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Conserved domains on  [gi|54036775|sp|P63659|]
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RecName: Full=ATP synthase subunit delta; AltName: Full=ATP synthase F(1) sector subunit delta; AltName: Full=F-type ATPase subunit delta; Short=F-ATPase subunit delta

Protein Classification

FoF1 ATP synthase subunit delta( domain architecture ID 10012586)

F0F1 ATP synthase subunit delta is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

Gene Ontology:  GO:0046933|GO:0015986|GO:0045261
PubMed:  30901262
SCOP:  3000714

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 1-175 6.98e-57

F0F1 ATP synthase subunit delta; Validated


:

Pssm-ID: 235593  Cd Length: 177  Bit Score: 176.52  E-value: 6.98e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775    1 MVKVANKYAKALFDVSLDTNNLETINEELTVINEAVKDkiEQLKMVDSNPTQTAEQRRELINGVFTDINPYIKNMMYVLA 80
Cdd:PRK05758   4 LSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAEN--EDLAALLSSPLVSAEQKKKLLAAVFKSLSEYVQNFLKVLA 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775   81 DNRHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEELDKIVKLVTQQTKLsKVIVDTKINPDLIGGFRVKVGTTVL 160
Cdd:PRK05758  82 ENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGR-KVKLNEKVDPSLIGGVIIKVGDRVI 160

                        170
                 ....*....|....*
gi 54036775  161 DGSVRNDLVQLQRKF 175
Cdd:PRK05758 161 DGSVRGKLERLKDAL 175
 
Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 1-175 6.98e-57

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 176.52  E-value: 6.98e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775    1 MVKVANKYAKALFDVSLDTNNLETINEELTVINEAVKDkiEQLKMVDSNPTQTAEQRRELINGVFTDINPYIKNMMYVLA 80
Cdd:PRK05758   4 LSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAEN--EDLAALLSSPLVSAEQKKKLLAAVFKSLSEYVQNFLKVLA 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775   81 DNRHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEELDKIVKLVTQQTKLsKVIVDTKINPDLIGGFRVKVGTTVL 160
Cdd:PRK05758  82 ENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGR-KVKLNEKVDPSLIGGVIIKVGDRVI 160

                        170
                 ....*....|....*
gi 54036775  161 DGSVRNDLVQLQRKF 175
Cdd:PRK05758 161 DGSVRGKLERLKDAL 175
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 4-173 2.33e-50

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 159.61  E-value: 2.33e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775     4 VANKYAKALFDVSLDTNNLETINEELTVINEAVKdKIEQLKMVDSNPTQTAEQRRELINGVFTD-INPYIKNMMYVLADN 82
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALA-ENPDLAAFLSNPTISAEEKKALLLELFKGlLSPLTLNFLKLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775    83 RHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEELDKIVKLVTQQTKLSKVIVDTKINPDLIGGFRVKVGTTVLDG 162
Cdd:pfam00213  80 GRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKKKVKLENKVDPSLIGGVVVRVGDKVIDG 159

                         170
                  ....*....|.
gi 54036775   163 SVRNDLVQLQR 173
Cdd:pfam00213 160 SVKGKLERLKR 170
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 4-175 2.56e-47

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 152.23  E-value: 2.56e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775   4 VANKYAKALFDVSLDTNNLETINEELTVINEAVKDKiEQLKMVDSNPTQTAEQRRELINGVFTD-INPYIKNMMYVLADN 82
Cdd:COG0712   6 IARRYAKALFELAKEKGALDEVEEELFALAALLAEN-PELRALLSSPVISAEEKKELLEALFGGkLSPETLNFLKLLVEN 84

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775  83 RHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEELDKIVKLVTQQTKlSKVIVDTKINPDLIGGFRVKVGTTVLDG 162
Cdd:COG0712  85 GRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKTG-KKVELNVKVDPSLIGGVVVRVGDKVIDG 163

                       170
                ....*....|...
gi 54036775 163 SVRNDLVQLQRKF 175
Cdd:COG0712 164 SVRGRLNRLRRAL 176
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 4-173 3.25e-29

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 105.86  E-value: 3.25e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775     4 VANKYAKALFDVSLDTNNLETINEELTVINEAVKDKiEQLKMVDSNPTQTAEQRRELINGVFTD-INPYIKNMMYVLADN 82
Cdd:TIGR01145   1 VARPYAKALFEIANEKSSLEEWGEMLNFVKEVLKNN-KELKKFLSNPLISAEKKKEFIKNVFGEqLDESSLNLLLLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775    83 RHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEELDKIVKLVTQQTKLSKVIVDTKINPDLIGGFRVKVGTTVLDG 162
Cdd:TIGR01145  80 GRLAALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAAKVKLNCKVDKDLIGGVIIRIGDRVIDG 159

                         170
                  ....*....|.
gi 54036775   163 SVRNDLVQLQR 173
Cdd:TIGR01145 160 SVRGQLKRLSR 170
 
Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 1-175 6.98e-57

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 176.52  E-value: 6.98e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775    1 MVKVANKYAKALFDVSLDTNNLETINEELTVINEAVKDkiEQLKMVDSNPTQTAEQRRELINGVFTDINPYIKNMMYVLA 80
Cdd:PRK05758   4 LSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAEN--EDLAALLSSPLVSAEQKKKLLAAVFKSLSEYVQNFLKVLA 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775   81 DNRHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEELDKIVKLVTQQTKLsKVIVDTKINPDLIGGFRVKVGTTVL 160
Cdd:PRK05758  82 ENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGR-KVKLNEKVDPSLIGGVIIKVGDRVI 160

                        170
                 ....*....|....*
gi 54036775  161 DGSVRNDLVQLQRKF 175
Cdd:PRK05758 161 DGSVRGKLERLKDAL 175
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 4-173 2.33e-50

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 159.61  E-value: 2.33e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775     4 VANKYAKALFDVSLDTNNLETINEELTVINEAVKdKIEQLKMVDSNPTQTAEQRRELINGVFTD-INPYIKNMMYVLADN 82
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALA-ENPDLAAFLSNPTISAEEKKALLLELFKGlLSPLTLNFLKLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775    83 RHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEELDKIVKLVTQQTKLSKVIVDTKINPDLIGGFRVKVGTTVLDG 162
Cdd:pfam00213  80 GRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKKKVKLENKVDPSLIGGVVVRVGDKVIDG 159

                         170
                  ....*....|.
gi 54036775   163 SVRNDLVQLQR 173
Cdd:pfam00213 160 SVKGKLERLKR 170
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 4-175 2.56e-47

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 152.23  E-value: 2.56e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775   4 VANKYAKALFDVSLDTNNLETINEELTVINEAVKDKiEQLKMVDSNPTQTAEQRRELINGVFTD-INPYIKNMMYVLADN 82
Cdd:COG0712   6 IARRYAKALFELAKEKGALDEVEEELFALAALLAEN-PELRALLSSPVISAEEKKELLEALFGGkLSPETLNFLKLLVEN 84

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775  83 RHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEELDKIVKLVTQQTKlSKVIVDTKINPDLIGGFRVKVGTTVLDG 162
Cdd:COG0712  85 GRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKTG-KKVELNVKVDPSLIGGVVVRVGDKVIDG 163

                       170
                ....*....|...
gi 54036775 163 SVRNDLVQLQRKF 175
Cdd:COG0712 164 SVRGRLNRLRRAL 176
PRK13429 PRK13429
F0F1 ATP synthase subunit delta; Provisional
 4-179 1.60e-35

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237386  Cd Length: 181  Bit Score: 122.24  E-value: 1.60e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775    4 VANKYAKALFDVSLDTNNLETINEELTVINEAVKDKIEqLKMVDSNPTQTAEQRRELINGVFTD--INPYIKNMMYVLAD 81
Cdd:PRK13429   6 IARRYAKALFQLAKEKGQLDSVYEELKQLAELLEDSPE-LRDALSNPVLSAEEKKAVLEKLLGKlkVSPEVLNFLKLLAD 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775   82 NRHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEELDKIVKLVTQQTKlSKVIVDTKINPDLIGGFRVKVGTTVLD 161
Cdd:PRK13429  85 RRRLGILPEIAARYLELADEQKGIVRATVTSAVPLSEAQQEAIRQKLEKMTG-KKVELDTAVDPSLIGGVVVKIGDKVLD 163

                        170
                 ....*....|....*...
gi 54036775  162 GSVRNDLVQLQRKFRRVN 179
Cdd:PRK13429 164 ASVRTQLRRLKETLKKGE 181
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 4-173 3.25e-29

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 105.86  E-value: 3.25e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775     4 VANKYAKALFDVSLDTNNLETINEELTVINEAVKDKiEQLKMVDSNPTQTAEQRRELINGVFTD-INPYIKNMMYVLADN 82
Cdd:TIGR01145   1 VARPYAKALFEIANEKSSLEEWGEMLNFVKEVLKNN-KELKKFLSNPLISAEKKKEFIKNVFGEqLDESSLNLLLLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775    83 RHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEELDKIVKLVTQQTKLSKVIVDTKINPDLIGGFRVKVGTTVLDG 162
Cdd:TIGR01145  80 GRLAALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAAKVKLNCKVDKDLIGGVIIRIGDRVIDG 159

                         170
                  ....*....|.
gi 54036775   163 SVRNDLVQLQR 173
Cdd:TIGR01145 160 SVRGQLKRLSR 170
PRK13436 PRK13436
F0F1 ATP synthase subunit delta; Provisional
 3-174 1.38e-20

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184053  Cd Length: 179  Bit Score: 83.56  E-value: 1.38e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775    3 KVANKYAKALFDVSLDTNNLETINEELTVINEAVKDKIEQLKMVDSNPTQTaEQRRELINGVFT-DINPYIKNMMYVLAD 81
Cdd:PRK13436   6 KNIYNYAEALFDIANEENNVEKYINEVFKIIEILKNNKDLIKLLTSYFIDK-EEKFKIIDKIFSaKIDIYLVNFLKILAK 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775   82 NRHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEELDKIVKLVTQQTKlSKVIVDTKINPDLIGGFRVKVGTTVLD 161
Cdd:PRK13436  85 NNLFIYIKQILKKFVKLSNEKLNITYGEIYTTEPLSEVQISRFESKLSKKLN-KKVHLVNKIDPKLIAGIKIKVDNKVFE 163

                        170
                 ....*....|...
gi 54036775  162 GSVRNDLVQLQRK 174
Cdd:PRK13436 164 NSIKSKLKELKKQ 176
atpD CHL00119
ATP synthase CF1 delta subunit; Validated
 1-171 1.13e-18

ATP synthase CF1 delta subunit; Validated


Pssm-ID: 177042  Cd Length: 184  Bit Score: 78.87  E-value: 1.13e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775    1 MVKVANKYAKALFDVSLDTNNLETINEELTVINEAVKDKIEqLKMVDSNPTQTAEQRRELINGVFTD-INPYIKNMMYVL 79
Cdd:CHL00119   5 VSKIAQPYAEALLEFAKEKNIMEQITADIQLILTFLNESPE-LKKFLANPLISKNAKKEVIKKTFGSqINENTLKFLMVL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775   80 ADNRHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEELDKIVKLVTQQTKLSKVIVDTKINPDLIGGFRVKVGTTV 159
Cdd:CHL00119  84 VDRGRIALLDAIIEKYLELVYKLASIKIAEVSTAVPLSSAQEEALIEKLKEMTNAKEIKLVITVDPSLIGGFLIKIGSKV 163

                        170
                 ....*....|..
gi 54036775  160 LDGSVRNDLVQL 171
Cdd:CHL00119 164 IDTSIKGQLKQL 175
PRK08474 PRK08474
F0F1 ATP synthase subunit delta; Validated
 4-136 1.80e-11

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 236271  Cd Length: 176  Bit Score: 59.61  E-value: 1.80e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775    4 VANKYAKALFDvSLDTNNLETINEELTVINEAVKDkiEQLKMVDSNPTQTAEQRRELINGVFTDINPYIKNMMYVLADNR 83
Cdd:PRK08474   5 IAKRYAKALLS-SLSSDELNDIYSNLKILSSAFAD--EKFKEIISSPEISKEQKIEFLLSFVDNANAKFQNFIKLLAENK 81

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 54036775   84 HISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEELDKIvklvtqQTKLSK 136
Cdd:PRK08474  82 RLELIPAIAKELERQIALKENEYVGVVYSNEKLSEETLKKL------EEKLSK 128
PRK13441 PRK13441
F0F1 ATP synthase subunit delta; Provisional
 4-173 3.95e-08

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184054  Cd Length: 180  Bit Score: 50.52  E-value: 3.95e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775    4 VANKYAKALFDVSLDTNNLETINEELTVineaVKDKIEQLKMVDSNPTQTAEQRRELINGVF----TDINPYIKNMMYVL 79
Cdd:PRK13441   6 IASKYARALLNVAIELEKEEEYGEFLDL----VCQIYESAKEFFDNPIVKPEKKVSLIKEIMkefgQEMDEFFENFLNLV 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775   80 ADNRHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEELDKIVKLVTQQTKLSKVIvDTKINPDLIGGFRVKVGTTV 159
Cdd:PRK13441  82 FENKRQKLLPQIRALFEYEKILSEQKVPVNLTTAHELSDEELKLLRKFVRKYVLRDPVF-EETIDESLIAGAVVEFEGKR 160

                        170
                 ....*....|....
gi 54036775  160 LDGSVRNDLVQLQR 173
Cdd:PRK13441 161 LDVTVQGRLKKIAR 174
PRK13434 PRK13434
F0F1 ATP synthase subunit delta; Provisional
 4-173 9.12e-06

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 139571  Cd Length: 184  Bit Score: 44.15  E-value: 9.12e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775    4 VANKYAKALFDvslDTNNLETINEELTVINEaVKDKIEQLKMVDSNPTQTAEQRRE-LINGVFTDINPYIKNMMYVLADN 82
Cdd:PRK13434   6 VSKVYASALLG---AANSPEEVEQELGDLVQ-LLFKDEKIRNFFLSPTVSPEEKEQtLAKNLRGKISDITLNFLGVLLNK 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775   83 RHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEELDKIVKLVTQQTKlSKVIVDTKINPDLIGGFRVKVGTTVLDG 162
Cdd:PRK13434  82 GRFIYLPEIQKDFTVELDKKKGRVRAQIVSYPSLEPAQVDKLGSILSEKFK-SEFILEVSEDKNLLGGFVVQFNDLKIEK 160

                        170
                 ....*....|.
gi 54036775  163 SVRNDLVQLQR 173
Cdd:PRK13434 161 SIASQLGEIKK 171
PRK13430 PRK13430
F0F1 ATP synthase subunit delta; Provisional
 18-175 1.91e-05

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237387 [Multi-domain]  Cd Length: 271  Bit Score: 43.40  E-value: 1.91e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775   18 DTNNLETINEELTVINEAVkDKIEQLKMVDSNPTQTAEQRRELINGVFTD-INPYIKNMM-YVLADNRHISLIADvFKAF 95
Cdd:PRK13430 113 AQGALDDVEDELFRLGRIL-ASNPELRLALSDRAAPAEAKRELLARLLYGkVTPVTERLAeQAVGRPRGRSIEEG-LDEL 190

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 54036775   96 QSLYNGHYNQDFATIESTYELSQEELDKIVklvtqqTKLSK-----VIVDTKINPDLIGGFRVKVGTTVLDGSVRNDLVQ 170
Cdd:PRK13430 191 SNLAAARRGRSVATVTTAVPLSDEQKQRLA------AALSRiygrpVHLNSEVDPSVLGGMRVQVGDEVIDGSVAGRLER 264


                 ....*
gi 54036775  171 LQRKF 175
Cdd:PRK13430 265 LRRRL 269
PRK13428 PRK13428
F0F1 ATP synthase subunit delta; Provisional
 108-169 1.94e-03

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184048 [Multi-domain]  Cd Length: 445  Bit Score: 37.79  E-value: 1.94e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 54036775  108 ATIESTYELSQEeldkivklvtQQTKLSKVI---------VDTKINPDLIGGFRVKVGTTVLDGSVRNDLV 169
Cdd:PRK13428 377 AQVSAAAELSDA----------QRTRLTEVLsriygrpvsVQLHIDPELLGGLSIAVGDEVIDGTLSSRLA 437
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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