|
Name |
Accession |
Description |
Interval |
E-value |
| JAKMIP_CC3 |
pfam16034 |
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ... |
415-605 |
1.28e-69 |
|
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain] Cd Length: 199 Bit Score: 224.37 E-value: 1.28e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 415 ERERLLRSKRHRGKSLKPPKKH-VVETFFGFDEE-SVDSETlSETSYNTDRTDRTPATPEEDLDETTTREEADLRFCQLT 492
Cdd:pfam16034 1 ERDKLIRARKQRRKEKKKKLRDmVVETFFGYDEEaSVDSET-SSLSYNTDRTDSTPATPDEDLDEGVAAEEAELRFRQLT 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 493 REYQALQRAYALLQEQVGGTLDAEREARTREQLQADLLRCQAKIEDLEKLLVEKGQDAAWVEEKQVLMRTNQDLLEKIYR 572
Cdd:pfam16034 80 REYQALQRAYALLQEQSGGTLDAEREAKTREQLQAELRRAQSRIEDLESALAQKGQDSKWVEEKQALIRRNQELVEKIRI 159
|
170 180 190
....*....|....*....|....*....|...
gi 123780845 573 LEMEENQLKSEMQDAKDQNELLEFRVLELEVRD 605
Cdd:pfam16034 160 MEQEEGRLKNEIQDARDQNELLEFRILELEERE 192
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
24-607 |
4.61e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 66.11 E-value: 4.61e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 24 EELRAKLTNIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRHTAYISELKAKLHEEKTKELQALREALiRQHEQEAARTA 103
Cdd:COG1196 223 KELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEE-YELLAELARLE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 104 KIKEGELQRLQAtlnvlrdgaadkvktalLADAREEARRTFDGERQRLQQEILELKAARKQAEEAlsncmQADKAKAADL 183
Cdd:COG1196 302 QDIARLEERRRE-----------------LEERLEELEEELAELEEELEELEEELEELEEELEEA-----EEELEEAEAE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 184 RAAYQAHQDEVHRIKRECERDIRRLMDEIKGKERVILALEKELGVQAGQTQRLLLQKEALDEQLVQVKEAERHHSSPKRE 263
Cdd:COG1196 360 LAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEE 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 264 LppgigdmaelmggqdqHMDERDVRRFQLKIAELNSVIRKLEDRNTLLADERNELLKRSRETEVQLKPLVEKNKRMNKKN 343
Cdd:COG1196 440 E----------------EEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADY 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 344 EDLLHSIQRMEEKLK--------SLTRENVEMKEKLSAQASLKRHTSLNDLSLTRDEQEIEFLRLQVLEQQHVIDDLSLE 415
Cdd:COG1196 504 EGFLEGVKAALLLAGlrglagavAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIR 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 416 RERLLRSKRHRGKSLKPPKKHVVETFFGFDEESVDSETLSETSYNTDRTDRtpatpeedldETTTREEADLRFCQLTREY 495
Cdd:COG1196 584 ARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEA----------ALRRAVTLAGRLREVTLEG 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 496 QALQRAYALLQEQVGGTLDAEREARTREQLQADLLRCQAKIEDLEKLLVEKGQDAAWVEEKQVLMRTNQDLLEKIYRLEM 575
Cdd:COG1196 654 EGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAE 733
|
570 580 590
....*....|....*....|....*....|..
gi 123780845 576 EENQLKSEMQDAKDQNELLEFRVLELEVRDSI 607
Cdd:COG1196 734 REELLEELLEEEELLEEEALEELPEPPDLEEL 765
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
6-363 |
5.43e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 56.23 E-value: 5.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 6 RSKGEKPETETDSVQMANEELRAKLTNIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRHTAYISELKaklheEKTKELQ 85
Cdd:TIGR02169 694 QSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELK-----ELEARIE 768
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 86 ALREALIRQHEQEAARTAKIKEGELQRLQATLNVLRDGAADKVKTALLADAREEAR----RTFDGERQRLQQEILELKAA 161
Cdd:TIGR02169 769 ELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLtlekEYLEKEIQELQEQRIDLKEQ 848
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 162 RKQAEEALSNcMQADKAKAADLRAAYQAHQDEVHRIKRECERDIRRLMDEIKGKERVILALEKELGVQAGQTQRLLLQKE 241
Cdd:TIGR02169 849 IKSIEKEIEN-LNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLE 927
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 242 ALDEQLVQVKEAERHHSSPKRELPpgigdmaelmggqdqhmderDVRRFQLKIAELNSVIRKLEDRNTLLADERNELLKR 321
Cdd:TIGR02169 928 ALEEELSEIEDPKGEDEEIPEEEL--------------------SLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKR 987
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 123780845 322 sretevqLKPLVEKNKRMNKKNEDLLHSIQRMEEKLKSLTRE 363
Cdd:TIGR02169 988 -------LDELKEKRAKLEEERKAILERIEEYEKKKREVFME 1022
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
38-246 |
6.98e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 49.37 E-value: 6.98e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 38 QQEKSKVGKLRERLQEAKLEREQEQRRHTAYISELKAKLHEEKTKELQALREALIRQHEQEAARTAKIKEGELQRLQATL 117
Cdd:PTZ00121 1571 KAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAE 1650
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 118 NVLRDGAADKVKTALLADAREEARRTFDGERQRLQQEILELKAARKQAEEA-----LSNCMQADKAKAADLRAAYQAHQD 192
Cdd:PTZ00121 1651 ELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAkkaeeLKKKEAEEKKKAEELKKAEEENKI 1730
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 123780845 193 EVHRIKRECERDIRRL----MDEIKGKERVILALEKELGVQAGQTQRLLLQKEALDEQ 246
Cdd:PTZ00121 1731 KAEEAKKEAEEDKKKAeeakKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEE 1788
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
8-225 |
5.34e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 39.72 E-value: 5.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 8 KGEKPETETDSVQMANEELRaKLTNIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRhtayISELKAKLHEEKTKELQAL 87
Cdd:pfam17380 359 KRELERIRQEEIAMEISRMR-ELERLQMERQQKNERVRQELEAARKVKILEEERQRK----IQQQKVEMEQIRAEQEEAR 433
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 88 REALIRQHEQEAARTAKIKEGELQRlQATLNVLRDGAADKVKTALLADAREEARRTFDGERQR-LQQEILELKAA---RK 163
Cdd:pfam17380 434 QREVRRLEEERAREMERVRLEEQER-QQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKiLEKELEERKQAmieEE 512
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 123780845 164 QAEEALSNCMQADKAKAADLRAAYQAHQDEVHRIKRECERDIRRLMDEIKGKERVILALEKE 225
Cdd:pfam17380 513 RKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMERE 574
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| JAKMIP_CC3 |
pfam16034 |
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ... |
415-605 |
1.28e-69 |
|
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain] Cd Length: 199 Bit Score: 224.37 E-value: 1.28e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 415 ERERLLRSKRHRGKSLKPPKKH-VVETFFGFDEE-SVDSETlSETSYNTDRTDRTPATPEEDLDETTTREEADLRFCQLT 492
Cdd:pfam16034 1 ERDKLIRARKQRRKEKKKKLRDmVVETFFGYDEEaSVDSET-SSLSYNTDRTDSTPATPDEDLDEGVAAEEAELRFRQLT 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 493 REYQALQRAYALLQEQVGGTLDAEREARTREQLQADLLRCQAKIEDLEKLLVEKGQDAAWVEEKQVLMRTNQDLLEKIYR 572
Cdd:pfam16034 80 REYQALQRAYALLQEQSGGTLDAEREAKTREQLQAELRRAQSRIEDLESALAQKGQDSKWVEEKQALIRRNQELVEKIRI 159
|
170 180 190
....*....|....*....|....*....|...
gi 123780845 573 LEMEENQLKSEMQDAKDQNELLEFRVLELEVRD 605
Cdd:pfam16034 160 MEQEEGRLKNEIQDARDQNELLEFRILELEERE 192
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
24-607 |
4.61e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 66.11 E-value: 4.61e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 24 EELRAKLTNIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRHTAYISELKAKLHEEKTKELQALREALiRQHEQEAARTA 103
Cdd:COG1196 223 KELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEE-YELLAELARLE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 104 KIKEGELQRLQAtlnvlrdgaadkvktalLADAREEARRTFDGERQRLQQEILELKAARKQAEEAlsncmQADKAKAADL 183
Cdd:COG1196 302 QDIARLEERRRE-----------------LEERLEELEEELAELEEELEELEEELEELEEELEEA-----EEELEEAEAE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 184 RAAYQAHQDEVHRIKRECERDIRRLMDEIKGKERVILALEKELGVQAGQTQRLLLQKEALDEQLVQVKEAERHHSSPKRE 263
Cdd:COG1196 360 LAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEE 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 264 LppgigdmaelmggqdqHMDERDVRRFQLKIAELNSVIRKLEDRNTLLADERNELLKRSRETEVQLKPLVEKNKRMNKKN 343
Cdd:COG1196 440 E----------------EEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADY 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 344 EDLLHSIQRMEEKLK--------SLTRENVEMKEKLSAQASLKRHTSLNDLSLTRDEQEIEFLRLQVLEQQHVIDDLSLE 415
Cdd:COG1196 504 EGFLEGVKAALLLAGlrglagavAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIR 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 416 RERLLRSKRHRGKSLKPPKKHVVETFFGFDEESVDSETLSETSYNTDRTDRtpatpeedldETTTREEADLRFCQLTREY 495
Cdd:COG1196 584 ARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEA----------ALRRAVTLAGRLREVTLEG 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 496 QALQRAYALLQEQVGGTLDAEREARTREQLQADLLRCQAKIEDLEKLLVEKGQDAAWVEEKQVLMRTNQDLLEKIYRLEM 575
Cdd:COG1196 654 EGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAE 733
|
570 580 590
....*....|....*....|....*....|..
gi 123780845 576 EENQLKSEMQDAKDQNELLEFRVLELEVRDSI 607
Cdd:COG1196 734 REELLEELLEEEELLEEEALEELPEPPDLEEL 765
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
13-541 |
2.30e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 63.80 E-value: 2.30e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 13 ETETDSVQMANEELRAKLTNIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRHTAYISELK--AKLHEEKTKELQALREA 90
Cdd:COG1196 266 EAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAelEEELEELEEELEELEEE 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 91 LIRQHEQEAARTAKIK--EGELQRLQATLNVLRDGAADKVKTALLADAREEARRTFDGERQRLQQEILELKAARKQAEEA 168
Cdd:COG1196 346 LEEAEEELEEAEAELAeaEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEE 425
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 169 LSNCMQADKAKAADLRAAYQAHQDEVHRIKRECERDIRRLMDEIKGKERVILALEKELGVQAGQTQRLLLQKEALDEQLV 248
Cdd:COG1196 426 LEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEG 505
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 249 QVKEAERHHSSPKRELPPGIGDMAelmggqdqhmDERDVRRFQLKIAELNSVIRKLEDRNTLLADERNELLKRSRETEVQ 328
Cdd:COG1196 506 FLEGVKAALLLAGLRGLAGAVAVL----------IGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRAT 575
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 329 LKPLvekNKRMNKKNEDLLHSIQRMEEKLKSLTRENVEMKEKLSAQASLKRHTSLNDLSLTRDEQEIEFLRLQVLEQQHV 408
Cdd:COG1196 576 FLPL---DKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLE 652
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 409 IDDLSLERERLLRSKRHRGKSLKPPKKHVVEtffgFDEESVDSETLSETSYNTDRTDRTPATPEEDLDETTTREEADLRF 488
Cdd:COG1196 653 GEGGSAGGSLTGGSRRELLAALLEAEAELEE----LAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEE 728
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 123780845 489 CQLTREYQALQRAYALLQEQVGGTLDAEREARTREQLQADLLRCQAKIEDLEK 541
Cdd:COG1196 729 QLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGP 781
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
24-580 |
4.56e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.48 E-value: 4.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 24 EELRAKLTNIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRHTAYISELKAKLHE-EKTKELQALREALIRQHEQEAART 102
Cdd:COG1196 242 EELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAElARLEQDIARLEERRRELEERLEEL 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 103 AKIKEGELQRLQATLNVLRDGAADKVKTALLADAREEARRTFDGERQRLQQEILELKAARKQAEEALSNCMQADKAKAAD 182
Cdd:COG1196 322 EEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQ 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 183 LRAAYQAHQDEVHRIKREcERDIRRLMDEIKGKERVILALEKELGVQAGQTQRLLLQKEALDEQLVQVKEAERHhsspkr 262
Cdd:COG1196 402 LEELEEAEEALLERLERL-EEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAAL------ 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 263 elppgigdmAELMGGQDQHMDERDVRRFQLKIAELNS------VIRKLEDRNTLLADERNELLKRSRETEVQLKPLVEKN 336
Cdd:COG1196 475 ---------LEAALAELLEELAEAAARLLLLLEAEADyegfleGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALA 545
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 337 KRMNKKNEDLLHSIQRMEEKLKSLTRENVEMKEKLSAQASLKRHTSLNDLSLTRDEQEIEFLRLQVLEQQHVIDDLSLER 416
Cdd:COG1196 546 AALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGR 625
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 417 ERLLRSKRHRGKSLkppkkhvVETFFGFDEESVDSETLSEtsyntdRTDRTPATPEEDLDETTTREEADLRFCQLTREYQ 496
Cdd:COG1196 626 TLVAARLEAALRRA-------VTLAGRLREVTLEGEGGSA------GGSLTGGSRRELLAALLEAEAELEELAERLAEEE 692
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 497 ALQRAYALLQEQVGGTLDAEREARTREQLQADLLRCQAKIED---LEKLLVEKGQDAAWVEEKQVLMRTNQDLLEKIYRL 573
Cdd:COG1196 693 LELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEReelLEELLEEEELLEEEALEELPEPPDLEELERELERL 772
|
....*..
gi 123780845 574 EMEENQL 580
Cdd:COG1196 773 EREIEAL 779
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
6-363 |
5.43e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 56.23 E-value: 5.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 6 RSKGEKPETETDSVQMANEELRAKLTNIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRHTAYISELKaklheEKTKELQ 85
Cdd:TIGR02169 694 QSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELK-----ELEARIE 768
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 86 ALREALIRQHEQEAARTAKIKEGELQRLQATLNVLRDGAADKVKTALLADAREEAR----RTFDGERQRLQQEILELKAA 161
Cdd:TIGR02169 769 ELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLtlekEYLEKEIQELQEQRIDLKEQ 848
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 162 RKQAEEALSNcMQADKAKAADLRAAYQAHQDEVHRIKRECERDIRRLMDEIKGKERVILALEKELGVQAGQTQRLLLQKE 241
Cdd:TIGR02169 849 IKSIEKEIEN-LNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLE 927
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 242 ALDEQLVQVKEAERHHSSPKRELPpgigdmaelmggqdqhmderDVRRFQLKIAELNSVIRKLEDRNTLLADERNELLKR 321
Cdd:TIGR02169 928 ALEEELSEIEDPKGEDEEIPEEEL--------------------SLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKR 987
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 123780845 322 sretevqLKPLVEKNKRMNKKNEDLLHSIQRMEEKLKSLTRE 363
Cdd:TIGR02169 988 -------LDELKEKRAKLEEERKAILERIEEYEKKKREVFME 1022
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
38-246 |
6.98e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 49.37 E-value: 6.98e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 38 QQEKSKVGKLRERLQEAKLEREQEQRRHTAYISELKAKLHEEKTKELQALREALIRQHEQEAARTAKIKEGELQRLQATL 117
Cdd:PTZ00121 1571 KAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAE 1650
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 118 NVLRDGAADKVKTALLADAREEARRTFDGERQRLQQEILELKAARKQAEEA-----LSNCMQADKAKAADLRAAYQAHQD 192
Cdd:PTZ00121 1651 ELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAkkaeeLKKKEAEEKKKAEELKKAEEENKI 1730
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 123780845 193 EVHRIKRECERDIRRL----MDEIKGKERVILALEKELGVQAGQTQRLLLQKEALDEQ 246
Cdd:PTZ00121 1731 KAEEAKKEAEEDKKKAeeakKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEE 1788
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
22-255 |
1.02e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.22 E-value: 1.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 22 ANEELRAKLTNIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRhtayISELKAKLHEekTKELQALREALIRQHEQEAAR 101
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERR----IAALARRIRA--LEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 102 TAKIKEGELQRLQATLNVL-RDGAADKVKTALLADAREEARRtfdgeRQRLQQEILElkAARKQAEEalsncMQADKAKA 180
Cdd:COG4942 95 LRAELEAQKEELAELLRALyRLGRQPPLALLLSPEDFLDAVR-----RLQYLKYLAP--ARREQAEE-----LRADLAEL 162
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 123780845 181 ADLRAAYQAHQDEVHRIKRECERDIRRLMDEIKGKERVILALEKELGVQAGQTQRLLLQKEALDEQLVQVKEAER 255
Cdd:COG4942 163 AALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
13-246 |
2.10e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 47.74 E-value: 2.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 13 ETETDSVQMANEELRAKLTNIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRHTAYISEL-----KAKLHEEKTKELQAL 87
Cdd:TIGR02168 711 EEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLeeaeeELAEAEAEIEELEAQ 790
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 88 REALIRQHEQEaARTAKIKEGELQRLQATLNVLRDGAADKVKTAllADAREEARRTfDGERQRLQQEILELKAARKQAEE 167
Cdd:TIGR02168 791 IEQLKEELKAL-REALDELRAELTLLNEEAANLRERLESLERRI--AATERRLEDL-EEQIEELSEDIESLAAEIEELEE 866
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 168 ALSNcMQADKAKAADLRAAYQAHQDEVHRIKRECERDIRRLMDEIKGKERVILALEKELG----VQAGQTQRLLLQKEAL 243
Cdd:TIGR02168 867 LIEE-LESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAqlelRLEGLEVRIDNLQERL 945
|
...
gi 123780845 244 DEQ 246
Cdd:TIGR02168 946 SEE 948
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
27-213 |
1.17e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.29 E-value: 1.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 27 RAKLTNIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRHTAYISELKAKLHEEKTKELQALREALIRQHEQEAARTAKIK 106
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREIAELEAELERLDASSDDLA 688
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 107 --EGELQRLQATLNVLRDGAAD-KVKTALLADAREEARRTFDGERQRLQQ-EILELKAARKQAEEALSNcmQADKAKAAD 182
Cdd:COG4913 689 alEEQLEELEAELEELEEELDElKGEIGRLEKELEQAEEELDELQDRLEAaEDLARLELRALLEERFAA--ALGDAVERE 766
|
170 180 190
....*....|....*....|....*....|.
gi 123780845 183 LRAAYQAHQDEVHRIKRECERDIRRLMDEIK 213
Cdd:COG4913 767 LRENLEERIDALRARLNRAEEELERAMRAFN 797
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
23-246 |
2.59e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 44.24 E-value: 2.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 23 NEELRAKLTNIQIEFQQEKskVGKLRERLQEAKLEREQEQRRHTAYISELKAKLHEEKTKELQALREALIRQHEQEAART 102
Cdd:COG3206 165 NLELRREEARKALEFLEEQ--LPELRKELEEAEAALEEFRQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 103 AKIKEGELQRLQATLNVLRDGAADKVKTALLADAREEARrtfdgERQRLQQEILELKAARKQAEEALSNCMQADKAKAAD 182
Cdd:COG3206 243 AALRAQLGSGPDALPELLQSPVIQQLRAQLAELEAELAE-----LSARYTPNHPDVIALRAQIAALRAQLQQEAQRILAS 317
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 123780845 183 LRAAYQAHQDEVHRIKREcERDIRRLMDEIKGKERVILALEKELGVQAGQTQRLLLQKEALDEQ 246
Cdd:COG3206 318 LEAELEALQAREASLQAQ-LAQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEARLA 380
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
25-362 |
3.98e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 43.51 E-value: 3.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 25 ELRAKLTNIQIEFQ--QEKSKVGKLrERLQEAKLEREQEQRRHTAYISELKAKLhEEKTKELQALREalirqheqeaart 102
Cdd:TIGR02168 217 ELKAELRELELALLvlRLEELREEL-EELQEELKEAEEELEELTAELQELEEKL-EELRLEVSELEE------------- 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 103 akikegELQRLQATLNVLRDGAADKVKTALLADAREEARRTfdgERQRLQQEILELKAARKQAEEALsNCMQADKAKAAD 182
Cdd:TIGR02168 282 ------EIEELQKELYALANEISRLEQQKQILRERLANLER---QLEELEAQLEELESKLDELAEEL-AELEEKLEELKE 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 183 LRAAYQAHQDEVHRIKRECERDIRRLMDEIKGKERVILALEKELGVQAGQTQRLLLQKEALDEQLVQVKEAERhhsspkr 262
Cdd:TIGR02168 352 ELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIE------- 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 263 elppgigdmaelmgGQDQHMDERDVRRFQLKIAELNSVIRKLEDRNTLLADERNELLKRSRETEVQLKPLVEKNKRMNKK 342
Cdd:TIGR02168 425 --------------ELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQAR 490
|
330 340
....*....|....*....|
gi 123780845 343 nedlLHSIQRMEEKLKSLTR 362
Cdd:TIGR02168 491 ----LDSLERLQENLEGFSE 506
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
22-169 |
4.52e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.37 E-value: 4.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 22 ANEELRAKLT--NIQIEFQQEKSKVGKLRE---RLQEAKLEREQEQRRHTAYISELKAKLHEEKTKELQALrEALIRQHE 96
Cdd:COG4913 273 ELEYLRAALRlwFAQRRLELLEAELEELRAelaRLEAELERLEARLDALREELDELEAQIRGNGGDRLEQL-EREIERLE 351
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 123780845 97 QEAARtakiKEGELQRLQATLNVLrdGAADKVKTALLADAREEARR---TFDGERQRLQQEILELKAARKQAEEAL 169
Cdd:COG4913 352 RELEE----RERRRARLEALLAAL--GLPLPASAEEFAALRAEAAAlleALEEELEALEEALAEAEAALRDLRREL 421
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
297-428 |
4.87e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 43.31 E-value: 4.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 297 LNSVIRKLEDRntLLADERNELLKRSRETEVQLKPLVEKNKRMNKKNEDLLHSIQRMEEKLKSLTRENVEMKEKLSAQAS 376
Cdd:COG2433 378 IEEALEELIEK--ELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERIERLERELSEARS 455
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 123780845 377 LKRHTSLNDLSLTRDEQEIEFLRLQVLEQQHVIDDLSLERERL--LRSKRHRGK 428
Cdd:COG2433 456 EERREIRKDREISRLDREIERLERELEEERERIEELKRKLERLkeLWKLEHSGE 509
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
56-360 |
2.21e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 41.20 E-value: 2.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 56 LEREQEQRRHTAYISELKAKLHEeKTKELQALREALirQHEQEAARTAKIKEGELQRLqatlnvLRDGAADKVKTALLAD 135
Cdd:TIGR02168 673 LERRREIEELEEKIEELEEKIAE-LEKALAELRKEL--EELEEELEQLRKELEELSRQ------ISALRKDLARLEAEVE 743
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 136 AREEARRTFDGERQRLQQEILELKAARKQAEEALsncmQADKAKAADLRAAYQAHQDEVH---RIKRECERDIRRLMDEI 212
Cdd:TIGR02168 744 QLEERIAQLSKELTELEAEIEELEERLEEAEEEL----AEAEAEIEELEAQIEQLKEELKalrEALDELRAELTLLNEEA 819
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 213 KGKERVILALEKELGVQAGQTQRLLLQKEALDEQLVQVKEAerhhsspkrelppgigdmaelmggqdqhmderdvrrfql 292
Cdd:TIGR02168 820 ANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAE--------------------------------------- 860
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 123780845 293 kIAELNSVIRKLEDRNTLLADERNELLKRSRETEVQLKPLVEKNKRMNKKNEDLLHSIQRMEEKLKSL 360
Cdd:TIGR02168 861 -IEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQL 927
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
186-369 |
2.76e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 40.61 E-value: 2.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 186 AYQAHQDEVHRIKRECERDIRRlmDEIKgkervilalekeLGVQAGQTQRLLLQKEALDEQLVQVKEAERHHSSPKRELP 265
Cdd:COG2433 344 AYDAYKNKFERVEKKVPPDVDR--DEVK------------ARVIRGLSIEEALEELIEKELPEEEPEAEREKEHEERELT 409
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 266 PGIGDMAELMGGQDQHMDErdVRRFQLKIAELNSVIRKLEDRNTLLADERNELLKRSRETevqlkplveknKRMNKKNED 345
Cdd:COG2433 410 EEEEEIRRLEEQVERLEAE--VEELEAELEEKDERIERLERELSEARSEERREIRKDREI-----------SRLDREIER 476
|
170 180
....*....|....*....|....
gi 123780845 346 LLHSIQRMEEKLKSLTRENVEMKE 369
Cdd:COG2433 477 LERELEEERERIEELKRKLERLKE 500
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
8-225 |
5.34e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 39.72 E-value: 5.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 8 KGEKPETETDSVQMANEELRaKLTNIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRhtayISELKAKLHEEKTKELQAL 87
Cdd:pfam17380 359 KRELERIRQEEIAMEISRMR-ELERLQMERQQKNERVRQELEAARKVKILEEERQRK----IQQQKVEMEQIRAEQEEAR 433
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 88 REALIRQHEQEAARTAKIKEGELQRlQATLNVLRDGAADKVKTALLADAREEARRTFDGERQR-LQQEILELKAA---RK 163
Cdd:pfam17380 434 QREVRRLEEERAREMERVRLEEQER-QQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKiLEKELEERKQAmieEE 512
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 123780845 164 QAEEALSNCMQADKAKAADLRAAYQAHQDEVHRIKRECERDIRRLMDEIKGKERVILALEKE 225
Cdd:pfam17380 513 RKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMERE 574
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
82-255 |
5.37e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 39.90 E-value: 5.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 82 KELQALREALIRQHEQ-----------EAARTAKIKEGELQRLQATLNVLRDGAadkvKTALLADAREEARRtfdgERQR 150
Cdd:COG4913 235 DDLERAHEALEDAREQiellepirelaERYAAARERLAELEYLRAALRLWFAQR----RLELLEAELEELRA----ELAR 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 151 LQQEILELKAARKQAEEalsncmqadkakaaDLRAAYQAHQDEVHRIKRECERDIRRLMDEIKGKERVILALE---KELG 227
Cdd:COG4913 307 LEAELERLEARLDALRE--------------ELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEallAALG 372
|
170 180
....*....|....*....|....*....
gi 123780845 228 VQAGQTQR-LLLQKEALDEQLVQVKEAER 255
Cdd:COG4913 373 LPLPASAEeFAALRAEAAALLEALEEELE 401
|
|
| PRK05035 |
PRK05035 |
electron transport complex protein RnfC; Provisional |
34-253 |
5.88e-03 |
|
electron transport complex protein RnfC; Provisional
Pssm-ID: 235334 [Multi-domain] Cd Length: 695 Bit Score: 39.55 E-value: 5.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 34 QIEFQQEKSKVGKLRERLQEAKLEREQEQRrhtayisELKAKLHEEKTKE--LQALREALIRQHEQEAARTAK------- 104
Cdd:PRK05035 440 AIEQEKKKAEEAKARFEARQARLEREKAAR-------EARHKKAAEARAAkdKDAVAAALARVKAKKAAATQPivikaga 512
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 105 -------IKEGELQRLQATLNVLRDGAAD----------------KVKTALLADAREEARRTFDGERQRLQQEILELKaA 161
Cdd:PRK05035 513 rpdnsavIAAREARKAQARARQAEKQAAAaadpkkaavaaaiaraKAKKAAQQAANAEAEEEVDPKKAAVAAAIARAK-A 591
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 162 RKQAEEALSNCMQADKAKAADLRAAYQAHQDEVHRIKRECERDIRRLMDEIKGKERVILALEKELGVQAGQTQRLLLQKE 241
Cdd:PRK05035 592 KKAAQQAASAEPEEQVAEVDPKKAAVAAAIARAKAKKAEQQANAEPEEPVDPRKAAVAAAIARAKARKAAQQQANAEPEE 671
|
250
....*....|..
gi 123780845 242 ALDEQLVQVKEA 253
Cdd:PRK05035 672 AEDPKKAAVAAA 683
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
131-373 |
7.46e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 38.98 E-value: 7.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 131 ALLADAREEARRTFDGERQRLQQEILELKAARKQAeealsncmQADKAKAADLRAAYQAHQDEVHRIKRECERDIRRLMD 210
Cdd:COG4942 12 ALAAAAQADAAAEAEAELEQLQQEIAELEKELAAL--------KKEEKALLKQLAALERRIAALARRIRALEQELAALEA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 211 EIKGKERVILALEKELGVQAGQTQRLL--LQKEALDEQLVQVKEAERhhsspkrelPPGIGDMAELMGGQDQHMDERdvr 288
Cdd:COG4942 84 ELAELEKEIAELRAELEAQKEELAELLraLYRLGRQPPLALLLSPED---------FLDAVRRLQYLKYLAPARREQ--- 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123780845 289 rfqlkIAELNSVIRKLEDRNTLLADERNELLKRSRETEVQLKPLVEKNKRMNKKNEDLLHSIQRMEEKLKSLTRENVEMK 368
Cdd:COG4942 152 -----AEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELE 226
|
....*
gi 123780845 369 EKLSA 373
Cdd:COG4942 227 ALIAR 231
|
|
| |
