|
Name |
Accession |
Description |
Interval |
E-value |
| 8a0101 |
TIGR00998 |
efflux pump membrane protein (multidrug resistance protein A); [Transport and binding proteins, ... |
14-338 |
1.08e-180 |
|
efflux pump membrane protein (multidrug resistance protein A); [Transport and binding proteins, Other]
Pssm-ID: 273385 [Multi-domain] Cd Length: 334 Bit Score: 505.10 E-value: 1.08e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 14 RKYFSLLAVVLFIAFSGAYV-YWSMELEDMISTDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATI 92
Cdd:TIGR00998 1 RKYFLLLLVVLLIVVAGAYAiYWFLVLRDYESTDDAYVKANQLQVSSQVSGSVIEVNVDDTDYVKQGDVLVRLDPTNAEL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 93 ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLE-------DYNRRVPLAKQGVISKETLEHTKDTLISSKA 165
Cdd:TIGR00998 81 ALAKAEANLAALVRQTKQLEITVQQLQAKVESLKIKLEQAREkllqaelDLRRRVPLFKKGLISREELDHARKALLSAKA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 166 ALNAAIQ-AYKANKALVMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVVPARQ 244
Cdd:TIGR00998 161 ALNAAIQeQLNANQALVRGTPLKKQPAVQEAKERLKTAWLALKRTVIRAPFDGYVARRFVQVGQVVSPGQPLMAVVPAEQ 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 245 MWVNANFKETQLTDVRIGQSVNIISDLYGENVVFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQRVPVEVSLDPKELM 324
Cdd:TIGR00998 241 MYVEANFKETQLKNVRIGQPVTIRSDLYGSDVVFEGKVTGISMGTGSAFSLLPAQNATGNWIKVVQRLPVRIKLDPKELD 320
|
330
....*....|....
gi 1271649079 325 EHPLRIGLSMTATI 338
Cdd:TIGR00998 321 EHPLRIGLSAEVEI 334
|
|
| PRK15136 |
PRK15136 |
multidrug efflux MFS transporter periplasmic adaptor subunit EmrA; |
3-384 |
2.26e-173 |
|
multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;
Pssm-ID: 185090 [Multi-domain] Cd Length: 390 Bit Score: 488.82 E-value: 2.26e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 3 QINSNKKhsNRRKYFSLLAVVLFIAFSGAY-VYWSMELEDMISTDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDI 81
Cdd:PRK15136 11 QQPVKKK--GKRKRALLLLTLLFIIIGVAYgIYWFLVLRHHQETDDAYVAGNQVQIMSQVSGSVTKVWADNTDFVKEGDV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 82 LVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLI 161
Cdd:PRK15136 89 LVTLDPTDAEQAFEKAKTALANSVRQTHQLMINSKQYQANIELQKTALAQAQSDLNRRVPLGNANLIGREELQHARDAVA 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 162 SSKAALNAAIQAYKANKALVMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVVP 241
Cdd:PRK15136 169 SAQAQLDVAIQQYNANQAMILNTPLEDQPAVQQAATEVRNAWLALQRTKIVSPMTGYVSRRSVQVGAQISPTTPLMAVVP 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 242 ARQMWVNANFKETQLTDVRIGQSVNIISDLYGENVVFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQRVPVEVSLDPK 321
Cdd:PRK15136 249 ATNLWVDANFKETQLANMRIGQPATITSDIYGDDVVYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDAK 328
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1271649079 322 ELMEHPLRIGLSMTATIDTKNEDiaeMPELASTVTSMPAYTSKALVIDTSPIEKEISNIISHN 384
Cdd:PRK15136 329 QLAQHPLRIGLSTLVTVDTANRD---GQVLANQVRSTPAYESNALEIDLAPVNKLIDDIIQAN 388
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
9-341 |
1.59e-81 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 252.66 E-value: 1.59e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 9 KHSNRRKYfsLLAVVLFIAFSGAYVYWSMELEDMISTDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKT 88
Cdd:COG1566 2 KALKKRRL--LALVLLLLALGLALWAAGRNGPDEPVTADGRVEARVVTVAAKVSGRVTEVLVKEGDRVKKGQVLARLDPT 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 89 DATIALNKAKNNLANIVRQTNKLYLQD------KQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLIS 162
Cdd:COG1566 80 DLQAALAQAEAQLAAAEAQLARLEAELgaeaeiAAAEAQLAAAQAQLDLAQRELERYQALYKKGAVSQQELDEARAALDA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 163 SKAALNAAIQAYKANKALV--MNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVV 240
Cdd:COG1566 160 AQAQLEAAQAQLAQAQAGLreEEELAAAQAQVAQAEAALAQAELNLARTTIRAPVDGVVTNLNVEPGEVVSAGQPLLTIV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 241 PARQMWVNANFKETQLTDVRIGQSVNIISDLYGeNVVFHGRVTGINMGTGNAFsllPAQNATGNwikIVQRVPVEVSLDP 320
Cdd:COG1566 240 PLDDLWVEAYVPETDLGRVKPGQPVEVRVDAYP-DRVFEGKVTSISPGAGFTS---PPKNATGN---VVQRYPVRIRLDN 312
|
330 340
....*....|....*....|.
gi 1271649079 321 KELmeHPLRIGLSMTATIDTK 341
Cdd:COG1566 313 PDP--EPLRPGMSATVEIDTE 331
|
|
| CusB_dom_1 |
pfam00529 |
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli ... |
43-340 |
2.85e-68 |
|
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli can be divided into four different domains, the first three domains of the protein are mostly beta-strands and the fourth forms an all alpha-helical domain. This entry represents the first beta-domain (domain 1) of CusB and it is formed by the N and C-terminal ends of the polypeptide (residues 89-102 and 324-385). CusB is part of the copper-transporting efflux system CusCFBA. This domain can also be found in other membrane-fusion proteins, such as HlyD, MdtN, MdtE and AaeA. HlyD is a component of the prototypical alpha-haemolysin (HlyA) bacterial type I secretion system, along with the other components HlyB and TolC. HlyD is anchored in the cytoplasmic membrane by a single transmembrane domain and has a large periplasmic domain within the carboxy-terminal 100 amino acids, HlyB and HlyD form a stable complex that binds the recombinant protein bearing a C-terminal HlyA signal sequence and ATP in the cytoplasm. HlyD, HlyB and TolC combine to form the three-component ABC transporter complex that forms a trans-membrane channel or pore through which HlyA can be transferred directly to the extracellular medium. Cutinase has been shown to be transported effectively through this pore.
Pssm-ID: 425733 [Multi-domain] Cd Length: 322 Bit Score: 218.45 E-value: 2.85e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 43 ISTDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYS--- 119
Cdd:pfam00529 9 EAPGRVVVSGNAKAVQPQVSGIVTRVLVKEGDRVKAGDVLFQLDPTDYQAALDSAEAQLAKAQAQVARLQAELDRLQale 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 120 ---------------------AEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAI------- 171
Cdd:pfam00529 89 selaisrqdydgataqlraaqAAVKAAQAQLAQAQIDLARRRVLAPIGGISRESLVTAGALVAQAQANLLATVaqldqiy 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 172 ----QAYKANKALVMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQV-GETVSPGQSLMAVVPARQMW 246
Cdd:pfam00529 169 vqitQSAAENQAEVRSELSGAQLQIAEAEAELKLAKLDLERTEIRAPVDGTVAFLSVTVdGGTVSAGLRLMFVVPEDNLL 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 247 VNANFKETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGnafsllpaqnatgnwikivqrvPVEVSLDPKELM 324
Cdd:pfam00529 249 VPGMFVETQLDQVRVGQPVLIPFDAFPQTKtgRFTGVVVGISPDTG----------------------PVRVVVDKAQGP 306
|
330
....*....|....*.
gi 1271649079 325 EHPLRIGLSMTATIDT 340
Cdd:pfam00529 307 YYPLRIGLSAGALVRL 322
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| 8a0101 |
TIGR00998 |
efflux pump membrane protein (multidrug resistance protein A); [Transport and binding proteins, ... |
14-338 |
1.08e-180 |
|
efflux pump membrane protein (multidrug resistance protein A); [Transport and binding proteins, Other]
Pssm-ID: 273385 [Multi-domain] Cd Length: 334 Bit Score: 505.10 E-value: 1.08e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 14 RKYFSLLAVVLFIAFSGAYV-YWSMELEDMISTDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATI 92
Cdd:TIGR00998 1 RKYFLLLLVVLLIVVAGAYAiYWFLVLRDYESTDDAYVKANQLQVSSQVSGSVIEVNVDDTDYVKQGDVLVRLDPTNAEL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 93 ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLE-------DYNRRVPLAKQGVISKETLEHTKDTLISSKA 165
Cdd:TIGR00998 81 ALAKAEANLAALVRQTKQLEITVQQLQAKVESLKIKLEQAREkllqaelDLRRRVPLFKKGLISREELDHARKALLSAKA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 166 ALNAAIQ-AYKANKALVMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVVPARQ 244
Cdd:TIGR00998 161 ALNAAIQeQLNANQALVRGTPLKKQPAVQEAKERLKTAWLALKRTVIRAPFDGYVARRFVQVGQVVSPGQPLMAVVPAEQ 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 245 MWVNANFKETQLTDVRIGQSVNIISDLYGENVVFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQRVPVEVSLDPKELM 324
Cdd:TIGR00998 241 MYVEANFKETQLKNVRIGQPVTIRSDLYGSDVVFEGKVTGISMGTGSAFSLLPAQNATGNWIKVVQRLPVRIKLDPKELD 320
|
330
....*....|....
gi 1271649079 325 EHPLRIGLSMTATI 338
Cdd:TIGR00998 321 EHPLRIGLSAEVEI 334
|
|
| PRK15136 |
PRK15136 |
multidrug efflux MFS transporter periplasmic adaptor subunit EmrA; |
3-384 |
2.26e-173 |
|
multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;
Pssm-ID: 185090 [Multi-domain] Cd Length: 390 Bit Score: 488.82 E-value: 2.26e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 3 QINSNKKhsNRRKYFSLLAVVLFIAFSGAY-VYWSMELEDMISTDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDI 81
Cdd:PRK15136 11 QQPVKKK--GKRKRALLLLTLLFIIIGVAYgIYWFLVLRHHQETDDAYVAGNQVQIMSQVSGSVTKVWADNTDFVKEGDV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 82 LVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLI 161
Cdd:PRK15136 89 LVTLDPTDAEQAFEKAKTALANSVRQTHQLMINSKQYQANIELQKTALAQAQSDLNRRVPLGNANLIGREELQHARDAVA 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 162 SSKAALNAAIQAYKANKALVMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVVP 241
Cdd:PRK15136 169 SAQAQLDVAIQQYNANQAMILNTPLEDQPAVQQAATEVRNAWLALQRTKIVSPMTGYVSRRSVQVGAQISPTTPLMAVVP 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 242 ARQMWVNANFKETQLTDVRIGQSVNIISDLYGENVVFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQRVPVEVSLDPK 321
Cdd:PRK15136 249 ATNLWVDANFKETQLANMRIGQPATITSDIYGDDVVYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDAK 328
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1271649079 322 ELMEHPLRIGLSMTATIDTKNEDiaeMPELASTVTSMPAYTSKALVIDTSPIEKEISNIISHN 384
Cdd:PRK15136 329 QLAQHPLRIGLSTLVTVDTANRD---GQVLANQVRSTPAYESNALEIDLAPVNKLIDDIIQAN 388
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
9-341 |
1.59e-81 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 252.66 E-value: 1.59e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 9 KHSNRRKYfsLLAVVLFIAFSGAYVYWSMELEDMISTDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKT 88
Cdd:COG1566 2 KALKKRRL--LALVLLLLALGLALWAAGRNGPDEPVTADGRVEARVVTVAAKVSGRVTEVLVKEGDRVKKGQVLARLDPT 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 89 DATIALNKAKNNLANIVRQTNKLYLQD------KQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLIS 162
Cdd:COG1566 80 DLQAALAQAEAQLAAAEAQLARLEAELgaeaeiAAAEAQLAAAQAQLDLAQRELERYQALYKKGAVSQQELDEARAALDA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 163 SKAALNAAIQAYKANKALV--MNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVV 240
Cdd:COG1566 160 AQAQLEAAQAQLAQAQAGLreEEELAAAQAQVAQAEAALAQAELNLARTTIRAPVDGVVTNLNVEPGEVVSAGQPLLTIV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 241 PARQMWVNANFKETQLTDVRIGQSVNIISDLYGeNVVFHGRVTGINMGTGNAFsllPAQNATGNwikIVQRVPVEVSLDP 320
Cdd:COG1566 240 PLDDLWVEAYVPETDLGRVKPGQPVEVRVDAYP-DRVFEGKVTSISPGAGFTS---PPKNATGN---VVQRYPVRIRLDN 312
|
330 340
....*....|....*....|.
gi 1271649079 321 KELmeHPLRIGLSMTATIDTK 341
Cdd:COG1566 313 PDP--EPLRPGMSATVEIDTE 331
|
|
| CusB_dom_1 |
pfam00529 |
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli ... |
43-340 |
2.85e-68 |
|
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli can be divided into four different domains, the first three domains of the protein are mostly beta-strands and the fourth forms an all alpha-helical domain. This entry represents the first beta-domain (domain 1) of CusB and it is formed by the N and C-terminal ends of the polypeptide (residues 89-102 and 324-385). CusB is part of the copper-transporting efflux system CusCFBA. This domain can also be found in other membrane-fusion proteins, such as HlyD, MdtN, MdtE and AaeA. HlyD is a component of the prototypical alpha-haemolysin (HlyA) bacterial type I secretion system, along with the other components HlyB and TolC. HlyD is anchored in the cytoplasmic membrane by a single transmembrane domain and has a large periplasmic domain within the carboxy-terminal 100 amino acids, HlyB and HlyD form a stable complex that binds the recombinant protein bearing a C-terminal HlyA signal sequence and ATP in the cytoplasm. HlyD, HlyB and TolC combine to form the three-component ABC transporter complex that forms a trans-membrane channel or pore through which HlyA can be transferred directly to the extracellular medium. Cutinase has been shown to be transported effectively through this pore.
Pssm-ID: 425733 [Multi-domain] Cd Length: 322 Bit Score: 218.45 E-value: 2.85e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 43 ISTDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYS--- 119
Cdd:pfam00529 9 EAPGRVVVSGNAKAVQPQVSGIVTRVLVKEGDRVKAGDVLFQLDPTDYQAALDSAEAQLAKAQAQVARLQAELDRLQale 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 120 ---------------------AEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAI------- 171
Cdd:pfam00529 89 selaisrqdydgataqlraaqAAVKAAQAQLAQAQIDLARRRVLAPIGGISRESLVTAGALVAQAQANLLATVaqldqiy 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 172 ----QAYKANKALVMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQV-GETVSPGQSLMAVVPARQMW 246
Cdd:pfam00529 169 vqitQSAAENQAEVRSELSGAQLQIAEAEAELKLAKLDLERTEIRAPVDGTVAFLSVTVdGGTVSAGLRLMFVVPEDNLL 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 247 VNANFKETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGnafsllpaqnatgnwikivqrvPVEVSLDPKELM 324
Cdd:pfam00529 249 VPGMFVETQLDQVRVGQPVLIPFDAFPQTKtgRFTGVVVGISPDTG----------------------PVRVVVDKAQGP 306
|
330
....*....|....*.
gi 1271649079 325 EHPLRIGLSMTATIDT 340
Cdd:pfam00529 307 YYPLRIGLSAGALVRL 322
|
|
| PRK10476 |
PRK10476 |
multidrug transporter subunit MdtN; |
9-338 |
1.22e-43 |
|
multidrug transporter subunit MdtN;
Pssm-ID: 182488 [Multi-domain] Cd Length: 346 Bit Score: 154.80 E-value: 1.22e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 9 KHSNRRKYFSLLAVVLFIAFsGAYVYWsmELEDMISTDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKT 88
Cdd:PRK10476 6 KKSPRKKLPALAIVALAIVA-LVFVIW--RTDSAPSTDDAYIDADVVHVASEVGGRIVELAVTENQAVKKGDLLFRIDPR 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 89 DATIALNKAKNNLANIVRQ--TNKLYLQDKQYSAEVAS-----ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLI 161
Cdd:PRK10476 83 PYELTVAQAQADLALADAQimTTQRSVDAERSNAASANeqverARANAKLATRTLERLEPLLAKGYVSAQQVDQARTAQR 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 162 SSKAALNAAIQAYKANKALVMNT-PLNRQPQVVEAADATKEawLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVV 240
Cdd:PRK10476 163 DAEVSLNQALLQAQAAAAAVGGVdALVAQRAAREAALAIAE--LHLEDTTVRAPFDGRVVGLKVSVGEFAAPMQPIFTLI 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 241 PARQMWVNANFKETQLTDVRIGQSVNIISdLYGENVVFHGRVTGINMG-----TGNAFSLLPAQNATGNWIKIVQRVPVE 315
Cdd:PRK10476 241 DTDHWYAIANFRETDLKNIRVGDCATVYS-MIDRGRPFEGKVDSIGWGvlpddGGNVPRGLPYVPRSINWVRVAQRFPVR 319
|
330 340
....*....|....*....|....*
gi 1271649079 316 VSLD--PKELMehplRIGLSMTATI 338
Cdd:PRK10476 320 IMLDkpDPELF----RIGASAVVEL 340
|
|
| AcrA |
COG0845 |
Multidrug efflux pump subunit AcrA (membrane-fusion protein) [Cell wall/membrane/envelope ... |
56-344 |
6.28e-33 |
|
Multidrug efflux pump subunit AcrA (membrane-fusion protein) [Cell wall/membrane/envelope biogenesis, Defense mechanisms];
Pssm-ID: 440606 [Multi-domain] Cd Length: 324 Bit Score: 125.44 E-value: 6.28e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 56 PISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKnnlanivrqtnklylqdkqysAEVASARIQYQQSLED 135
Cdd:COG0845 25 EVRARVSGRVEEVLVDEGDRVKKGQVLARLDPPDLQAALAQAQ---------------------AQLAAAQAQLELAKAE 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 136 YNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKAlvmntplnrqpqvveaadatkeawlALKRTDIKSPV 215
Cdd:COG0845 84 LERYKALLKKGAVSQQELDQAKAALDQAQAALAAAQAALEQARA-------------------------NLAYTTIRAPF 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 216 TGYIAQRSVQVGETVSPGQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGeNVVFHGRVTGINmgtgnafsl 295
Cdd:COG0845 139 DGVVGERNVEPGQLVSAGTPLFTIADLDPLEVEFDVPESDLARLKVGQPVTVTLDAGP-GKTFEGKVTFID--------- 208
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1271649079 296 lPAQNATgnwikiVQRVPVEVSLDPKelmEHPLRIGLSMTATIDTKNED 344
Cdd:COG0845 209 -PAVDPA------TRTVRVRAELPNP---DGLLRPGMFVRVRIVLGERE 247
|
|
| RND_mfp |
TIGR01730 |
RND family efflux transporter, MFP subunit; This model represents the MFP (membrane fusion ... |
57-282 |
6.85e-21 |
|
RND family efflux transporter, MFP subunit; This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273776 [Multi-domain] Cd Length: 322 Bit Score: 92.38 E-value: 6.85e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 57 ISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANivrqtnklylqdkqysaevasARIQYQQSLEDY 136
Cdd:TIGR01730 29 LAAEVAGKITKISVREGQKVKKGQVLARLDDDDYQLALQAALAQLAA---------------------AEAQLELAQRSF 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 137 NRRVPLAKQGVISKETLEhtkdtliSSKAALNAAIQaykankalvmntplnrqpQVVEAADATKEAWLALKRTDIKSPVT 216
Cdd:TIGR01730 88 ERAERLVKRNAVSQADLD-------DAKAAVEAAQA------------------DLEAAKASLASAQLNLRYTEIRAPFD 142
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1271649079 217 GYIAQRSVQVGETVSPGQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGeNVVFHGRV 282
Cdd:TIGR01730 143 GTIGRRLVEVGAYVTAGQTLATIVDLDPLEADFSVPERDLPQLRRGQTLTVELDALP-GEEFKGKL 207
|
|
| PRK10559 |
PRK10559 |
p-hydroxybenzoic acid efflux pump subunit AaeA; |
19-343 |
7.03e-19 |
|
p-hydroxybenzoic acid efflux pump subunit AaeA;
Pssm-ID: 182548 [Multi-domain] Cd Length: 310 Bit Score: 86.33 E-value: 7.03e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 19 LLAVVLFIAFSGAYVYWSmeleDMISTDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAK 98
Cdd:PRK10559 16 VLVILAFIAIFRAWVFYT----ESPWTRDARFSADVVAIAPDVSGLITQVNVHDNQLVKKGQVLFTIDQPRYQKALAEAE 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 99 NNLAnivrqtnklylqdkQYSAEVASARIQYQqsledynRRVPLAKQgVISKETLEHTKDTLISSKAALNAAIqaykank 178
Cdd:PRK10559 92 ADVA--------------YYQVLAQEKRREAG-------RRNRLGVQ-AMSREEIDQANNVLQTVLHQLAKAQ------- 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 179 alvmntplnrqpqvveaadATKE-AWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVVPARQMWVNANFKETQLT 257
Cdd:PRK10559 143 -------------------ATRDlAKLDLERTVIRAPADGWVTNLNVYTGEFITRGSTAVALVKQNSFYVLAYMEETKLE 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 258 DVRIGQSVNIISdlYGENVVFHGRVTGINMGTGNAFSL-----LPAQNATGNWIKIVQRVPVEVSLDPKelMEHPLRIGL 332
Cdd:PRK10559 204 GVRPGYRAEITP--LGSNKVLKGTVDSVAAGVTNSSSTrdskgMATIDSNLEWVRLAQRVPVRIRLDNQ--QGNLYPAGT 279
|
330
....*....|.
gi 1271649079 333 SMTATIDTKNE 343
Cdd:PRK10559 280 TATVVITGKQD 290
|
|
| PRK03598 |
PRK03598 |
putative efflux pump membrane fusion protein; Provisional |
11-282 |
2.53e-18 |
|
putative efflux pump membrane fusion protein; Provisional
Pssm-ID: 235136 [Multi-domain] Cd Length: 331 Bit Score: 85.01 E-value: 2.53e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 11 SNRRKYFSLLAVVLFIAFSGAYVYWsmeledmISTDDAYVT--GNAD----PISAQVSGSVTVVNHKDTNYVRQGDILVS 84
Cdd:PRK03598 1 MKKKVVIGLAVVVLAAAVAGGWWWY-------QSRQDNGLTlyGNVDirtvNLGFRVGGRLASLAVDEGDAVKAGQVLGE 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 85 LDKTDATIALNKAKNNLAniVRQTNKLYLQDKQYSAEVASARIQYQQSLED-------YNRRVPLAKQGVISKETLEHTK 157
Cdd:PRK03598 74 LDAAPYENALMQAKANVS--VAQAQLDLMLAGYRDEEIAQARAAVKQAQAAydyaqnfYNRQQGLWKSRTISANDLENAR 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 158 DTLISSKAALNAAIQAYKANKALvmntplNRqPQVVEAADATKE--------AWLALKRTDIKSPVTGYIAQRSVQVGET 229
Cdd:PRK03598 152 SSRDQAQATLKSAQDKLSQYREG------NR-PQDIAQAKASLAqaqaalaqAELNLQDTELIAPSDGTILTRAVEPGTM 224
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1271649079 230 VSPGQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGENvVFHGRV 282
Cdd:PRK03598 225 LNAGSTVFTLSLTRPVWVRAYVDERNLGQAQPGRKVLLYTDGRPDK-PYHGQI 276
|
|
| HlyD_D23 |
pfam16576 |
Barrel-sandwich domain of CusB or HlyD membrane-fusion; HlyD_D23 is the combined domains 2 and ... |
207-285 |
1.30e-11 |
|
Barrel-sandwich domain of CusB or HlyD membrane-fusion; HlyD_D23 is the combined domains 2 and 3 of the membrane-fusion proteins CusB and HlyD, which forms a barrel-sandwich. CusB and HlyD proteins are membrane fusion proteins of the CusCFBA copper efflux system in E.coli and related bacteria. The whole molecule hinges between D2 and D3. Efflux systems of this resistance-nodulation-division group - RND - have been developed to excrete poisonous metal ions, and in E.coli the only one that deals with silver and copper is the CusA transporter. The transporter CusA works in conjunction with a periplasmic component that is a membrane fusion protein, eg CusB, and an outer-membrane channel component CusC in a CusABC complex driven by import of protons.
Pssm-ID: 435440 [Multi-domain] Cd Length: 214 Bit Score: 63.29 E-value: 1.30e-11
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1271649079 207 KRTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGeNVVFHGRVTGI 285
Cdd:pfam16576 107 PTVTVYAPISGVVTELNVREGMYVQPGDTLFTIADLSTVWVEADVPEQDLALVKVGQPAEVTLPALP-GKTFEGKVDYI 184
|
|
| type_I_hlyD |
TIGR01843 |
type I secretion membrane fusion protein, HlyD family; Type I secretion is an ABC transport ... |
17-341 |
7.94e-11 |
|
type I secretion membrane fusion protein, HlyD family; Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 130902 [Multi-domain] Cd Length: 423 Bit Score: 63.10 E-value: 7.94e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 17 FSLLAVVLFIAFSGAYVYWSM--ELedmistdDAYVTGNADPIsaqVSGSVTVVNH-----------KDTNYVRQGDILV 83
Cdd:TIGR01843 3 FARLITWLIAGLVVIFFLWAYfaPL-------DVVATATGKVV---PSGNVKVVQHleggivreilvREGDRVKAGQVLV 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 84 SLDKT----DATIALNKAKNNLANIVR---------------------------------------------QTNKLYLQ 114
Cdd:TIGR01843 73 ELDATdveaDAAELESQVLRLEAEVARlraeadsqaaiefpddllsaedpavpelikgqqslfesrkstlraQLELILAQ 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 115 DKQYSAEVAS--ARIQ-YQQSLEDYNRRV----PLAKQGVISK-ETLEHTK---------DTLISSKAALNAAIQAYKAN 177
Cdd:TIGR01843 153 IKQLEAELAGlqAQLQaLRQQLEVISEELearrKLKEKGLVSRlELLELEReraeaqgelGRLEAELEVLKRQIDELQLE 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 178 KALVMNTplnRQPQVVEAADAT-----------KEAWLALKRTDIKSPVTGYIAQRSVQ-VGETVSPGQSLMAVVPARQ- 244
Cdd:TIGR01843 233 RQQIEQT---FREEVLEELTEAqarlaelrerlNKARDRLQRLIIRSPVDGTVQSLKVHtVGGVVQPGETLMEIVPEDDp 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 245 MWVNANFKETQLTDVRIGQSVNIISDlygenvVFHGRVTGINMGTGNAFS--LLPAQNATGNWIkivqrvPVEVSLDPKE 322
Cdd:TIGR01843 310 LEIEAKLSPKDIGFVHVGQPAEIKFS------AFPYRRYGILNGKVKSISpdTFTDERGGGPYY------RVRISIDQNT 377
|
410 420
....*....|....*....|.
gi 1271649079 323 LMEHPLRIGLS--MTATIDTK 341
Cdd:TIGR01843 378 LGIGPKGLELSpgMPVTADIK 398
|
|
| HlyD_3 |
pfam13437 |
HlyD family secretion protein; This is a family of largely bacterial haemolysin translocator ... |
211-331 |
1.08e-09 |
|
HlyD family secretion protein; This is a family of largely bacterial haemolysin translocator HlyD proteins.
Pssm-ID: 433206 [Multi-domain] Cd Length: 104 Bit Score: 55.45 E-value: 1.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 211 IKSPVTGYIAQRSVQVGETVSPGQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGENVVfhgrvtginmgTG 290
Cdd:pfam13437 2 IRAPVDGVVAELNVEEGQVVQAGDPLATIVPPDRLLVEAFVPAADLGSLKKGQKVTLKLDPGSDYTL-----------EG 70
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1271649079 291 NAFSLLPAQNATGnwikivQRVPVEVSLDPkELMEHPLRIG 331
Cdd:pfam13437 71 KVVRISPTVDPDT------GVIPVRVSIEN-PKTPIPLLPG 104
|
|
| heterocyst_DevB |
TIGR02971 |
ABC exporter membrane fusion protein, DevB family; Members of this protein family are found ... |
77-269 |
3.17e-07 |
|
ABC exporter membrane fusion protein, DevB family; Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. DevB from Anabaena sp. strain PCC 7120 is partially characterized as a membrane fusion protein of the DevBCA ABC exporter, probably a glycolipid exporter, required for heterocyst formation. Most Cyanobacteria have one member only, but Nostoc sp. PCC 7120 has seven members.
Pssm-ID: 213754 [Multi-domain] Cd Length: 327 Bit Score: 51.75 E-value: 3.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 77 RQGDILVSLDKTD-ATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVASA-----RIQYQQSL--EDYNRRVPLAKQGVI 148
Cdd:TIGR02971 53 RTAELDVARTQLDeAKARLAQVRAGAKKGEIAAQRAARAAAKLFKDVAAQqatlnRLEAELETaqREVDRYRSLFRDGAV 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 149 SKETLEHTKDTLISSKAALNAAIQ-----------AYKANKALVMNTPLNR-QPQVVEAADATKEAWLALKRTDIKSPVT 216
Cdd:TIGR02971 133 SASDLDSKALKLRTAEEELEEALAsrseqidgaraALASLAEEVRETDVDLaQAEVKSALEAVQQAEALLELTYVKAPID 212
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1271649079 217 GYIAQRSVQVGETVSPgQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIIS 269
Cdd:TIGR02971 213 GRVLKIHAREGEVIGS-EGILEMGDTSQMYAVAEVYETDINRVRVGQRATITS 264
|
|
| Biotin_lipoyl_2 |
pfam13533 |
Biotin-lipoyl like; |
56-102 |
3.23e-06 |
|
Biotin-lipoyl like;
Pssm-ID: 433286 Cd Length: 50 Bit Score: 43.59 E-value: 3.23e-06
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 1271649079 56 PISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLA 102
Cdd:pfam13533 4 KIASPVSGKVVAVNVKEGQQVKKGDVLATLDSPELQLQLQQAEAQLA 50
|
|
| PRK09859 |
PRK09859 |
multidrug transporter subunit MdtE; |
57-243 |
7.17e-06 |
|
multidrug transporter subunit MdtE;
Pssm-ID: 137559 [Multi-domain] Cd Length: 385 Bit Score: 47.79 E-value: 7.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 57 ISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLAnivrqtnklylqdKQYSAeVASARIQyqqsledY 136
Cdd:PRK09859 64 IRPQVGGIIIKRNFIEGDKVNQGDSLYQIDPAPLQAELNSAKGSLA-------------KALST-ASNARIT-------F 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 137 NRRVPLAKQGVISKETLEhtkdtliSSKAALNAAiqaykankalvmntplnrQPQVVEAADATKEAWLALKRTDIKSPVT 216
Cdd:PRK09859 123 NRQASLLKTNYVSRQDYD-------TARTQLNEA------------------EANVTVAKAAVEQATINLQYANVTSPIT 177
|
170 180
....*....|....*....|....*..
gi 1271649079 217 GYIAQRSVQVGETVSPGQSLMAVVPAR 243
Cdd:PRK09859 178 GVSGKSSVTVGALVTANQADSLVTVQR 204
|
|
| PRK11556 |
PRK11556 |
MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit; |
49-240 |
1.86e-03 |
|
MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit;
Pssm-ID: 183194 [Multi-domain] Cd Length: 415 Bit Score: 40.16 E-value: 1.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 49 YVTG-------NADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLAnivrqtnklylQDKqysAE 121
Cdd:PRK11556 75 YLTGlgtvtaaNTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPRPFKVALAQAQGQLA-----------KDQ---AT 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 122 VASARiqyqqslEDYNRRVPLAKQGVISKETLEhTKDTLISSKAAlnaaiqAYKANKALVMNtplnrqpqvveaadatke 201
Cdd:PRK11556 141 LANAR-------RDLARYQQLAKTNLVSRQELD-AQQALVSETEG------TIKADEASVAS------------------ 188
|
170 180 190
....*....|....*....|....*....|....*....
gi 1271649079 202 AWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVV 240
Cdd:PRK11556 189 AQLQLDYSRITAPISGRVGLKQVDVGNQISSGDTTGIVV 227
|
|
| PRK11578 |
PRK11578 |
macrolide transporter subunit MacA; Provisional |
7-263 |
7.37e-03 |
|
macrolide transporter subunit MacA; Provisional
Pssm-ID: 183211 [Multi-domain] Cd Length: 370 Bit Score: 38.22 E-value: 7.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 7 NKKHSNRRKYFSLLAVVLFIAFSGAYV-------YWSMELEDMISTDDAYVTGNADP-----ISAQVSGSVTVVNHKDTN 74
Cdd:PRK11578 2 KKRKKVKKRYLIALVIVLAGGITLWRIlnapvptYQTLIVRPGDLQQSVLATGKLDAlrkvdVGAQVSGQLKTLSVAIGD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 75 YVRQGDILvsldktdATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQqsledynRRVPLAKQGVISKETLe 154
Cdd:PRK11578 82 KVKKDQLL-------GVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTLS-------RQQRLAKTQAVSQQDL- 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1271649079 155 htkDTLISSKAALNAAIQAYKAnkalvmntplnrqpQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQ 234
Cdd:PRK11578 147 ---DTAATELAVKQAQIGTIDA--------------QIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQ 209
|
250 260 270
....*....|....*....|....*....|..
gi 1271649079 235 ---SLMAVVPARQMWVNANFKETQLTDVRIGQ 263
Cdd:PRK11578 210 qapNILTLADMSTMLVKAQVSEADVIHLKPGQ 241
|
|
| |
