQRVQQ--------MAEQVHALK 422
Cdd:pfam05557 368 ELTMSNYSPQLLERIEEAEDMtqkmQAHNEEMEAQLSVAEEELGGYKQQAQTLERELQALRQQesladpsySKEEVDSLR 447
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 423 EEKEQRESQVQELEASLAELRSQMEEPPPPEPPTGP------------SEAEERLQGEVEQLQKELEGLTGQLRAQVQDN 490
Cdd:pfam05557 448 RKLETLELERQRLREQKNELEMELERRCLQGDYDPKktkvlhlsmnpaAEAYQQRKNQLEKLQAEIERLKRLLKKLEDDL 527
|
....*..
gi 939108073 491 ESLSHLN 497
Cdd:pfam05557 528 EQVLRLP 534
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
181-442 |
1.50e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 42.63 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 181 EELKQQNQDTLDQLEKEKKDYQQKLAKEQGALREQ----LQVHiQTIGILvsEKAELQTALAHTqqAARQKAGESEDLAS 256
Cdd:COG3096 374 AEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQqtraIQYQ-QAVQAL--EKARALCGLPDL--TPENAEDYLAAFRA 448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 257 RLQSSRQRVGELERTLSTVSTQQKQADRYNKDLTK-----ERDA---LKLELYKNGKSNEDLRQQNSELEEKLRVL---V 325
Cdd:COG3096 449 KEQQATEEVLELEQKLSVADAARRQFEKAYELVCKiagevERSQawqTARELLRRYRSQQALAQRLQQLRAQLAELeqrL 528
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 326 AEKAAAQLGAEELQKKL-------EMSELLLQQFSSQSEasGSNEQLQQAMEERAQLESHVGQLMESLKQLQVE------ 392
Cdd:COG3096 529 RQQQNAERLLEEFCQRIgqqldaaEELEELLAELEAQLE--ELEEQAAEAVEQRSELRQQLEQLRARIKELAARapawla 606
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 939108073 393 --------RDQYAENLKGESAMWQQRvQQMAEQVHALKEEKEQRESQVQELEASLAEL 442
Cdd:COG3096 607 aqdalerlREQSGEALADSQEVTAAM-QQLLEREREATVERDELAARKQALESQIERL 663
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
416-878 |
1.50e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 42.72 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 416 EQVHALKEEKEQRE--SQVQELEASLAELRSQMEEPPPPEPPTGP---------SEAEERLQgEVEQLQKELEGLTGQLR 484
Cdd:PRK02224 190 DQLKAQIEEKEEKDlhERLNGLESELAELDEEIERYEEQREQAREtrdeadevlEEHEERRE-ELETLEAEIEDLRETIA 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 485 AQVQDNESLSHLNREQEGRLLELERE------------------AQHWSEQAEERKQILESMQSDRTTISRALSQNRELK 546
Cdd:PRK02224 269 ETEREREELAEEVRDLRERLEELEEErddllaeaglddadaeavEARREELEDRDEELRDRLEECRVAAQAHNEEAESLR 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 547 EQLAELQNGFVRLTNENMEITSALQSEQHVKKELARKLGELQERLGELKETVElksqeaqGLQEQRDQCLSHLqqyaaay 626
Cdd:PRK02224 349 EDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFG-------DAPVDLGNAEDFL------- 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 627 qqhltayEQLTSEKEALHKQLllqTQLMDQLQH-EEVQGKMAAEMARQELQEAQERLKASSQENQQLQAQLSLLVLPGED 705
Cdd:PRK02224 415 -------EELREERDELRERE---AELEATLRTaRERVEEAEALLEAGKCPECGQPVEGSPHVETIEEDRERVEELEAEL 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 706 MDQEEQDEEVPQpSLTIPEDLVSREAMVAFCNAAIARAEEEQARLRVQLREQKARCRSLAHLAApvqsKLEKEAVVPRdm 785
Cdd:PRK02224 485 EDLEEEVEEVEE-RLERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAA----ELEAEAEEKR-- 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 786 gdsvseESNQALHVAMEKLQNRFLEVMQEKVELKERVEELEHCCIQLSgETDTIGEYIALYQNQRAVLKARHLEKEEYIS 865
Cdd:PRK02224 558 ------EAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRTLLA-AIADAEDEIERLREKREALAELNDERRERLA 630
|
490
....*....|...
gi 939108073 866 RLAQDKEEMKVKL 878
Cdd:PRK02224 631 EKRERKRELEAEF 643
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
460-892 |
1.57e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.45 E-value: 1.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 460 EAEERLQGEVEQLQKELEGLTGQLRAQVQDNESLSHLNR--EQEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISR 537
Cdd:COG4717 81 KEAEEKEEEYAELQEELEELEEELEELEAELEELREELEklEKLLQLLPLYQELEALEAELAELPERLEELEERLEELRE 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 538 ALSQNRELKEQLAELQNGFVRLTNEnmeitSALQSEQHVKkELARKLGELQERLGELKETVELKSQEAQGLQEQRDQCLS 617
Cdd:COG4717 161 LEEELEELEAELAELQEELEELLEQ-----LSLATEEELQ-DLAEELEELQQRLAELEEELEEAQEELEELEEELEQLEN 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 618 hlQQYAAAYQQHLTAYEQLTSEKEALHKQLLLQTQLMDQLqhEEVQGKMAAEMARQELQEAQERLKASSQENQQLQAQLS 697
Cdd:COG4717 235 --ELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLI--LTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQAL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 698 LLVLPGEDMDQEEQDEEVPQPSLTIPEDLVSREAMVAFCNAAIARAEEEQARLRVQLREQKarcrsLAHLAAPVQSKLEK 777
Cdd:COG4717 311 PALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQE-----IAALLAEAGVEDEE 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 778 EAVvprdmgdsvseesnqalhvameklqnRFLEVMQEKVELKERVEELEHcciQLSGETDTIGEYIAlyQNQRAVLKARH 857
Cdd:COG4717 386 ELR--------------------------AALEQAEEYQELKEELEELEE---QLEELLGELEELLE--ALDEEELEEEL 434
|
410 420 430
....*....|....*....|....*....|....*
gi 939108073 858 LEKEEYISRLAQDKEEMKVKLLELQELVLRLVNER 892
Cdd:COG4717 435 EELEEELEELEEELEELREELAELEAELEQLEEDG 469
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
169-606 |
1.59e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 42.31 E-value: 1.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 169 SYVTNKQLSSTIEELKQQNQDTLDQLEKEKKDYQQKLAKEQGALREQLQVHIQ---TIGILVSEKAELQTALAHTQQAAR 245
Cdd:TIGR04523 20 SYVGYKNIANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNsnnKIKILEQQIKDLNDKLKKNKDKIN 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 246 QKAGESEDLASRLQSSRQRVGELERTLSTVSTQQKQADRYNKDLTKERDALKLELYKNGKSNEDLRQQNSELEEKLRVLV 325
Cdd:TIGR04523 100 KLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLE 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 326 AEKAAAQLGAEELQKKLEMSELLLQQFSSQSEASGS-NEQLQQAMEERAQLESHVGQLMESLKQLQVE---RDQYAENLK 401
Cdd:TIGR04523 180 KEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSlESQISELKKQNNQLKDNIEKKQQEINEKTTEisnTQTQLNQLK 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 402 GESAMWQQRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQMEeppppepptgpSEAEERLQGEVEQLQKELEGLTG 481
Cdd:TIGR04523 260 DEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKE-----------QDWNKELKSELKNQEKKLEEIQN 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 482 QLRaqvQDNESLSHLNRE---QEGRLLELEREAQHWSEQAEERKQILESMQSDrttISRALSQNRELKEQLAELQNGFVR 558
Cdd:TIGR04523 329 QIS---QNNKIISQLNEQisqLKKELTNSESENSEKQRELEEKQNEIEKLKKE---NQSYKQEIKNLESQINDLESKIQN 402
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 939108073 559 LTNENMEITSALQSEQHVKKELARKLGELQERLGELKETV-ELKSQEAQ 606
Cdd:TIGR04523 403 QEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIkDLTNQDSV 451
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
463-647 |
1.89e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 41.80 E-value: 1.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 463 ERLQGEVEQLQKELEGLTGQLRAQVQDNESLSHLNREQEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISRALSQN 542
Cdd:pfam07888 58 EKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSEELSEEKDALLAQRAAHEARIRELEED 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 543 -RELKEQLAELQNGFVRLTNENMEITSALQSEQHVKKELARKLGELQERLGELKetveLKSQEAQGLQEQRDQCLSHLQQ 621
Cdd:pfam07888 138 iKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLS----KEFQELRNSLAQRDTQVLQLQD 213
|
170 180
....*....|....*....|....*.
gi 939108073 622 YAAAYQQHLTAYEQLTSEKEALHKQL 647
Cdd:pfam07888 214 TITTLTQKLTTAHRKEAENEALLEEL 239
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
162-388 |
1.90e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 1.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 162 LAVALDSSYVTNKQLSSTIEELKQQnqdtLDQLEKEkkdyQQKLAKEQGALREQLQVHIQTIGILVSEKAELQTALAHTQ 241
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQE----IAELEKE----LAALKKEEKALLKQLAALERRIAALARRIRALEQELAALE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 242 QAARQKAGESEDLASRLQSSRQRVGELERTLSTVSTQQK-----------QADR---YNKDLTKERDALKLELYKNGKSN 307
Cdd:COG4942 83 AELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPlalllspedflDAVRrlqYLKYLAPARREQAEELRADLAEL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 308 EDLRQQNSELEEKLRVLVAEKAAAQlgaEELQKKLEMSELLLQQFSSQSEAsgSNEQLQQAMEERAQLESHVGQLMESLK 387
Cdd:COG4942 163 AALRAELEAERAELEALLAELEEER---AALEALKAERQKLLARLEKELAE--LAAELAELQQEAEELEALIARLEAEAA 237
|
.
gi 939108073 388 Q 388
Cdd:COG4942 238 A 238
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
182-415 |
2.00e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 182 ELKQQNQDTLDQLEKEKKDYQQKLA---KEQGALREQLQVHIQTIGILVSEKAELQTALAHTQQAARQKAGESEDLASRL 258
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAalkKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 259 QSSRQRVGELERTLSTVSTQQkqadrYNKDLTKERDALKLElykngKSNEDLRQQNSELEEKLRVLVAEKAAAQLGAEEL 338
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQP-----PLALLLSPEDFLDAV-----RRLQYLKYLAPARREQAEELRADLAELAALRAEL 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 339 QKKLEmselllQQFSSQSEASGSNEQLQQAMEER----AQLESHVGQLMESLKQLQVERDQYAENLKGESAMWQQRVQQM 414
Cdd:COG4942 170 EAERA------ELEALLAELEEERAALEALKAERqkllARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
.
gi 939108073 415 A 415
Cdd:COG4942 244 P 244
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
347-491 |
2.36e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 41.49 E-value: 2.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 347 LLLQQFSSQsEASGSNEQLQQ------------AMEER--AQLESHVGQLMESLKQLQVERDQ----YAEnLKGESAMWQ 408
Cdd:PRK09039 38 VVAQFFLSR-EISGKDSALDRlnsqiaeladllSLERQgnQDLQDSVANLRASLSAAEAERSRlqalLAE-LAGAGAAAE 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 409 QRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQMEEPPPPEPPtgpSEAEER----------------LQGEVEQL 472
Cdd:PRK09039 116 GRAGELAQELDSEKQVSARALAQVELLNQQIAALRRQLAALEAALDA---SEKRDResqakiadlgrrlnvaLAQRVQEL 192
|
170
....*....|....*....
gi 939108073 473 QKELEGLTGQLRAQVQDNE 491
Cdd:PRK09039 193 NRYRSEFFGRLREILGDRE 211
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
511-714 |
2.59e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.29 E-value: 2.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 511 AQHWSEQAEERKQILESMQSDRTTISRALSQNRELKEQLAELQNGFVRLTNENMEITSALQSEQHVKKELARKLGELQER 590
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 591 LGELKETVELKSQEAQGLQEQRDQCLSHLQQYAAAYQQHLTAYEQLTSEKEALHKQLLLQTQLMDQLQHEEVQGKMAAEM 670
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEA 178
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 939108073 671 ARQELQEAQERLKASSQENQQLQAQLSLLVLPGEDMDQEEQDEE 714
Cdd:COG4942 179 LLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEA 222
|
|
| HOOK |
pfam05622 |
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from ... |
308-689 |
2.64e-03 |
|
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organizms. The different members of the human gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three human HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas this central coiled-coil motif mediates homodimerization and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes, whereas both HOOK1 and HOOK2 are localized to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head. This entry includes the central coiled-coiled domain and the divergent C-terminal domain.
Pssm-ID: 461694 [Multi-domain] Cd Length: 528 Bit Score: 41.60 E-value: 2.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 308 EDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEMSElllqQFSSQSEASGSneqlqqameERAQLESHVGQLMESLK 387
Cdd:pfam05622 10 DELAQRCHELDQQVSLLQEEKNSLQQENKKLQERLDQLE----SGDDSGTPGGK---------KYLLLQKQLEQLQEENF 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 388 QLQVERDQY---AENLKGESAMWQQRVQQM---AEQVHALKEE-KEQRES--QVQELEAS----------LAELRSQMEE 448
Cdd:pfam05622 77 RLETARDDYrikCEELEKEVLELQHRNEELtslAEEAQALKDEmDILRESsdKVKKLEATvetykkkledLGDLRRQVKL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 449 PPPP----EPPTGPSEAEER----LQGEVEQLQKELEGLTGQLRAQVQDNESLSHLNREQEGRLLELEREAQHWSEQAEE 520
Cdd:pfam05622 157 LEERnaeyMQRTLQLEEELKkanaLRGQLETYKRQVQELHGKLSEESKKADKLEFEYKKLEEKLEALQKEKERLIIERDT 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 521 RKQILESM-----------QSDRTTISRALSQNRELKEQL-AELQNGFVRLTNEN-MEITSALQSEQHVKKELARKLGEL 587
Cdd:pfam05622 237 LRETNEELrcaqlqqaelsQADALLSPSSDPGDNLAAEIMpAEIREKLIRLQHENkMLRLGQEGSYRERLTELQQLLEDA 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 588 QERLGELKETVELKSQEAQGLQEQRDQCLSHLQQYAAAYQQHLTAYEQLTSEKEALHKqllLQTQLMD-QLQHEEVQGKM 666
Cdd:pfam05622 317 NRRKNELETQNRLANQRILELQQQVEELQKALQEQGSKAEDSSLLKQKLEEHLEKLHE---AQSELQKkKEQIEELEPKQ 393
|
410 420
....*....|....*....|...
gi 939108073 667 AAEMArQELQEAQERLKASSQEN 689
Cdd:pfam05622 394 DSNLA-QKIDELQEALRKKDEDM 415
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
173-688 |
2.91e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 41.82 E-value: 2.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 173 NKQLSSTIEELKQQNQDTLDQLEKeKKDYQQKLAkeqgALREQLQvhiqtigilvsekaelqtalahtqqaarqkagese 252
Cdd:PRK11281 51 QKLLEAEDKLVQQDLEQTLALLDK-IDRQKEETE----QLKQQLA----------------------------------- 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 253 dlasrlqssrqrvgelertlstvstqqkQADRYNKDLTKERDALKlelyknGKSNEDLRQQNSeleeklrvlvaekaaaQ 332
Cdd:PRK11281 91 ----------------------------QAPAKLRQAQAELEALK------DDNDEETRETLS----------------T 120
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 333 LGAEELQKKLEmsELLLQQFSSQSEASGSNEQL--QQAMEERAQleshvGQLMESlkqlqverdqyaenlkgesamwQQR 410
Cdd:PRK11281 121 LSLRQLESRLA--QTLDQLQNAQNDLAEYNSQLvsLQTQPERAQ-----AALYAN----------------------SQR 171
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 411 VQQMAEQVHALKEEKEQ-RESQVQELEASLAELRSQMEEPPPPEpptgpsEAEERLQgEVEQLQKELEGL-TGQLRAQVQ 488
Cdd:PRK11281 172 LQQIRNLLKGGKVGGKAlRPSQRVLLQAEQALLNAQNDLQRKSL------EGNTQLQ-DLLQKQRDYLTArIQRLEHQLQ 244
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 489 DNESLshLNREqegRLLELEREAQhwseQAEERKQILESMQSDrtTISRALSQNRELKEQLAELQNGFVRLTNENMEIT- 567
Cdd:PRK11281 245 LLQEA--INSK---RLTLSEKTVQ----EAQSQDEAARIQANP--LVAQELEINLQLSQRLLKATEKLNTLTQQNLRVKn 313
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 568 ---SALQSEQHVKKE---------LARKLGELQERLGELKETVELKSQEAQ------GLQEQRDQcLSHLQQYAAAYQQH 629
Cdd:PRK11281 314 wldRLTQSERNIKEQisvlkgsllLSRILYQQQQALPSADLIEGLADRIADlrleqfEINQQRDA-LFQPDAYIDKLEAG 392
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 939108073 630 LTAyEQLTSEKEALHKQLLLQTQLMDQLQHEEVQGKMAA---EMARQELQEAQERLKASSQE 688
Cdd:PRK11281 393 HKS-EVTDEVRDALLQLLDERRELLDQLNKQLNNQLNLAinlQLNQQQLLSVSDSLQSTLTQ 453
|
|
| PRK13861 |
PRK13861 |
type IV secretion system protein VirB9; Provisional |
206-306 |
2.92e-03 |
|
type IV secretion system protein VirB9; Provisional
Pssm-ID: 172382 [Multi-domain] Cd Length: 292 Bit Score: 41.00 E-value: 2.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 206 AKEQGALREQLQVHIQTIGILVSEKAEL----QTALAHTQQAARQKAGESEDLASRLQSSRQRVGELERTLSTVSTQQKQ 281
Cdd:PRK13861 103 ASDAGMRRYVFSISSKTLSHLDKEQPDLyysvQFTYPADDAAARRKEAEQKAVADRLRAEAQYQRRAEDLLDQPATDGGA 182
|
90 100
....*....|....*....|....*.
gi 939108073 282 ADR-YNKDLTKERDALKLELYKNGKS 306
Cdd:PRK13861 183 GDKnWHYVAQGDRSLLPLEVFDNGFS 208
|
|
| COG4995 |
COG4995 |
Uncharacterized conserved protein, contains CHAT domain [Function unknown]; |
210-657 |
3.43e-03 |
|
Uncharacterized conserved protein, contains CHAT domain [Function unknown];
Pssm-ID: 444019 [Multi-domain] Cd Length: 711 Bit Score: 41.49 E-value: 3.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 210 GALREQLQVHIQTIGILVSEKAELQTALAHTQQAARQKAGESEDLASRLQSSRQRVGELERTLSTVSTQQKQADRYNKDL 289
Cdd:COG4995 6 LLALLAALLAALALALLALALLLLLAALAAAALLLLALLALLLALAAAAAAALAAAALALALLAAAALALLLLALALAAL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 290 TKERDALKLELYKNGKSNEDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEMSELLLQQFSSQSEASGSNEQLQQAM 369
Cdd:COG4995 86 ALALLAAALALALAAAALAALALLAALLALAAAAALLALLAALALLALLAALAAALAAAAAAALAAALAAAAAAAAAAAL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 370 EERAQLESHVGQLMESLKQLQVERDQYAENLKGESAMWQQRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQMEEP 449
Cdd:COG4995 166 LALALALAAAALALLALLLAALAAALAAAAAALALLLALLLLAALAAALAAALAALLLALLALAAALLALLLLALLALAA 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 450 PPPEPPTGPSEAEERLQGEVEQLQKELEGLTGQLRAQVQDNESLSHLNREQEGRLLELEREAQHWSEQAEERKQILESMQ 529
Cdd:COG4995 246 AAAALAAAAAALLALAAALLLLAALAALAAAAAAAALAALALAAALALAAAALALALLLAAAAAAALAALALLLLAALLL 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 530 SDRTTISRALSQNRELKEQLAELQNGFVRLTNENMEITSALQSEQHVKKELARKLGELQERLGELKETVELKSQEAQGLQ 609
Cdd:COG4995 326 LLAALALLALLLLLAAAALLAAALAAALALAAALALALLAALLLLLAALLALLLEALLLLLLALLAALLLLAAALLALAA 405
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 939108073 610 EQRDQCLSHLQQYAAAYQQHLTAYEQLTSEKE--ALHKQLLLQTQLMDQL 657
Cdd:COG4995 406 AQLLRLLLAALALLLALAAYAAARLALLALIEyiILPDRLYAFVQLYQLL 455
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
308-599 |
3.54e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.48 E-value: 3.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 308 EDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEMSELLLQQF------SSQSEASGSNEQLQQAMEERAQLESHvGQ 381
Cdd:PRK04863 840 RQLNRRRVELERALADHESQEQQQRSQLEQAKEGLSALNRLLPRLnlladeTLADRVEEIREQLDEAEEAKRFVQQH-GN 918
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 382 LMESLKQ----LQVERDQYAEnLKGESAMWQQRVQQMAEQVHALKEekeqresqvqeleasLAELRSQMEEPPPPEPPTG 457
Cdd:PRK04863 919 ALAQLEPivsvLQSDPEQFEQ-LKQDYQQAQQTQRDAKQQAFALTE---------------VVQRRAHFSYEDAAEMLAK 982
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 458 PSEAEERLQGEVEQLQKELEGLTGQLRAQV----QDNESLSHLN---REQEGRLLELEREAQ----HWSEQAEERkqile 526
Cdd:PRK04863 983 NSDLNEKLRQRLEQAEQERTRAREQLRQAQaqlaQYNQVLASLKssyDAKRQMLQELKQELQdlgvPADSGAEER----- 1057
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 939108073 527 sMQSDRTTISRALSQNRELKEQLaELQNGFVRLTNENmeitsalqseqhvkkeLARKLGELQERLGELKETVE 599
Cdd:PRK04863 1058 -ARARRDELHARLSANRSRRNQL-EKQLTFCEAEMDN----------------LTKKLRKLERDYHEMREQVV 1112
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
411-778 |
5.45e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 40.82 E-value: 5.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 411 VQQMAEQVHALKEEKEQRESQVQELEASLAELRSQMeeppppepptgpseaeERLQGEVEQLQKELEgltgqLRAQVQDN 490
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQL----------------ERLRREREKAERYQA-----LLKEKREY 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 491 ESLSHLNReqegrLLELEREaqhwseqaeerkqiLESMQSDRTTISRALSQNRELKEQLAELQNGFVRLTNENMEITSAL 570
Cdd:TIGR02169 224 EGYELLKE-----KEALERQ--------------KEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDL 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 571 QSEQHVkkELARKLGELQERLGELKETVELKSQEAQGLQEQRdqclshlqqyaaayQQHLTAYEQLTSEKEALHKQLLLQ 650
Cdd:TIGR02169 285 GEEEQL--RVKEKIGELEAEIASLERSIAEKERELEDAEERL--------------AKLEAEIDKLLAEIEELEREIEEE 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 651 TQLMDQLQHEEVQGKMAAEMARQELQEAQERLKASSQENQQLQAQLsllvlpgeDMDQEEQDEEVPQPSLTIpEDLVSRE 730
Cdd:TIGR02169 349 RKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKL--------EKLKREINELKRELDRLQ-EELQRLS 419
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 939108073 731 AMVAFCNAAIARAEEEQARLRVQLREQKARCRSLAHLAAPVQSKLEKE 778
Cdd:TIGR02169 420 EELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKY 467
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
113-386 |
5.56e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 40.81 E-value: 5.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 113 EETKTFSSTESLRQLSQQL---NGLVSESTSYINGEGLTSSNMKELESRYQELAVALDSSYVTNKQLsstiEELKQQNQD 189
Cdd:PRK10929 128 EQDRAREISDSLSQLPQQQteaRRQLNEIERRLQTLGTPNTPLAQAQLTALQAESAALKALVDELEL----AQLSANNRQ 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 190 TLDQLEKE--KKDYQQKLAKEQgALREQLQVHIQtigilvsEKAELqtALAHTQQAARQKAGESEDLASRLQSSRQRVGE 267
Cdd:PRK10929 204 ELARLRSElaKKRSQQLDAYLQ-ALRNQLNSQRQ-------REAER--ALESTELLAEQSGDLPKSIVAQFKINRELSQA 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 268 LE---RTLSTVSTQQKQADRYNKDLTKERDALKLELYKNGKSN---EDLRQQNSELEEKLRVLVAEKAAAQLGAeelqKK 341
Cdd:PRK10929 274 LNqqaQRMDLIASQQRQAASQTLQVRQALNTLREQSQWLGVSNalgEALRAQVARLPEMPKPQQLDTEMAQLRV----QR 349
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 939108073 342 LEMSELL--LQQFSSQSEASGSNEQLQQAMEERAQLESHvGQLMESL 386
Cdd:PRK10929 350 LRYEDLLnkQPQLRQIRQADGQPLTAEQNRILDAQLRTQ-RELLNSL 395
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
357-613 |
6.24e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 40.54 E-value: 6.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 357 EASGSNEQLQQAMEERAQLESHVGQLMESLKQLQVERDQYAENLKGESAMW------------------------QQRVQ 412
Cdd:pfam01576 6 EMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCaeaeemrarlaarkqeleeilhelESRLE 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 413 QMAEQVHALKEEKEQRESQVQELEASLAELRSQMEEPPPPEPPTGP------------SEAEERLQGEVEQLQKELEGLT 480
Cdd:pfam01576 86 EEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAkikkleedilllEDQNSKLSKERKLLEERISEFT 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 481 GQLRAQVQDNESLSHLNREQEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISralSQNRELKEQLAELQNGFVRLT 560
Cdd:pfam01576 166 SNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQ---EQIAELQAQIAELRAQLAKKE 242
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 939108073 561 NENMEITSALQSEQHVKKELARKLGELQERLGELKETVEL-KSQEAQGLQEQRD 613
Cdd:pfam01576 243 EELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESeRAARNKAEKQRRD 296
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
117-331 |
6.44e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.13 E-value: 6.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 117 TFSSTESLRQLSQQLNGLVSESTSYINGEGLTSSNMKELESRYQELAVALDSsyvTNKQLSSTIEELKQQNQDtLDQLEK 196
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAA---LARRIRALEQELAALEAE-LAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 197 EKKDYQQKLAKEQGALREQLQ--------------VHIQTIGILVSEKAELQTALAHTQQAARQKAGESEDLASRLQSSR 262
Cdd:COG4942 91 EIAELRAELEAQKEELAELLRalyrlgrqpplallLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 939108073 263 QRVGELERTLSTVSTQQKQADRYNKDLTKERDALKLELYKNGKSNEDLRQQNSELEEKLRVLVAEKAAA 331
Cdd:COG4942 171 AERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
188-894 |
9.46e-03 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 40.03 E-value: 9.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 188 QDTLDQLEKEKKDYQQKLAKEQGALREQLQVHIQTIGILVSEKAELQTalahTQQAARQKAGESEDLASRL---QSSRQR 264
Cdd:TIGR00606 188 LETLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLES----SREIVKSYENELDPLKNRLkeiEHNLSK 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 265 VGELERTLSTVSTQQKQADRYNKDLTKER-------DALKLELYKNGKSN---------------EDLRQQNSELEEKLR 322
Cdd:TIGR00606 264 IMKLDNEIKALKSRKKQMEKDNSELELKMekvfqgtDEQLNDLYHNHQRTvrekerelvdcqrelEKLNKERRLLNQEKT 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 323 VLVAEKAAAQLGAEELQKKLEMSELLLQQFSSQSEASG------SNEQLQQAME---ERAQLESH-VGQLMESLKQLQVE 392
Cdd:TIGR00606 344 ELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGfergpfSERQIKNFHTlviERQEDEAKtAAQLCADLQSKERL 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 393 RDQYAENLKGESAMWQQRVQQMAEQVHALKEEKEQRESQVQELEAS---LAELRSQMEEPPPPEPPTGPSEAEERLQGEV 469
Cdd:TIGR00606 424 KQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSsdrILELDQELRKAERELSKAEKNSLTETLKKEV 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 470 EQLQKELEGLTGQLRAQVQDNESLSHlNREQEGRLLELEREAQHWSEQAEERK----QILESMQSD---RTTISRALSQN 542
Cdd:TIGR00606 504 KSLQNEKADLDRKLRKLDQEMEQLNH-HTTTRTQMEMLTKDKMDKDEQIRKIKsrhsDELTSLLGYfpnKKQLEDWLHSK 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 543 RELKEQLAElqngfvRLTNENMEITSALQSEQHVKKELARKLGELQERLGELKETVELKSQEA--QGLQEQRDQCLSHLQ 620
Cdd:TIGR00606 583 SKEINQTRD------RLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEESdlERLKEEIEKSSKQRA 656
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 621 QYAAAYQQHLTAYEQLTSEKEALHKQLLLQTQLMDQLQHEEVQGKMAAEMARQELQEAQERLKASSQENQQLQAQLSLLV 700
Cdd:TIGR00606 657 MLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQ 736
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 701 LPGEDMDQE-----EQDEEVPQPSLTIPEDLVSREAMVAFCNAAIARAEEEQARLRVQLR---EQKARCRSLAHLAAPVQ 772
Cdd:TIGR00606 737 SIIDLKEKEipelrNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERfqmELKDVERKIAQQAAKLQ 816
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 773 SklekeavvprdmgdSVSEESNQALHVAMEKLQNRFLEVMQEKVELKERVEELEHCCIQLSGETDTigeyialyqnqrav 852
Cdd:TIGR00606 817 G--------------SDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNE-------------- 868
|
730 740 750 760
....*....|....*....|....*....|....*....|..
gi 939108073 853 LKARHLEKEEYISRLAQDKEEMKVKLLELQELVLRLVNERNE 894
Cdd:TIGR00606 869 LKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQ 910
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
266-883 |
9.68e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 40.12 E-value: 9.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 266 GELERTLSTVSTQQKQADRYNKDLTKERDALKLELYKN--GKSNEDLRQQNSELEEKLRVLVAEKAAAQL-GAEELQKKL 342
Cdd:PTZ00121 1058 GKAEAKAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEafGKAEEAKKTETGKAEEARKAEEAKKKAEDArKAEEARKAE 1137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 343 EMSELLLQQFSSQSEASGSNEQLQQAME-ERAQLESHVGQLMESLKQLQVERdqyAENLKGESAMWQQRVQQMAEQVHAL 421
Cdd:PTZ00121 1138 DARKAEEARKAEDAKRVEIARKAEDARKaEEARKAEDAKKAEAARKAEEVRK---AEELRKAEDARKAEAARKAEEERKA 1214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 422 KEEKEQRESQVQELEASLAELRSQMEEPPPPEPPTGPSEAEERLQGEVEQLQKELEGLTGQLRAQVQDNESLSHLNREQE 501
Cdd:PTZ00121 1215 EEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADE 1294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 502 GRLLELEREAQHWSEQAEERKQILESMQSDRTTISRA--LSQNRELKEQLAELQNGFVRLTNENMEITSALQSEQHVKKE 579
Cdd:PTZ00121 1295 AKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKAdaAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKE 1374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 580 LARKLGELQERLGELKEtvelKSQEAQGLQEQRDQCLSHLQQYAAAYQQHltayEQLTSEKEALHKQLLLQTQLMDQLQH 659
Cdd:PTZ00121 1375 EAKKKADAAKKKAEEKK----KADEAKKKAEEDKKKADELKKAAAAKKKA----DEAKKKAEEKKKADEAKKKAEEAKKA 1446
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 660 EEVQGKM----AAEMARQELQEAQ--ERLKASSQENQQLQAQLSLLVLPGEDMDQEEQDEEVPQPSLTIPEDLVSREAMV 733
Cdd:PTZ00121 1447 DEAKKKAeeakKAEEAKKKAEEAKkaDEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADE 1526
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939108073 734 AFCNAAIARAEEEQARLRVQLREQKARCRSLAHLAAPVQSKLEKEAVVPRDMGDSVSEESNQALHVAMEKLQNRFLEVMQ 813
Cdd:PTZ00121 1527 AKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKK 1606
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 939108073 814 EKVELKERVEELEHCCIQLSGETDTIGEYIALYQNQ-RAVLKARHLEKEEYISR-----LAQDKEEMKVKLLELQE 883
Cdd:PTZ00121 1607 MKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEaEEKKKAEELKKAEEENKikaaeEAKKAEEDKKKAEEAKK 1682
|
|
| |
