|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10266 |
PRK10266 |
curved DNA-binding protein; |
1-306 |
0e+00 |
|
curved DNA-binding protein;
Pssm-ID: 182347 [Multi-domain] Cd Length: 306 Bit Score: 670.38 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQ 80
Cdd:PRK10266 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 81 FHHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTL 160
Cdd:PRK10266 81 FQHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 161 NVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLT 240
Cdd:PRK10266 161 NVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKESILLT 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 123559207 241 IPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA 306
Cdd:PRK10266 241 IPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDEKTAALWQQLADAQSSFDPRKDWGKA 306
|
|
| DnaJ_bact |
TIGR02349 |
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ... |
5-293 |
3.36e-90 |
|
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Pssm-ID: 274090 [Multi-domain] Cd Length: 354 Bit Score: 272.55 E-value: 3.36e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQF-HH 83
Cdd:TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGgGF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 84 GDGQSFNAEDFDDIFSSIFGQHARQSRQRPAA--RGHDIEIEVAVFLEETLTEHKRTISYNLPVY--------------- 146
Cdd:TIGR02349 81 NGFDIGFFGDFGDIFGDFFGGGGGSGRRRRSGprRGEDLRYDLELTFEEAVFGVEKEIEIPRKEScetchgtgakpgtdp 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 147 -----------------NAFGMIEQEIP---------------------------KTLNVKIPAGVGNGQRIRLKGQGTP 182
Cdd:TIGR02349 161 ktcptcggtgqvrrqqgTPFGFFQQQQTcptcggegkiikepcstckgkgrvkerKTITVKIPAGVDTGQRLRVSGKGNA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 183 GENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKK 262
Cdd:TIGR02349 241 GENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVKLKIPAGTQSGTVFRLKGKGVPRLR 320
|
330 340 350
....*....|....*....|....*....|...
gi 123559207 263 --QTGDLYAVLKIVMPPKPDENTAALWQQLADA 293
Cdd:TIGR02349 321 gnGRGDLLVTVKVETPKNLSKEQKELLEELAEA 353
|
|
| PRK14280 |
PRK14280 |
molecular chaperone DnaJ; |
1-291 |
7.53e-85 |
|
molecular chaperone DnaJ;
Pssm-ID: 237656 [Multi-domain] Cd Length: 376 Bit Score: 259.65 E-value: 7.53e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQmWQHrNDPqfNRQ 80
Cdd:PRK14280 1 MAKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQ-FGH-AGP--NQG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 81 FhhgDGQSFNAED------FDDIFSSIFGQHARqsRQRPAA--RGHD------IEIEVAVFLEETLTE------------ 134
Cdd:PRK14280 77 F---GGGGFGGGDfgggfgFEDIFSSFFGGGGR--RRDPNAprQGADlqytmtLTFEEAVFGKEKEIEipkeetcdtchg 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 135 -------HKRTISY-------NLPVYNAFG----------------MIEQEIP-----------KTLNVKIPAGVGNGQR 173
Cdd:PRK14280 152 sgakpgtSKETCSHcggsgqvSVEQNTPFGrvvnrqtcphcngtgqEIKEKCPtchgkgkvrkrKKINVKIPAGVDNGQQ 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 174 IRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRV 253
Cdd:PRK14280 232 IRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKVKLKIPAGTQTGTQFRL 311
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 123559207 254 KGKGL--VSKKQTGDLYAVLKIVMPPKPDENTAALWQQLA 291
Cdd:PRK14280 312 KGKGVpnVRGYGQGDQYVVVRVVTPTKLTDRQKELLREFA 351
|
|
| PRK10767 |
PRK10767 |
chaperone protein DnaJ; Provisional |
1-268 |
4.45e-78 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 236757 [Multi-domain] Cd Length: 371 Bit Score: 241.97 E-value: 4.45e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQmwqhrndpqfnr 79
Cdd:PRK10767 1 MAKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPgDKEAEEKFKEIKEAYEVLSDPQKRAAYDQ------------ 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 80 qFHH------------GDGQSFnAEDFDDIFSSIFGQHARQSRQRpAARGHDIEIEVAVFLEETLTEHKRTISYnlPVYN 147
Cdd:PRK10767 69 -YGHaafeqggggggfGGGGGF-GDIFGDIFGDIFGGGRGGGRQR-ARRGADLRYNMEITLEEAVRGVTKEIRI--PTLV 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 148 A--------------------------------FGMIEQ-------------------------EIPKTLNVKIPAGVGN 170
Cdd:PRK10767 144 TcdtchgsgakpgtspktcptchgagqvrmqqgFFTVQQtcptchgrgkiikdpckkchgqgrvEKEKTLSVKIPAGVDT 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 171 GQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQR 250
Cdd:PRK10767 224 GDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVKLKIPEGTQTGKL 303
|
330 340
....*....|....*....|
gi 123559207 251 LRVKGKGL--VSKKQTGDLY 268
Cdd:PRK10767 304 FRLRGKGVksVRSGARGDLY 323
|
|
| PRK14295 |
PRK14295 |
molecular chaperone DnaJ; |
4-302 |
5.37e-73 |
|
molecular chaperone DnaJ;
Pssm-ID: 237665 [Multi-domain] Cd Length: 389 Bit Score: 229.74 E-value: 5.37e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQ------HRNDP- 75
Cdd:PRK14295 9 KDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKgDAKAEERFKEISEAYDVLSDEKKRKEYDEARSlfgnggFRPGPg 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 76 -----QFNrqFHHGD---------GQSFNAEDFDDIFSSIFGQHARQSRQRpaaRGHDIEIEVAVFLEETLTehKRTISY 141
Cdd:PRK14295 89 gggggGFN--FDLGDlfgggaqggGGAGGGGGLGDVFGGLFNRGGRRTQPR---RGADVESEVTLSFTEAID--GATVPL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 142 NL-----------------------PVYNAFGMIEQ---------------------EIP-------------KTLNVKI 164
Cdd:PRK14295 162 RLtsqapcpacsgtgakngttprvcPTCSGTGQVSRnsggfslsepcpdckgrgliaDDPclvckgsgrakssRTMQVRI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 165 PAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLK-ESILLTIPP 243
Cdd:PRK14295 242 PAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGgPPVTVKLPP 321
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 244 GSQAGQRLRVKGKGLVSKKQT-GDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKD 302
Cdd:PRK14295 322 GTPNGRVLRVRGKGAVRKDGTrGDLLVTVEVAVPKDLSGKAREALEAFREATADEDPRAE 381
|
|
| PRK14279 |
PRK14279 |
molecular chaperone DnaJ; |
4-304 |
4.32e-70 |
|
molecular chaperone DnaJ;
Pssm-ID: 237655 [Multi-domain] Cd Length: 392 Bit Score: 222.30 E-value: 4.32e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFH 82
Cdd:PRK14279 9 KDFYKELGVSSDASAEEIKKAYRKLARELHPDANPgDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGRRF 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 83 HG-----------DGQSFNAED-FD-----------DIFSSIFGQHARQSRQRPAARGHDIEIEVAV-FLEETL------ 132
Cdd:PRK14279 89 DGgggfggfgtggDGAEFNLNDlFDaagrgggggigDLFGGLFNRGGGSARPSRPRRGNDLETETTLdFVEAAKgvtmpl 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 133 ----------------------------------TEHKRTISYNLPVYNAFG---MIEQEIP-----------KTLNVKI 164
Cdd:PRK14279 169 rltspapcttchgsgarpgtspkvcptcngsgviSRNQGAFGFSEPCTDCRGtgsIIEDPCEeckgtgvttrtRTINVRI 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 165 PAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPG 244
Cdd:PRK14279 249 PPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPVGVKVPAG 328
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 123559207 245 SQAGQRLRVKGKGlVSKKQ--TGDLYAVLKIVMPPKPDENTAALWQQLADAQ--SSFDPRKDWG 304
Cdd:PRK14279 329 TADGRILRVRGRG-VPKRSggAGDLLVTVKVAVPPNLDGAAAEALEAYAEAEraSGFDPRAGWA 391
|
|
| PRK14276 |
PRK14276 |
chaperone protein DnaJ; Provisional |
1-278 |
5.99e-70 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237653 [Multi-domain] Cd Length: 380 Bit Score: 221.50 E-value: 5.99e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFN-- 78
Cdd:PRK14276 1 MNNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGgg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 79 -RQFHHGDGQSFNAeDFDDIFSSIFGQHARqsRQRPAA--RGHDIEIEVAVFLEETLTEHKRTISYNL------------ 143
Cdd:PRK14276 81 aGGFGGFDGSGGFG-GFEDIFSSFFGGGGA--RRNPNAprQGDDLQYRVNLDFEEAIFGKEKEVSYNReatchtcngsga 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 144 -----PV---------------YNAFGMIE------------QEIPK---------------TLNVKIPAGVGNGQRIRL 176
Cdd:PRK14276 158 kpgtsPVtcgkchgsgvitvdtQTPLGMMRrqvtcdvchgtgKEIKEpcqtchgtghekqahTVSVKIPAGVETGQQIRL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 177 KGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGK 256
Cdd:PRK14276 238 QGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGDVELKIPAGTQTGKKFRLRGK 317
|
330 340
....*....|....*....|....
gi 123559207 257 GLVSKK--QTGDLYAVLKIVMPPK 278
Cdd:PRK14276 318 GAPKLRggGNGDQHVTVNIVTPTK 341
|
|
| PRK14277 |
PRK14277 |
chaperone protein DnaJ; Provisional |
1-301 |
7.51e-70 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 184599 [Multi-domain] Cd Length: 386 Bit Score: 221.60 E-value: 7.51e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNR 79
Cdd:PRK14277 2 AAKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPgDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 80 Q--FHHGD-GQSFNAED-------FDDIFSSIFGQHARQSRQRPAaRGHDIEIEVAVFLEETL--TEHKRTIS------- 140
Cdd:PRK14277 82 QggFGQGGfGGGGFDFDfggfgdiFEDIFGDFFGTGRRRAETGPQ-KGADIRYDLELTFEEAAfgTEKEIEVErfekcdv 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 141 ------------YNLPVYNAFGMIE--QEIP------------------------------------KTLNVKIPAGVGN 170
Cdd:PRK14277 161 ckgsgakpgskpVTCPVCHGTGQVRtrQNTPfgrivnirtcdrchgegkiitdpcnkcggtgrirrrRKIKVNIPAGIDD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 171 GQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQR 250
Cdd:PRK14277 241 GQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGKVKFTIPEGTQTGTK 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 123559207 251 LRVKGKGL--VSKKQTGDLYAVLKIVMPPKPDENTAALWQQLAD--AQSSFDPRK 301
Cdd:PRK14277 321 FRLRGKGIphLRGRGRGDQIVKVYIEVPKKLTEKQKELLREFEKlsGEEGTESRK 375
|
|
| PRK14283 |
PRK14283 |
chaperone protein DnaJ; Provisional |
1-292 |
9.41e-70 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 184604 [Multi-domain] Cd Length: 378 Bit Score: 220.85 E-value: 9.41e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDqmwqhrndpqfnrQ 80
Cdd:PRK14283 2 AEKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYD-------------Q 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 81 FHHGDGQSFNAED------FDDIFS-------SIFGQHA-RQSRQRPAARGHDIEIEVAVFLEETLT--------EHKR- 137
Cdd:PRK14283 69 FGHAGMDGFSQEDifnninFEDIFQgfgfgigNIFDMFGfGGGSRHGPQRGADIYTEVEITLEEAASgvekdikvRHTKk 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 138 ------------TISYNLPVYNAFGMIEQ-------------------------EIP-------------KTLNVKIPAG 167
Cdd:PRK14283 149 cpvcngsraepgSEVKTCPTCGGTGQVKQvrntilgqmmnvttcpdcqgegkivEKPcsnchgkgvvretKTISVKIPAG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 168 VGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQA 247
Cdd:PRK14283 229 VETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAGTQS 308
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 123559207 248 GQRLRVKGKGLVSKKQT--GDLYAVLKIVMPPKPDENTAALWQQLAD 292
Cdd:PRK14283 309 GTTFRLKGHGMPSLRWSgkGNLYVKVKVVVPKKLSPKQKELLREFAS 355
|
|
| PRK14299 |
PRK14299 |
chaperone protein DnaJ; Provisional |
1-293 |
1.24e-66 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237667 [Multi-domain] Cd Length: 291 Bit Score: 210.18 E-value: 1.24e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQM--------WQHR 72
Cdd:PRK14299 1 MAYKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYgttaasagWQGP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 73 NDPQFNrqfhHGDGQSFNAEDFDDIFSSIFG--------QHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNlp 144
Cdd:PRK14299 81 PPGPPG----GGDFSGFNVGDFSDFFQQLFGgrggfggfGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVEVA-- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 145 vynafgmieqeiPKTLNVKIPAGVGNGQRIRLKGQGTPGenggpnGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAAL 224
Cdd:PRK14299 155 ------------GERLSVRIPPGVREGQVIRLAGKGRQG------GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVV 216
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 225 GAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSK-KQTGDLYAVLKIVMPPKPDENTAALWQQLADA 293
Cdd:PRK14299 217 GGKVRVMTLDGPVEVTIPPRTQAGRKLRLKGKGWPRGpAGRGDQYAEVRITIPTRPTPEEERLYKQLAEL 286
|
|
| PRK14291 |
PRK14291 |
chaperone protein DnaJ; Provisional |
4-276 |
2.44e-62 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237661 [Multi-domain] Cd Length: 382 Bit Score: 201.92 E-value: 2.44e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFhh 83
Cdd:PRK14291 3 KDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQ-- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 84 gDGQSFNA----------EDFDDIF--SSIFGQHA-----RQSRQRPaARGHDIEIEVAVFLEETLteHKRTISYNLPVY 146
Cdd:PRK14291 81 -GQEGFSDfgggniedilEDVFDIFgfGDIFGRRRatrerRKTYQRP-VKGEDIYQTVEISLEEAY--TGTTVSLEVPRY 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 147 --------------------------------NAFGMIEQEIP------------------------KTLNVKIPAGVGN 170
Cdd:PRK14291 157 vpceacggtgydpgsgekvcptcggsgeiyqrGGFFRISQTCPtcggegvlrepcskcngrglvikkETIKVRIPPGVDN 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 171 GQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLK-ESILLTIPPGSQAGQ 249
Cdd:PRK14291 237 GSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDgKKEKVKIPPGTKEGD 316
|
330 340
....*....|....*....|....*....
gi 123559207 250 RLRVKGKGLVSKKQT--GDLYAVLKIVMP 276
Cdd:PRK14291 317 KIRVPGKGMPRLKGSgyGDLVVRVHIDVP 345
|
|
| PRK14298 |
PRK14298 |
chaperone protein DnaJ; Provisional |
4-290 |
3.25e-61 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 184612 [Multi-domain] Cd Length: 377 Bit Score: 198.92 E-value: 3.25e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQ--F 81
Cdd:PRK14298 5 RDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAEdiF 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 82 HHGDgqsFNaeDFDDIFSSIFGQHARQSRQRPaARGHDIEIEVAVFLEET------------------------------ 131
Cdd:PRK14298 85 RGAD---FG--GFGDIFEMFFGGGGRRGRMGP-RRGSDLRYDLYITLEEAafgvrkdidvpraercstcsgtgakpgtsp 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 132 -----------LTEHKRTISYNL--------------------PVYNAFGMIEQEipKTLNVKIPAGVGNGQRIRLKGQG 180
Cdd:PRK14298 159 krcptcggtgqVTTTRSTPLGQFvttttcstchgrgqviespcPVCSGTGKVRKT--RKITVNVPAGADSGLRLKLSGEG 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 181 TPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGL-- 258
Cdd:PRK14298 237 EAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGKVKMNIPPGTQTHSVFRLKDKGMpr 316
|
330 340 350
....*....|....*....|....*....|..
gi 123559207 259 VSKKQTGDLYAVLKIVMPPKPDENTAALWQQL 290
Cdd:PRK14298 317 LHGHGKGDQLVKVIVKTPTKLTQEQKELLREF 348
|
|
| PRK14301 |
PRK14301 |
chaperone protein DnaJ; Provisional |
1-278 |
1.34e-60 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237668 [Multi-domain] Cd Length: 373 Bit Score: 197.27 E-value: 1.34e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVS-KEPDAEARFKEVAEAWEVLSDEQRRAEYDQmwqhrndpqfnr 79
Cdd:PRK14301 1 MSQRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNpDNPEAEQKFKEAAEAYEVLRDAEKRARYDR------------ 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 80 qFHH------GDGQSF-NAED----FDDIFSSIFGQHARQSRQRP------------------AARGHDIEIEVAV---- 126
Cdd:PRK14301 69 -FGHagvngnGGFGGFsSAEDifshFSDIFGDLFGFSGGGSRRGPrpqagsdlrynltvsfrqAAKGDEVTLRIPKnvtc 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 127 -----------FLEETLTE-------------------------HKRTISYNLPVYNAFGMIEQEipKTLNVKIPAGVGN 170
Cdd:PRK14301 148 ddcggsgaapgTSPETCRHcggsgqvrqsqgffqiavpcpvcrgEGRVITHPCPKCKGSGIVQQT--RELKVRIPAGVDT 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 171 GQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQR 250
Cdd:PRK14301 226 GSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPVTLDIPKGTQSGEV 305
|
330 340 350
....*....|....*....|....*....|
gi 123559207 251 LRVKGKGL--VSKKQTGDLYAVLKIVMPPK 278
Cdd:PRK14301 306 FRLRGKGLpyLGSSQKGDLLVEVSVVTPTK 335
|
|
| PRK14287 |
PRK14287 |
chaperone protein DnaJ; Provisional |
1-291 |
1.59e-59 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237659 [Multi-domain] Cd Length: 371 Bit Score: 194.46 E-value: 1.59e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQhrNDPqfNRQ 80
Cdd:PRK14287 1 MSKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGH--TDP--NQG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 81 FHHGDGQSFNAedFDDIFSSIFGQHARQSRQRPAARGHDI------EIEVAVFLEETLTEHKR---------------TI 139
Cdd:PRK14287 77 FGGGGAGDFGG--FSDIFDMFFGGGGGRRNPNAPRQGADLqytmtlEFKEAVFGKETEIEIPReetcgtchgsgakpgTK 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 140 SYNLPVYNAFGM--IEQEIP------------------------------------KTLNVKIPAGVGNGQRIRLKGQGT 181
Cdd:PRK14287 155 PETCSHCGGSGQlnVEQNTPfgrvvnrrvchhcegtgkiikqkcatcggkgkvrkrKKINVKVPAGIDHGQQLRVSGQGE 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 182 PGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGL--V 259
Cdd:PRK14287 235 AGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVKLKIPAGTQTGTSFRLRGKGVpnV 314
|
330 340 350
....*....|....*....|....*....|..
gi 123559207 260 SKKQTGDLYAVLKIVMPPKPDENTAALWQQLA 291
Cdd:PRK14287 315 HGRGQGDQHVQVRVVTPKNLTEKEKELMREFA 346
|
|
| PRK14278 |
PRK14278 |
chaperone protein DnaJ; Provisional |
4-295 |
3.72e-57 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237654 [Multi-domain] Cd Length: 378 Bit Score: 188.34 E-value: 3.72e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 4 KDYYAIMGVK--PTDDlkTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQmwqhRNDPQFNRQf 81
Cdd:PRK14278 3 RDYYGLLGVSrnASDA--EIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDL----GGDPLESAG- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 82 HHGDGQSFNAEDFDDIFSSIFGQHARQ----SRQRPaarGHDIEIEVAVFLEETLTEHKRTI------------------ 139
Cdd:PRK14278 76 GGGGGFGGGFGGLGDVFEAFFGGGAASrgprGRVRP---GSDSLLRMRLDLEECATGVTKQVtvdtavlcdrchgkgtag 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 140 -----------------------------SYNLPVYNAFGMIeqeIP---------------KTLNVKIPAGVGNGQRIR 175
Cdd:PRK14278 153 dskpvtcdtcggrgevqtvqrsflgqvmtSRPCPTCRGVGEV---IPdpchecagdgrvrarREITVKIPAGVGDGMRIR 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 176 LKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLK-ESILLTIPPGSQAGQRLRVK 254
Cdd:PRK14278 230 LAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILdGPSEITIPPGTQPGSVITLR 309
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 123559207 255 GKGLVSKKQT--GDLYAVLKIVMPPKPDENTAALWQQLADAQS 295
Cdd:PRK14278 310 GRGMPHLRSGgrGDLHAHVEVVVPTRLDHEDIELLRELKALRG 352
|
|
| PRK14294 |
PRK14294 |
chaperone protein DnaJ; Provisional |
1-276 |
2.42e-56 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237664 [Multi-domain] Cd Length: 366 Bit Score: 186.12 E-value: 2.42e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDvsKEP---DAEARFKEVAEAWEVLSDEQRRAEYDQMWqhrndpqf 77
Cdd:PRK14294 1 MVKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPD--RNPgdkEAEELFKEAAEAYEVLSDPKKRGIYDQYG-------- 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 78 nrqfHHG-DGQSFNA-EDFDDIFSS---IFGQ-----HARQSRQRPAAR-GHDIEIEVAV-FLEETLTEHKR-------- 137
Cdd:PRK14294 71 ----HEGlSGTGFSGfSGFDDIFSSfgdIFEDffgfgGGRRGRSRTAVRaGADLRYDLTLpFLEAAFGTEKEiriqklet 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 138 ----------------------------------TISYNLPVYNAFG-MIEQ-----------EIPKTLNVKIPAGVGNG 171
Cdd:PRK14294 147 ceechgsgcepgtspttcpqcggsgqvtqsqgffSIRTTCPRCRGMGkVIVSpcktchgqgrvRVSKTVQVKIPAGVDTG 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 172 QRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRL 251
Cdd:PRK14294 227 SRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIF 306
|
330 340
....*....|....*....|....*..
gi 123559207 252 RVKGKGLVSKK--QTGDLYAVLKIVMP 276
Cdd:PRK14294 307 RFKGKGIPSLRggGRGDQIIEVEVKVP 333
|
|
| PRK14297 |
PRK14297 |
molecular chaperone DnaJ; |
1-278 |
2.57e-56 |
|
molecular chaperone DnaJ;
Pssm-ID: 184611 [Multi-domain] Cd Length: 380 Bit Score: 186.53 E-value: 2.57e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQhrNDPQFNR 79
Cdd:PRK14297 1 MASKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKgNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGT--ADFNGAG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 80 QFHHGDGQSFNAED---FDDIFSSIFGQHARQSRQRPAA--RGHDIEIEVAVFLEE---------TLTEHKR-------- 137
Cdd:PRK14297 79 GFGSGGFGGFDFSDmggFGDIFDSFFGGGFGSSSRRRNGpqRGADIEYTINLTFEEavfgvekeiSVTRNENcetcngtg 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 138 ----TISYNLPVYNAFGMI--EQEIP------------------------------------KTLNVKIPAGVGNGQRIR 175
Cdd:PRK14297 159 akpgTSPKTCDKCGGTGQIrvQRNTPlgsfvstttcdkcggsgkviedpcnkchgkgkvrknRKIKVNVPAGVDTGNVIP 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 176 LKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKG 255
Cdd:PRK14297 239 LRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGEVKYEVPAGTQPGTVFRLKG 318
|
330 340
....*....|....*....|....*
gi 123559207 256 KGL--VSKKQTGDLYaVLKIVMPPK 278
Cdd:PRK14297 319 KGVprVNSTGRGNQY-VTVIVDIPK 342
|
|
| PRK14282 |
PRK14282 |
chaperone protein DnaJ; Provisional |
1-291 |
7.78e-56 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 184603 [Multi-domain] Cd Length: 369 Bit Score: 185.00 E-value: 7.78e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE--PDAEARFKEVAEAWEVLSDEQRRAEYDQmWQHRNDPQFN 78
Cdd:PRK14282 1 REKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPEnrKEAEQKFKEIQEAYEVLSDPQKRAMYDR-FGYVGEQPPY 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 79 RQFHHGDG------QSFnaEDF--DDIFSSIFGQHARQSRQRPAAR-GHDIEIEVAVFLEETLTEHKRTISY-------- 141
Cdd:PRK14282 80 QETESGGGffedifKDF--ENIfnRDIFDIFFGERRTQEEQREYARrGEDIRYEIEVTLSDLINGAEIPVEYdryetcph 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 142 -------------NLPVYNAFGMIEQE----------------------IPKTL----------------NVKIPAGVGN 170
Cdd:PRK14282 158 cggtgvepgsgyvTCPKCHGTGRIREErrsffgvfvsertcercggtgkIPGEYchecggsgrirrrvrtTVKIPAGVED 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 171 GQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLK-ESILLTIPPGSQAGQ 249
Cdd:PRK14282 238 GTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEgGTTMLKIPPGTQPET 317
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 123559207 250 RLRVKGKGLVSKK--QTGDLYAVLKIVMPPKPDENTAALWQQLA 291
Cdd:PRK14282 318 VFRLKGKGLPNMRygRRGDLIVNVHVEIPKRLSREERKLLKELA 361
|
|
| DnaJ_C |
cd10747 |
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 ... |
119-278 |
1.60e-54 |
|
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70.
Pssm-ID: 199909 [Multi-domain] Cd Length: 158 Bit Score: 174.54 E-value: 1.60e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 119 DIEIEVAVFLEETLTEHKRTISYNLPVynafgmIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHI 198
Cdd:cd10747 2 DLRYDLELTLEEAYFGKEKEIKIPRKV------TRVREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNGGPPGDLYVVIRV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 199 APHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKK--QTGDLYAVLKIVMP 276
Cdd:cd10747 76 KPHPVFRRDGNDLYCEVPISLTEALLGGEIEVPTLGGKVKLKIPPGTQPGTVLRLKGKGMPRLRggGRGDLYVEVKVEFP 155
|
..
gi 123559207 277 PK 278
Cdd:cd10747 156 KK 157
|
|
| PRK14293 |
PRK14293 |
molecular chaperone DnaJ; |
5-295 |
4.83e-54 |
|
molecular chaperone DnaJ;
Pssm-ID: 237663 [Multi-domain] Cd Length: 374 Bit Score: 180.19 E-value: 4.83e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQhrndpqfnrqfhHG 84
Cdd:PRK14293 4 DYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGE------------AG 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 85 DGQSFNAED------FDDIFSSIF------GQHARQSRQRPAARGHD------IEIEVAVF----------LEETLT--- 133
Cdd:PRK14293 72 VSGAAGFPDmgdmggFADIFETFFsgfggaGGQGGRRRRRGPQRGDDlrydlkLDFREAIFggekeiriphLETCETcrg 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 134 ----------------------EHKRTISYNL------PVYNAFG-MIEQ-----------EIPKTLNVKIPAGVGNGQR 173
Cdd:PRK14293 152 sgakpgtgpttcstcggagqvrRATRTPFGSFtqvsecPTCNGTGqVIEDpcdacggqgvkQVTKKLKINIPAGVDTGTR 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 174 IRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRV 253
Cdd:PRK14293 232 LRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPAGTQPNTVLTL 311
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 123559207 254 KGKGL------VSKkqtGDLYAVLKIVMPPKPDENTAALWQQLADAQS 295
Cdd:PRK14293 312 ENKGVprlgnpVAR---GDHLITVKVKIPTRISDEERELLEKLAKIKG 356
|
|
| DnaJ_C |
pfam01556 |
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It ... |
158-276 |
1.20e-53 |
|
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. The two C-terminal domains CTDI and CTDII, both incorporated in this family are necessary for maintaining the J-domains in their specific relative positions. Structural analysis of PDB:1nlt shows that PF00684 is nested within this DnaJ C-terminal region.
Pssm-ID: 460251 [Multi-domain] Cd Length: 213 Bit Score: 174.37 E-value: 1.20e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 158 KTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESI 237
Cdd:pfam01556 93 KTLEVKIPAGVDDGQRIRLRGEGDAGENGGPPGDLYVVIRVKPHPVFRRDGDDLYCTVPISLTEALLGGTIEVPTLDGKV 172
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 123559207 238 LLTIPPGSQAGQRLRVKGKGLVSKK--QTGDLYAVLKIVMP 276
Cdd:pfam01556 173 KLKIPAGTQPGTVLRLKGKGMPRLKggGRGDLYVTVKVEVP 213
|
|
| PRK14300 |
PRK14300 |
chaperone protein DnaJ; Provisional |
4-276 |
1.55e-52 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 172788 [Multi-domain] Cd Length: 372 Bit Score: 176.36 E-value: 1.55e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMwqhRNDPQFNRQFHH 83
Cdd:PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRF---GHDAFQNQQSRG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 84 GDGQ--SFNAED---FDDIFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPV------------- 145
Cdd:PRK14300 80 GGGNhgGFHPDIndiFGDFFSDFMGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVkcdtchgsgsekg 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 146 -----------------YNAFGMIEQEIPK-------------------------TLNVKIPAGVGNGQRIRLKGQGTPG 183
Cdd:PRK14300 160 etvttcdacsgvgatrmQQGFFTIEQACHKcqgngqiiknpckkchgmgryhkqrNLSVNIPAGVENGTRIRHTGEGEAG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 184 ENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLK-ESILLTIPPGSQAGQRLRVKGKGLVSKK 262
Cdd:PRK14300 240 IRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEgGKVNLTIPAGTQNGDQLRLRSKGMSKMR 319
|
330
....*....|....*.
gi 123559207 263 QT--GDLYAVLKIVMP 276
Cdd:PRK14300 320 STirGDMLTHIHVEVP 335
|
|
| PRK14286 |
PRK14286 |
chaperone protein DnaJ; Provisional |
1-291 |
3.66e-52 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 172774 [Multi-domain] Cd Length: 372 Bit Score: 175.56 E-value: 3.66e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQmwqhrndpqFNR 79
Cdd:PRK14286 1 MSERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKgNKESEEKFKEATEAYEILRDPKKRQAYDQ---------FGK 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 80 QFHHGDGQSFNAE----------DFDDIFSSIFGQhARQS-----RQRPAARGHDIEIEVAVFLEETL--TEHK------ 136
Cdd:PRK14286 72 AGVNAGAGGFGQGaytdfsdifgDFGDIFGDFFGG-GRGGgsgggRRSGPQRGSDLRYNLEVSLEDAAlgREYKieiprl 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 137 ------------------------------RT-----ISYNLPVYNAFGMI------------EQEIPKTLNVKIPAGVG 169
Cdd:PRK14286 151 escvdcngsgaskgsspttcpdcggsgqirRTqgffsVATTCPTCRGKGTVisnpcktcggqgLQEKRRTINIKIPPGVE 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 170 NGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLK-ESILLTIPPGSQAG 248
Cdd:PRK14286 231 TGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDgKKAKMKIPEGTESG 310
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 123559207 249 QRLRVKGKGL--VSKKQTGDLYAVLKIVMPPKPDENTAALWQQLA 291
Cdd:PRK14286 311 QVFRLKGHGMpyLGAYGKGDQHVIVKIEIPKKITRRQRELIEEFA 355
|
|
| PRK14281 |
PRK14281 |
chaperone protein DnaJ; Provisional |
4-290 |
4.75e-48 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237657 [Multi-domain] Cd Length: 397 Bit Score: 165.37 E-value: 4.75e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDvsKEPD---AEARFKEVAEAWEVLSDEQRRAEYDQmwqhrndpqfnrq 80
Cdd:PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPD--KNPDnkeAEEHFKEVNEAYEVLSNDDKRRRYDQ------------- 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 81 FHH---------GDGQSF--NAEDFDDIFSS---------------------IFGQHARQSRQRPAARGHDIEIEVAVFL 128
Cdd:PRK14281 68 FGHagvgssaasGGGPGYggGGGDFNDIFSAfndmfgggarrgggspfgfedVFGGGGRRRRASAGIPGTDLKIRLKLTL 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 129 EE-------TL-------------TEHKRTISYNLPVYNAFGMIEQ----------------------EIPK-------- 158
Cdd:PRK14281 148 EEiakgvekTLkikkqvpckecngTGSKTGATETCPTCHGSGEVRQasktmfgqfvnitacptcggegRVVKdrcpacyg 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 159 --------TLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTV 230
Cdd:PRK14281 228 egikqgevTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEV 307
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 123559207 231 PTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQT--GDLYAVLKIVMPPKPDENTAALWQQL 290
Cdd:PRK14281 308 PTLDGAVKLTIPAGTQPETMLRIPGKGIGHLRGSgrGDQYVRVNVFVPKEVSHQDKELLKEL 369
|
|
| PRK14296 |
PRK14296 |
chaperone protein DnaJ; Provisional |
1-300 |
4.75e-45 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237666 [Multi-domain] Cd Length: 372 Bit Score: 156.65 E-value: 4.75e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQ 80
Cdd:PRK14296 1 MKKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 81 FHHGDGQSF-------NAEDFDDIFSSIFGQHaRQSRQRPaARGHDIEIEVAVFLEETLTEHKRTISYNL---------- 143
Cdd:PRK14296 81 SNFGDFEDLfsnmgssGFSSFTNIFSDFFGSN-KSDYQRS-TKGQSVSLDIYLTFKELLFGVDKIIELDLltncskcfgs 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 144 -------------------------------------PVYNAFGMIEQEIPKT------------LNVKIPAGVGNGQRI 174
Cdd:PRK14296 159 gaesnsdihicnnchgtgevlvqknmgffqfqqsakcNVCNGAGKIIKNKCKNckgkgkylerkkIEVNIPKGIRPNQQI 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 175 RLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIV-GQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRV 253
Cdd:PRK14296 239 KLSQKGHASLNNGVNGDLIIDIYLKESKVFEIInNNDILMTYNISYLDAILGNEIIIKTLDGDIKYKLPKSINSNELIII 318
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 123559207 254 KGKGL---VSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADaQSSFDPR 300
Cdd:PRK14296 319 NNKGLyksINKDKRGDLIIKVNIVVPKNLSKKEKELIEQIYE-QTSFNPE 367
|
|
| PRK14292 |
PRK14292 |
chaperone protein DnaJ; Provisional |
3-278 |
5.60e-45 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237662 [Multi-domain] Cd Length: 371 Bit Score: 156.59 E-value: 5.60e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDqmwqhrndpQFNRQFH 82
Cdd:PRK14292 1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYD---------RFGTAPG 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 83 HG--DGQSFNAEDFD--DIFSSIFGQHARQSR--QRPAARGHDIEIEVAVFLEE--------------TLTEH---KRTI 139
Cdd:PRK14292 72 AGmpGGDPFGGMGFDpmDIFEQLFGGAGFGGGrgRRGPARGDDLETEARITLEQarageevevevdrlTECEHchgSRTE 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 140 SYNLP----------------VYNAFGMIEQEIP---------------------------KTLNVKIPAGVGNGQRIRL 176
Cdd:PRK14292 152 PGGKPpktcptcrgagavraqARTIFGVVETQQPcptcrgegqiitdpctvcrgrgrtlkaETVKVKLPRGIDEGYRIRV 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 177 KGQGTPGENGgpNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGK 256
Cdd:PRK14292 232 AGMGNEGPGG--NGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQVIEVKPGTQHGDLHRLRGQ 309
|
330 340
....*....|....*....|....
gi 123559207 257 GL--VSKKQTGDLYAVLKIVMPPK 278
Cdd:PRK14292 310 GMprLQGAGTGDLIVEYEIAVPKQ 333
|
|
| PRK14289 |
PRK14289 |
molecular chaperone DnaJ; |
1-301 |
5.88e-45 |
|
molecular chaperone DnaJ;
Pssm-ID: 237660 [Multi-domain] Cd Length: 386 Bit Score: 156.92 E-value: 5.88e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDvsKEP---DAEARFKEVAEAWEVLSDEQRRAEYDqmwqhrndpqf 77
Cdd:PRK14289 2 AEKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPD--KNPgdkEAEEKFKEAAEAYDVLSDPDKRSRYD----------- 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 78 nrQFHHG------DGQSFNAEDF--DDIFS---SIFGQH----------ARQSRQRPAARGHDIEIEVAVFLEETLT--E 134
Cdd:PRK14289 69 --QFGHAgvggaaGGGGFSGEGMsmEDIFSmfgDIFGGHgggfggfggfGGGGSQQRVFRGSDLRVKVKLNLKEISTgvE 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 135 HKRTISYNLP-----------------------------VYNA-FGMI-----------EQEIPK--------------- 158
Cdd:PRK14289 147 KKFKVKKYVPcshchgtgaegnngsetcptckgsgsvtrVQNTiLGTMqtqstcptcngEGKIIKkkckkcggegivyge 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 159 -TLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESI 237
Cdd:PRK14289 227 eVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGKA 306
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 123559207 238 LLTIPPGSQAGQRLRVKGKGL--VSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAqSSFDPRK 301
Cdd:PRK14289 307 KVKIEAGTQPGKVLRLRNKGLpsVNGYGTGDLLVNVSVYIPETLSKEEKQTLEKMENS-DNFKPTT 371
|
|
| PRK14284 |
PRK14284 |
chaperone protein DnaJ; Provisional |
5-296 |
1.18e-44 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237658 [Multi-domain] Cd Length: 391 Bit Score: 156.16 E-value: 1.18e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDvsKEP---DAEARFKEVAEAWEVLSDEQRRAEYDQmwqHRNDPQFNRQF 81
Cdd:PRK14284 2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPD--KNPgdaEAEKRFKEVSEAYEVLSDAQKRESYDR---YGKDGPFAGAG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 82 HHGDGQSFNAED---------------FDDIFSSIFG------------QHARQSRQR---------PAARGHDIEIEVA 125
Cdd:PRK14284 77 GFGGAGMGNMEDalrtfmgafggefggGGSFFEGLFGglgeafgmrggpAGARQGASKkvhitlsfeEAAKGVEKELLVS 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 126 VFLEETLTEHKRTIS----------------------YNL----------------PVYNAFGMIEQEIPKTLNVKIPAG 167
Cdd:PRK14284 157 GYKSCDACSGSGANSsqgikvcdrckgsgqvvqsrgfFSMastcpecggegrvitdPCSVCRGQGRIKDKRSVHVHIPAG 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 168 VGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTL--KESILLTIPPGS 245
Cdd:PRK14284 237 VDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLlkEGTCRLTIPEGI 316
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 123559207 246 QAGQRLRVKGKGL--VSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSS 296
Cdd:PRK14284 317 QSGTILKVRGQGFpnVHGKGRGDLLVRISVETPQNLSEEQKELLRQFAATEKA 369
|
|
| PRK14285 |
PRK14285 |
chaperone protein DnaJ; Provisional |
4-291 |
4.85e-42 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 172773 [Multi-domain] Cd Length: 365 Bit Score: 148.60 E-value: 4.85e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE-PDAEARFKEVAEAWEVLSDEQRRAEYDQMWQ--HRNDPQFNrQ 80
Cdd:PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGnKEAESIFKEATEAYEVLIDDNKRAQYDRFGHtaFEGGGGFE-G 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 81 FHHG-DGQSFNAEDFDDIFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKR--TISYNL-------------- 143
Cdd:PRK14285 82 FSGGfSGFSDIFEDFGDIFDSFFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNniNITRNMlcesclgkksekgt 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 144 -----PVYNAFGMIEQ---------EIPK-------------------------TLNVKIPAGVGNGQRIRLKGQGTPGE 184
Cdd:PRK14285 162 spsicNMCNGSGRVMQgggffrvttTCPKcygngkiisnpcksckgkgslkkkeTIELKIPAGIDDNQQIKMRGKGSVNP 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 185 NGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTL-KESILLTIPPGSQAGQRLRVKGKGL--VSK 261
Cdd:PRK14285 242 DNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIaSKKIKIKIPKGTENDEQIIIKNEGMpiLHT 321
|
330 340 350
....*....|....*....|....*....|
gi 123559207 262 KQTGDLYAVLKIVMPPKPDENTAALWQQLA 291
Cdd:PRK14285 322 EKFGNLILIIKIKTPKNLNSNAIKLLENLS 351
|
|
| PRK14290 |
PRK14290 |
chaperone protein DnaJ; Provisional |
4-303 |
1.39e-38 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 172778 [Multi-domain] Cd Length: 365 Bit Score: 139.68 E-value: 1.39e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE--PDAEARFKEVAEAWEVLSDEQRRAEYDQMwqhrNDPQFNrqf 81
Cdd:PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGnkAEAEEKFKEISEAYEVLSDPQKRRQYDQT----GTVDFG--- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 82 hhGDGQSFNAEDF------DDIFSSIFGQH-------ARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISY------- 141
Cdd:PRK14290 76 --AGGSNFNWDNFthfsdiNDIFNQIFGGNfgsdffsGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYrrnamcp 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 142 -------------NLPVYNA------------FGMI---------------EQEIPKT-----------LNVKIPAGVGN 170
Cdd:PRK14290 154 dcsgtgakngkliTCPTCHGtgqqrivrgqgfFRMVtvttcrtcggrgripEEKCPRCngtgtvvvnedISVKIPKGATD 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 171 GQRIRLKGQGTpgENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQR 250
Cdd:PRK14290 234 NLRLRVKGKGQ--SYGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKYNLKIPEGTQPGEV 311
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 123559207 251 LRVKGKGL--VSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSfdpRKDW 303
Cdd:PRK14290 312 LKIKGAGMphLNGHGSGDLLVRINVEVPKRLTSKQKELIREFFDIKEN---HKSW 363
|
|
| DnaJ |
COG0484 |
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ... |
5-136 |
1.87e-29 |
|
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440252 [Multi-domain] Cd Length: 139 Bit Score: 109.41 E-value: 1.87e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRndpqfNRQFHH 83
Cdd:COG0484 1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPgDPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAA-----ELLLAT 75
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 123559207 84 GDGQSFNAEDFDDIFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHK 136
Cdd:COG0484 76 ELAESAAAEAAAAEAKEEAAEAGASEYEAIAEEASQLRLASLLLLLALLELAL 128
|
|
| DnaJ |
pfam00226 |
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ... |
5-66 |
6.27e-29 |
|
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.
Pssm-ID: 395170 [Multi-domain] Cd Length: 63 Bit Score: 105.25 E-value: 6.27e-29
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 123559207 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDV-SKEPDAEARFKEVAEAWEVLSDEQRRAEYD 66
Cdd:pfam00226 1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKnPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
|
|
| CbpA |
COG2214 |
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription]; |
1-79 |
1.18e-25 |
|
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
Pssm-ID: 441816 [Multi-domain] Cd Length: 91 Bit Score: 97.87 E-value: 1.18e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPD--AEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFN 78
Cdd:COG2214 2 PDLKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKalAEELFQRLNEAYEVLSDPERRAEYDRELGQSGKGSAS 81
|
.
gi 123559207 79 R 79
Cdd:COG2214 82 Q 82
|
|
| terminal_TopJ |
NF037946 |
terminal organelle assembly protein TopJ; |
4-103 |
1.46e-25 |
|
terminal organelle assembly protein TopJ;
Pssm-ID: 468284 [Multi-domain] Cd Length: 440 Bit Score: 105.29 E-value: 1.46e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDqmwqhrndpqfnRQFHH 83
Cdd:NF037946 5 RDYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPDAAEIFAEINEAYEVLSNPEKRANYD------------KYGHD 72
|
90 100
....*....|....*....|...
gi 123559207 84 G-DGQSfnAEDFD--DIFSSIFG 103
Cdd:NF037946 73 GvDGEG--GFGFDafDVFSSFFE 93
|
|
| SEC63 |
COG5407 |
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ... |
5-64 |
5.92e-22 |
|
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 444165 [Multi-domain] Cd Length: 61 Bit Score: 86.98 E-value: 5.92e-22
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 123559207 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAE 64
Cdd:COG5407 1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKgDPKAEERFKEINEAYELLSDAEKRAR 61
|
|
| DnaJ |
smart00271 |
DnaJ molecular chaperone homology domain; |
4-61 |
1.26e-21 |
|
DnaJ molecular chaperone homology domain;
Pssm-ID: 197617 [Multi-domain] Cd Length: 60 Bit Score: 86.13 E-value: 1.26e-21
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK--EPDAEARFKEVAEAWEVLSDEQR 61
Cdd:smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPgdKEEAEEKFKEINEAYEVLSDPEK 60
|
|
| PRK14288 |
PRK14288 |
molecular chaperone DnaJ; |
1-290 |
1.39e-21 |
|
molecular chaperone DnaJ;
Pssm-ID: 172776 [Multi-domain] Cd Length: 369 Bit Score: 93.60 E-value: 1.39e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 1 MELKdYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNR 79
Cdd:PRK14288 1 MELS-YYEILEVEKHSNQETIKKSYRKLALKYHPDRNAgDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 80 QFHHGDgqsfNAEDFDDIFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISY------------------ 141
Cdd:PRK14288 80 QSDFSD----FFEDLGSFFEDAFGFGARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVqyqsvcescdgtgakdka 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 142 --NLPVYNAFGMI------------------EQEIPKT----------------LNVKIPAGVGNGQRIRLKGQGTPGEN 185
Cdd:PRK14288 156 leTCKQCNGQGQVfmrqgfmsfaqtcgacqgKGKIIKTpcqackgktyilkdeeIDAIIPEGIDDQNRMVLKNKGNEYEK 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 186 gGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLK-ESILLTIPPGSQAGQRLRVKGKGLVSKKQT 264
Cdd:PRK14288 236 -GKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKgDELELKIPRNARDRQTFAFRNEGVKHPESS 314
|
330 340
....*....|....*....|....*...
gi 123559207 265 --GDLYAVLKIVMPPKPDENTAALWQQL 290
Cdd:PRK14288 315 yrGSLIVELQVIYPKSLNKEQQELLEKL 342
|
|
| PTZ00037 |
PTZ00037 |
DnaJ_C chaperone protein; Provisional |
4-276 |
4.53e-21 |
|
DnaJ_C chaperone protein; Provisional
Pssm-ID: 240236 [Multi-domain] Cd Length: 421 Bit Score: 92.58 E-value: 4.53e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDaeaRFKEVAEAWEVLSDEQRRAEYDqmwqhrndpQFNRQFHH 83
Cdd:PTZ00037 28 EKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPE---KFKEISRAYEVLSDPEKRKIYD---------EYGEEGLE 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 84 GDGQsfnAEDFDDIFSSIFGQHARQSRQRpaaRGHDIEIEVAVFLEETLTEHKRTISYNLPVY-----------NAF--- 149
Cdd:PTZ00037 96 GGEQ---PADASDLFDLIFGGGRKPGGKK---RGEDIVSHLKVTLEQIYNGAMRKLAINKDVIcanceghggpkDAFvdc 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 150 ----------------GMIEQE-------------IP-----------------KTLNVKIPAGVGNGQRIRLKGQGTPG 183
Cdd:PTZ00037 170 klcngqgirvqirqmgSMIHQTqstcnscngqgkiIPeskkckncsgkgvkktrKILEVNIDKGVPNQHKITFHGEADEK 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 184 ENGGPnGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLT-IPPGS--QAGQRLRVKGKGLVS 260
Cdd:PTZ00037 250 PNEIP-GNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVnTPPGEvvKPGDIKVINNEGMPT 328
|
330
....*....|....*....
gi 123559207 261 KKQT---GDLYAVLKIVMP 276
Cdd:PTZ00037 329 YKSPfkkGNLYVTFEVIFP 347
|
|
| DnaJ |
cd06257 |
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ... |
5-58 |
5.77e-21 |
|
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Pssm-ID: 99751 [Multi-domain] Cd Length: 55 Bit Score: 84.13 E-value: 5.77e-21
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 123559207 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDV-SKEPDAEARFKEVAEAWEVLSD 58
Cdd:cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKnPDDPEAEEKFKEINEAYEVLSD 55
|
|
| termin_org_DnaJ |
TIGR03835 |
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ... |
4-101 |
8.92e-18 |
|
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274808 [Multi-domain] Cd Length: 871 Bit Score: 83.71 E-value: 8.92e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQfnrqfhh 83
Cdd:TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGHDGVDRE------- 74
|
90
....*....|....*...
gi 123559207 84 gDGQSFNAEDFDDIFSSI 101
Cdd:TIGR03835 75 -DDFDFQADVFNSFFEEI 91
|
|
| DjlA |
COG1076 |
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones]; |
1-61 |
2.84e-14 |
|
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440694 [Multi-domain] Cd Length: 75 Bit Score: 66.74 E-value: 2.84e-14
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 123559207 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPD--VSKEPD-----AEARFKEVAEAWEVLSDEQR 61
Cdd:COG1076 1 MQLDDAFELLGLPPDADDAELKRAYRKLQREHHPDrlAAGLPEeeqrlALQKAAAINEAYETLKDPRG 68
|
|
| DnaJ_C |
cd10747 |
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 ... |
209-281 |
4.96e-08 |
|
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70.
Pssm-ID: 199909 [Multi-domain] Cd Length: 158 Bit Score: 51.27 E-value: 4.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 209 QDLEIVVPVSPWEAALGA--KVTVPTL------KESILLTIPPGSQAGQRLRVKGKGLVSKK--QTGDLYAVLKIvmppK 278
Cdd:cd10747 1 ADLRYDLELTLEEAYFGKekEIKIPRKvtrvreKKTLTVKIPAGVDDGQRLRLRGEGDAGPNggPPGDLYVVIRV----K 76
|
...
gi 123559207 279 PDE 281
Cdd:cd10747 77 PHP 79
|
|
| ZUO1 |
COG5269 |
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ... |
5-113 |
3.33e-07 |
|
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 227594 [Multi-domain] Cd Length: 379 Bit Score: 51.19 E-value: 3.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 5 DYYAIMGV-----KPTDDlkTIKTAYRRLARKYHPD---VSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQ 76
Cdd:COG5269 44 DLYALLGLskyrtKAIPP--QILKAHKKKVYKYHPDktaAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSNDFDADVPP 121
|
90 100 110
....*....|....*....|....*....|....*..
gi 123559207 77 fnrqfhhgdGQSFNAEDFDDIFSSIFGQHARQSRQRP 113
Cdd:COG5269 122 ---------PRIYTPDEFFEVWEPVFEREARFSKKQP 149
|
|
| djlA |
PRK09430 |
co-chaperone DjlA; |
1-38 |
3.80e-07 |
|
co-chaperone DjlA;
Pssm-ID: 236512 [Multi-domain] Cd Length: 267 Bit Score: 50.20 E-value: 3.80e-07
10 20 30 40
....*....|....*....|....*....|....*....|
gi 123559207 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPD--VSK 38
Cdd:PRK09430 197 PTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDklVAK 236
|
|
| PTZ00341 |
PTZ00341 |
Ring-infected erythrocyte surface antigen; Provisional |
6-67 |
1.05e-06 |
|
Ring-infected erythrocyte surface antigen; Provisional
Pssm-ID: 173534 [Multi-domain] Cd Length: 1136 Bit Score: 50.17 E-value: 1.05e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 123559207 6 YYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQ 67
Cdd:PTZ00341 575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNK 636
|
|
| DnaJ_C |
pfam01556 |
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It ... |
120-273 |
8.83e-05 |
|
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. The two C-terminal domains CTDI and CTDII, both incorporated in this family are necessary for maintaining the J-domains in their specific relative positions. Structural analysis of PDB:1nlt shows that PF00684 is nested within this DnaJ C-terminal region.
Pssm-ID: 460251 [Multi-domain] Cd Length: 213 Bit Score: 42.63 E-value: 8.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 120 IEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGdlwlvihia 199
Cdd:pfam01556 1 LEYELELTLEEAYFGCTKKIKITRNVICDTCGGSGAKPGTSPKTCPCCGGGGQVRRQFGFFSTCTCCPCCG--------- 71
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 123559207 200 phplfdivgqdlEIVVPVSPWEAALGAKVTVPtlKESILLTIPPGSQAGQRLRVKGKGLVSKK--QTGDLYAVLKI 273
Cdd:pfam01556 72 ------------GGGKIIDKCCKCCGGGGVVE--KKTLEVKIPAGVDDGQRIRLRGEGDAGENggPPGDLYVVIRV 133
|
|
| hscB |
TIGR00714 |
Fe-S protein assembly co-chaperone HscB; This model describes the small subunit, Hsc20 (20K ... |
17-65 |
1.93e-04 |
|
Fe-S protein assembly co-chaperone HscB; This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock. [Protein fate, Protein folding and stabilization]
Pssm-ID: 211601 [Multi-domain] Cd Length: 155 Bit Score: 41.02 E-value: 1.93e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 123559207 17 DLKTIKTAYRRLARKYHPDVSK----EPDAEARFKEVAEAWEVLSDEQRRAEY 65
Cdd:TIGR00714 4 DQSRLRKRYRQLQAQYHPDASGmaqeQLAASQQSTTLNQAYHTLKDPLRRAEY 56
|
|
| hscB |
PRK00294 |
co-chaperone HscB; Provisional |
6-65 |
6.14e-03 |
|
co-chaperone HscB; Provisional
Pssm-ID: 166894 [Multi-domain] Cd Length: 173 Bit Score: 36.75 E-value: 6.14e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123559207 6 YYAIMGVKPTD--DLKTIKTAYRRLARKYHPDvsKEPDAEARFKEVA--------EAWEVLSDEQRRAEY 65
Cdd:PRK00294 6 HFALFDLQPSFrlDLDQLATRYRELAREVHPD--RFADAPEREQRLAlersaslnEAYQTLKSPPRRARY 73
|
|
| |
