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Conserved domains on  [gi|1259702911|gb|PES71869|]
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competence protein ComG [Bacillus cereus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
T4P_ComGE super family cl49152
competence type IV pilus minor pilin ComGE;
1-72 3.04e-08

competence type IV pilus minor pilin ComGE;


The actual alignment was detected with superfamily member NF041013:

Pssm-ID: 468942 [Multi-domain]  Cd Length: 83  Bit Score: 46.42  E-value: 3.04e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1259702911  1 MIVSLSVLMMAVSLLLPQTVLVMQERKNIQIRYKATGLLKKEAAIYMYGNEEKRI-IEKKINGIGYYTYWGGN 72
Cdd:NF041013  11 SLVALALLALIVSLLLPSLTQIQKEREEIKQKEEALQVLYEALQTYQLHLELNGVeITVERSNTQIKVYWEGK 83
 
Name Accession Description Interval E-value
T4P_ComGE NF041013
competence type IV pilus minor pilin ComGE;
1-72 3.04e-08

competence type IV pilus minor pilin ComGE;


Pssm-ID: 468942 [Multi-domain]  Cd Length: 83  Bit Score: 46.42  E-value: 3.04e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1259702911  1 MIVSLSVLMMAVSLLLPQTVLVMQERKNIQIRYKATGLLKKEAAIYMYGNEEKRI-IEKKINGIGYYTYWGGN 72
Cdd:NF041013  11 SLVALALLALIVSLLLPSLTQIQKEREEIKQKEEALQVLYEALQTYQLHLELNGVeITVERSNTQIKVYWEGK 83
 
Name Accession Description Interval E-value
T4P_ComGE NF041013
competence type IV pilus minor pilin ComGE;
1-72 3.04e-08

competence type IV pilus minor pilin ComGE;


Pssm-ID: 468942 [Multi-domain]  Cd Length: 83  Bit Score: 46.42  E-value: 3.04e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1259702911  1 MIVSLSVLMMAVSLLLPQTVLVMQERKNIQIRYKATGLLKKEAAIYMYGNEEKRI-IEKKINGIGYYTYWGGN 72
Cdd:NF041013  11 SLVALALLALIVSLLLPSLTQIQKEREEIKQKEEALQVLYEALQTYQLHLELNGVeITVERSNTQIKVYWEGK 83
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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