NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|52783792|sp|P63220|]
View 

RecName: Full=Small ribosomal subunit protein eS21; AltName: Full=40S ribosomal protein S21

Protein Classification

eS21 family ribosomal protein( domain architecture ID 10472478)

eS21 family ribosomal protein is involved in the regulation of protein synthesis and cell growth

Gene Ontology:  GO:0003735|GO:0006364

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
Ribosomal_S21e pfam01249
Ribosomal protein S21e;
1-80 4.77e-55

Ribosomal protein S21e;


:

Pssm-ID: 460133  Cd Length: 79  Bit Score: 164.23  E-value: 4.77e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52783792    1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDkVTGRFNGQFKTYAICGAIRRMGESDDSILRLAKADGIVS 80
Cdd:pfam01249  1 MQNDAGELVDLYIPRKCSATNRLITAKDHASVQINVAEVD-ENGRMTGQFTTYALCGYIRRMGESDDALNRLAQKDGLLK 79
 
Name Accession Description Interval E-value
Ribosomal_S21e pfam01249
Ribosomal protein S21e;
1-80 4.77e-55

Ribosomal protein S21e;


Pssm-ID: 460133  Cd Length: 79  Bit Score: 164.23  E-value: 4.77e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52783792    1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDkVTGRFNGQFKTYAICGAIRRMGESDDSILRLAKADGIVS 80
Cdd:pfam01249  1 MQNDAGELVDLYIPRKCSATNRLITAKDHASVQINVAEVD-ENGRMTGQFTTYALCGYIRRMGESDDALNRLAQKDGLLK 79
 
Name Accession Description Interval E-value
Ribosomal_S21e pfam01249
Ribosomal protein S21e;
1-80 4.77e-55

Ribosomal protein S21e;


Pssm-ID: 460133  Cd Length: 79  Bit Score: 164.23  E-value: 4.77e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52783792    1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDkVTGRFNGQFKTYAICGAIRRMGESDDSILRLAKADGIVS 80
Cdd:pfam01249  1 MQNDAGELVDLYIPRKCSATNRLITAKDHASVQINVAEVD-ENGRMTGQFTTYALCGYIRRMGESDDALNRLAQKDGLLK 79
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH