|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-695 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1417.73 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 1 WIIPFIPLPVPILIGAGLILFPTATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFSQYVWSWIINNDFSLDFGYL 80
Cdd:CHL00025 9 WIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINNDFSLEFGYL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 81 IDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTR 160
Cdd:CHL00025 89 IDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 161 PVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNFLFVTLCAVLLFVGAVAKSAQFPLHV 240
Cdd:CHL00025 169 PIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHV 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 241 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLG 320
Cdd:CHL00025 249 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLG 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 321 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGI 400
Cdd:CHL00025 329 YMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGI 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 401 PPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNVHFQNYGGKHKTPFYSISLWGKNG---IK 477
Cdd:CHL00025 409 PPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWGKEEskkIN 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 478 KNSCLLTMNNNESTYFFSKTKYPIDKNERKMTRPFMTiaHFERKAVYSYPYESDNTMLFPIFVLGLFTLFVGSIGIPFNQ 557
Cdd:CHL00025 489 KLLLLLTMNNNERVSFFSKKTYKIDGNVRNMIRSFIT--IFGNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQ 566
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 558 DGVNLDILSKWLAPSINLLHQKSNNSMDWNEFLKDAVLSVSIAYFGIFIASFLYKPIYSSLKNLELINFFVKKGPKRILW 637
Cdd:CHL00025 567 EGIDLDILSKWLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINSFVKGGPKRIFL 646
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*...
gi 3914186 638 DKIINGIYDWSYNRAYIDAFYTRFLVGGIRGLAEFTHFFDRRVIDGMTNGVGVISFIV 695
Cdd:CHL00025 647 DKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITSFFV 704
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-692 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 687.14 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 1 WIIPFIPLPVPILIGAGLILFPTATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFSQYVWSWIINNDFSLDFGYL 80
Cdd:PRK07376 9 WLIPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGDFHLPMGYV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 81 IDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTR 160
Cdd:PRK07376 89 IDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 161 PVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNFLFVTLCAVLLFVGAVAKSAQFPLHV 240
Cdd:PRK07376 169 KGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHV 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 241 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLG 320
Cdd:PRK07376 249 WLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLG 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 321 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGI 400
Cdd:PRK07376 329 YMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGI 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 401 PPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGhlnvhfqnyggkhktpfysiSLWGKNGIKKNS 480
Cdd:PRK07376 409 PPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEG--------------------EFRGNDKELQKE 468
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 481 CLLTMNNNESTYFFSKtkypidknerkmtrpfmtiAHFERKAVYSYPYESDNTMLFPIFVLGLFTLFVGSIGIPFNqdgv 560
Cdd:PRK07376 469 LLAAADAPGHHEGHHE-------------------EHGEHHHHSGSPHESPWTMTLPLVVLAVPSVLIGLLGTPWN---- 525
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 561 nlDILSKWLAPSINLLHQKSNnsMDWNEFLKDAVLSVSIAYFGIFIASFLYkpiyssLKNLELINFFVKKGPKrilwdki 640
Cdd:PRK07376 526 --NRFEAFLHAPGEALEAAAH--FEWGEFLILAGASVGIALIGITLASLMY------LLKKIDPAAIAERFPP------- 588
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|..
gi 3914186 641 ingIYDWSYNRAYIDAFYTRFLVGGIRGLAEFTHFFDRRVIDGMTNGVGVIS 692
Cdd:PRK07376 589 ---LYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTGLVT 637
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-692 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 562.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 1 WIIPFIPLpvpiligAGLILFPTATKSFRRMWAFQ-SVLLLSIVMIFSIYLsIQQINSSSFSQYVWSWIINNDFSLDFGY 79
Cdd:COG1009 5 WLIPLLPL-------LGALLAGLLGRRLGRRAAGWlAALAPLAAFVLSLLL-FPAVLGGEVVVELYTWIPVGSLGLDFGF 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 80 LIDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFT 159
Cdd:COG1009 77 RLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYE 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 160 RPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIynnevNFLFVTLCAVLLFVGAVAKSAQFPLH 239
Cdd:COG1009 157 KPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIL-----SSPLLTLILLLLLLGAFGKSAQFPLH 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 240 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQL 319
Cdd:COG1009 232 FWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQL 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 320 GYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRKHVPITKITFLLGTLSLCG 399
Cdd:COG1009 312 GYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATGT---------RDIRKMGGLRKKMPITAITFLIGALSLAG 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 400 IPPLACFWSKDEILNDSW---LYSPIFAIIAWATAGLTAFYMFRIYLLTFeghlnvhfqnyggkhktpfysislWGKngi 476
Cdd:COG1009 383 IPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVF------------------------FGK--- 435
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 477 kknsclltmnnnestyffsktkypidknerkmtrpfmtiahfERKAVYSYPYESDNTMLFPIFVLGLFTLFVGSIGIPFn 556
Cdd:COG1009 436 ------------------------------------------PRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGL- 472
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 557 qdgvnldiLSKWLAPS------INLLHqksnnsmdwNEFLKDAVLSVSIAyfGIFIASFLYkpiysslknlelinffvKK 630
Cdd:COG1009 473 --------LEGLLAPAavlggeLHLAH---------GLLLNALPLLLSLL--GIALGYLLY-----------------LK 516
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 3914186 631 GPKRILWDKiINGIYDWSYNRAYIDAFYTRFLVGGIRGLAEFThFFDRRVIDGMTNGVGVIS 692
Cdd:COG1009 517 RPLPALAER-LKPLYRLLANKWYFDELYDALFVKPVRALARFL-WFDRYVIDGIVNGLARLT 576
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-691 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 559.39 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 1 WIIPFIPLpvpilIGAGLILFptatksFRRMW-----AFQSVLLLSIVMIFSIYLSIQQINSS--SFSQYVWSWIINNDF 73
Cdd:PRK06590 6 WLIVLLPL-----IGALILGL------FGRRIgekwaHLVGTGLVGLSALLSLVVFFDFLLGGgrAFSQTLWTWISVGDF 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 74 SLDFGYLIDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLL 153
Cdd:PRK06590 75 DVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 154 IGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRdlfEIFNNLIYNNEVNFLFVTLCAVLLFVGAVAKS 233
Cdd:PRK06590 155 IGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYD---EVFAAAPQFFGLGWSALTLICLLLFIGAMGKS 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 234 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAY 313
Cdd:PRK06590 232 AQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAY 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 314 STMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEtivgyspaKSQNMGLMGGLRKHVPITKITFLLG 393
Cdd:PRK06590 312 STMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH--------HEQDIRKMGGLRKKMPVTYATFLIG 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 394 TLSLCGIPPLACFWSKDEILNDSWLYSPIFA-IIAWATAGLTAFYMFRIYLLTFEGhlnvhfqnyggkhktpfysislwg 472
Cdd:PRK06590 384 TLALIGIPPFAGFFSKDEILEAAFANGHINLfVAGLVGAFLTAFYSFRLIFLVFHG------------------------ 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 473 kngikknsclltmnnnestyffsktkypidknerkmtrpfmtiahfERKAVYSYPYESDNTMLFPIFVLGLFTLFVGSIG 552
Cdd:PRK06590 440 ----------------------------------------------KEKEKIHHPHESPAVMTLPLIVLAVLSVFAGALI 473
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 553 IPFnqdgvnldiLSKWLAPSINLLHQKSNNSmdwnEFLKDAVLSVSIAYFGIFIASFLYkpiyssLKNLELINFFVKKGP 632
Cdd:PRK06590 474 VPP---------FLGVLPLTTELAHGEAEHH----LPVWVALLPLVVALAGIALAWLLY------LKKPTLPTSIAAPGR 534
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 633 krilwdkiinGIYDWSYNRAYIDAFYTRFLVGGIRGLAEFT-HFFDRRVIDGMTNGVGVI 691
Cdd:PRK06590 535 ----------FLYTLLRNKYYFDELYEKVFVKPGLALARLLwKDGDDGIIDGLVPNSARL 584
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
1-695 |
1.40e-165 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 489.10 E-value: 1.40e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 1 WIIPFIPLpvpilIGAgLILFPTATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSS---FSQYVWSWIINNDFSLDF 77
Cdd:TIGR01974 4 FLIVFLPL-----IGF-LIAGLFGRRIGERVSGIIGIGSVGLSAALSAFVFVDFFLNGEgeaFTQSLFPWISVGGFQVDF 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 78 GYLIDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFW 157
Cdd:TIGR01974 78 GLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 158 FTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNnevnflFVTLCAVLLFVGAVAKSAQFP 237
Cdd:TIGR01974 158 YKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPGAFFS------ALTLICLLLFIGAMGKSAQLP 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 238 LHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMS 317
Cdd:TIGR01974 232 LHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMS 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 318 QLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEtivgyspaKSQNMGLMGGLRKHVPITKITFLLGTLSL 397
Cdd:TIGR01974 312 QLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLAL 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 398 CGIPPLACFWSKDEILNDSW--LYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHlnvhfqnyggkhktpfysislwgkng 475
Cdd:TIGR01974 384 IGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGK-------------------------- 437
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 476 ikknsclltmnnnestyffsktkypidknerkmtrpfmtiahfERKAVYSYPYESDNTMLFPIFVLGLFTLFVGSIGIPF 555
Cdd:TIGR01974 438 -------------------------------------------ERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPL 474
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 556 NQdgvnldilskWLAPSinLLHQKSNNSMDWNEFLKDAVLSVSIAYFGIFIASFLYkpiyssLKNLELinffvkkgPKRI 635
Cdd:TIGR01974 475 FE----------FLKGV--LPTSAEPALEHHHVPALEIWSPTAVAILGILLAYLLY------LGNPTL--------PAKI 528
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 3914186 636 lwDKIINGIYDWSYNRAYIDAFYTRFLVGGIRGLAEFTHFF-DRRVIDGMTNGVGVISFIV 695
Cdd:TIGR01974 529 --AQRHSGLYRLLLNKWYFDELYDKVFVKPYLFLGKLLWKDpDDKIIDGFGPGIARLVGAI 587
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
440-677 |
9.49e-150 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 434.35 E-value: 9.49e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 440 RIYLLTFEGHLNVHFQNYGGKHKTPFYSISLWGKNG---IKKNSC---LLTMNNNESTYFFSKTKYPIDKNERKMTRPFM 513
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGsklINKNFRtllLLTMNNNEKVSFFSKKTYRIDGNVRNMTRPFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 514 TIAHFERKAVYSYPYESDNTMLFPIFVLGLFTLFVGSIGIPFNQDGVNLDILSKWLAPSINLLHQKSNNSMDWNEFLKDA 593
Cdd:pfam01010 81 TITHFDNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNSNNSVDWYEFVTNA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 594 VLSVSIAYFGIFIASFLYKPIYSSLKNLELINFFVKKGPKRILWDKIINGIYDWSYNRAYIDAFYTRFLVGGIRGLAEFT 673
Cdd:pfam01010 161 IFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLAELT 240
|
....
gi 3914186 674 HFFD 677
Cdd:pfam01010 241 HFFD 244
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
39-446 |
1.49e-111 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 349.76 E-value: 1.49e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 39 LLSIVMIFSIYLSIQQINSSSFSQY-VWSWIINNDFSLDFGYLIDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRFF 117
Cdd:MTH00020 35 CLIISLSWSFLIFYEILFNSSTTYIkLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFM 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 118 AYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEF 197
Cdd:MTH00020 115 SYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDF 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 198 RDLFEIFNNLIYNNevnflfVTLCAVLLFVGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFR 277
Cdd:MTH00020 195 SSVFNMVVSAPSSD------ITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFE 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 278 VIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIH 357
Cdd:MTH00020 269 QAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIH 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 358 SMetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWL-YSPIFAI-IAWATAGLTA 435
Cdd:MTH00020 349 AL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGqYYLIFAYwLGCFSALLTA 420
|
410
....*....|.
gi 3914186 436 FYMFRIYLLTF 446
Cdd:MTH00020 421 FYSIRLIYLTF 431
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
55-466 |
3.24e-111 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 348.92 E-value: 3.24e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 55 INSSSFSQYVWSWIINNDFSLDFGYLIDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSS 134
Cdd:MTH00210 52 LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 135 NLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVn 214
Cdd:MTH00210 132 NYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESL- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 215 flfvTLCAVLLFVGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITV 294
Cdd:MTH00210 211 ----TIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 295 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMetivgyspAKSQNMG 374
Cdd:MTH00210 287 FFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV--------SDEQDMR 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 375 LMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSW-LYSPIFAI-IAWATAGLTAFYMFRIYLLTFEGHLNV 452
Cdd:MTH00210 359 KMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdKYYIAFAYwLGSFSALLTAFYSIRLIYLTFITNTNS 438
|
410
....*....|....
gi 3914186 453 HFQNYGGKHKTPFY 466
Cdd:MTH00210 439 KKEVFIGVHESSWN 452
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
18-452 |
2.47e-92 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 298.79 E-value: 2.47e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 18 LILFPTATKSFRR-MWAFQSVLLLSIVMIFSIYLSIQQINSSSFSQyvWSWIINNDFSLDFGYLIDPLTSIM**LITTVG 96
Cdd:MTH00211 15 LLLLPLLLPLNNSkLHIKKAVKLSFFISLIPLLIFLDQGLETILTN--WSWINLGLFSLNLSFKFDFYSIFFTSVALYVT 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 97 IMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRV 176
Cdd:MTH00211 93 WSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRI 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 177 GDFGLLLGILGFYWITGSFEFRDLFeifnnliynneVNFLFVTLCAVLLFVGAVAKSAQFPLHVWLPDAMEGPTPISALI 256
Cdd:MTH00211 173 GDIGLLLSMVWLLLNLNSWEISQLF-----------ILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 257 HAATMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALF 336
Cdd:MTH00211 242 HSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFL 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 337 HLITHAYSKALLFLGSGSIIHSMETIvgyspaksQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEIL--- 413
Cdd:MTH00211 322 HICTHAFFKAMLFMCSGSIIHGLNNE--------QDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILesm 393
|
410 420 430
....*....|....*....|....*....|....*....
gi 3914186 414 NDSWLYSPIFAIIAWATaGLTAFYMFRIYLLTFEGHLNV 452
Cdd:MTH00211 394 NGSYLNAWALLLTLLAT-SLTAAYSFRLIFLSLGGYPRF 431
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
133-432 |
1.96e-86 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 273.42 E-value: 1.96e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 133 SSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNE 212
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 213 VNFLFvtlcaVLLFVGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF-RVIPYIMYLISIIG 290
Cdd:pfam00361 81 LLLLF-----LLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 291 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSIIHSMEtivgysp 367
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV------- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 3914186 368 aKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAG 432
Cdd:pfam00361 228 -HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
55-413 |
1.11e-85 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 283.39 E-value: 1.11e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 55 INSSSFSQYVWSWIINNDFSLDFGYLIDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSS 134
Cdd:MTH00032 52 INDAVVHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 135 NLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDL------FEIFNNLI 208
Cdd:MTH00032 132 NYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgSGIMDRGY 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 209 YNNEVNFL----FVTLcAVLLFVGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMY 284
Cdd:MTH00032 212 YGGGAYESplapFAII-GILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLL 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 285 LISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM-GSYRSALFHLITHAYSKALLFLGSGSIIHSMETiv 363
Cdd:MTH00032 291 IITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV-- 368
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 3914186 364 gyspaKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEIL 413
Cdd:MTH00032 369 -----DEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
36-446 |
3.76e-82 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 272.61 E-value: 3.76e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 36 SVLLLSIVMIFSIYLSIQQINSSSFSqyvwsWIINNDFSLDFGYLIDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLR 115
Cdd:MTH00208 65 LAFLSLINLLIWILLGCPNINISLSN-----WLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNA 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 116 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSF 195
Cdd:MTH00208 140 FFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSW 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 196 efrDLFEIFnnliYNNEVNFLFVTLCAVLLFVGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 275
Cdd:MTH00208 220 ---NLNEIL----SLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPL 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 276 FRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSI 355
Cdd:MTH00208 293 ISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSI 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 356 IHSMEtivgyspaKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEIL-----NDSWLYSPIFAIIAwat 430
Cdd:MTH00208 373 IHSLN--------NEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILeaglaSISNLLSIILALIA--- 441
|
410
....*....|....*.
gi 3914186 431 AGLTAFYMFRIYLLTF 446
Cdd:MTH00208 442 TLLTAVYSFRIIFFCF 457
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
1-693 |
9.44e-82 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 271.40 E-value: 9.44e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 1 WIIPFIPLpvpilIGAGLILfPTATKSFRRMW----AFQSVLLLSIVMIFSIyLSIQQINSSSFSQYVWSWIINNDFSLD 76
Cdd:PRK07390 10 WLIPLYGL-----IGALLSL-PWSPGIIRRTGprpaAYLNLLMTLLAFVHSL-LALRAIWNQPPQQLSFPWLQVADLDLS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 77 FGYLIDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGF 156
Cdd:PRK07390 83 LSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGF 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 157 WFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNnliyNNEVNFLFVTLCAVLLFVGAVAKSAQF 236
Cdd:PRK07390 163 WYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAA----TANLDPLTATLLGLALIAGPTGKCAQF 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 237 PLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTM 316
Cdd:PRK07390 239 PLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTS 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 317 SQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIhsMETIvgyspakSQNMGLMGGLRKHVPITKITFLLGTLS 396
Cdd:PRK07390 318 AYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSII--LTTI-------TQDLTELGGLWSRMPATTLAFLVGSAG 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 397 LCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFeghlnvhfqnyGGKHKtpfysislwgkngi 476
Cdd:PRK07390 389 LVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVF-----------LGKPQ-------------- 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 477 kknsclltmnnnestyffsktkypidknerKMTRpfmtiahfeRKAVYSYPyesdntMLFPIFVLGLFTLFVgsigiPFn 556
Cdd:PRK07390 444 ------------------------------QKTR---------RSPEVLWP------MALPMVILAGFTLHL-----PL- 472
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 557 qdgvnldILSKWlapsiNLLhqksnnsMDWNEFLKDAVLSVSIA-YFGIFIASFLY------KPIYSSLKNLEliNFFVk 629
Cdd:PRK07390 473 -------LLQQW-----GLL-------PSWEALNLWAAPLLVASgLLGVLLGAWIYlnkawsRPIQLPLRFLQ--DLLA- 530
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 3914186 630 kgpkrilwdkiingiYDWsynraYIDAFYTRFLVGGIRGLAEFTHFFDRRVIDGMTNGVGVISF 693
Cdd:PRK07390 531 ---------------YDF-----YTDRLYRLTIVFVVALISRLTAWFDRYVVDGLVNLVGLATL 574
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
42-449 |
6.27e-81 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 268.96 E-value: 6.27e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 42 IVMIFSIYLSIQQINSSsfsqyvWSWIINNDFSLDFGYLIDPLtSIM**---LITTVGIMVliYSDNYMAHDQGYLRFFA 118
Cdd:MTH00004 49 IPLTLFLNSGTESITTN------WPWIFTTTFNIPISFKLDQY-SLMFLpiaLFVTWSILE--FSTWYMASDPHITKFFK 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 119 YMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFR 198
Cdd:MTH00004 120 YLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQ 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 199 DLFeifnnliYNNEVNflfvTLCAVLLFVGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRV 278
Cdd:MTH00004 200 QLF-------SPTQTP----TLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQN 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 279 IPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHS 358
Cdd:MTH00004 269 NQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHN 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 359 MetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKD---EILNDSWLYSPIFAIIAWATAgLTA 435
Cdd:MTH00004 349 L--------NNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDtiiETLNTSYLNAWALLLTLLATS-FTA 419
|
410
....*....|....
gi 3914186 436 FYMFRIYLLTFEGH 449
Cdd:MTH00004 420 AYSLRMILLVQTGF 433
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
3-442 |
6.91e-79 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 258.15 E-value: 6.91e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 3 IPFIPLPVPI-LIGAGLILFPTATKSFRRMWAFQSVLLLSIVmifSIYLSIQQINSSSFSQYVWSWIinndFSLDFGYLI 81
Cdd:COG0651 2 SHLLILPVLLpLLAAALLLLLGRRRRLQRALSLLASLALLAL---ALALLLQVLAGGPLVYALGGWP----APFGIVLVA 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 82 DPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRP 161
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 162 vAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFnnliynNEVNFLFVTLCAVLLFVGAVAKSAQFPLHVW 241
Cdd:COG0651 155 -ALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARL------AELDPGLLLAAFALLLVGFGIKAALFPLHFW 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 242 LPDAM-EGPTPISALIHAAtMVAAGIFLVARLLPLF---RVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMS 317
Cdd:COG0651 228 LPDAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVS 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 318 QLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRKHVPITKITFLLGT 394
Cdd:COG0651 307 QIGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERA---------TGTRDLDKLGGLGKRMPLTAAAFLIGA 377
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 3914186 395 LSLCGIPPLACFWSKDEILNDSW-LYSPIFAIIAWATAGLTAFYMFRIY 442
Cdd:COG0651 378 LALAGLPPLSGFVSKWLLLQAALeAGAWLLAAVLLLSSLLTLAYFVRIF 426
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
65-441 |
2.81e-78 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 261.77 E-value: 2.81e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 65 WSWIINNDFSLDFGYLIDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWE 144
Cdd:MTH00066 64 FHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWE 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 145 LVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnnLIYNNEvnflfvTLCAVL 224
Cdd:MTH00066 144 GVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIF-----LLNDNS------TLPLLG 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 225 LFVGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQ 304
Cdd:MTH00066 213 LILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQ 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 305 KDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMetivgyspAKSQNMGLMGGLRKHVP 384
Cdd:MTH00066 293 NDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQKALP 364
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 385 ITKITFLLGTLSLCGIPPLACFWSKDEI---LNDSWLYSPIFAIIAWATAgLTAFYMFRI 441
Cdd:MTH00066 365 ITTSCLTIGSLALTGTPFLAGFFSKDAIieaMNTSNLNSWALILTLIATS-FTAVYSFRI 423
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
65-444 |
6.15e-78 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 264.47 E-value: 6.15e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 65 WSWIinNDFSLDFGYLIDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWE 144
Cdd:PRK12647 48 YAWV--PSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWE 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 145 LVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEiFNNLIYNNEvnflFVTLCAVL 224
Cdd:PRK12647 126 LTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREHP----LYLAILLL 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 225 LFVGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQ 304
Cdd:PRK12647 201 VLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQ 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 305 KDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRK 381
Cdd:PRK12647 281 TDLKLILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE---------TGTRDITKLGGLRR 351
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 3914186 382 HVPITKITFLLGTLSLCGIPPLACFWSKDEILnDSWLYSPIFAIIAWATAGLTAFYMFRIYLL 444
Cdd:PRK12647 352 AMPITAAAALLAALSMAGLPPLFGFLAKELIY-EALLEAPLWSLILTVAAVLGNALMVAVAFL 413
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
106-441 |
9.23e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 247.05 E-value: 9.23e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 106 YMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLllgI 185
Cdd:MTH00137 111 YMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---I 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 186 LGFYWI---TGSFEFRDLFEIFNNLIynnevnflfVTLCAVLLFVGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMV 262
Cdd:MTH00137 188 LAMAWMatnLNSWEIQQIFALSKDFD---------LTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMV 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 263 AAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHA 342
Cdd:MTH00137 259 VAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHA 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 343 YSKALLFLGSGSIIHSMEtivgyspaKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEI---LNDSWLY 419
Cdd:MTH00137 339 FFKAMLFLCSGSIIHSLN--------DEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLN 410
|
330 340
....*....|....*....|....*...
gi 3914186 420 spifaiiAWATA------GLTAFYMFRI 441
Cdd:MTH00137 411 -------AWALTltliatSFTAVYSLRV 431
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
2-449 |
1.43e-72 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 251.00 E-value: 1.43e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 2 IIPFIPLPVPILIgaglilfPTATKSFRRMWAFQSVLLLSIVmIFSIYLS-IQQINSSSFSQYVWSWIINndFSLDFGYL 80
Cdd:PRK12645 6 IAILLPFIFALLI-------PFLYKYFKRIHTGWFVLPVPVV-LFIYFLSlIPTTMSGNTVMKTLPWIPS--LGINFTLY 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 81 IDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFT 159
Cdd:PRK12645 76 VDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYE 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 160 RPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLiynneVNFLFVTLCAVLLFVGAVAKSAQFPLH 239
Cdd:PRK12645 156 REASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANADEI-----QNSPLFIPAMILILLGAFTKSAQFPFY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 240 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQL 319
Cdd:PRK12645 231 IWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 320 GYMMLALGMGS----------------YRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRKHV 383
Cdd:PRK12645 311 GLIMSLLGIGAaslhyqgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHETGT---------RDIRKLGGLMTIM 381
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 3914186 384 PITKITFLLGTLSLCGIPPLACFWSKDEILN-------------DSWLYspIFAIIAWATAGLTAFYMFRIYLLTFEGH 449
Cdd:PRK12645 382 PITFTIALIGALSMAGLPPFNGFLSKEMFFEsmlnateanlfslDTWGV--LFPVIAWVASVFTFVYSIIFIFKTFFGK 458
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
19-448 |
4.48e-71 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 246.68 E-value: 4.48e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 19 ILFPTATKSFRRMWAFQSVLLLSIVmIFSIYLSIQQINSS-SFSQYVWSWIinNDFSLDFGYLIDPLTSIM**LITTVGI 97
Cdd:TIGR00940 13 SLIPILYPSDQRIHIGWFVLAIPLV-CFLYTLGLYPYTASgGVLHYTIDWV--PELGLNFTLYMDGLALLFSLLITGIGV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 98 MVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVG 177
Cdd:TIGR00940 90 LVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 178 DFGLLLGILGFYWITGSFEFRDLFEIFNNLIynNEVNFLFVTlcaVLLFVGAVAKSAQFPLHVWLPDAMEGPTPISALIH 257
Cdd:TIGR00940 170 GLAMLGGLILLGKITGSFSIDAVIASADAIR--NSPLFGTAM---VLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLH 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 258 AATMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS------- 330
Cdd:TIGR00940 245 SATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSpsyhyqg 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 331 ---------YRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRKHVPITKITFLLGTLSLCGIP 401
Cdd:TIGR00940 325 ddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHETGT---------RDIRKLGGLFHIMPITFTLAMIASAAMAGVP 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 402 PLACFWSKDEILN-------------DSWLYspIFAIIAWATAGLTAFYMFRIYLLTFEG 448
Cdd:TIGR00940 396 PFNGFLSKEMFFAeaitahlvnpfdtVTLGY--LFPYVATVASVFTFVYSLRFIHGVFFG 453
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
63-440 |
2.18e-70 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 247.53 E-value: 2.18e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 63 YVWSWIinNDFSLDFGYLIDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYI 141
Cdd:PRK12644 56 EVVPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 142 FWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnnliyNNEVNFLFVTLC 221
Cdd:PRK12644 134 FWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELL--------ADPPTGPAVSVA 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 222 AVLLFVGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLA 301
Cdd:PRK12644 206 VVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRA 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 302 LAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHL---ITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGG 378
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHSTGT---------RDIRKLSG 356
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 3914186 379 LRKHVPITKITFLLGTLSLCGIPPLACFWSK----DEILNDSWLYSPIFAIIAWATAG--LTAFYMFR 440
Cdd:PRK12644 357 LGRRQPVLAVVAALAAASMAGLPPLLGFVAKeaalEAVLHDGALGPAGPVVLAGIVLGsiLTVAYSLR 424
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
13-426 |
2.70e-70 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 236.79 E-value: 2.70e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 13 LIGAGLILFptatkSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFSQYVWSWIINNdfSLDFGYLIDPLTSIM**LI 92
Cdd:PRK06525 12 FIGALVVFF-----LPGRRAAELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNLGD--VALFGLVIDPVSVLIGFVV 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 93 TTVGIMVLIYSDNYMA-------HDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTrPVAAN 165
Cdd:PRK06525 85 VLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQS-PKALR 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 166 ACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLiynnevnflfVTLCAVLLFVGAVAKSAQFPLHVWLPDA 245
Cdd:PRK06525 164 SALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSL----------KYLVFLGILFAAWGKSAQLPFYSWLPDA 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 246 MEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPY-IMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMML 324
Cdd:PRK06525 234 MEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHvIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFF 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 325 ALGMGSYRS------ALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRKHVPITKITFLLGTLSLC 398
Cdd:PRK06525 314 GLSLAILGSrlalegSIAYIFNHAFAKSLFFLVAGALSYSCGT---------RLLPRLRGVLKKLPLVGVGFCVAALAIT 384
|
410 420
....*....|....*....|....*...
gi 3914186 399 GIPPLACFWSKDEILNDSWLYSPIFAII 426
Cdd:PRK06525 385 GVPPFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
31-449 |
9.68e-70 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 238.60 E-value: 9.68e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 31 MWAFQSVLLLSIVM-IFSIYLSIQQIN-SSSFSQYV-----------------------------WSWIINNDFSLDFGY 79
Cdd:MTH00108 1 MNLFTSSTLLTLLIlTLPIIMTLTNPYkTNNYPLYVkttisyafiisliptmmfihsgqemiisnWHWMTIQTLKLSLSF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 80 LIDpLTSIM**---LITTVGIMVliYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGF 156
Cdd:MTH00108 81 KLD-YFSMIFIpvaLFVTWSIME--FSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 157 WFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIynnevnflfvTLCAVLLFVGAVAKSAQF 236
Cdd:MTH00108 158 WYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNS----------NLPLMGLLLAATGKSAQF 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 237 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTM 316
Cdd:MTH00108 228 GLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTS 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 317 SQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEtivgyspaKSQNMGLMGGLRKHVPITKITFLLGTLS 396
Cdd:MTH00108 308 SQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLN--------DEQDIRKMGGLFKTLPFTSTALIIGSLA 379
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 3914186 397 LCGIPPLACFWSKD---EILNDSWLYSPIFAIIAWATAgLTAFYMFRIYLLTFEGH 449
Cdd:MTH00108 380 LTGMPFLTGFYSKDliiEAANTSYTNAWALLITLIATS-LTAAYSTRIIFFALLGQ 434
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
2-440 |
3.33e-68 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 240.86 E-value: 3.33e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 2 IIPFIPLpvpilIGAgliLFPTATKSFRRM---WAFQSVLLLSIVMIFSIYlsiQQINSSSFSQYVWSWIinNDFSLDFG 78
Cdd:PRK12648 5 LLVLLPF-----LGA---LLAALLPRNARNaeaWLAGLVALAALVLLALLY---PAVAAGEVIRAEIEWL--PALGLNLS 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 79 YLIDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWF 158
Cdd:PRK12648 72 LRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWH 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 159 TRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFefrDLFEIFNN--LIYNNEvnfLFV-TLCAVLLfvGAVAKSAQ 235
Cdd:PRK12648 152 HRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSY---DLDVVLAAgdLIRAHP---LYPpALVLILL--GAFTKSAQ 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 236 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYST 315
Cdd:PRK12648 224 FPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYST 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 316 MSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHsmETivgyspaKSQNMGLMGGLRKHVPITKITFLL 392
Cdd:PRK12648 304 ISHLGLITLLLGLGSPLAavaAIFHIINHATFKASLFMAAGIIDH--ET-------GTRDMRRLSGLRRLMPITATLAMV 374
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 3914186 393 GTLSLCGIPPLACFWSK----DEILNDSWLYSPIFAIIAWATAG--LTAFYMFR 440
Cdd:PRK12648 375 AAAAMAGVPLLNGFLSKemffAETLDTHLLGSLDWLLPVAATLAgaFSVAYSLR 428
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
75-444 |
9.22e-67 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 234.72 E-value: 9.22e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 75 LDFGYLIDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLI 154
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 155 GFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEifNNLIYNNEVNFLFVTLCAVLLFVGAVAKSA 234
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQ--DSELIENIKGHPLFLITLILIFIGAAAKSA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 235 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYS 314
Cdd:PRK12649 230 QGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 315 TMSQLGYMMLALGMGSYR-------SALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRKHVPITK 387
Cdd:PRK12649 310 TISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHE---------AATRDIRKLGGLRKEMPITF 380
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 3914186 388 ITFLLGTLSLCGIPPLACFWSKDEILNDSW----LYSPIFAII--AWATAGLTAFYMFRIYLL 444
Cdd:PRK12649 381 IVASIAALAMAGIPPLNGFLSKEMFYETSVemgaLIGGPFTIIipAVAVLGGVFTFAYSIKLI 443
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
18-451 |
3.16e-65 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 230.41 E-value: 3.16e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 18 LILFPTATKSFRRMWAFQSVLLLSIVMIFSIYlSIQQINSSSFSQYVWSWIINNDFSLDFgyLIDPLTSIM**LITTVGI 97
Cdd:PRK12646 16 MILLTSKRRALAKYAGYIALVAPIISSIYFLI-QIPSVAKLQYLSTSIPWMKTLDINLDL--RLDGLSLMFSLIISLIGI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 98 MVLIYSDNYMAHDQGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRV 176
Cdd:PRK12646 93 AVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVF 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 177 GDFGLLLGILGFYWITGSFEFRDLFEIFNNLiyNNEVNFLFVTLCavlLFVGAVAKSAQFPLHVWLPDAMEGPTPISALI 256
Cdd:PRK12646 173 GGLALLVGFIMLYIMTGTNNITEILGQADHI--KNHGLFIPMIFM---FLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 257 HAATMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG------- 329
Cdd:PRK12646 248 HSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaqhq 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 330 ----------SYRSALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCG 399
Cdd:PRK12646 328 qdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHE---------AGTRDIRILSGMRQLFPKMNLVMTIAALSMAG 398
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 3914186 400 IPPLACFWSKD----------EILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLN 451
Cdd:PRK12646 399 VPFLNGFLSKEmfldaltqtgQLSQFSLISMIIIVFIGVIASIFTFTYALYMVKEVFWGKYD 460
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
34-451 |
9.89e-60 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 210.77 E-value: 9.89e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 34 FQSVLLLSIVMIFSIYLSIQQINSSSFSQYVWSWIINNDFSLDFGYLIDPLTSIM**LITTVGIMVLIYSDNYMAHDQGY 113
Cdd:MTH00165 5 LISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 114 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIgFWFTRPVAANACQKAFVTNRVGDFGLLLGIlGFYWITG 193
Cdd:MTH00165 85 NRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSI-AWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 194 SFEFrdlfeIFNNLIYNNEVNFLFVTLcavLLFVGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 273
Cdd:MTH00165 163 SWNF-----IFYLDFMKNSFEMLLIGL---LIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 274 PLFrVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSG 353
Cdd:MTH00165 235 NLL-FSSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 354 SIIHSMETivgyspakSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKD---EILNDSWLYSPIFAIIAWAT 430
Cdd:MTH00165 314 SIIHNMSN--------SQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDlilEMVSMSNLNFFIFFLFFFST 385
|
410 420
....*....|....*....|.
gi 3914186 431 aGLTAFYMFRIYLLTFEGHLN 451
Cdd:MTH00165 386 -GLTVSYSFRLIYYSMSGDFN 405
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
37-451 |
3.15e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 209.12 E-value: 3.15e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 37 VLLLSIVMIFSIYLSIQQINSSSFSQYVWSWIINNDFSLDFGYLIDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRF 116
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 117 FAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPvAANACQKAFVTNRVGDFGLLLGILGFYwitgsfe 196
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSK-SLSAGMLTALTNRVGDALLILSIAWML------- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 197 frdlfeIFNNL-IYNNEVNFLFVTLCAVLLFVGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 275
Cdd:MTH00209 158 ------MHGNWnIFYLNFNSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPS 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 276 FRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSI 355
Cdd:MTH00209 232 LFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNI 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 356 IHSMetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILnDSWLYSP---IFAIIAWATAG 432
Cdd:MTH00209 312 IHSH--------GHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL-ESMLESNmpiMTLILMFLSTS 382
|
410
....*....|....*....
gi 3914186 433 LTAFYMFRIYLLTFEGHLN 451
Cdd:MTH00209 383 LTAAYSMRLSYFSLWGPNS 401
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
10-451 |
7.00e-57 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 201.08 E-value: 7.00e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 10 VPILIGAGLILFPTATKSFRRMWAFqsvLLLSIVMIFSIYLSIQQINSSSFSQYV--WSWIinNDFSLDFGYLIDPLTSI 87
Cdd:COG1008 12 LPLLGALLLLLLPRRNARLARWVAL---AVSLLTLLLSLYLLAGFDPGTGGFQFVesYPWI--PSLGISYHLGVDGISLP 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 88 M**LITTVGIMVLIYSDNYMAHDQGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFW--FTRPVAAN 165
Cdd:COG1008 87 LVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIYAAI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 166 acqKAFVTNRVGDFGLLLGILGFYWITGSFEFrDLFEIFNNLIYNNEVNFLFVtlcavLLFVGAVAKSAQFPLHVWLPDA 245
Cdd:COG1008 165 ---KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAQLLLFL-----AFFIAFAVKVPMFPFHTWLPDA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 246 -MEGPTPISAlIHAATMVAAGIFLVARL-LPLFrviP----YIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQL 319
Cdd:COG1008 236 hVEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF---PeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHM 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 320 GYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSMetivgyspaKSQNMGLMGGLRKHVPITKITFLLGTLS 396
Cdd:COG1008 312 GFVLLGIFALNPLGlqgAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVLAALFLLAALA 382
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 3914186 397 LCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLN 451
Cdd:COG1008 383 SLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLK 437
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
34-452 |
7.12e-56 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 200.07 E-value: 7.12e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 34 FQSVLLLSIVMI-FSIYLSIQQINSSSFSQYVW-SWIINNDFSLDFGY--LIDPLTSIM**LITTVGIMVLIYSDNYMAH 109
Cdd:MTH00151 1 LKMSSLSSFLLFsYSVFLFPLLGYFGLNGISLIfEWELLSVSSCSFSFelVLDWVSLSFSGVVCLISGCVFLFSSSYMSE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 110 DQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFvTNRVGDFGLLLGILGFY 189
Cdd:MTH00151 81 DPFLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDVLILLSIALLV 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 190 wITGSFefrdlfeifnNLIYNNEVNFLFvtLCAVLLFVGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLV 269
Cdd:MTH00151 160 -LLGHW----------SILSMWDFKLSG--WLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLL 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 270 ARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLF 349
Cdd:MTH00151 227 IRFFPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLF 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 350 LGSGSIIHSMetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILN---DSWLYSPIFAII 426
Cdd:MTH00151 307 LCAGSIIHSS--------SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILEsslMSPTSLLMVLLM 378
|
410 420
....*....|....*....|....*.
gi 3914186 427 AWATaGLTAFYMFRIYLLTFEGHLNV 452
Cdd:MTH00151 379 FVGV-GLTALYSARLSFCLVWGSMKS 403
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
18-443 |
5.57e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 197.68 E-value: 5.57e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 18 LILFPTATKSFRRMWAFqsvlllsIVMIFSIYLSIQQINSSSFSQyvWSWIINNDFSLDFGYLIDPLTSIM**LITTVGI 97
Cdd:MTH00207 1 LRMFKPSSIASYLLWFM-------SILMFPLSLYLMMCNKTILIE--WEIFTISSSPINFTIILDPTGTLFSSTVLFISA 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 98 MVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIgFWFTRPVAANACQKAFVTNRVG 177
Cdd:MTH00207 72 NVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 178 DFGLLLGIlGF-----YWITGSFEFRDlfeiFNNLIynnevnflfvTLCavlLFVGAVAKSAQFPLHVWLPDAMEGPTPI 252
Cdd:MTH00207 151 DVMLLLSI-GWtlnqgHWSITNMWQTD----MNNYI----------ALS---IMIAAMTKSAQMPFSSWLPAAMAAPTPV 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 253 SALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR 332
Cdd:MTH00207 213 SALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPK 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 333 SALFHLITHAYSKALLFLGSGSIIHSMEtivgyspaKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEI 412
Cdd:MTH00207 293 LALFHLITHALFKALLFVCAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLI 364
|
410 420 430
....*....|....*....|....*....|....
gi 3914186 413 LNDSWLY---SPIFAIIAWATaGLTAFYMFRIYL 443
Cdd:MTH00207 365 LESSLFYphnSLMILMIFLAT-ALTAAYSTRFTL 397
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
8-439 |
6.45e-55 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 202.97 E-value: 6.45e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 8 LPVPILIGAGLILFPTATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFSQYVwSWI---INNDFSLDFGYLIDPL 84
Cdd:PRK12650 2 LAVLALAALAVVLAPPLVRVLDRKAGWPLAAIFVAAAGLLLKELPPILDGDALTWSV-TWIpdlLGNGVDVNLALRADAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 85 TSIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFwfTRPVAA 164
Cdd:PRK12650 81 SLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR--SGSGGE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 165 NACQKAFVTNRVGDFGLLLGILGFYWITGSfefRDLFEIFNNLIYNNEVNFLFVTlcAVLLFVGAVAKSAQFPLHVWLPD 244
Cdd:PRK12650 159 AGSIRTLILTFFGGLTLLAAVAIAATQTGT---TSLSGILHSDVWAEKPGLTTVV--AVLIAVAAFTKSAQFPFHFWLPE 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 245 AMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMML 324
Cdd:PRK12650 234 AMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVA 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 325 ALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIP 401
Cdd:PRK12650 314 TIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDHQ---------AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVP 384
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 3914186 402 PLACFWSKDEILnDSWLYSPIFAIIAW---ATAGLTAFYMF 439
Cdd:PRK12650 385 PLFGFVSKEGML-TAFLEAPGGNAGVVlllVGAALGAVFTF 424
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-448 |
3.35e-52 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 189.03 E-value: 3.35e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 2 IIPFIPLPVPILIGAGLILfptaTKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFSQYVWSwiinnDFSLDFG--Y 79
Cdd:PRK12667 8 LTPILLVLFAFLLPLLSIL----LKGNRKIQKIYALLVSLITLILSILLFIQVYSSNKPIVYLFG-----GWPAPIGivY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 80 LIDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFT 159
Cdd:PRK12667 79 EVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 160 RPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEV----NFLFVTLCAVLLFVGAVA-KSA 234
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGglagNPPLALGVALALALWAFTiKAA 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 235 QFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL--------PLFRVIPYIMYLISIIGIITVLLGATLALAQK 305
Cdd:PRK12667 239 IFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMMVVQK 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 306 DIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRKH 382
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHA---------AGTRDIDELAGLGRK 388
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 3914186 383 VPITKITFLLGTLSLCGIPPLACFWSKdEILNDSWLYS--PIFAIIAWATAGLTAFYMFRIYLLTFEG 448
Cdd:PRK12667 389 MPIASFAFLIGALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-441 |
8.29e-52 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 187.01 E-value: 8.29e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 6 IPLPVPI-LIGAGLILFPTATKSFRRMWAFqSVLLLSIVMifSIYLSIQQINSSSFSQYVWSWIINndfsLDFGYLIDPL 84
Cdd:PRK08375 6 LPLLVAVpLLAAALIVLLPKRRRLRWALAL-LVAALTFAL--AISLLPQVLDGGVIAYVVGGWPPG----IGIELRADSL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 85 TSIM**LITTVGIMVLIYSDNYMAHDQGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRpVAA 164
Cdd:PRK08375 79 SALFLLVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR-RAL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 165 NACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNnliynnEVNFLFVTLcaVLLFVGAVAKSAQFPLHVWLPD 244
Cdd:PRK08375 156 AAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAF--GFVLLALALKAAVFPLHTWLPR 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 245 AMEGPTPISALIHAATMVAAGIFLVARLL-----PLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQL 319
Cdd:PRK08375 228 AYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQM 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 320 GYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIihsmetivgYSPAKSQNMGLMGGLRKHVPITKITFLLGTLS 396
Cdd:PRK08375 308 GYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAI---------EVTYGTRRLSELSGLGRRMPLTAAAFAVASLS 378
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 3914186 397 LCGIPPLACFWSKDEIL---NDSWLYSPIFAIIawATAGLTAFYMFRI 441
Cdd:PRK08375 379 LIGVPPTSGFVSKWYLVvgaVEAGQWLVLAVLL--ASSLLALLYFLRI 424
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
81-448 |
3.00e-51 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 186.07 E-value: 3.00e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 81 IDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTR 160
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 161 PVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEfrdlfeiFNNLIYNNEVNFLFVTLCAVLLFVGAVA-KSAQFPLH 239
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLN-------MAYLAVKMSENPTVVAKIALALFIAGLAmKSGAVPVH 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 240 VWLPDAM-EGPTPISALIHAATmvAAGIFLVAR-LLPLFRV---IPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYS 314
Cdd:PRK08376 241 MWLPDAYpAAPSSISAMLLVIK--QAGLYALARvLFSIYGPainLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYH 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 315 TMSQLGYMMLALGMG--SYRS-------------ALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGL 379
Cdd:PRK08376 319 SVSQIGYMLLGLGVGlaALGDpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETGT---------RNLNELGGL 389
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 3914186 380 RKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEG 448
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-441 |
2.06e-44 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 166.06 E-value: 2.06e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 8 LPVPILIGAGLILF---PTATKSFRRMWAFQSVLLLsIVMIFSIYLSIQQINSSSFSQyvwswiinndfsldfGYLIDPL 84
Cdd:COG1007 8 LPEIILLLGALVLLlldLFLPRRSRRLLAGLALLGL-LLALALLLLALGGGTGTAFGG---------------MFVVDGF 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 85 TSIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTS-MLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVA 163
Cdd:COG1007 72 ALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRS 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 164 ANACQKAFVTnrvGDFG---LLLGILGFYWITGSFefrDLFEIFNNLIYNNEVNFLFVTlcAVLLFVGAVA-KSAQFPLH 239
Cdd:COG1007 152 SEAALKYFLL---GALSsgfLLYGISLLYGATGSL---NLAGIAAALAAGGANSPLLLL--GLVLVLAGLAfKLSAVPFH 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 240 VWLPDAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTM 316
Cdd:COG1007 224 MWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSI 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 317 SQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLgsgsIIhsmeTIVGYSPAKSQNMGLMGGLRKHVPITKITFLLG 393
Cdd:COG1007 303 AHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VI----LLLSRKGGEAEEIEDLAGLARRSPLLALAMTIF 374
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 3914186 394 TLSLCGIPPLACFWSKDEILNDSW---LYspIFAIIAWATAGLTAFYMFRI 441
Cdd:COG1007 375 LLSLAGIPPTAGFFGKFYVFSAAVeagLY--WLAVIAVLNSVISAYYYLRV 423
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
8-441 |
1.05e-41 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 158.45 E-value: 1.05e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 8 LPVPILIGAGL-ILFPTATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFSQyvwswiinndfsldfGYLIDPLTS 86
Cdd:PRK05777 12 LPELILLGAAVvLLLIDAFVRRHSRRATLAVLALLLALVALLFVLGAAGGGTAFGG---------------MLVVDGFAL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 87 IM**LITTVGIMVLIYSDNYMAhDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANA 166
Cdd:PRK05777 77 FLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEA 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 167 CQKAFVtnrVGDFG---LLLGILGFYWITGSFEFRDLFEIFNNLIYNNevnfLFVTLCAVLLFVGAVAKSAQFPLHVWLP 243
Cdd:PRK05777 156 AIKYFV---LGALAsgfLLYGMSLLYGATGSLSFAGIAKALADGSGNS----LLLLFGLVFLLVGLAFKLSAVPFHMWTP 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 244 DAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLG 320
Cdd:PRK05777 229 DVYEGaPTPVTAFLATAPKIAA-FAVLLRLLvvAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAG 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 321 YMMLALGMGS---YRSALFHLITHAYSKallfLGSGSIIHSMETIVGYspakSQNMGLMGGLRKHVPITKITFLLGTLSL 397
Cdd:PRK05777 308 YLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGE----AESISDFAGLSKRSPLLAAVMTIFMLSL 379
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 3914186 398 CGIPPLACFWSKDEIL------NDSWLyspifAIIAWATAGLTAFYMFRI 441
Cdd:PRK05777 380 AGIPPTAGFWGKFYVFeaaveaGLWWL-----AVIGVLNSAIGAFYYLRV 424
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
2-356 |
3.55e-41 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 157.55 E-value: 3.55e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 2 IIPFIPLPVPILIGAGLILFPTATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSfsqyvwSWIINndfsldfgyli 81
Cdd:PRK08168 5 VCALLPAVLMSLAAGGLLLSRWLTRALWRIAQAASLAGLFLALLGLVLFATGAAWPAA------AWLEV----------- 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 82 DPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRP 161
Cdd:PRK08168 68 SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 162 VAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIfnnliYNNEVNFLFVTLCAVLLFVGAVAKSAQFPLHVW 241
Cdd:PRK08168 148 FARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAH-----LAAQGASPSLQAAALLLVLAVILKTAQLPVHGW 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 242 LPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGY 321
Cdd:PRK08168 223 LIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGF 301
|
330 340 350
....*....|....*....|....*....|....*
gi 3914186 322 MMLALGMGSYRSALFHLITHAYSKALLFLGSGSII 356
Cdd:PRK08168 302 MLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
81-448 |
9.48e-41 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 158.51 E-value: 9.48e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 81 IDPLTSIM**LITTVGIMVLIYSDNYM--AHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWF 158
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFreYEGKGPGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANH 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 159 TRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDlfeifnnlIYNNEVNFLFVTLCAVLLFVGAVAKSAQFPL 238
Cdd:PRK06521 158 REAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAA--------MRAAHLSPFWASLVFLLALFGFGAKAGLVPL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 239 HVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFRVIP--YIMYLISIIGIITVLLGATLALAQKDIKRGLAYST 315
Cdd:PRK06521 230 HVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPgwWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYST 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 316 MSQLGYMMLALGMG--------------SYRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRK 381
Cdd:PRK06521 309 IENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATGT---------RDMEKLGGLIR 379
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 3914186 382 HVPITKITFLLGTLSLCGIPPLACFWSKDEIL--------NDSWLYS---PIFAIIAWATAGLTAFYMFRIYLLTFEG 448
Cdd:PRK06521 380 RMPWTAWAFLIGCLAISALPPLNGFVSEWLLLqsllsspgLPQWGLKlavPIAAAMLALTAALAAMCFVKFYGITFLG 457
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
13-457 |
9.55e-40 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 152.79 E-value: 9.55e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 13 LIGAGLILFPTATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFSQYVWSWIinNDFSLDFGYLIDPLTSIM**LI 92
Cdd:TIGR01972 9 LIGALLILLLPSNKDGKARWIALVVALATLLLSLLLLFQFDPTGSGFQFTEDIPWI--PALGISYHLGVDGISLLLVLLT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 93 TTVGIMVLIYSDNYMAHDQGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWfTRPVAANACQKAFV 172
Cdd:TIGR01972 87 ALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYAAMKFFL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 173 TNRVGDFGLLLGILGFYWITG-SFefrDLFEIFNNLIYNNEVNFLFVtlcavLLFVGAVAKSAQFPLHVWLPDAM-EGPT 250
Cdd:TIGR01972 164 YTLAGSLLMLLAILGLYFLGGgTF---DLLELLNLPLPFGVQTWLFL-----AFFIAFAVKVPLFPLHTWLPDAHvEAPT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 251 PISALIHAATMVAAGIFLVARLLPLF-RVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG 329
Cdd:TIGR01972 236 AGSVILAGVLLKMGTYGFLRFNLPLFpDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSF 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 330 SYRS---ALFHLITHAYSKALLFLGSGSIihsmetivgYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACF 406
Cdd:TIGR01972 316 NELGisgAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGF 386
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 3914186 407 WSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNVHFQNY 457
Cdd:TIGR01972 387 VGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAE 437
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
66-409 |
1.37e-38 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 151.69 E-value: 1.37e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 66 SWIINNDFSLDFGYLIdpLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFfsTSMLGLVTSSNLIQIYIFWEL 145
Cdd:PRK08668 54 LTLFFGGFKLTFTLTH--LSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVLGVFLANDLLTLYIFWEI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 146 VGLCSYLLIGFWFTRpvAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFrdlFEIFNNLIYNNEVNF-LFVTLcavL 224
Cdd:PRK08668 130 MTFSSFMMVPMGKKE--SRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDF---ADISQGLINDTSTGFaLIVFL---F 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 225 LFVGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLLP---------LFRVIPYIMYLISIIGII 292
Cdd:PRK08668 202 LLAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtklfsefgTYRGVPLFNYILAWLGNI 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 293 TVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspak 369
Cdd:PRK08668 282 SIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGT-------- 353
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 3914186 370 sQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSK 409
Cdd:PRK08668 354 -TKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
2-451 |
1.03e-37 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 147.27 E-value: 1.03e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 2 IIPFIPLpvpilIGAGLILFptATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFSQYVWSWIINNDFSLDFGYLI 81
Cdd:PRK05846 8 LLIFLPL-----IGGLLVLL--TERFGARLARWIALIGTLLTLLLSLVLWIGFDSSNAGFQFVEKHPWIPRFGISYHLGV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 82 DPLTSIM**LITTVGIMVLIYSDNYMAHDQGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFW--FT 159
Cdd:PRK05846 81 DGISLLLVVLTALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWggKN 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 160 RPVAANacqKAFVTNRVGDFGLLLGILGFYWI----TGSFEFRDLFeifNNLIYNNEVNFLFVTLcavllFVGAVAKSAQ 235
Cdd:PRK05846 159 RIYAAT---KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLL---NLPLPPGVQYWLFLAF-----FIAFAVKMPM 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 236 FPLHVWLPDAMEGPTPISALIHAATMVAAGIF-LVARLLPLFRVIP-YIMYLISIIGIITVLLGATLALAQKDIKRGLAY 313
Cdd:PRK05846 228 FPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDAShEFAPIIITLGVIAIIYGALVALAQTDIKKLIAY 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 314 STMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIihsmetivgYSPAKSQNMGLMGGLRKHVPITKITF 390
Cdd:PRK05846 308 SSISHMGFVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVL---------YDRLHTRDIADYGGLAKVMPVLAAFF 378
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 3914186 391 LLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLN 451
Cdd:PRK05846 379 LFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVK 439
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
12-409 |
8.77e-37 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 146.41 E-value: 8.77e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 12 ILIGAGLILFPTATKSF----RRMWAFQSVL-LLSIVMIFSIYLSIQQINSSSFSQYVWSWIInndfSLDFGYLIDPLTS 86
Cdd:PRK08667 5 LFLGAILLLLAAAVIPLvfrhKRKRVWQSVLwLVIAIALLLFAGSLQLFTGNPLDIPLWGIAP----GLDITFHIDRLAA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 87 IM**LITTVGIMVLIYSDNYMAHDQGYLR---FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVA 163
Cdd:PRK08667 81 FFIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEET 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 164 ANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLfeifnnliynnEVNFLFVTLCAVLLFVGAVAKSAQFPLHVWLP 243
Cdd:PRK08667 161 QRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPL-----------GASAGILSLVFLLLFLGFGIKAGIIPFHKWLP 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 244 DAMEG-PTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYM 322
Cdd:PRK08667 230 YAHPAsPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGII 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 323 MLALG--------------MGSYRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRKHVPITKI 388
Cdd:PRK08667 310 LMGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHATGT---------RNIEKMGGLVKLMPYTSA 380
|
410 420
....*....|....*....|.
gi 3914186 389 TFLLGTLSLCGIPPLACFWSK 409
Cdd:PRK08667 381 LFLVGAVSIAALPPFNGFASE 401
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
67-441 |
1.32e-35 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 141.11 E-value: 1.32e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 67 WIINNDFSLDFGYLIDPLTSIM**LITTVGIMVLIYSDNYMAHD--QGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWE 144
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 145 LVGLCSYLLIGFWFTRPVAAnacqkafvtnrvgdfgLLLGILGFYWITGSFEFRD----LFEIFNNLIYNNEVNFLFVTL 220
Cdd:PRK06589 147 LLTISTAFLIGHTRNNISLS----------------GGYKYLKILMISALLLFLPavilIYTKTGNLDFVSGGLFSKNQS 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 221 CAVLL-FVGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLIS------IIGIIT 293
Cdd:PRK06589 211 IILLLmFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAefnwliFIPIVS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 294 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM---GSYRSALFHLITHAYSKALLFLGSGSIihsmetivgYSPAKS 370
Cdd:PRK06589 291 IFYSSLKALKTDNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKE 361
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 3914186 371 QNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEIL-----NDSWLYSPIFAIIAWATAGLTAFYMFRI 441
Cdd:PRK06589 362 DQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKI 437
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
2-408 |
5.07e-35 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 139.29 E-value: 5.07e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 2 IIPFIPLPVPILIGAGLILFPtatksFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFsqyvwswiinndFSLDFGYLI 81
Cdd:PRK06458 5 ILFALLLLIPLLASLLLFALR-----KRRLVATLNVLGITLTLILALWLVFTVPDAGEI------------FAAGLWFFI 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 82 DPLTSIM**LITTVGIMVLIYSDNYMAHDQ-------GYLRFFAYM-SFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLL 153
Cdd:PRK06458 68 DDLNVFFLALIGVVGFLTSLYSIGYMRHEVehgelspVTLRLYYGMyQLFLFTMLLALTSNNLGLMWVAIEATTLSSALL 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 154 IGFWFTRpVAANACQKAFVTNRVG-DFGLLLGILGFYWITGSFEFRDLFEIFNNLI-YNNEVNFLFVTLCAVLLFVGAVA 231
Cdd:PRK06458 148 VGIYRTR-ASLEAAWKYIIICSVGvAFALFGTILVYANAATVMGDGEMAILWTELLkHASLLDPTLMKLAFVFLLIGFGT 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 232 KSAQFPLHVWLPDA-MEGPTPISALIhaatmvaAGIFLVARLLPLFRVipYIM-----------YLISIIGIITVLLGAT 299
Cdd:PRK06458 227 KVGLFPMHAWLPDAhSEAPSPVSALL-------SGVLLNVALYAVLRY--YILidaaigsdfpgRLLLIFGLLSVLVAAF 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 300 LALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLM 376
Cdd:PRK06458 298 FLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKYGT---------RDINVI 368
|
410 420 430
....*....|....*....|....*....|..
gi 3914186 377 GGLRKHVPITKITFLLGTLSLCGIPPLACFWS 408
Cdd:PRK06458 369 RGLLKVSPLTGWGLMLGALAIAGMPPFGVFIS 400
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
95-446 |
4.08e-34 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 136.97 E-value: 4.08e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 95 VGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTrpvaANACQKA---F 171
Cdd:MTH00095 57 VTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNN----WDSNSGAmntA 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 172 VTNRVGDFGLLLGILGFywitgsfefrdlfeIFNNLIYNNEvnFLFVTLCAVLLFVGAVAKSAQFPLHVWLPDAMEGPTP 251
Cdd:MTH00095 133 LTNRIGDFFIFLFFSGF--------------IFSSYYFFSF--SFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTP 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 252 ISALIHAATMVAAGIFLVARLLPLFRVIPYIMyLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY 331
Cdd:MTH00095 197 VSSLVHSSTLVTAGLILLMNFSYLILNMNVMK-IMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLS 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 332 RSALFHLITHAYSKALLFLGSGSIIHSMetivgYSPAKSQNMGLMGGLRKHVpitKITFLLGTLSLCGIPPLACFWSKDE 411
Cdd:MTH00095 276 FVSFIHLLSHALFKSCLFMQVGYLIHSN-----FGQQDGRNYSNNGNLPMFI---QLQLLVTLFCLCGLMFTSGMVSKEL 347
|
330 340 350
....*....|....*....|....*....|....*..
gi 3914186 412 ILNDSWL--YSPIFAIIAWATAGLTAFYMFRIYLLTF 446
Cdd:MTH00095 348 ILELFFFnnYMIFFSLMFFFSVFLTFGYSYRLWKSFF 384
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-448 |
3.22e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 133.54 E-value: 3.22e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 11 PILIGAGLILFPTATKSFRRMWAfqsvlLLSIVMIFSIYlsiqqinsssFSQYVWSWIINNDFSLDFgyLIDPLTSIM** 90
Cdd:PRK07234 12 PFLLGFAIYLLPKLDRNLALGMA-----IVSAVYALGLV----------ASMVPLELTLLDNFGVTL--RADALSGYFIL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 91 LITTVGIMVLIYSdnyMAHDQGYLrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKA 170
Cdd:PRK07234 75 TNALVTLAVIFYC---WESAKTRF-FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 171 FVTNRVGDFgLLLGILGFYWITGSFEFRDLFEIfnnliynnevnflfVTLCAVLLFVGAVAKSAQFPLHVWLPDAMEGPT 250
Cdd:PRK07234 151 FYSNVAMLF-YLIGAVLVYQANGTFAFSGLATA--------------DPEAFALIALGLLVKGGIFVSGLWLPLTHSEAE 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 251 PISALIHAATMVAAGIFLVARLLPLfrvIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGs 330
Cdd:PRK07234 216 PPVSALLSGVVVKAGVFPLVRCALD---VPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG- 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 331 yrsALFHLiTHAYSKALLFLGSGsIIHSmETIVGYspaKSQnmglMGGLRKHVPITkitflLGTLSLCGIPPLACFWSKD 410
Cdd:PRK07234 292 ---GLYAL-AHGLVKSTLFLCAG-ALPS-RNFTEL---ISQ----MLGIGKWIPLT-----MASFSIAGFPLLAGFVSKV 353
|
410 420 430
....*....|....*....|....*....|....*...
gi 3914186 411 EILndsWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEG 448
Cdd:PRK07234 354 LTL---KNLLPWQAIALNLAAVGTAASFWKFIFLPFSA 388
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
2-441 |
2.07e-32 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 131.22 E-value: 2.07e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 2 IIPFIPLPVPILIGAGLILFPTATKSFRRMwAFQSVLLLSIVMIFSIYLSIQQINSSSFSQYVWSWIINNDFSLDFGyli 81
Cdd:TIGR01770 1 LIAILPEIILLLGAFILLLYGLFYSRKKRN-PLLLKNLSYIVLLSALVSLFLTLQYAAYLFTGFSFFIVDNFALLIK--- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 82 dpltsiM**LITTVGIMVLIYSDNYMAHDQgYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRP 161
Cdd:TIGR01770 77 ------LILLLSTLLTFFFALSYLSKEKIN-KFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSR 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 162 VAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNlIYNNEVNFLfvtLCAVLLFVGAVAKSAQFPLHVW 241
Cdd:TIGR01770 150 FSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSN-GMLNISLLL---LGIVLILVGLLFKLSAVPFHMW 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 242 LPDAMEG-PTPISALIHAATMVAA-GIFLVARLLPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQL 319
Cdd:TIGR01770 226 VPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHV 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 320 GYMMLALGMGS---YRSALFHLITHAYSKALLFlgsgSIIHSMETivgYSPAKSQNMGLMGGLRKHVPITKITFLLGTLS 396
Cdd:TIGR01770 306 GYILIGLLAGTlegIKAVLFYIFIYALMSLGAF----GVLSLLRS---YKDEWIEYISDFAGLFKTNPILAILILIFMFS 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 3914186 397 LCGIPPLACFWSKDEIL-----NDSWLYSPIFAIiawaTAGLTAFYMFRI 441
Cdd:TIGR01770 379 LAGIPPLAGFFGKFYVFfallkSGLYWLAVIAVL----TSVIGAFYYLRV 424
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
129-448 |
3.63e-31 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 127.96 E-value: 3.63e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 129 GLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPvAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNli 208
Cdd:PRK08377 123 GMIATGDIFNLFVFMEITAITAYALTAYNKTGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGT-- 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 209 ynneVNFLFVTLCAVLLFVGAVAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLPLFRVIP---YIMY 284
Cdd:PRK08377 200 ----IDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANgwsSVLK 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 285 LISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmet 361
Cdd:PRK08377 275 LVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGIT--- 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 362 ivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEIL--NDSWLYSPIFAIIAWATAGLTAFYMF 439
Cdd:PRK08377 352 ------LGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIIlaGLSAGYTWPVALVLGASVVEAVYYFR 425
|
....*....
gi 3914186 440 RIYLLTFEG 448
Cdd:PRK08377 426 LIHTMWFKG 434
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-448 |
2.01e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 122.75 E-value: 2.01e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 6 IPLPVPILIGAGLILFPTATKSFRrmwaFQSVLLLSIVMIFSIYLSIQQINSSSFSQYVWSWiiNNDFSLDFgyLIDPLT 85
Cdd:PRK07691 8 LPILIPVITAILLIFLGKRPIIQR----YVALIGSLLTLVAAIILVANVYKHGIQTLELGNW--KAPFGIVF--VADMFA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 86 SIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRpVAAN 165
Cdd:PRK07691 80 ALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQLR 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 166 ACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVnflFVTLCAVLLFVGAVAKSAQFPLHVWLPDA 245
Cdd:PRK07691 159 ESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTG---LITVVAILFLFVFATKAGLFPLYFWLPGS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 246 MEGP-TPISALIhAATMVAAGIFLVARLLPLFRV--IPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYM 322
Cdd:PRK07691 236 YYAPpIAIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVI 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 323 MLALGMG---SYRSALFHLITHAYSKALLFLGSGSIIHsmetIVGYSPAKSqnmglMGGLRKHVPITKITFLLGTLSLCG 399
Cdd:PRK07691 315 LVGVAMMtesGMIGAIYYLIHDMIVKAALFLLIGIMIK----ITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSLAG 385
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 3914186 400 IPPLACFWSKDEILNDSWLY-SPIFAIIAWATAGLTAFYMFRIYLLTFEG 448
Cdd:PRK07691 386 IPPLSGFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWG 435
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
81-378 |
2.24e-29 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 122.84 E-value: 2.24e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 81 IDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSF--FSTSMLGLvtSSNLIQIYIFWELVGLCSYLLIGFWF 158
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGATLLGLTLLIGLNK 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 159 TRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRdlfeifNNLIYNNEVNF--LFVTLCAVLLFVGAVAKSAQF 236
Cdd:PRK08601 148 GWKVAREAAKISGMLFLISWLALALAIVWLFIATGEWQLT------SVLSNENLAQLgtWEKTGINLLLILAVMIPAAQW 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 237 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLFR-VIPYIMYLIsiIGIITVLLGATLALAQKDIKRGLAYST 315
Cdd:PRK08601 222 PFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHdDIAQILLLI--FASISVLIGTGISLVQVDYKRQLVGST 298
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 3914186 316 MSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEtIVGYSPAKSQNMGLMGG 378
Cdd:PRK08601 299 MAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN-IVKQANEKKSYLWIVVG 360
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
2-409 |
4.08e-27 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 116.53 E-value: 4.08e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 2 IIPFIPLPVPILIGAGLILFPtatksFRRMWafQSVLLLSIVMIFSIYLSIQQINSSSFSqyvwswIINNDFSLdfgYLI 81
Cdd:PRK12668 2 MLDFLPPALVFIAGALLVPFL-----PGRAR--KALLLLAPVLAVLAVLTVPEGTYLTVT------FLGFDLVL---GRV 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 82 DPLTSIM**LITTVGIMVLIYSdnymAHDQGYLRFFAYMSFFSTSmLGLVTSSNLIQIYIFWELVGLCSYLLIgfWFTR- 160
Cdd:PRK12668 66 DKLSRVFGLIFGIMAFIGVIYA----LHVKDPGQHVAALLYVGSA-LGAVFAGDLLTLFVFWELMAFTSTFLV--WARGt 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 161 PVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFrDLFEIFNnliynnevnflfvTLCAVLLFVGAVAKSAQFPLHV 240
Cdd:PRK12668 139 KAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLG-------------GTAAWLILIGFGVNAAFPPLHA 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 241 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYImylisiiGIITVLLGATLALAQKDIKRGLAYSTMSQLG 320
Cdd:PRK12668 205 WLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELLIYI-------GAAMAVYGVFFALLENDLRRLLSYHIVSQVG 277
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 321 YMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSpaksqnmglMGGLRKHVPITKITFLLGTLSL 397
Cdd:PRK12668 278 YMVAGIGIGTalaINGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTE---------LGGLYRSMPLTALFCLVGALSI 348
|
410
....*....|..
gi 3914186 398 CGIPPLACFWSK 409
Cdd:PRK12668 349 SAFPLFSGFVSK 360
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
3-446 |
5.72e-27 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 115.05 E-value: 5.72e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 3 IPFIPLPVPILIGAGLILFptatKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINsssfsqyvwswiiNNDFSLDFG---- 78
Cdd:PRK12663 5 LLILPMLLPLLCGLVLVFL----RNRDRLQRYLAIGTLTILTLISLALLIYVQR-------------HGPITLDFGgwlp 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 79 -----YLIDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLL 153
Cdd:PRK12663 68 pfgiqFTGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVL 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 154 IGFWFTRpVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVnflfVTLCAVLLFVGAVaKS 233
Cdd:PRK12663 148 ITLGQER-EQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATL----TTIALLFLLAFGM-KA 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 234 AQFPLHvWLPDAMEGP-TPISALIhAATMVAAGIFLVARLLP-LFRVIPYIMY-LISIIGIITVLLGATLALAQKDIKRG 310
Cdd:PRK12663 222 ALFPFM-WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHpLLATMAAITMVIGALGALAYKDIRRI 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 311 LAYSTMSQLGYMMLALGMGSY---RSALFHLITHAYSKALLFLGSGSIIHsmetIVGYSPAKSqnmglMGGLRKHVPITK 387
Cdd:PRK12663 300 AGYQVISSIGFILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLVR----LTGYRSLQY-----LGGLYRKEPLFG 370
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 3914186 388 ITFLLGTLSLCGIPPLACFWSKDEIL-----NDSWlyspIFAIIAWATAGLTAFYMFRIYLLTF 446
Cdd:PRK12663 371 ALFLILIFAIGGLPPFSGFWGKVLLVqgaldNGAY----ILLALMLITSLITMYSLFRIFFLAY 430
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
36-356 |
3.67e-26 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 113.05 E-value: 3.67e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 36 SVLLLSIVMIFSIYLSIQQINSSSFSqyvWSWIINNDFSLDFGYLIDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLR 115
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVS---LNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 116 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTrPVAANACQKAFVTNRVGDFGLLLgILGFYWITGSF 195
Cdd:MTH00063 78 LNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFL-LIGLSCWGGSG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 196 EFrdlfeifnnliynnevnflfvtLCAVLLFVGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 275
Cdd:MTH00063 156 SF----------------------LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYL 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 276 FRVIPYImYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSI 355
Cdd:MTH00063 214 LGFSWLS-IFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV 292
|
.
gi 3914186 356 I 356
Cdd:MTH00063 293 M 293
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
13-457 |
3.15e-23 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 104.02 E-value: 3.15e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 13 LIGAGLI-LFPTATKSFRrmWAFQSVLLLSIVMIFSIYLSIQ---QINSSSFSQYV-WSWIINNDFSLDfgylIDPLtSI 87
Cdd:PRK07363 10 ILGAIIIgFFPGNLPSAR--LRQITLVFAVLVLAWSLFLLTQfdlSDPGMQFQEYLpWNEPLGLSYSLG----VDGL-SL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 88 M**LITTVGIMVLIYSDNYMAHDQGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPvAANAC 167
Cdd:PRK07363 83 PLLVLNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-RGYAS 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 168 QKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNFLfvtlcaVLLFVGAVAKSAQFPLHVWLPDAME 247
Cdd:PRK07363 160 IKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILL------TGLLLGFGIKIPLVPLHTWLPDAYT 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 248 GPTPISALIHAATMVAAGIFLVARL-LPLFrviPYIMYLIS----IIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYM 322
Cdd:PRK07363 234 EASPAVAILLGGVLAKLGTYGLLRFgLQLF---PQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYI 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 323 MLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIihsmETIVGYSPAKSQNmGLMGGLRKhVPITKITFLLGTLSLCG 399
Cdd:PRK07363 311 LVAAAAGTQLSllgAVAQMISHGLILALLFHLVGIV----ERKVGTRDLDVLN-GLMNPIRG-LPLTSALLVLAGMASAG 384
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 3914186 400 IPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNVHFQNY 457
Cdd:PRK07363 385 IPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKLAYY 442
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
29-441 |
3.71e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 103.66 E-value: 3.71e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 29 RRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFSQYVWSWIINNDFSLDfgylIDPLTSIM**LITTVGIMVLIYS---DN 105
Cdd:PRK12662 26 RKLVKIISCIVVAVSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELR----VDILSATMLVLVNFIAVMSVLYGiypNR 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 106 YMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPvAANACQKAFVTNRVGDFGLLLGI 185
Cdd:PRK12662 102 KEISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-ALVAAFEYLIIGTIGATFYLIGI 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 186 LGFYWITGSFEFRDLFEIFNNLIYNNEVNflfvtLCAVLLFVGAVAKSAQFPLHVWLPDAM-EGPTPISALIhAATMVAA 264
Cdd:PRK12662 181 GFLYAITGTLNMGDMFLIIQDLPTNRAIQ-----IGVLFIMVGLFIKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKV 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 265 GIFLVARLL------PLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR---SAL 335
Cdd:PRK12662 255 MIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAV 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 336 FHLITHAYSKALLFLGSGSIIHSMETIvgyspaksqNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILND 415
Cdd:PRK12662 335 AYIVNHSIVKSALFMVSGSISYHFGTT---------KLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDA 405
|
410 420
....*....|....*....|....*..
gi 3914186 416 SWLYSPIFAIIAWAT-AGLTAFYMFRI 441
Cdd:PRK12662 406 FIKSNAWIGLVVLLVgSGLSVIYVWKI 432
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
13-456 |
1.77e-20 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 95.15 E-value: 1.77e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 13 LIGAGLILFPTATKSFRRMWAFqSVLLLSIVMIFSIYLSIQQINSSSFSQYVWS--WIinNDFSLDFGYLIDPLTSIM** 90
Cdd:PRK06473 10 LLGAILIGFWPSGINGKLARSV-ALVIASVLLLLSLVLAFQFDPGNPNQQFTEFipWI--DSLGLSYHLGVDGLSLPLLV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 91 LITTVGIMVLIYSDNYMAHDQGYlrfFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWfTRPVAANACQKA 170
Cdd:PRK06473 87 LNSLLTLIAIYSSDESIQRPRFY---YSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKF 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 171 FVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNFLfvtlcaVLLFVGAVAKSAQFPLHVWLPDA-MEGP 249
Cdd:PRK06473 163 LLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLSTQLLLL------APILVGFGIKIPLVPFHTWLPDAhVEAS 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 250 TPISALIhAATMVAAGIFLVARL-LPLF-RVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALG 327
Cdd:PRK06473 237 TPVSVLL-AGVLLKLGTYGLLRFgVGLFpEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAA 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 328 MG---SYRSALFHLITHAYSKALLFLGSGsiihsmetiVGYSPAKSQNMGLMGGL---RKHVPITKITFLLGTLSLCGIP 401
Cdd:PRK06473 316 AAtplSILAAVFQMISHGLISALLFLLVG---------VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIP 386
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 3914186 402 PLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNVHFQN 456
Cdd:PRK06473 387 GMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSN 441
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
119-470 |
2.34e-20 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 95.07 E-value: 2.34e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 119 YMSFFSTSMLG---LVTSSNLIQIYIFWELVGLCSYLLIGFwFTRPVAANACQKAFvtnrvgdfgLLLG-----IL--GF 188
Cdd:CHL00049 113 FLLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY-TKKDVRSNEATMKY---------LLMGgasssILvyGF 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 189 YWITG-SFEFRDLFEIFNNLIYNNEVNFLFVTLCAVLLFVGAVAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGI 266
Cdd:CHL00049 183 SWLYGlSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAAS 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 267 FLVARLLPLfrVIPYIM----YLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHA 342
Cdd:CHL00049 262 ALATRIFDI--PFYFSSnewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYM 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 343 YSKALLFLGSGSIIHSMETIVGyspakSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSW---LY 419
Cdd:CHL00049 340 LFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWqagLY 414
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 3914186 420 SPIFaiIAWATAGLTAFYMFRIYLLTFEGH---LNVHFQNYGGKHKTPFYSISL 470
Cdd:CHL00049 415 FLVS--IGLLTSVISIYYYLKIIKLLMTGRnqeITPYVRNYRRSPLRSNNSIEL 466
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
219-446 |
6.95e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 90.41 E-value: 6.95e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 219 TLCAVLLFVGAVaKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLVARLLPLFRVIPYIMYLISIIGIITVLLG 297
Cdd:PRK12665 210 ALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 298 ATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMG 374
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVGLIERQ---------AGSSSLR 358
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 3914186 375 LMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEIL-----NDSWLyspIFAIIAWA--TAGLTAFYMFRIYLLTF 446
Cdd:PRK12665 359 RLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeagaeDGTWL---AWALVAGGvvTSLLTLYAVARVWTKAF 434
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
126-409 |
1.26e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 85.08 E-value: 1.26e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 126 SMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRdlfeiFN 205
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLS-----YI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 206 NLIYNNEVNF--LFVTLCAVLLFVGAVAKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLVarllpLFRVIPYI 282
Cdd:MTH00196 80 NLVLNSGQSFssVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFSI-----LVSIGLNV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 283 MYLIsIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSM 359
Cdd:MTH00196 153 NILL-IGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESiqaSLVYLFIYIIMSICVFSIILALNVYK 231
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 3914186 360 ETIVGYSpaksqnmglmgGLRKHVPITKITFLLGTLSLCGIPPLACFWSK 409
Cdd:MTH00196 232 NLIIEFS-----------GLSRRLPILAITLALTFLSIAGIPPLVGFLGK 270
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
79-438 |
1.28e-17 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 86.35 E-value: 1.28e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 79 YLIDPLtSIM**LITTVG-IMVLIYSDNYMAH-------DQGYLRFFaymsFFSTSMLGLVT-----SSNLIQIYIFWEL 145
Cdd:PRK08676 59 LFIDHL-GIFVVLIASVVfILAALYARGYVDHllsngelDPENLKVF----YLGFNLLLSVItfaffSDNLALFWIFAEL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 146 VGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLlGILGFYWIT------GSFEFRDLfeifnnLIYNNEVNFLFVT 219
Cdd:PRK08676 134 TTVFSAMLIAILSARENIDAALKYIFIASTAMIFAFI-GLIFLFSLTrqalgtGTLNWTEL------AAHASLLSPSVLG 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 220 LCAVLLFVGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFR---VIPYIMYLISIIGIITVL 295
Cdd:PRK08676 207 ASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGLGIFSIA 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 296 LGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGsIIHSMetivgyspAKSQN 372
Cdd:PRK08676 286 VAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ--------YRSDR 356
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 3914186 373 MGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDS-----WLYSPIFAIIAWATAGLTAFYM 438
Cdd:PRK08676 357 FDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLggisvWLVLAVLLLLLLAASSFAIFLL 427
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
116-445 |
1.65e-17 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 86.24 E-value: 1.65e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 116 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWF--TRPVAANacqKAFVTNRVGDFGLLLGILGFYWITG 193
Cdd:PRK12561 89 FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGgqKRLYAAT---KFILYTALASIFILVAGLALALSGD 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 194 SFEFrDLFEIfnnliYNNEVNFLFVTLCAVLLFVGAVAKSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFLVARL 272
Cdd:PRK12561 166 TFTF-DLAEL-----GAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLKMGG 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 273 LPLFR----VIP----YIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRS-----ALFHLI 339
Cdd:PRK12561 233 YALIRfnvqMLPdahvYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAMLQMI 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 340 THAYSKALLFLGSGsiihsmetiVGYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEI---LNDS 416
Cdd:PRK12561 311 SHGLIAAALFFLTG---------VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgITSS 381
|
330 340 350
....*....|....*....|....*....|.
gi 3914186 417 WLYSPIFAIIawaTAGLTA--FYMFRIYLLT 445
Cdd:PRK12561 382 DVYSSTFRTI---TILLAAvgLILTPIYLLS 409
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
79-409 |
4.27e-17 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 84.70 E-value: 4.27e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 79 YLIDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLrFFAYMSFFSTSmlGLVTSSNLIQIYIFWELVGLCSyllIGFWF 158
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYV-FLMLMGLASVS--AIVLADDIFNLYVFFEIAAIVQ---VGLVI 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 159 TRPVAaNACQKAFVTNRVGDFG---LLLGILGFYWITGSFEFRDLfeifNNLIYNNEVNFLFVtLCAVLLFVGAVAKSAQ 235
Cdd:PRK06277 142 ASGTE-EAYKAALKYMILGNVAgsiLLLGIGFLLASTGTLNITDI----HNALLVNPTSPVIY-GGLLLLIFGLLYGSGL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 236 FPLHVWLPDAMEGPTP-ISALIHA---ATMVAAGIFLVaRLLPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGL 311
Cdd:PRK06277 216 PPFHTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLL 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 312 AYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSIihsmetivgYSPAKSQNMGLMGGLRKHVPITKI 388
Cdd:PRK06277 295 AYHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVAF 365
|
330 340
....*....|....*....|.
gi 3914186 389 TFLLGTLSLCGIPPLACFWSK 409
Cdd:PRK06277 366 MVLCAKLAISGVPPFNGFQSK 386
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
131-448 |
3.26e-16 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 82.57 E-value: 3.26e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 131 VTSSNLIQIYIFWELVGLCSYLLIGfwftrpvaanaCQKA----FVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNN 206
Cdd:PRK08042 107 VIASNLGMFVVMAEIMALCAVFLTG-----------NSKEgklwFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQ 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 207 LIYNNEVNFLFVTlcAVLLFVGAVaksaqfPLHVWLPDAMEGPTPISALIHAATMVAAGIF------LVARLLPLFRVIp 280
Cdd:PRK08042 176 LPLGSDIWLLGVI--GFGLLAGII------PLHGWVPQAHANASAPAAALFSTVVMKIGLLgiltlsLLGGNAPLWWGV- 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 281 yimyLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG--------------SYRSALFHLITHAYSKA 346
Cdd:PRK08042 247 ----ALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKS 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 347 LLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEI------LNDSWLY- 419
Cdd:PRK08042 323 VLFLGAGSVWFR---------TGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFv 393
|
330 340 350
....*....|....*....|....*....|...
gi 3914186 420 ----SPIFAIIAWATAGLTAFYMFRIYLLTFEG 448
Cdd:PRK08042 394 arllGPLLAVGLAITGALAVMCMAKVYGVTFLG 426
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
49-409 |
5.06e-16 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 81.64 E-value: 5.06e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 49 YLSIQQINSSSFSQYVwSWIINNDFSLDFGYLIDPLTSIM**LITTVGIMVLIYSDNYMahDQGYLRFFAYMSFFSTSML 128
Cdd:PRK02504 45 YLAIAGLGAALVALAL-QWDNPNPISFLGSFNADNLSIAFRAIIALSTLVTLLMSWRYV--EQSGTPLGEFAAILLTATL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 129 G---LVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEfrDLFEIFN 205
Cdd:PRK02504 122 GgmfLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGST--QLSAIAL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 206 NLIYNNEvnflFVTLCAVLLFVGAVA-KSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLVARLLPLfrVIPYI- 282
Cdd:PRK02504 200 ALITSPS----LGLALALVFVIAGIAfKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLLVT--AFPSFd 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 283 ---MYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHayskalLFLGSGS-- 354
Cdd:PRK02504 273 eqwKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAY------LFMNLGAfa 346
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 3914186 355 --IIHSMET----IVGYSpaksqnmglmgGLRKHVPITKITFLLGTLSLCGIPPLACFWSK 409
Cdd:PRK02504 347 cvILFSLRTgtdqISDYA-----------GLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
35-413 |
7.19e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 80.83 E-value: 7.19e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 35 QSVLLLSIVMIFsIYLSIQQINSSSFSQYVWSWIINNDFSLDFGYLIdpltsIM**LITTVGIMVLIYSDNYMAHDQGYL 114
Cdd:MTH00199 24 LSTLKLSIGVLL-LIGLIVELNSLNLFQSDKVLDGTNGLLLTNSWII-----ISKIIIIIGSISILLMGSGETILSEGGQ 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 115 RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGS 194
Cdd:MTH00199 98 SSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGE 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 195 FEFRDlfeifNNLIYNNEVNFLFVTLCavLLFVGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLVarll 273
Cdd:MTH00199 178 TSIQG-----INSILTGDVGKILITIS--LLFKLSAA-----PFHMWAPDVYEGaPTITTALL--ATVPKIGVFSI---- 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 274 pLFRVIPyIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLIThayskallflgsg 353
Cdd:MTH00199 240 -LVQIGP-VTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIY------------- 304
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 3914186 354 SIIHSMETIVGYSPAKSQNMGL-----MGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEIL 413
Cdd:MTH00199 305 MIIYVIMSICSFSIILSLKLTKgliveVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
67-117 |
8.99e-15 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 68.61 E-value: 8.99e-15
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 3914186 67 WIINNDFSLDFGYLIDPLTSIM**LITTVGIMVLIYSDNYMAHDQGYLRFF 117
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
135-439 |
6.97e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 65.33 E-value: 6.97e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 135 NLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIfNNLIYNNEVN 214
Cdd:MTH00226 152 DIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQK 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 215 FLFVTlcavlLFVGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFRV-IPYIMYLISIIGII 292
Cdd:MTH00226 231 WIFLG-----IFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIV 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 293 TVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRSALFHLITHAYSKALLFLgsgsiihsMETIVgYSPAK 369
Cdd:MTH00226 306 GIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLvthDIIGLTGSIFIMLAHGIVSSLLFI--------LVTIL-YDRHH 376
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 370 SQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMF 439
Cdd:MTH00226 377 TRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
86-403 |
1.13e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 64.81 E-value: 1.13e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 86 SIM**LITTVGIMVLIYSDNYmAHDQGYLRffAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWftrpvaAN 165
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY-DHYGKWLS--SLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT------KK 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 166 ACQKAFVTNRVGDFGLLLGILGFYW---ITGSFEFrdlfeifnnliynnevNFLFVTLCAVLLFVGAVAKSAQFPLHV-- 240
Cdd:PRK06459 118 NKRPAFVFMAFGELSTVLILAGFAWafiISGTTNF----------------SYLPSPVPLILASFGFIIKMGMMPFLVse 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 241 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIP--YIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQ 318
Cdd:PRK06459 182 WLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPigYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIEN 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 319 LGYMMLALGM--------GSYR-----SALFHLITHAYSKALLFLGSGSIihSMETIvGYSPAKSQNMGLMGGlrkhvpi 385
Cdd:PRK06459 262 NGAILVALGLymvtkqliTSIEhfsliTVILYSFAHSVAKTGLFLSSGLQ--EKQSI-TYSKKIRNRWIELGL------- 331
|
330
....*....|....*...
gi 3914186 386 tkitfLLGTLSLCGIPPL 403
Cdd:PRK06459 332 -----TLLASSLSGLLPN 344
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
140-349 |
1.17e-10 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 64.34 E-value: 1.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 140 YIFWELVGLCSYLLIGFW--FTRPVAANacqKAFVTNRVGDFGLLLGIL--GFYWITGSFEFRDLfeifnnliYNNEVNF 215
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWggKKRQYAAT---KFILYTAGSSLFILLAALamAFYGDTPTFDMTAL--------AAKDFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 216 LFVTLCAVLLFVGAVAKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIFLVARLLPLFR----VIP----YIMYLIS 287
Cdd:PRK02546 210 GFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLKMGGYALLRmnagMLPdahaQFAPLLI 283
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 3914186 288 IIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRS-----ALFHLITHAYSKALLF 349
Cdd:PRK02546 284 VLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLF 348
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
215-441 |
1.42e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 64.49 E-value: 1.42e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 215 FLFVTLcaVLLFvgavaKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLplfrvipyIMYLISIIGIIT 293
Cdd:MTH00198 302 YLFITV--AILF-----KLAAAPFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTSLVI--------TSKLLLSVAIIS 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 294 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSaLFHLITHAYSKALLFLGSGSIIHSMETIVGYSPAKSQNM 373
Cdd:MTH00198 367 LVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYES-LQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRD 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 374 GLMGG---LRKHVPIT-------KITFLLGT--LSLCGIPPLACFWSKDEILNDS----WLYS-PIF---AIIAWATAGL 433
Cdd:MTH00198 446 GSFGNynlVRRLVDLTilsrgqpYIAFSLAIvfLSLAGIPPLLGFLGKWFILVGSikiaFSSSlSIYylvALFAIICTCI 525
|
....*...
gi 3914186 434 TAFYMFRI 441
Cdd:MTH00198 526 SAFYYIRI 533
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
12-456 |
4.92e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 62.26 E-value: 4.92e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 12 ILIGAGLILFPTATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFSQyvwswiinndfsldFGYLIDPLTSIM**L 91
Cdd:MTH00206 2 ILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSN--------------LYLSYDPLSSPLVIL 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 92 ITTVGIMVLIYSDNYMaHDQGYLRFFAYMSFFSTSMLGLV---TSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQ 168
Cdd:MTH00206 68 SCWLLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGY 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 169 KAFVTNRVGDFGLLLGILGFYWITGSFEFrDLFEIFNNLIYNNEVNFLFVTLcavllfvGAVAKSAQFPLHVWLPDA-ME 247
Cdd:MTH00206 147 YFLFYTLIGSLPLLIALLFLQNSLGSLSL-YILYFSKLTTWNNNLWWLACIL-------AFLVKLPLYGVHLWLPKAhVE 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 248 GPTpisalihAATMVAAGIFL------VARLLPLFRVIPYIM-YLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLG 320
Cdd:MTH00206 219 APV-------AGSMVLAGVLLklggygMMRIILILGPSTKLSsYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMS 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 321 YMMLALGMG---SYRSALFHLITHAY-SKALLFLGSgsiihsmetiVGYSPAKSQNMGLMGGLRKHVPITKITFLLGTLS 396
Cdd:MTH00206 292 LVTAGILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQMILPLLSFWWLLFFLA 361
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 397 LCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNVHFQN 456
Cdd:MTH00206 362 NLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLS 421
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
66-401 |
8.08e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 61.62 E-value: 8.08e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 66 SWIINNDFSLDFGYLIDPL--TSIM**LITTVGIMVLIY-SDNYMAHdqgYLRFFAYMSFFSTSML-GLVTSSNLIQIYI 141
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVdgVSLFFILLTTLLIPICILiSWKSIKF---LFKEFLLCLLFLEVLLiGVFSVLDLLLFYI 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 142 FWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSfefRDLFEIFNNLIYNNEVNFLFVTLc 221
Cdd:MTH00204 140 LFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGT---TDYQILLNIKLPLSIQKWLLVGF- 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 222 avllFVGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFRVIP-YIMYLISIIGIITVLLGAT 299
Cdd:MTH00204 216 ----FLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASeYFAPLIVMLSVIAVIYGSL 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 300 LALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRSALFHLITHAYSKALLFLGSGSIIHSMET-IVGYspaksqnmgl 375
Cdd:MTH00204 292 TTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTrLIKY---------- 361
|
330 340
....*....|....*....|....*.
gi 3914186 376 MGGLRKHVPITKITFLLGTLSLCGIP 401
Cdd:MTH00204 362 YRGLTLTMPLFVIIMLVLSLANMGFP 387
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
222-437 |
7.85e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 58.71 E-value: 7.85e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 222 AVLLFVGAVAKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLLPLFR----------VIPYIMYLisiiG 290
Cdd:PRK12666 213 AALLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLFgpeagasagfGQDWLLPG----G 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 291 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR---SALFHLITHAYSKALLFL-----------GSGSII 356
Cdd:PRK12666 287 LATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrgaAADRLA 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 357 HSMETivgYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILN---------DSWLY------SP 421
Cdd:PRK12666 367 VTPEL---YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQallnppgagAAWWLwalvllSG 443
|
250
....*....|....*.
gi 3914186 422 IFAIIAWATAGLTAFY 437
Cdd:PRK12666 444 LAALIALTRAGIRLFW 459
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
127-345 |
1.36e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 57.75 E-value: 1.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 127 MLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnN 206
Cdd:MTH00217 122 LMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC----C 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 207 LIYNNEV-NFLFvtlcaVLLFVGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLF-RVIPYIM 283
Cdd:MTH00217 198 LKIEKELqYFIF-----LGFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLpEASEYFS 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 284 YLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLG------------------YMMLALGMGSyrSALFHLITHAYSK 345
Cdd:MTH00217 273 PLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGlvtlgifshtiqglvaaiFLMLAHGLVS--SALFIAVTFLYER 350
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
237-415 |
2.47e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 56.37 E-value: 2.47e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 237 PLHVWLPDAMEGPTPISALIHAATMVAAGI---FLVARLLPlfrvipyiMYLISIIGIITVLLGATLALAQKDIKRGLAY 313
Cdd:MTH00112 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLtllLMTSNSLN--------PTLLLTLAILSTLIGGWGGLNQTQLRKIMAF 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 314 STMSQLGYMMLALGMgSYRSALFHLITHAYSKALLFLgsgsIIHSMETivgyspAKSQNMGLMgglRKHVPITKITFLLG 393
Cdd:MTH00112 182 SSIAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTTST------KTLKDMMTS---WTKSPTLNTTLMLT 247
|
170 180
....*....|....*....|..
gi 3914186 394 TLSLCGIPPLACFWSKDEILND 415
Cdd:MTH00112 248 LLSLAGLPPLTGFMPKWLILQE 269
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
214-445 |
2.78e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 56.05 E-value: 2.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 214 NFLFVTLCAVLLFVGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMylisIIGIIT 293
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLC----VISVLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 294 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSPAKSQNM 373
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGL 234
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 3914186 374 GLMGGLrkhvpitkitfllgtLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTA--FYMFRIYLLT 445
Cdd:MTH00144 235 SIISLL---------------LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISlfFYLSVFFSSF 293
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
119-439 |
6.00e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 55.36 E-value: 6.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 119 YMSFFSTSMLGL---VTSSNLIQIYIFWELVGLCSYLLIGFWFTrPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSF 195
Cdd:MTH00200 6 LPLFILSLGLGTlltFSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 196 EFRDLFEIFNnliynnevnflfvtlcAVLLFVGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 275
Cdd:MTH00200 85 GISEMLGPLS----------------ETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPA 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 276 FRVIpyimyLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLgsgsi 355
Cdd:MTH00200 149 LNSN-----ILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL----- 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 356 ihsmetivgYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTA 435
Cdd:MTH00200 219 ---------LNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLS 289
|
....
gi 3914186 436 FYMF 439
Cdd:MTH00200 290 LFFY 293
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
120-453 |
1.52e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 54.54 E-value: 1.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 120 MSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQK-AFVTnRVGDFGLLLGILGFYWITGSFEFr 198
Cdd:MTH00068 99 LIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYfLFYT-LAGSLPLLIALLILQNSLGSLSL- 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 199 DLFEIFNNLIYNNEVNFLFVTLCAVLLFVgavaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VAR 271
Cdd:MTH00068 177 ILLELMSPMQLMTYTNKIWWLACLLAFMV----KMPLYGLHLWLPKAhVEAPI-------AGSMILAAVLLklggygILR 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 272 LLPLFR-VIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAY-SKA 346
Cdd:MTH00068 246 ISILLTpLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSA 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 347 LLFLGSGSiihsmetivgYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAII 426
Cdd:MTH00068 326 LFCLANTN----------YERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILI 395
|
330 340
....*....|....*....|....*..
gi 3914186 427 AWATAGLTAFYMFRIYLLTFEGHLNVH 453
Cdd:MTH00068 396 TGLGTLITAAYTLYMFLMTQRGPLPNH 422
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
128-397 |
1.65e-07 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 54.18 E-value: 1.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 128 LGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTnRVGDFGLLLGIL--GFYwitGSFEFRDLFEIFN 205
Cdd:CHL00011 126 IGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYT-AGGSIFLLIGVLgmGLY---GSNEPTLNFETLA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 206 NLIYNNEVNFLFVtlcaVLLFVGAVAKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVARLLPLFRV----IP 280
Cdd:CHL00011 202 NQSYPVALEILFY----IGFLIAYAVKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMGAYGLIRInmelLP 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 281 YIMYLIS----IIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSY-----RSALFHLITHAYSKALLFLG 351
Cdd:CHL00011 271 HAHSIFSpwlvIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGAILQIISHGFIGAALFFL 348
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 3914186 352 SGSIIHSMETIVgyspaksqnMGLMGGLRkhVPITKITFLLGTLSL 397
Cdd:CHL00011 349 AGTSYDRIRLVY---------LDEMGGIA--IPMPKIFTMFSSFSM 383
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
114-456 |
1.87e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 54.19 E-value: 1.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 114 LRFFAYMSFFSTSMlglvtssnlIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITG 193
Cdd:MTH00127 103 LQIFLILAFGATEI---------IMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTG 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 194 SFEFRDLfEIFNNLIYNNEVNFLFVTLCAVLLFVgavaKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARL 272
Cdd:MTH00127 174 TLSMLTL-QYSQPLQLSSWADKLWWAGCLLAFLV----KMPLYGVHLWLPKAhVEAPIAGSMVLAAVLLKLGGYGMMRMM 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 273 LPLFRVIPYIMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYM---MLALGMGSYRSALFHLITHAYSKALLF 349
Cdd:MTH00127 249 VMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVaggILIQTPWGFTGALILMIAHGLTSSALF 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 350 LGSGSiihsmetivGYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWA 429
Cdd:MTH00127 329 CLANT---------NYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGL 399
|
330 340
....*....|....*....|....*..
gi 3914186 430 TAGLTAFYMFRIYLLTFEGHLNVHFQN 456
Cdd:MTH00127 400 GTLITAGYSLYMFLMTQRGPLPDHIIA 426
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
116-425 |
3.01e-07 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 53.01 E-value: 3.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 116 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTrPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSF 195
Cdd:MTH00041 6 LIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFS-PRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 196 EFrdlfeifnnLIYNNEVNFLFVTLcAVLLFVGAvaksaqFPLHVWLPDAMEGPTPISALIhaatmvAAGIFLVARLLPL 275
Cdd:MTH00041 85 SI---------NGPLNTLSSIIITL-ALALKLGL------APCHFWFPDVLQGLPFLQGLI------IATWQKIAPLILL 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 276 FRVIPYI-MYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSgs 354
Cdd:MTH00041 143 ISISNLLnSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGN-- 220
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 3914186 355 iIHSMETIvgyspaksqnmGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSK-----DEILNDSWLYSPIFAI 425
Cdd:MTH00041 221 -NFSLSTL-----------SHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCLIQNNSILISIILII 284
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
12-436 |
1.11e-06 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 51.66 E-value: 1.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 12 ILIGAGLILFPTATKSFrrMWAFQSVLLLSIVMIFSIYLSIQQINSSSFSQYVWSwiinndfsldfgyliDPLTSIM**L 91
Cdd:MTH00014 5 IMPLISLLLLPLIKYPW--SWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSS---------------DMLSAPLITL 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 92 ITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAF 171
Cdd:MTH00014 68 TLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLM 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 172 VTNRVGDFGLLLGILGFYWITGSFEFRdLFEIFNNLIYnnevnflFVTLCAVLLFVGAVAKSAQFPLHVWLPDA-MEGPT 250
Cdd:MTH00014 148 IYTVTASLPLLMSILLIFYTNNSLSML-MSSMEPPSIY-------LMNLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 251 pisalihAATMVAAGIFL------VARLLPLFrviPYIMYLISIIGIITVLLGATLA----LAQKDIKRGLAYSTMSQLG 320
Cdd:MTH00014 220 -------AGSMILAGILLklggygLLRMSSLF---MHINKSLSAPFSSISLVGAVITslicIRQPDLKSLIAYSSVGHMG 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 321 YMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIihsmetivgYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSL 397
Cdd:MTH00014 290 LMTAGIMSNTswgWQGALAMMIAHGLCSSALFALANMT---------YETTHTRSLFLTKGLLSLFPTMTMWWFLLSAAN 360
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 3914186 398 CGIPPLACFWSK----DEILNDSWLYSPIFAIIAWATAGLTAF 436
Cdd:MTH00014 361 MAAPPSINLLSEimllTSILSSSLSTAILLAITSFLAAAYSLF 403
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
50-448 |
1.64e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 50.99 E-value: 1.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 50 LSIQQINSSSFSQYVWSWIINNDFsldfgylidpLTSIM**LITTVGIMVLIYSdnymahdQGYLRFFAYMSFFSTSMLG 129
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDS----------MSSLLISLSLWISGLMMLAS-------QKSVKLRNKSSSFSLLVLL 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 130 LV-------TSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFrdlfe 202
Cdd:MTH00150 64 LClilvlafSVSSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM----- 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 203 IFNNLIYNNEVNFLFVTLCAVLLFVgavAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPL 275
Cdd:MTH00150 139 LLISSLRKLLSSMGLWGLLVFLAFL---VKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMV 208
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 276 FRVIPYIMY-LISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAY-SKALLFL 350
Cdd:MTH00150 209 FSLSSSSFSiFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFcSSGLFCL 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 351 GSGSiihsmetivgYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWAT 430
Cdd:MTH00150 289 ANYT----------YEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLM 358
|
410
....*....|....*...
gi 3914186 431 AGLTAFYMFRIYLLTFEG 448
Cdd:MTH00150 359 VFLSGLYSLYLYTSIQHG 376
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
116-324 |
1.89e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 50.94 E-value: 1.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 116 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWfTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSF 195
Cdd:PRK06591 117 FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 196 EFRDLFEIFnnliyNNEVNFLFVTLCAVLLFVGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLlpL 275
Cdd:PRK06591 196 NMTDIAAYL-----QEHTNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKF--T 268
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 3914186 276 FRVIPY------IMYLISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMML 324
Cdd:PRK06591 269 YIIIGYetiktaITNFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFL 323
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
214-470 |
5.30e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 48.90 E-value: 5.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 214 NFLFVTLCAVLLFVGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFrvipyimYLISIIGIIT 293
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSF-------MGLLICSVLS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 294 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSPAKSQNM 373
Cdd:MTH00197 147 SLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNL 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 374 glmgglrkhvpitkITFLLGTLSLCGIPPLACFWSKDEILND--SWLYSPIFAIIAWATAgLTAFYMFRIYLLTFeghLN 451
Cdd:MTH00197 227 --------------VFLGLSFLSLGGLPPLSGFFLKWLILTSllSSNISLITFMLILSTC-FSLYYYLSLAYKSL---IL 288
|
250
....*....|....*....
gi 3914186 452 VHFQNYGGKHKTPFYSISL 470
Cdd:MTH00197 289 SNWMINFLMKINLLYSGLF 307
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
213-426 |
2.50e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 47.42 E-value: 2.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 213 VNFLFVTLCAVLLFVGAVAKSAQFPLHVWLPDAMEGPTPISALIHAA--TMVAAGIflvarLLPLFRVIPYIMYLisiiG 290
Cdd:PRK12664 138 QNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLftTKVAALV-----LLLFFSGEEILLFL----G 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 291 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSA-----LFHLITHAYSKALLFLGSGSIIHSMETIvgy 365
Cdd:PRK12664 209 IITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVaigilILQIVLSVVYQTLLFMVADSVINRTRKF--- 285
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 3914186 366 spaksqNMGLMGGLRKhVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAII 426
Cdd:PRK12664 286 ------NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLY 339
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
74-343 |
1.41e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 44.97 E-value: 1.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 74 SLDFGYLIDPLTSIM**LITTVGIMVLIYSDNYMahdqgYLRFFAYMSFFSTSMLGLVT-----SSNLIQIYIFWELVGL 148
Cdd:MTH00205 48 FISSSFSFDSLSLPLIMLSFWISLLMVLASYKVF-----KSNKNSKLFTVSVIMLLLILilsfsVDNLLLFYITFEASLI 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 149 CSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYnnevNFLFVTLCAVLLFVg 228
Cdd:MTH00205 123 PTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFY----LFLYWIFLMLAFLV- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 229 avaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFLVA---RLLPLFRVIPYIMYLISIIGIITVLLGATLA--- 301
Cdd:MTH00205 198 ---KLPMYFVHLWLPKAhVEAPV-------SGSMILAGVLLKLggyGLIRITSMLYKLNSNFSELFFSISLWGGVMTgmi 267
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 3914186 302 -LAQKDIKRGLAYS-------------TMSQLGY-----MMLALGMGSyrSALFHLITHAY 343
Cdd:MTH00205 268 cLRQVDLKSLIAYSsvghmglmvvgvfSNTSWGMngaiiMMVAHGLCS--SGMFALANVNY 326
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
237-413 |
1.84e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 41.06 E-value: 1.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 237 PLHVWLPDAMEGPTPISALIHA-----ATMvaAGIFLVARLLPLfrvipyimYLISIIGIITVLLGATLALAQKDIKRGL 311
Cdd:MTH00070 110 PFHFWLPEVLQGLDLTTGLILStwqklAPM--ALLIQISHLLNS--------NLLIIMGLLSTLIGGWGGLNQTQLRKIM 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 312 AYSTMSQLGYMMLALGMgSYRSALFHLITHAYSKALLFLgsgSIIHSMETivgyspaksqNMGLMGGLRKHVPITKITFL 391
Cdd:MTH00070 180 AYSSIAHLGWMIIILTF-SPHLTLLNLLIYLIMTSSMFL---MLMNLNST----------NINKLSSSWSKNPTLTSMMM 245
|
170 180
....*....|....*....|..
gi 3914186 392 LGTLSLCGIPPLACFWSKDEIL 413
Cdd:MTH00070 246 LTLLSLGGLPPTTGFIPKWLIL 267
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
34-356 |
2.00e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 41.29 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 34 FQSVLLLSIVMIFSIYLSIQQINSSSFSQYVWSWIINNDFS-LDFGYLIDPLTSIM**LITTVGIMVLIYSDNYMAHDQG 112
Cdd:MTH00163 6 FMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSnISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKNNY 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 113 YLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWIT 192
Cdd:MTH00163 86 SNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 193 GSFefrdlfeIFNNLIYNNEVNFLFVtLCAVLLFVgavAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFLVAR 271
Cdd:MTH00163 166 GSL-------SFFLLNFFGSLNFLWY-LSMILAFL---VKMPMFFVHLWLPKAhVEAPV-------SGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 272 LLPLFRVIPYIMYLISIIGIITV---LLGATLA----LAQKDIKRGLAYS-------------TMSQLGY-----MMLAL 326
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWIsisLVGGVIVslicLRQVDLKSLIAYSsvahmglvlgglmTFSYWGLmgsllMMIGH 307
|
330 340 350
....*....|....*....|....*....|
gi 3914186 327 GMGSyrSALFHLITHAYSKallfLGSGSII 356
Cdd:MTH00163 308 GLCS--SGLFCLANIIYER----LGSRSLL 331
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
222-414 |
2.16e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 40.92 E-value: 2.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 222 AVLLFVGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfrvipYIMYLISIIGIITVLLGATLA 301
Cdd:MTH00011 91 ALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGLGG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 302 LAQKDIKRGLAYSTMSQLGYMMLALgMGSYRSALFHLITHAYskallflgsgsIIHSMETIVGYSPAKSQNMglMGGLRK 381
Cdd:MTH00011 166 MNQTQLRPLLAYSSIGHMGWMTMIS-VFSPSMAILYFMTYII-----------ITTPLMLLFAYLNAFSTKF--NSKISS 231
|
170 180 190
....*....|....*....|....*....|...
gi 3914186 382 HVPITKITFLLGTLSLCGIPPLACFWSKDEILN 414
Cdd:MTH00011 232 MSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIE 264
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
200-414 |
2.95e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 40.58 E-value: 2.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 200 LFEIFNNLIYNNEVNFLFVTLCAVLLFVgavaKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFrVI 279
Cdd:MTH00160 72 LFSIILNMLNLMLFNNISSMLINSSLLL----KLGAAPFHFWFPEVMEGLSWINCFI---------LMTWQKIAPLI-LL 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 280 PYIMY--LISIIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLIthaYSKALLFLgsgsiih 357
Cdd:MTH00160 138 SYLINnnFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLI---YSIISLSI------- 207
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 3914186 358 smetIVGYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILN 414
Cdd:MTH00160 208 ----ILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQ 260
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
36-445 |
9.65e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 39.19 E-value: 9.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 36 SVLLLSIVMIFSIYLSIQQ------INSSSFSQYVWSWIINNDFSLDFGYL-----IDPLTSIM**LITTVGIMVLIYSD 104
Cdd:MTH00044 3 TLILLSLGIAITSWIVPKNklwpisISQSSLISLLSLFLLNNHWSSSWHNLslslaTDSLSSPLIILSCWLAPLSLLASI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 105 NYMAHDQGYLR--FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLL 182
Cdd:MTH00044 83 NHLSNNSPNNQrtFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 183 LGILGFYWITGSfefrdLFEIFNNLIYNNEVNFLFVTLCAVLLFVGAVAKSAQFPLHVWLPDA-MEGPTPISaLIHAATM 261
Cdd:MTH00044 163 ISLIAIYSSSSS-----LSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS-MILAAIL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 262 VAAGIFLVARLLPLFRVIpyIMYLISIIGIITVLLGATLA----LAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---A 334
Cdd:MTH00044 237 LKLGGYGLIRLINLFSLP--SANNISFILIVFCCWGALITsiicLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGingA 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3914186 335 LFHLITHAYSKALLFlgsgsiihSMETIVgYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILN 414
Cdd:MTH00044 315 LILMIAHGLVSSALF--------CLANIL-YERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIIS 385
|
410 420 430
....*....|....*....|....*....|.
gi 3914186 415 DSWLYSPIFAIIAWATAGLTAFYMFRIYLLT 445
Cdd:MTH00044 386 SIISWSILSFPIIGLATVFGAIYSLLIYQLT 416
|
|
| |
