RecName: Full=B-cell receptor-associated protein 29; Short=BCR-associated protein 29; Short=Bap29
List of domain hits
Name | Accession | Description | Interval | E-value | |||
Bap31 | pfam05529 | Bap31/Bap29 transmembrane region; Bap31 is a polytopic integral protein of the endoplasmic ... |
1-129 | 1.27e-48 | |||
Bap31/Bap29 transmembrane region; Bap31 is a polytopic integral protein of the endoplasmic reticulum membrane and a substrate of caspase-8. Bap31 is cleaved within its cytosolic domain, generating pro-apoptotic p20 Bap31. This family also contains the Bap29 protein that forms a heterodimer with Bap 31. : Pssm-ID: 461673 Cd Length: 137 Bit Score: 156.50 E-value: 1.27e-48
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Bap31_Bap29_C | pfam18035 | Bap31/Bap29 cytoplasmic coiled-coil domain; Bap31 is a polytopic integral protein of the ... |
184-237 | 1.48e-08 | |||
Bap31/Bap29 cytoplasmic coiled-coil domain; Bap31 is a polytopic integral protein of the endoplasmic reticulum membrane and a substrate of caspase-8. Bap31 is cleaved within its cytosolic domain, generating pro-apoptotic p20 Bap31. This entry represents the cytoplasmic domain which forms a heterodimeric coiled-coil with Bap29. This Bap29 and Bap31 are homologous to each other and this entry includes both proteins. : Pssm-ID: 465623 [Multi-domain] Cd Length: 52 Bit Score: 49.58 E-value: 1.48e-08
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PLN03188 super family | cl33656 | kinesin-12 family protein; Provisional |
124-225 | 8.90e-03 | |||
kinesin-12 family protein; Provisional The actual alignment was detected with superfamily member PLN03188: Pssm-ID: 215621 [Multi-domain] Cd Length: 1320 Bit Score: 37.22 E-value: 8.90e-03
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Name | Accession | Description | Interval | E-value | |||
Bap31 | pfam05529 | Bap31/Bap29 transmembrane region; Bap31 is a polytopic integral protein of the endoplasmic ... |
1-129 | 1.27e-48 | |||
Bap31/Bap29 transmembrane region; Bap31 is a polytopic integral protein of the endoplasmic reticulum membrane and a substrate of caspase-8. Bap31 is cleaved within its cytosolic domain, generating pro-apoptotic p20 Bap31. This family also contains the Bap29 protein that forms a heterodimer with Bap 31. Pssm-ID: 461673 Cd Length: 137 Bit Score: 156.50 E-value: 1.27e-48
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Bap31_Bap29_C | pfam18035 | Bap31/Bap29 cytoplasmic coiled-coil domain; Bap31 is a polytopic integral protein of the ... |
184-237 | 1.48e-08 | |||
Bap31/Bap29 cytoplasmic coiled-coil domain; Bap31 is a polytopic integral protein of the endoplasmic reticulum membrane and a substrate of caspase-8. Bap31 is cleaved within its cytosolic domain, generating pro-apoptotic p20 Bap31. This entry represents the cytoplasmic domain which forms a heterodimeric coiled-coil with Bap29. This Bap29 and Bap31 are homologous to each other and this entry includes both proteins. Pssm-ID: 465623 [Multi-domain] Cd Length: 52 Bit Score: 49.58 E-value: 1.48e-08
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SMC_prok_B | TIGR02168 | chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
117-238 | 8.08e-03 | |||
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins] Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 37.34 E-value: 8.08e-03
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PLN03188 | PLN03188 | kinesin-12 family protein; Provisional |
124-225 | 8.90e-03 | |||
kinesin-12 family protein; Provisional Pssm-ID: 215621 [Multi-domain] Cd Length: 1320 Bit Score: 37.22 E-value: 8.90e-03
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Name | Accession | Description | Interval | E-value | |||
Bap31 | pfam05529 | Bap31/Bap29 transmembrane region; Bap31 is a polytopic integral protein of the endoplasmic ... |
1-129 | 1.27e-48 | |||
Bap31/Bap29 transmembrane region; Bap31 is a polytopic integral protein of the endoplasmic reticulum membrane and a substrate of caspase-8. Bap31 is cleaved within its cytosolic domain, generating pro-apoptotic p20 Bap31. This family also contains the Bap29 protein that forms a heterodimer with Bap 31. Pssm-ID: 461673 Cd Length: 137 Bit Score: 156.50 E-value: 1.27e-48
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Bap31_Bap29_C | pfam18035 | Bap31/Bap29 cytoplasmic coiled-coil domain; Bap31 is a polytopic integral protein of the ... |
184-237 | 1.48e-08 | |||
Bap31/Bap29 cytoplasmic coiled-coil domain; Bap31 is a polytopic integral protein of the endoplasmic reticulum membrane and a substrate of caspase-8. Bap31 is cleaved within its cytosolic domain, generating pro-apoptotic p20 Bap31. This entry represents the cytoplasmic domain which forms a heterodimeric coiled-coil with Bap29. This Bap29 and Bap31 are homologous to each other and this entry includes both proteins. Pssm-ID: 465623 [Multi-domain] Cd Length: 52 Bit Score: 49.58 E-value: 1.48e-08
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SCP-1 | pfam05483 | Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
118-238 | 8.25e-05 | |||
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase. Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 43.17 E-value: 8.25e-05
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SMC_prok_B | TIGR02168 | chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
117-238 | 8.08e-03 | |||
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins] Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 37.34 E-value: 8.08e-03
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PLN03188 | PLN03188 | kinesin-12 family protein; Provisional |
124-225 | 8.90e-03 | |||
kinesin-12 family protein; Provisional Pssm-ID: 215621 [Multi-domain] Cd Length: 1320 Bit Score: 37.22 E-value: 8.90e-03
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Blast search parameters | ||||
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