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Conserved domains on  [gi|1476413340|sp|P86471|]
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RecName: Full=Defensin Lucifensin; AltName: Full=Sericasin; Flags: Precursor

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DEFL_defensin-like cd21806
defensin-like domain found in bilateria defensins, sapecins, tenecins, phormicins, and ...
54-91 1.59e-18

defensin-like domain found in bilateria defensins, sapecins, tenecins, phormicins, and lucifensins; This subfamily includes a group of bactericidal proteins, such as defensins, sapecins, tenecins, phormicins, and lucifensins from bilateria. They are host defense peptides produced in response to injury and mostly active against Gram-positive bacteria. This model corresponds to the defensin-like (DEFL) domain, which adopts a typical structure characterized by cysteine-stabilized alpha/beta scaffold.


:

Pssm-ID: 409639  Cd Length: 38  Bit Score: 71.54  E-value: 1.59e-18
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 1476413340 54 TCDLLSGTGVKHSACAAHCLLRGNRGGYCNGRAICVCR 91
Cdd:cd21806    1 TCDLLSGFGVNHSACAAHCIARGKRGGYCNSKGVCVCR 38
 
Name Accession Description Interval E-value
DEFL_defensin-like cd21806
defensin-like domain found in bilateria defensins, sapecins, tenecins, phormicins, and ...
54-91 1.59e-18

defensin-like domain found in bilateria defensins, sapecins, tenecins, phormicins, and lucifensins; This subfamily includes a group of bactericidal proteins, such as defensins, sapecins, tenecins, phormicins, and lucifensins from bilateria. They are host defense peptides produced in response to injury and mostly active against Gram-positive bacteria. This model corresponds to the defensin-like (DEFL) domain, which adopts a typical structure characterized by cysteine-stabilized alpha/beta scaffold.


Pssm-ID: 409639  Cd Length: 38  Bit Score: 71.54  E-value: 1.59e-18
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 1476413340 54 TCDLLSGTGVKHSACAAHCLLRGNRGGYCNGRAICVCR 91
Cdd:cd21806    1 TCDLLSGFGVNHSACAAHCIARGKRGGYCNSKGVCVCR 38
Defensin_2 pfam01097
Arthropod defensin;
60-91 5.34e-10

Arthropod defensin;


Pssm-ID: 395873  Cd Length: 34  Bit Score: 49.80  E-value: 5.34e-10
                         10        20        30
                 ....*....|....*....|....*....|..
gi 1476413340 60 GTGVKHSACAAHCLLRGNRGGYCNGRAICVCR 91
Cdd:pfam01097  3 GCPVNHSACAAHCLSKGRRGGYCNGKGVCVCR 34
Knot1 smart00505
Knottins; Knottins, representing plant lectins/antimicrobial peptides, plant proteinase ...
54-92 3.00e-03

Knottins; Knottins, representing plant lectins/antimicrobial peptides, plant proteinase/amylase inhibitors, plant gamma-thionins and arthropod defensins.


Pssm-ID: 214700  Cd Length: 45  Bit Score: 32.83  E-value: 3.00e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1476413340  54 TCDLLSGT-----GVKHSACAAHCLLRGNRGGYCNGRAI-CVCRN 92
Cdd:smart00505  1 TCDGYSVTfsgncKSSCALCAKLCKKKGAKGGYCRGTTRrCFCYK 45
 
Name Accession Description Interval E-value
DEFL_defensin-like cd21806
defensin-like domain found in bilateria defensins, sapecins, tenecins, phormicins, and ...
54-91 1.59e-18

defensin-like domain found in bilateria defensins, sapecins, tenecins, phormicins, and lucifensins; This subfamily includes a group of bactericidal proteins, such as defensins, sapecins, tenecins, phormicins, and lucifensins from bilateria. They are host defense peptides produced in response to injury and mostly active against Gram-positive bacteria. This model corresponds to the defensin-like (DEFL) domain, which adopts a typical structure characterized by cysteine-stabilized alpha/beta scaffold.


Pssm-ID: 409639  Cd Length: 38  Bit Score: 71.54  E-value: 1.59e-18
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 1476413340 54 TCDLLSGTGVKHSACAAHCLLRGNRGGYCNGRAICVCR 91
Cdd:cd21806    1 TCDLLSGFGVNHSACAAHCIARGKRGGYCNSKGVCVCR 38
Defensin_2 pfam01097
Arthropod defensin;
60-91 5.34e-10

Arthropod defensin;


Pssm-ID: 395873  Cd Length: 34  Bit Score: 49.80  E-value: 5.34e-10
                         10        20        30
                 ....*....|....*....|....*....|..
gi 1476413340 60 GTGVKHSACAAHCLLRGNRGGYCNGRAICVCR 91
Cdd:pfam01097  3 GCPVNHSACAAHCLSKGRRGGYCNGKGVCVCR 34
DEFL cd21769
defensin-like domain family; This family includes a group of defensin-like proteins, including ...
65-91 1.37e-03

defensin-like domain family; This family includes a group of defensin-like proteins, including Arabidopsis thaliana protein LURE 1.2 (AtLURE1.2) and protein LURE 1.6 (AtLURE1.6), Mesobuthus martensii neurotoxin BmBKTx1, Arabidopsis thaliana defensin-like protein 32 (AtDEF32), as well as bactericidal proteins such as defensins, sapecins, tenecins, phormicins, and lucifensins. They are characterized by a defensin-like (DEFL) domain, which adopts a structure characterized by a cysteine-stabilized alpha/beta scaffold. AtLURE1.2 (also called cysteine-rich peptide 810_1.2 or defensin-like protein 213) and AtLURE1.6 (also called cysteine-rich peptide 810_1.6 or defensin-like protein 215) are pollen tube attractants guiding pollen tubes to the ovular micropyle. BmBKTx1, also called potassium channel toxin alpha-KTx 19.1 or BmK37, is a selective inhibitor of high conductance calcium-activated potassium channels KCa1.1/KCNMA1. Bactericidal proteins are host defense peptides produced in response to injury and are mostly active against Gram-positive bacteria.


Pssm-ID: 409636  Cd Length: 29  Bit Score: 33.33  E-value: 1.37e-03
                         10        20
                 ....*....|....*....|....*...
gi 1476413340 65 HSACAAHCLLRGNRGGYCNG-RAICVCR 91
Cdd:cd21769    2 CFDCARACMRRGKYGGTCSFeRKVCVCS 29
Knot1 smart00505
Knottins; Knottins, representing plant lectins/antimicrobial peptides, plant proteinase ...
54-92 3.00e-03

Knottins; Knottins, representing plant lectins/antimicrobial peptides, plant proteinase/amylase inhibitors, plant gamma-thionins and arthropod defensins.


Pssm-ID: 214700  Cd Length: 45  Bit Score: 32.83  E-value: 3.00e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1476413340  54 TCDLLSGT-----GVKHSACAAHCLLRGNRGGYCNGRAI-CVCRN 92
Cdd:smart00505  1 TCDGYSVTfsgncKSSCALCAKLCKKKGAKGGYCRGTTRrCFCYK 45
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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