|
Name |
Accession |
Description |
Interval |
E-value |
| malG |
PRK10998 |
maltose ABC transporter permease MalG; |
1-296 |
0e+00 |
|
maltose ABC transporter permease MalG;
Pssm-ID: 182891 Cd Length: 296 Bit Score: 565.10 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 1 MAMVQPKSQKLRLFITHLGLLIFIAAIMFPLLMVIAISLREGNFATGSLIPDKISWEHWRLALGFSVEHADGRVTPPPFP 80
Cdd:PRK10998 1 MAMVQPKSQKLRLFATHLLLLGFIALIMFPLLMVIAISLREGNFATGSLIPEQISWEHWKLALGFSVEHADGRVTPPPFP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 81 VLLWLWNSVKIAGITAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160
Cdd:PRK10998 81 VLLWLWNSVKVAGITAIGIVALSTTCAYAFARMRFKGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 161 GVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
Cdd:PRK10998 161 GVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1334564047 241 DSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITLVFLLAQRWLVNGLTAGGVKG 296
Cdd:PRK10998 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITVVFLLAQRWLVGGLTAGGVKG 296
|
|
| MalG |
COG3833 |
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ... |
3-296 |
1.52e-118 |
|
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];
Pssm-ID: 443045 [Multi-domain] Cd Length: 282 Bit Score: 341.75 E-value: 1.52e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 3 MVQPKSQKLRLFITHLGLLIFIAAIMFPLLMVIAISLREGNF-ATGSLIPDKISWEHWRLALGfsvehadgrvtppPFPV 81
Cdd:COG3833 5 KSRKRRRRLKLGLRHLVLIILAIIALFPILWVVSASFNPGGSlYSSSLIPENFTLENYKKLFT-------------ETPF 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 82 LLWLWNSVKIAGITAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQyipfigLNTHGG 161
Cdd:COG3833 72 LRWFLNSLIVAVVTAIISVFLAALAAYAFSRFRFKGRKAGLLALLLLQMFPAFLALVALYLLLSALGL------LNTLLG 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 162 VIFAYLGG-IALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
Cdd:COG3833 146 LILVYLGGaIPFNTWLMKGYFDTIPKELDEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDFILASVLLRSP 225
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1334564047 241 DSYTLAVGMQQYLNPQ-NYLWGDFAAAAVLSAIPITLVFLLAQRWLVNGLTAGGVKG 296
Cdd:COG3833 226 ENYTLAVGLYSFVSDQrNTNWGVFAAGAVLVAIPIVILFLFLQRYLVSGLTAGGVKG 282
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
85-274 |
3.60e-19 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 83.10 E-value: 3.60e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 85 LWNSVKIAGITAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLnTHGGVIF 164
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGL-GLPALIL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 165 AYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVDSYT 244
Cdd:cd06261 80 ALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGP 159
|
170 180 190
....*....|....*....|....*....|
gi 1334564047 245 LAVGMQQYLNPQNYLWGDFAAAAVLSAIPI 274
Cdd:cd06261 160 GTGLLLIFAILFPGDLGVAAAVALILLLLS 189
|
|
| 3a0106s02 |
TIGR00969 |
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ... |
85-279 |
1.37e-08 |
|
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]
Pssm-ID: 273370 Cd Length: 271 Bit Score: 54.67 E-value: 1.37e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 85 LWNSVKIAGITAIGIVALSTTCAYAFARMRFPGKATLLKGM-LIFQMFPAV--LSLVALYALFDRLGQYIPFIGLNthgg 161
Cdd:TIGR00969 62 YNLTLLMALIAVPLNGVFGLLIAWVLTRYQFPGRKLLDALIdLPFALSPVVagLTLALLYGSNGWLGSWLASFGIQ---- 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 162 VIFAYLG--------GIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVA 233
Cdd:TIGR00969 138 IIFTWPGmalamifvSLPFVVREVQPVLEELGTEAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAV 217
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1334564047 234 SLLLRDVDSYTLAVGMQQYLNPQNYLW-GDFAAAAVLSAIPITLVFL 279
Cdd:TIGR00969 218 VVVSGNIPGKTLTLPLLIEERLEQYDYpGAYVIAAVLLLVSLVTLFL 264
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
125-286 |
1.89e-07 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 50.38 E-value: 1.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 125 MLIFQMFPAVLSLVALYALFDRLGqyipfIGLNTHGGVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFR 204
Cdd:pfam00528 24 IDLLQALPSFVLAILLVVIAILSI-----LGHGILPAIILALLGWAGYARLIRRAALRSLPSDLVEAARALGASRWQIFR 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 205 LVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVDSYTLAVGMQQYLNPQNYLWGdfAAAAVLSAIPITLVFLLAQRW 284
Cdd:pfam00528 99 KIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGLGLLLIEAILGYDYPEIQGP--VLAAALILLLLNLLVDILQRL 176
|
..
gi 1334564047 285 LV 286
Cdd:pfam00528 177 LD 178
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| malG |
PRK10998 |
maltose ABC transporter permease MalG; |
1-296 |
0e+00 |
|
maltose ABC transporter permease MalG;
Pssm-ID: 182891 Cd Length: 296 Bit Score: 565.10 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 1 MAMVQPKSQKLRLFITHLGLLIFIAAIMFPLLMVIAISLREGNFATGSLIPDKISWEHWRLALGFSVEHADGRVTPPPFP 80
Cdd:PRK10998 1 MAMVQPKSQKLRLFATHLLLLGFIALIMFPLLMVIAISLREGNFATGSLIPEQISWEHWKLALGFSVEHADGRVTPPPFP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 81 VLLWLWNSVKIAGITAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160
Cdd:PRK10998 81 VLLWLWNSVKVAGITAIGIVALSTTCAYAFARMRFKGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 161 GVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
Cdd:PRK10998 161 GVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1334564047 241 DSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITLVFLLAQRWLVNGLTAGGVKG 296
Cdd:PRK10998 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITVVFLLAQRWLVGGLTAGGVKG 296
|
|
| MalG |
COG3833 |
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ... |
3-296 |
1.52e-118 |
|
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];
Pssm-ID: 443045 [Multi-domain] Cd Length: 282 Bit Score: 341.75 E-value: 1.52e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 3 MVQPKSQKLRLFITHLGLLIFIAAIMFPLLMVIAISLREGNF-ATGSLIPDKISWEHWRLALGfsvehadgrvtppPFPV 81
Cdd:COG3833 5 KSRKRRRRLKLGLRHLVLIILAIIALFPILWVVSASFNPGGSlYSSSLIPENFTLENYKKLFT-------------ETPF 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 82 LLWLWNSVKIAGITAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQyipfigLNTHGG 161
Cdd:COG3833 72 LRWFLNSLIVAVVTAIISVFLAALAAYAFSRFRFKGRKAGLLALLLLQMFPAFLALVALYLLLSALGL------LNTLLG 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 162 VIFAYLGG-IALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
Cdd:COG3833 146 LILVYLGGaIPFNTWLMKGYFDTIPKELDEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDFILASVLLRSP 225
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1334564047 241 DSYTLAVGMQQYLNPQ-NYLWGDFAAAAVLSAIPITLVFLLAQRWLVNGLTAGGVKG 296
Cdd:COG3833 226 ENYTLAVGLYSFVSDQrNTNWGVFAAGAVLVAIPIVILFLFLQRYLVSGLTAGGVKG 282
|
|
| UgpE |
COG0395 |
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ... |
6-296 |
9.61e-71 |
|
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440164 [Multi-domain] Cd Length: 282 Bit Score: 219.97 E-value: 9.61e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 6 PKSQKLRLFITHLGLLIFIAAIMFPLLMVIAISLREGN--FATG-SLIPDKISWEHWRLALGFSvehadgrvtpppfPVL 82
Cdd:COG0395 7 RRRRRLGRILLYLLLILLALLFLFPLYWMVVTSFKPPAeiFSGPpSLLPSEFTLENYRAAFTDG-------------PFG 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 83 LWLWNSVKIAGITAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQyipfigLNTHGGV 162
Cdd:COG0395 74 RYLLNSLIVAVVSTVLSLLLSSLAAYALARFRFRGRKLLFLLILATLMIPGQVLLIPLYLLFRQLGL------LNTYWGL 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 163 IFAYLG-GIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVD 241
Cdd:COG0395 148 ILPYLAfGLPFGIFLLRQFFRSIPRELEEAARIDGASEFRIFWRIVLPLSKPALATVAIFTFIGAWNDFLWPLILLTSPD 227
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1334564047 242 SYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITLVFLLAQRWLVNGLTAGGVKG 296
Cdd:COG0395 228 LRTLPVGLASFQGQYGTDWGLLMAAAVIATLPVLILFLFLQRYFVRGLTAGAVKG 282
|
|
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
8-285 |
5.03e-27 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 105.96 E-value: 5.03e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 8 SQKLRLFITHLGLLIFIAAIMFPLLMVIAISLREGNFATgsLIPDKISWEHWRLALgfsvehADGRVTPPpfpvllwLWN 87
Cdd:COG1177 1 SSRLGRLLLRLFLALVLLFLYLPILVLVLYSFNDSWFLT--FPPEGFTLRWYAELF------SDPRLLDA-------LLN 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 88 SVKIAGITAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYipfiglNTHGGVIFAYL 167
Cdd:COG1177 66 SLLIALLSTLLATVLGTPAALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLS------GGLWGLILAHV 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 168 -GGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVaSLLLRDVDSYTLA 246
Cdd:COG1177 140 vFTLPFVVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVI-TLFLAGPGVTTLP 218
|
250 260 270
....*....|....*....|....*....|....*....
gi 1334564047 247 VGMQQYLNPQNYLWGdfAAAAVLSAIPITLVFLLAQRWL 285
Cdd:COG1177 219 VYIYSMIRRGISPEI--NALSTLLILLSLLLLLLAERLR 255
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
10-285 |
2.36e-22 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 96.38 E-value: 2.36e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 10 KLRLFITHLGLLIFIAAIMFPLLMVIAISLRegnfatgSLIPDKISWEHWRLALGFSVehadgrvtpppfpVLLWLWNSV 89
Cdd:COG1178 285 RWRWLALALCLLLVLLGLLLPLLALLLWSLT-------KALDDNLTLDNYRFVLLDPS-------------LLRALLNSL 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 90 KIAGITAIGIVALSTTCAYAFARMRFPGKATLLK-GMLIFQMFPAVLSLvalyALFDRLGQYIPFIGLNTHGGVIFAY-L 167
Cdd:COG1178 345 LLALLAALLAVLLALLLAYLVRRRRGRLARLLDRlAMLPYAVPGIVLGL----GLLLLFNRPLPLLLYGTLAILVLAYvV 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 168 GGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPvASLLLRDVDSYTLAV 247
Cdd:COG1178 421 RFLPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKELS-ATLLLRPPGFETLAV 499
|
250 260 270
....*....|....*....|....*....|....*...
gi 1334564047 248 GMQQYLnpQNYLWGDFAAAAVLSAIPITLVFLLAQRWL 285
Cdd:COG1178 500 LIYQLA--SSGRYGEAAALALLLVLVSLLPVLLLERLL 535
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
85-296 |
1.35e-21 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 94.46 E-value: 1.35e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 85 LWNSVKIAGITAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQY---------IPFIG 155
Cdd:COG1178 56 LGNTLLLALLVTLLSLLLGVPLAWLLARTDFPGRRLLRWLLLLPLALPPYVVALAWIALFGPNGLLntllralfgLEPPD 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 156 LNTHGGVIFAY-LGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVAS 234
Cdd:COG1178 136 IYGLGGIILVLvLFNYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPL 215
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1334564047 235 LLLRDVDsyTLAVGMQQYLNPQnylwGDFAAAAVLSAI--PITLVFLLAQRWLVNGLTAGGVKG 296
Cdd:COG1178 216 VLGGGYT--TLTTAIYQAWLGD----FDLGAAAALALVllLLVLLLLLLERRLRRRRRYATVGG 273
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
85-274 |
3.60e-19 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 83.10 E-value: 3.60e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 85 LWNSVKIAGITAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLnTHGGVIF 164
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGL-GLPALIL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 165 AYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVDSYT 244
Cdd:cd06261 80 ALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGP 159
|
170 180 190
....*....|....*....|....*....|
gi 1334564047 245 LAVGMQQYLNPQNYLWGDFAAAAVLSAIPI 274
Cdd:cd06261 160 GTGLLLIFAILFPGDLGVAAAVALILLLLS 189
|
|
| PotB |
COG1176 |
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ... |
1-293 |
3.31e-17 |
|
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];
Pssm-ID: 440789 [Multi-domain] Cd Length: 287 Bit Score: 79.81 E-value: 3.31e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 1 MAMVQPKSQKLRLFIThLGLLIFIAAIMFPLLMVIAISLREGNFATGslIPDKISWEHWRLALGFSVEHADgrvtpppfp 80
Cdd:COG1176 1 MSAALRRRLRPLLLLL-PALLWLLLFFVLPLLLLLVYSFTTRDPYGG--VVPGFTLENYARLFTDPLYLKV--------- 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 81 vllwLWNSVKIAGITAIGIVALSTTCAYAFARMRFPGKATLLkGMLIFQMFpaVLSLVALYA---------LFDRLGQYI 151
Cdd:COG1176 69 ----LLRTLWIALLTTLICLLLGYPIAYFLARAPPRWRNLLL-LLVILPFW--TSFLVRTYAwivllgrngLLNSLLLAL 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 152 PFIG-----LNTHGGVIFAYLggialHVW------TIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFI 220
Cdd:COG1176 142 GLIDeplrlLYTEFAVVIGLV-----YVYlpfmvlPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSL 216
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1334564047 221 LSFIAAITEVpVASLLLRDVDSYTLAVGMQQYLNPQNylwgDFAAAAVLSAIP--ITLVFLLAQRWLVNGLTAGG 293
Cdd:COG1176 217 LVFIPALGAF-VTPALLGGGKVLMIGNLIYQQFLSAL----NWPLAAALAVVLllIVLLVLLLYLRLLRRRRLLG 286
|
|
| CysU |
COG0555 |
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ... |
85-229 |
1.55e-15 |
|
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440321 [Multi-domain] Cd Length: 268 Bit Score: 74.79 E-value: 1.55e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 85 LWNSVKIAGITAIGIVALSTTCAYAFARMRFPGKAtLLKGM--LIFQMFPAV--LSLVALYALFDRLGQYIPFIGLNthg 160
Cdd:COG0555 56 LKLSLGTALIAALINLVFGLPLAWVLVRYRFPGKR-LVDALvdLPFALPTAVagIALLLLFGPNGWLGQLLAPLGIK--- 131
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1334564047 161 gVIFAYLG--------GIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITE 229
Cdd:COG0555 132 -VAFTPLGivlaqtfvSLPFVVRTVQPVLEELDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGE 207
|
|
| PRK10973 |
PRK10973 |
sn-glycerol-3-phosphate ABC transporter permease UgpE; |
17-289 |
1.82e-14 |
|
sn-glycerol-3-phosphate ABC transporter permease UgpE;
Pssm-ID: 182875 [Multi-domain] Cd Length: 281 Bit Score: 72.08 E-value: 1.82e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 17 HLGLLIFIAAIMFPLLMV-IAISLREGNFATG--SLIPDKISWEHWRlalgfSVEHADGRVTPPPFPVLLWlwNSVKIAG 93
Cdd:PRK10973 13 HTMLILGIAVILFPLYVAfVAATLDKQAVFAVpmTLIPGTHLLENIA-----NIWVNGVGNNSAPFGRMLL--NSFVMAF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 94 ITAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQyipfigLNTHGGVIFAYLGGiALH 173
Cdd:PRK10973 86 SITVGKITVSMLSAFAIVWFRFPLRNLFFWMIFITLMLPVEVRIFPTVEVIANLKM------LDSYAGLTLPLMAS-ATA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 174 VWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVDSYTLAVGMQQYL 253
Cdd:PRK10973 159 TFLFRQFFMTLPDELVEAARIDGASPMRFFWDIVLPLSKTNLAALFVITFIYGWNQYLWPLLIITDVSLGTAVAGIKGMI 238
|
250 260 270
....*....|....*....|....*....|....*...
gi 1334564047 254 NPQNYL--WGDFAAAAVLSAIPITLVFLLAQRWLVNGL 289
Cdd:PRK10973 239 ATGEGTteWNQVMAAMLLTLIPPVVIVLAMQRAFVRGL 276
|
|
| modB |
PRK09421 |
molybdate ABC transporter permease subunit; |
88-229 |
2.27e-10 |
|
molybdate ABC transporter permease subunit;
Pssm-ID: 181841 Cd Length: 229 Bit Score: 59.55 E-value: 2.27e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 88 SVKIAGITAIGIVALSTTCAYAFARMRFPGKAtLLKGMLIFQM-FPAVLSLVALYALFDRLGqyipFIG--LNTHGGVIF 164
Cdd:PRK09421 14 SLKVSSVAVLFSLPFGILVAWLLARCRFPGKS-LLDSLLHLPLvLPPVVTGYLLLISMGRRG----FIGqwLYEWFGISF 88
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1334564047 165 AY----------LGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITE 229
Cdd:PRK09421 89 AFswrgaalaaaVMAFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGE 163
|
|
| UgpA |
COG1175 |
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; |
20-226 |
1.56e-09 |
|
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440788 [Multi-domain] Cd Length: 298 Bit Score: 57.84 E-value: 1.56e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 20 LLIFIAAIMFPLLMVIAISLREGNFATGSliPDKISWEHWRLALgfsvehADGRvtpppfpvlLW--LWNSVKIAGITAI 97
Cdd:COG1175 28 LLLLLVFVLYPLLYTLYLSFTDWNLLGPP--PEFVGLDNYARLF------TDPR---------FWnaLGNTLLFTVVSVP 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 98 GIVALSTTCAYAFARmRFPGKaTLLKGMLIFqmfPAVLSLVAL----YALFDR----LGQYIPFIGLNTH---GGVIFAY 166
Cdd:COG1175 91 LQLVLGLLLALLLNR-KLRGR-GFFRTLFFL---PWVISPVVValiwKWLFNPdyglLNALLGALGLEPInwlGDPSLAL 165
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1334564047 167 LGGIALHVWTIKGYF--------ETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAA 226
Cdd:COG1175 166 PAVIIVTVWKGTGFNmliflaglQSIPRELYEAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIGA 233
|
|
| 3a0106s02 |
TIGR00969 |
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ... |
85-279 |
1.37e-08 |
|
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]
Pssm-ID: 273370 Cd Length: 271 Bit Score: 54.67 E-value: 1.37e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 85 LWNSVKIAGITAIGIVALSTTCAYAFARMRFPGKATLLKGM-LIFQMFPAV--LSLVALYALFDRLGQYIPFIGLNthgg 161
Cdd:TIGR00969 62 YNLTLLMALIAVPLNGVFGLLIAWVLTRYQFPGRKLLDALIdLPFALSPVVagLTLALLYGSNGWLGSWLASFGIQ---- 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 162 VIFAYLG--------GIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVA 233
Cdd:TIGR00969 138 IIFTWPGmalamifvSLPFVVREVQPVLEELGTEAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAV 217
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1334564047 234 SLLLRDVDSYTLAVGMQQYLNPQNYLW-GDFAAAAVLSAIPITLVFL 279
Cdd:TIGR00969 218 VVVSGNIPGKTLTLPLLIEERLEQYDYpGAYVIAAVLLLVSLVTLFL 264
|
|
| potC |
PRK09500 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
86-234 |
3.91e-08 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 236542 [Multi-domain] Cd Length: 256 Bit Score: 53.06 E-value: 3.91e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 86 WNSVKIAGITAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLnthggvIFA 165
Cdd:PRK09500 60 QHSLTMAVFSATFATLIGSLTAVALYRYRFRGKKFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSL------LFA 133
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 166 YLG-GIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVAS 234
Cdd:PRK09500 134 HITfCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLALPAVAAGWLLSFTLSLDDVVVSS 203
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
125-286 |
1.89e-07 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 50.38 E-value: 1.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 125 MLIFQMFPAVLSLVALYALFDRLGqyipfIGLNTHGGVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFR 204
Cdd:pfam00528 24 IDLLQALPSFVLAILLVVIAILSI-----LGHGILPAIILALLGWAGYARLIRRAALRSLPSDLVEAARALGASRWQIFR 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 205 LVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVDSYTLAVGMQQYLNPQNYLWGdfAAAAVLSAIPITLVFLLAQRW 284
Cdd:pfam00528 99 KIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGLGLLLIEAILGYDYPEIQGP--VLAAALILLLLNLLVDILQRL 176
|
..
gi 1334564047 285 LV 286
Cdd:pfam00528 177 LD 178
|
|
| PhnU2 |
TIGR03262 |
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ... |
85-291 |
2.00e-07 |
|
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 274495 [Multi-domain] Cd Length: 546 Bit Score: 51.99 E-value: 2.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 85 LWNSVKIAGITAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGlnthGGVIF 164
Cdd:TIGR03262 56 LGNSLTVSAIVTAIVVPLAFAFAYALTRSRIPGKGAFRLVALLPLLAPSLLPAISLIYLFGNQGLLKGLLG----GFSIY 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 165 AYLG-GIALHVWT-------IKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLL 236
Cdd:TIGR03262 132 GFWGiVIGEVFYTfphalmiLVTALSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDFGVPKVI 211
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1334564047 237 LRDVDSYTLAVgMQQYLNPQNYLWGdfAAAAVLSAIPITLVFLL---AQRWLVNGLTA 291
Cdd:TIGR03262 212 GGDYNVLATDI-YKQVIGQQNFPMG--AVVGVLLLLPALLAFGIdraIQRRQRAQLSS 266
|
|
| cysT |
CHL00187 |
sulfate transport protein; Provisional |
80-229 |
2.91e-07 |
|
sulfate transport protein; Provisional
Pssm-ID: 214388 [Multi-domain] Cd Length: 237 Bit Score: 50.40 E-value: 2.91e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 80 PVLLWLWN-SVKIAGITAIGIVALSTTCAYAFARMRFPGKATLLKGM-LIFQMFPAV--LSLVALYALFDRLGQYIPFIG 155
Cdd:CHL00187 51 PIALSAYSlTLSMALIAALINGFFGLLIAWVLVRYNFPGKRLLDAAVdLPFALPTSVagLTLATVYGDNGWIGHLLSHLG 130
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1334564047 156 LN---THGGVIFAYL-GGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITE 229
Cdd:CHL00187 131 IQivfTKLGVLLAMIfVSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAIGE 208
|
|
| permease_CysT |
TIGR02139 |
sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two ... |
81-229 |
8.78e-07 |
|
sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]
Pssm-ID: 131194 Cd Length: 265 Bit Score: 49.25 E-value: 8.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 81 VLLWLWNSVKIAGITAIGIVALSTTCAYAFARMRFPGKaTLLKGM--LIFQMFPAV--LSLVALYALFDRLGQYIPFIGL 156
Cdd:TIGR02139 48 VLAAYKLSFGTALIAALINAVFGTLLAWVLVRYRFPGK-RIVDALvdLPFALPTAVagIALATLYSPNGWIGSFLAPLGI 126
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1334564047 157 N---THGGVIFAYL-GGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITE 229
Cdd:TIGR02139 127 KiafTPLGIVIALVfVSLPFVVRTVQPVLEEIEKELEEAAASLGASRWQTFWRVILPALLPALLTGFALAFARAVGE 203
|
|
| PRK10971 |
PRK10971 |
sulfate/thiosulfate ABC transporter permease CysT; |
92-280 |
2.82e-05 |
|
sulfate/thiosulfate ABC transporter permease CysT;
Pssm-ID: 182873 Cd Length: 277 Bit Score: 44.74 E-value: 2.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 92 AGITAIGIVALSTTCAYAFARMRFPGKaTLLKGM--LIFQMFPAV--LSLVALYALFDRLGQYIPFIGLNthggVIFAYL 167
Cdd:PRK10971 67 AFVASIFNAVFGLLMAWILTRYRFPGR-TLLDALmdLPFALPTAVagLTLASLFSVNGWYGEWLAKFDIK----VTYTWL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 168 G--------GIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRD 239
Cdd:PRK10971 142 GiavamaftSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIAGN 221
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1334564047 240 VDSYTLAVGMQQYLNPQNYlwgDF-AAAAVLSAIPITLVFLL 280
Cdd:PRK10971 222 IAWKTEVTSLMIFVRLQEF---DYpAASAIASVILAASLLLL 260
|
|
| cysW |
PRK11602 |
sulfate/thiosulfate ABC transporter permease CysW; |
85-279 |
7.74e-04 |
|
sulfate/thiosulfate ABC transporter permease CysW;
Pssm-ID: 183225 Cd Length: 283 Bit Score: 40.51 E-value: 7.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 85 LWNSVKIAGITAIGIVALSTTCAYAFARMRFPGKATLLKGMLI-FQMFPAVLSLvaLYALFdrLGQYIPFIG-LNTHGGV 162
Cdd:PRK11602 66 IWLTVLIALIAVPVNLVFGILLAWLVTRFNFPGRQLLLTLLDIpFAVSPVVAGL--VYLLF--YGSNGPLGGwLDEHNLQ 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 163 IFAYLGGIALHVWTIKGYFETID---------SSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVA 233
Cdd:PRK11602 142 LMFSWPGMVLVTIFVTCPFVVRElvpvmlsqgSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAV 221
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1334564047 234 SLLLRDVDSYTLAVGMQQYLNPQNY-LWGDFAAAAVLSAIPITLVFL 279
Cdd:PRK11602 222 SVVSGSIRGETLSLPLQIELLEQDYnTVGSFTAAALLTLMAIITLFL 268
|
|
| LplB |
COG4209 |
ABC-type polysaccharide transport system, permease component [Carbohydrate transport and ... |
183-222 |
1.03e-03 |
|
ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 443357 [Multi-domain] Cd Length: 316 Bit Score: 40.07 E-value: 1.03e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 1334564047 183 TIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILS 222
Cdd:COG4209 202 GIDPELYEAAAIDGAGRWQQIWHITLPGIRPTIVILLILN 241
|
|
| malF |
PRK10999 |
maltose ABC transporter permease MalF; |
179-223 |
2.52e-03 |
|
maltose ABC transporter permease MalF;
Pssm-ID: 236816 [Multi-domain] Cd Length: 520 Bit Score: 39.17 E-value: 2.52e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 1334564047 179 GYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSF 223
Cdd:PRK10999 396 GLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASF 440
|
|
| PRK15050 |
PRK15050 |
2-aminoethylphosphonate transport system permease PhnU; Provisional |
85-229 |
2.52e-03 |
|
2-aminoethylphosphonate transport system permease PhnU; Provisional
Pssm-ID: 237888 [Multi-domain] Cd Length: 296 Bit Score: 38.83 E-value: 2.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 85 LWNSVKIAGITAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLG------------QYIP 152
Cdd:PRK15050 75 LLTTLQIAFASTAGCLVLGVLLALVLAFVPFPGASLVGRFIDTFVAFPSFLITLAFTFLYGSAGsvnialqrlfglEAPP 154
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1334564047 153 FIGLNTHGGVIFAYLGGIA-LHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITE 229
Cdd:PRK15050 155 LDFLYSPGGVILAEITFYTpFVVRPLLAAFAQLDARQLEAAASLGASPWRVARRVILPEAWPALAAGGSLCLLLTLNE 232
|
|
| PhnU2 |
TIGR03262 |
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ... |
86-287 |
8.26e-03 |
|
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 274495 [Multi-domain] Cd Length: 546 Bit Score: 37.74 E-value: 8.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 86 WNSVKIAGITAIGIVALSTTCAYAFARMRFPGKatLLKGMLIFQMFP-AVLSLValyalfdrLG-QYIPFigLNTHGGVI 163
Cdd:TIGR03262 335 KNSLRLAATTALIGTILVFGGAYLIEKTRGFGL--LRGVLRFLAILPmAVPGLV--------LGlGYIFF--FNAPTNPL 402
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334564047 164 FAYLGGIALHVW-TIKGYFET-----------IDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVP 231
Cdd:TIGR03262 403 NGLYGTMALLVLcTVVHFYTVshltavtalkqIDSEFEAVSASLKVPFYKTFLRVTLPVCLPAILDIARYLFVNSMTTVS 482
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1334564047 232 vASLLLRDVDSYTLAVGMqqyLNPQNYlwGDFAAAA------VLSAIPITLVFLLAQRWLVN 287
Cdd:TIGR03262 483 -AVVFLYSPDTKLASVAI---LNMDDA--GDIAPAAamatliVLTSAVAKLLFALASRRLLR 538
|
|
| |
