|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
1-644 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 764.17 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 1 MYLLIVILPLIGSFAAGFFGRFLGSRGVAVVTTTCVSLSSIFSCIAFYEVALCASACYIKIAPWIFSELFDAAWGFLFDS 80
Cdd:MTH00210 1 MYILVLFLPLLSAIISGLFGRKIGTKGAGILTSSCIVISAIVSCCIFYETTLNGSATYIKLWRWFDSELLTTYFGLQFDS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 81 LTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWFTRIQA 160
Cdd:MTH00210 81 LTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 161 NKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAFSEPHHyflfcnmgfhaITVICILVFIGAVGKSAQIG 240
Cdd:MTH00210 161 NKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKES-----------LTIICLLLFIGAVGKSAQLG 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 241 LHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAATTGILQNDLKRVIAYSTCS 320
Cdd:MTH00210 230 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCS 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 321 QLGYMIFACGISNYSVSVFHLMNHACFKALLFLSAGSVIHAMSDEQDMRKMGGLASLLPFTYAMMLIGSLSLIGFPFLTG 400
Cdd:MTH00210 310 QLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTG 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 401 FYSKDVILELAYTKYTISgnFAFWLGSVSVFFTSYYSFRLLFLTFLAPTNSFKRDLSRCHDAPILMAIPLILLAFGSIFV 480
Cdd:MTH00210 390 FYSKDLILELTYDKYYIA--FAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGVHESSWNITFPLLLLAFGSIFV 467
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 481 GYLAKDMMIglgtnfwanSLFILPkneilaesefATPTIIKLIPILFSTLGSFVAYSVNFVVNPLIFALKTSTF---GNR 557
Cdd:MTH00210 468 GYLGKEVVL---------SNVIPP----------IVPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISRRGVSirlYHV 528
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 558 LYCFFNKRWFFDKVFNDFLARSFLRFGYEVSFKALDKGAIEILGPYGISYTIRKMAQQISKIQSGFVYHYAFVMLLGLTI 637
Cdd:MTH00210 529 IYTFLNSAWQFNYVINHFIVKNIWKFGHLITYRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYALIMIIFTTL 608
|
....*..
gi 464247 638 FISVIGL 644
Cdd:MTH00210 609 FISGAGI 615
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
1-639 |
0e+00 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 721.86 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 1 MYLLIVILPLIGSFAAGFFGRFLGSRGVAVVTTTCVSLSSIFSCIAFYEVALCASACYIKIAPWIFSELFDAAWGFLFDS 80
Cdd:MTH00020 1 MYLLVLFLPLLGALLSGLFGRKIGEKGAGILTSSCLIISLSWSFLIFYEILFNSSTTYIKLWRWLDSDLLTVYFGLQFDG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 81 LTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWFTRIQA 160
Cdd:MTH00020 81 LVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 161 NKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAFSephhyflfcnmgFHAITVICILVFIGAVGKSAQIG 240
Cdd:MTH00020 161 NKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVVSAP------------SSDITLICLFLFIGAVGKSAQLG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 241 LHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAATTGILQNDLKRVIAYSTCS 320
Cdd:MTH00020 229 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCS 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 321 QLGYMIFACGISNYSVSVFHLMNHACFKALLFLSAGSVIHAMSDEQDMRKMGGLASLLPFTYAMMLIGSLSLIGFPFLTG 400
Cdd:MTH00020 309 QLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTG 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 401 FYSKDVILELAYTKYTISgnFAFWLGSVSVFFTSYYSFRLLFLTFLAPTNSFKRDLSRCHDAPILMAIPLILLAFGSIFV 480
Cdd:MTH00020 389 FYSKDLILELAFGQYYLI--FAYWLGCFSALLTAFYSIRLIYLTFLSNTNLKKAVFFHLHEGDWNLLLPLGILALGSIFV 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 481 GYLAKDMMIGLGTNFWAnslfilpkneilaesefATPTIIKLIPILFSTLGSFVAYSVNFVVNPLIFALkTSTFGNRLYC 560
Cdd:MTH00020 467 GYLAKEMIWSFQITLPP-----------------IVPLSIKLLPVFLSLGGIGLVIILYFYSSKTFRVP-FSFIGRNSYT 528
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 464247 561 FFNKRWFFDKVFNDFLARSFLRFGYEVSFKALDKGAIEILGPYGISYTIRKMAQQISKIQSGFVYHYAFVMLLGLTIFI 639
Cdd:MTH00020 529 FLGSAWQFNYILNYFLIKKIWKGGHLISYRTIDKGVLELVGPKGISNFLIILTQGLSSLQSGLVFNYALVILIGVAIFI 607
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-642 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 691.90 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 1 MYLLIVILPLIGSFAAGFFGRFLGSRGVAVVTTTCVSLSSIFSCIAFYEVALCASACY-IKIAPWIFSELFDAAWGFLFD 79
Cdd:PRK06590 4 LLWLIVLLPLIGALILGLFGRRIGEKWAHLVGTGLVGLSALLSLVVFFDFLLGGGRAFsQTLWTWISVGDFDVDFGLRVD 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 80 SLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWFTRIQ 159
Cdd:PRK06590 84 GLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPS 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 160 ANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAFSEphhyflfcnMGFHAITVICILVFIGAVGKSAQI 239
Cdd:PRK06590 164 AGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVFAAAPQFFG---------LGWSALTLICLLLFIGAMGKSAQF 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 240 GLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAATTGILQNDLKRVIAYSTC 319
Cdd:PRK06590 235 PLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTM 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 320 SQLGYMIFACGISNYSVSVFHLMNHACFKALLFLSAGSVIHAMSDEQDMRKMGGLASLLPFTYAMMLIGSLSLIGFPFLT 399
Cdd:PRK06590 315 SQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFA 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 400 GFYSKDVILELAYTKYTIsgnFAFWLGSVSVFFTSYYSFRLLFLTFLAPTnsfKRDLSRCHDAPILMAIPLILLAFGSIF 479
Cdd:PRK06590 395 GFFSKDEILEAAFANGHI---NLFVAGLVGAFLTAFYSFRLIFLVFHGKE---KEKIHHPHESPAVMTLPLIVLAVLSVF 468
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 480 VGYlakdmmigLGTNFWANSLFILPKNEILAEsEFATPTIIKLIPILFSTLGSFVAYSVnFVVNPlIFALKTSTFGNRLY 559
Cdd:PRK06590 469 AGA--------LIVPPFLGVLPLTTELAHGEA-EHHLPVWVALLPLVVALAGIALAWLL-YLKKP-TLPTSIAAPGRFLY 537
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 560 CFFNKRWFFDKVFNDFLARSFLRFGYEVsFKALDKGAIEILGPyGISYTIRKMAQQISKIQSGFVYHYAFVMLLGLTIFI 639
Cdd:PRK06590 538 TLLRNKYYFDELYEKVFVKPGLALARLL-WKDGDDGIIDGLVP-NSARLVGGGSRVLRRLQTGYLRHYAASMLIGAVVLL 615
|
...
gi 464247 640 SVI 642
Cdd:PRK06590 616 ALL 618
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-641 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 611.00 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 1 MYLLIVILPLIGSFAAGFFGRFLGSRGVAVVTTTCVSLSSIFSCIAFYEVAlcASACYIKIAPWIFSELFDAAWGFLFDS 80
Cdd:COG1009 3 LLWLIPLLPLLGALLAGLLGRRLGRRAAGWLAALAPLAAFVLSLLLFPAVL--GGEVVVELYTWIPVGSLGLDFGFRLDG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 81 LTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWFTRIQA 160
Cdd:COG1009 81 LSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 161 NKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAFSEPHHYflfcnmgfhaiTVICILVFIGAVGKSAQIG 240
Cdd:COG1009 161 RRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILSSPLL-----------TLILLLLLLGAFGKSAQFP 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 241 LHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAATTGILQNDLKRVIAYSTCS 320
Cdd:COG1009 230 LHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVS 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 321 QLGYMIFACGISNYSVSVFHLMNHACFKALLFLSAGSVIHAMSdEQDMRKMGGLASLLPFTYAMMLIGSLSLIGFPFLTG 400
Cdd:COG1009 310 QLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG-TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAG 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 401 FYSKDVILELAYTkYTISGNFAFWLGSVSVFFTSYYSFRLLFLTFLAPTNSfkRDLSRCHDAPILMAIPLILLAFGSIFV 480
Cdd:COG1009 389 FFSKEAILEAALE-AGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRP--KTPKHPHESPWLMTLPLVVLAVLSLVL 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 481 GYLAKDMMIGlgtnfwanslFILPKNEILAESEFATPTIIKLIPILFSTLGSFVAYSVnFVVNPLIFALKTSTFgnrLYC 560
Cdd:COG1009 466 GLLLPGLLEG----------LLAPAAVLGGELHLAHGLLLNALPLLLSLLGIALGYLL-YLKRPLPALAERLKP---LYR 531
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 561 FFNKRWFFDKVFNDFLARSFLRFGYEVSFkalDKGAIEILgPYGISYTIRKMAQQISKIQSGFVYHYAFVMLLGLTIFIS 640
Cdd:COG1009 532 LLANKWYFDELYDALFVKPVRALARFLWF---DRYVIDGI-VNGLARLTLFSGRLLRRLQTGYLQFYALTILLGVVVLLL 607
|
.
gi 464247 641 V 641
Cdd:COG1009 608 L 608
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
1-634 |
0e+00 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 609.67 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 1 MYLLIVILPLIGSFAAGFFGRFLGSRGVAVVTTTCVSLSSIFSCIAFYEVAL--CASACYIKIAPWIFSELFDAAWGFLF 78
Cdd:TIGR01974 2 LIFLIVFLPLIGFLIAGLFGRRIGERVSGIIGIGSVGLSAALSAFVFVDFFLngEGEAFTQSLFPWISVGGFQVDFGLRL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 79 DSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWFTRI 158
Cdd:TIGR01974 82 DGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKP 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 159 QANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAFSephhyflfcnmgFHAITVICILVFIGAVGKSAQ 238
Cdd:TIGR01974 162 SANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPGAF------------FSALTLICLLLFIGAMGKSAQ 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 239 IGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAATTGILQNDLKRVIAYST 318
Cdd:TIGR01974 230 LPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYST 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 319 CSQLGYMIFACGISNYSVSVFHLMNHACFKALLFLSAGSVIHAMSDEQDMRKMGGLASLLPFTYAMMLIGSLSLIGFPFL 398
Cdd:TIGR01974 310 MSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGF 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 399 TGFYSKDVILELAYTKYTISgnFAFWLGSVSVFFTSYYSFRLLFLTFLAPTNSFKrdLSRCHDAPILMAIPLILLAFGSI 478
Cdd:TIGR01974 390 AGFFSKDLILEAAFASGTHS--FLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEA--DAHPHESPLVMLLPLIVLAVGSV 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 479 FVGYLAKDMMiglgtNFWANSLFILPKNEILAEsefATPTIIKLIPILFSTLGSFVAYSVnFVVNPLIFAlKTSTFGNRL 558
Cdd:TIGR01974 466 FAGFFIVPLF-----EFLKGVLPTSAEPALEHH---HVPALEIWSPTAVAILGILLAYLL-YLGNPTLPA-KIAQRHSGL 535
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 464247 559 YCFFNKRWFFDKVFNDFLARSFLRFGYEVSFKALDKGaIEILGPyGISYTIRKMAQQISKIQSGFVYHYAFVMLLG 634
Cdd:TIGR01974 536 YRLLLNKWYFDELYDKVFVKPYLFLGKLLWKDPDDKI-IDGFGP-GIARLVGAISKRLRKSQTGYLRWYAASMVVG 609
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
1-643 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 541.09 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 1 MYLLIVILPLIGSFAAGFFGRFLGSRGVAVVTTTCVSLSSIFSCIAFYEVALCASACYIKIAPWIFSELFDAAWGFLFDS 80
Cdd:MTH00032 1 MYLLVLLLPFINAFLLGFFGRLIGTIGSGILSTICMGSSTLIALFLAYEVLINDAVVHIELYKWIESEIFITHIGLLYDT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 81 LTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWFTRIQA 160
Cdd:MTH00032 81 LSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 161 NKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTI---FACASAFSEPHHYFLFCNMGFHAITVICILVFIGAVGKSA 237
Cdd:MTH00032 161 NKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggSVGSGIMDRGYYGGGAYESPLAPFAIIGILLLIGCIGKSA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 238 QIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAATTGILQNDLKRVIAYS 317
Cdd:MTH00032 241 QLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 318 TCSQLGYMIFACGIS-NYSVSVFHLMNHACFKALLFLSAGSVIHAMS-DEQDMRKMGGLASLLPFTYAMMLIGSLSLIGF 395
Cdd:MTH00032 321 TCSQLGYMVLIIGIEgSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 396 PFLTGFYSKDVILELAYT-------------------------KYTISGN---------FAFWLGSVSVFFTSYYSFRLL 441
Cdd:MTH00032 401 PYLTGFYSKDLILELTYSgrnmgipfgssllkiqgdigikkddRGSIGGPegypsrgsaFAFWLGTVAALLTAFYSIRLV 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 442 FLTFLAPTNSFKRDLSRCH----DAPILMAipLILLAFGSIFVGYLAKDMMIGlgtnfwanslfilpkneilAESEFATP 517
Cdd:MTH00032 481 YITFIISPNSPKESLISSHinivDKRVLTV--LSLLCFGAIFVGYLIQDILIG-------------------DIEHPIVP 539
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 518 TIIKLIPILFSTLGSFVA--YSVNFVVNPLIFALKT--STFGNRLYCFFNKRWFFDKVFNDFLARSFLRFGYEVSFKALD 593
Cdd:MTH00032 540 PLIKVMPTLMGLFGMGLClwAQKGTREGELYWGFDPigPSFLLSIYSFLGGAWQGDHLINKLVAIPLFSFGHWGIYKTLD 619
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|
gi 464247 594 KGAIEILGPYGISYTIRKMAQQISKIQSGFVYHYAFVMLLGLTIFISVIG 643
Cdd:MTH00032 620 RGWLELFGPQGISTIALRVSQFISNLQSGVISRYALVLLSFTIIFLALWG 669
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
4-644 |
3.19e-135 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 412.11 E-value: 3.19e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 4 LIVILPLIGSFAAGF----FGRFLGS--RGVAVVTTTCVSLSSIFSCIAFYEvALCASACYIKIAPWIFSELFDAAWGFL 77
Cdd:PRK07376 10 LIPVLPLLGAVLVGLglisFNQTTNRlrQPVAVLLISLVGAAAVLSYALLWS-QIQGHEPYERLFEWASAGDFHLPMGYV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 78 FDSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWFTR 157
Cdd:PRK07376 89 IDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 158 IQANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAFSEPHhyflfcNMGFHAITVICILVFIGAVGKSA 237
Cdd:PRK07376 169 KGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSG------AVSGWLALLLCILVFLGPMAKSA 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 238 QIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAATTGILQNDLKRVIAYS 317
Cdd:PRK07376 243 QFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 318 TCSQLGYMIFACGISNYSVSVFHLMNHACFKALLFLSAGSVIHAMSD--------EQDMRKMGGLASLLPFTYAMMLIGS 389
Cdd:PRK07376 323 TISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGC 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 390 LSLIGFPFLTGFYSKDVILELAYTKytisgNFAFWL-GSVSVFFTSYYSFRLLFLTF-----------------LAPTNS 451
Cdd:PRK07376 403 LAISGIPPFAGFWSKDEILGAAFEA-----NPALWFvGFLTAGMTAFYMFRMYFLTFegefrgndkelqkellaAADAPG 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 452 FKRDLSRC-----------HDAPILMAIPLILLAFGSIFVGYLAKDmmiglgtnfWANSL--FILPKNEILAESEFATPT 518
Cdd:PRK07376 478 HHEGHHEEhgehhhhsgspHESPWTMTLPLVVLAVPSVLIGLLGTP---------WNNRFeaFLHAPGEALEAAAHFEWG 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 519 ---IIKLIPILFSTLGSFVAYsvnfvvnpLIFALKT---STFGNR---LYCFFNKRWFFD----KVF---NDFLARSFLr 582
Cdd:PRK07376 549 eflILAGASVGIALIGITLAS--------LMYLLKKidpAAIAERfppLYQFSLNKWYLDdiyeKLFvkgSRRLARQVL- 619
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 464247 583 fgyEVSFKALD-----KGAIEILGPYGISYtirkmaqqiskIQSGFVYHYAfvmllgLTIFISVIGL 644
Cdd:PRK07376 620 ---EVDYKVVDgvvnlTGLVTLGSGEGLKY-----------FENGRAQFYA------LIVFGAVLGL 666
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
58-642 |
8.08e-130 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 396.65 E-value: 8.08e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 58 YIKIAPWIFSELFDAAWGFLFDSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLF 137
Cdd:MTH00208 85 NISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLF 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 138 LGWEGVGLASYLLINFWFTRIQANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAFSEPHHYFLFCnmg 217
Cdd:MTH00208 165 IGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILSLNNSNSFLINILLFG--- 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 218 fhaitvicilVFIGAVGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTS 297
Cdd:MTH00208 242 ----------ILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLILGSLTA 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 298 FFAATTGILQNDLKRVIAYSTCSQLGYMIFACGISNYSVSVFHLMNHACFKALLFLSAGSVIHAMSDEQDMRKMGGLASL 377
Cdd:MTH00208 312 LFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFL 391
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 378 LPFTYAMMLIGSLSLIGFPFLTGFYSKDVILELayTKYTISGNFAFWLGSVSVFFTSYYSFRLLFLTFLAPTNSfkRDLS 457
Cdd:MTH00208 392 LPVTSSCIILGSLALMGTPFLAGFYSKDLILEA--GLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSF--SPLS 467
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 458 RCHDAPILMAIPLILLAFGSIFVGYlakdmmiglgtnFWANSLFILPKneilaeseFATPTIIKLIPILFSTLGSFVAYS 537
Cdd:MTH00208 468 PISEENPNLTNPLLRLAIGTIISGW------------FFSNFVFNLPP--------LTLPLILKSLPLIVTIIGAAFSFS 527
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 538 vnfvvnpLIFALKTSTFGNRLYCFFNKRWFFDKVFNDFLARSFLRFGYEVSFKALDKGAIEILGPYGISYTIRKMAQQIS 617
Cdd:MTH00208 528 -------FLLSLSSNPINSNFFSFLSNQWFFVNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQ 600
|
570 580
....*....|....*....|....*.
gi 464247 618 KIQSGFVYHY-AFVMLLGLTIFISVI 642
Cdd:MTH00208 601 LTQTGYIKQYlLSSTLLFLLILTLSL 626
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
64-645 |
5.37e-127 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 388.54 E-value: 5.37e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 64 WIFSELFDAAWGFLFDSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGV 143
Cdd:MTH00211 63 WINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGV 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 144 GLASYLLINFWFTRIQANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFAcasaFSEPHHYFLFCnmgfhaitv 223
Cdd:MTH00211 143 GIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFI----LNLDLTLFLLG--------- 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 224 icilVFIGAVGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAATT 303
Cdd:MTH00211 210 ----LLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALC 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 304 GILQNDLKRVIAYSTCSQLGYMIFACGISNYSVSVFHLMNHACFKALLFLSAGSVIHAMSDEQDMRKMGGLASLLPFTYA 383
Cdd:MTH00211 286 ALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSS 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 384 MMLIGSLSLIGFPFLTGFYSKDVILELAYTKYTisGNFAFWLGSVSVFFTSYYSFRLLFLTFLAPTNSFKrdLSRCHDAP 463
Cdd:MTH00211 366 CLFLGSLALMGFPFLSGFFSKDLILESMNGSYL--NAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLS--LSPINENY 441
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 464 ILMAIPLILLAFGSIFVGYLAkdmmiglgtnfwanSLFILPKNEIlaesEFATPTIIKLIPILFSTLGSFVAYsvnFVVN 543
Cdd:MTH00211 442 KLLKNPLKRLALGSILAGFII--------------TSNLPPEKPE----ILSLPFLLKLMPLLVTIVGLLLGL---ELVN 500
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 544 PLIFALKTSTFGnrlycFFNKRWFFDKVFNDFLARSFLRFGYEVSFKALDKGAIEILGPYGISYTIRKMAQQISKIQSGF 623
Cdd:MTH00211 501 LTHKQLKTSTLS-----FSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGL 575
|
570 580
....*....|....*....|..
gi 464247 624 VYHYAFVMLLGLTIFISVIGLW 645
Cdd:MTH00211 576 IKSYLALLLLSLLLILLLFLLF 597
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
63-639 |
8.83e-121 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 372.57 E-value: 8.83e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 63 PWIFSELFDAAWGFLFDSLTVILL---LVVT--IVSslvhiYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLF 137
Cdd:MTH00004 67 PWIFTTTFNIPISFKLDQYSLMFLpiaLFVTwsILE-----FSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLF 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 138 LGWEGVGLASYLLINFWFTRIQANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFAcasafsePHHYFLFCNMG 217
Cdd:MTH00004 142 IGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFS-------PTQTPTLPLLG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 218 FhaitvicILvfiGAVGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTS 297
Cdd:MTH00004 215 L-------IL---AATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTT 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 298 FFAATTGILQNDLKRVIAYSTCSQLGYMIFACGISNYSVSVFHLMNHACFKALLFLSAGSVIHAMSDEQDMRKMGGLASL 377
Cdd:MTH00004 285 LFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKT 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 378 LPFTYAMMLIGSLSLIGFPFLTGFYSKDVILELAYTKYTISgnFAFWLGSVSVFFTSYYSFRLLFLTfLAPTNSFKRDLS 457
Cdd:MTH00004 365 LPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNA--WALLLTLLATSFTAAYSLRMILLV-QTGFPRTPPTTP 441
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 458 RCHDAPILMAiPLILLAFGSIFVGylakdMMIglgtnfwanSLFILPKNeilaESEFATPTIIKLIPILFSTLGSFVAys 537
Cdd:MTH00004 442 INENTPTIIN-PITRLALGSILAG-----LLI---------SSTILPTK----TPPMTMPTTTKLAALIVTILGILLA-- 500
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 538 vnfvvnpLIFALKTSTF----GNRLYCFFNKRWFFDKVFNDFLARSFLRFGYEVSFKALDKGAIEILGPYGISYTIRKMA 613
Cdd:MTH00004 501 -------LELSNMTTTLtppkQNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQKIATHLIDLSWLEKMGPKGLANLQLTAS 573
|
570 580
....*....|....*....|....*.
gi 464247 614 QQISKIQSGFVYHYAFVMLLGLTIFI 639
Cdd:MTH00004 574 KTLTTLQKGLIKNYLTSFALTILLLL 599
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
4-445 |
5.23e-112 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 353.81 E-value: 5.23e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 4 LIVILPLIGSFAAG----FFGRFLGS--RGVAVVTTTCVSLSSIFSCIAFYEvALCASACYIKIAPWIFSELFDAAWGFL 77
Cdd:CHL00025 10 IIPFLPLPVPMLIGlgllLFPTATKNlrRMWAFPSILLLSIVMIFSLNLSIQ-QINGSSIYQYLWSWTINNDFSLEFGYL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 78 FDSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWFTR 157
Cdd:CHL00025 89 IDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 158 IQANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFacaSAFSEphhyfLFCNMGFHAI--TVICILVFIGAVGK 235
Cdd:CHL00025 169 PIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLF---EIFNN-----LIYNNEVNLLfaTLCAFLLFLGPVAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 236 SAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAATTGILQNDLKRVIA 315
Cdd:CHL00025 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 316 YSTCSQLGYMIFACGISNYSVSVFHLMNHACFKALLFLSAGSVIHAM--------SDEQDMRKMGGLASLLPFTYAMMLI 387
Cdd:CHL00025 321 YSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 464247 388 GSLSLIGFPFLTGFYSKDVILELAYTKYTISGnfafWLGSVSVFFTSYYSFRLLFLTF 445
Cdd:CHL00025 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFA----IIAWSTAGLTAFYMFRIYLLTF 454
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
63-642 |
1.71e-110 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 345.74 E-value: 1.71e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 63 PWIFSELFDAAWGFLFDSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEG 142
Cdd:MTH00066 65 HWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEG 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 143 VGLASYLLINFWFTRIQANKAAIKAMLINRVGDFGLALGIMGcftifqtvdfstiFACASAFSEPHHYFLFCNMgfhaiT 222
Cdd:MTH00066 145 VGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAW-------------LAMNTNSWELQQIFLLNDN-----S 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 223 VICILVFI-GAVGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAA 301
Cdd:MTH00066 207 TLPLLGLIlAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 302 TTGILQNDLKRVIAYSTCSQLGYMIFACGISNYSVSVFHLMNHACFKALLFLSAGSVIHAMSDEQDMRKMGGLASLLPFT 381
Cdd:MTH00066 287 ACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPIT 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 382 YAMMLIGSLSLIGFPFLTGFYSKDVILELAYTKYTISgnFAFWLGSVSVFFTSYYSFRLLFLTFLaptnSFKR--DLSRC 459
Cdd:MTH00066 367 TSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNS--WALILTLIATSFTAVYSFRIIYFSSM----KFPRslPLSPI 440
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 460 HDAPILMAIPLILLAFGSIFVGYLakdmmiglgtnfwANSLFILPKNEILaesefATPTIIKLIPILFSTLGSFVAYSVN 539
Cdd:MTH00066 441 NENNPLIINPIKRLAWGSIIAGLL-------------IIFNILPMKPQIL-----TMPTFMKLAALLVTLLGLLIALDLA 502
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 540 FVVNplifalkTSTFGNRLYCFFNKRWFFDKVFNDFLARSFLRFGYEVSFKALDKGAIEILGPYGISYTIRKMAQQISKI 619
Cdd:MTH00066 503 KITS-------KTTPKTKMHSFSNLLAFFPTIIHRLSPKTNLNSGQNIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNI 575
|
570 580
....*....|....*....|...
gi 464247 620 QSGFVYHYAFVMLLGLTIFISVI 642
Cdd:MTH00066 576 QTGLIKTYLTLFLITLLLMLILL 598
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
99-639 |
2.25e-106 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 334.90 E-value: 2.25e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 99 YSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWFTRIQANKAAIKAMLINRVGDFGL 178
Cdd:MTH00108 103 FSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGF 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 179 ALGiMGCFTI-FQTVDFSTIFACasafsephhyflfcNMGFHAITVICILvfIGAVGKSAQIGLHTWLPDAMEGPTPVSA 257
Cdd:MTH00108 183 ILA-MAWFLLnLNSWDLQQIFML--------------NPNNSNLPLMGLL--LAATGKSAQFGLHPWLPSAMEGPTPVSA 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 258 LIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAATTGILQNDLKRVIAYSTCSQLGYMIFACGISNYSVS 337
Cdd:MTH00108 246 LLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLA 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 338 VFHLMNHACFKALLFLSAGSVIHAMSDEQDMRKMGGLASLLPFTYAMMLIGSLSLIGFPFLTGFYSKDVILELAYTKYTI 417
Cdd:MTH00108 326 FLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTN 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 418 SgnFAFWLGSVSVFFTSYYSFRLLFLTFLA----PTnsfkrdLSRCHDAPILMAIPLILLAFGSIFVGYLAkdmmiglgt 493
Cdd:MTH00108 406 A--WALLITLIATSLTAAYSTRIIFFALLGqprfPP------LITINENNPLLINPIKRLLLGSIFAGFLI--------- 468
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 494 nfwanSLFILPKNEIlaesEFATPTIIKLIPILFSTLGSFVAYSVNFVVNPLIFALKTSTFGnrlycFFNKRWFFDKVFN 573
Cdd:MTH00108 469 -----SNNIPPTTIP----QMTMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFK-----FSNMLGYFPTIMH 534
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 464247 574 DFLARSFLRFGYEVSFKALDKGAIEILGPYGISYTIRKMAQQISKiQSGFV--YHYAFVMLLGLTIFI 639
Cdd:MTH00108 535 RLPPYMNLTMSQKLASMLLDLIWLEKILPKTISLIQMKASTTISN-QKGLIklYFLSFLITLTLSLLL 601
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
64-639 |
1.63e-105 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 332.95 E-value: 1.63e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 64 WIFSELFDAAWGFLFDSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGV 143
Cdd:MTH00137 72 WMNTLTFDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGV 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 144 GLASYLLINFWFTRIQANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAFsephhyflfcNMGFHAITV 223
Cdd:MTH00137 152 GIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMAWMATNLNSWEIQQIFALSKDF----------DLTLPLLGL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 224 IcilvfIGAVGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAATT 303
Cdd:MTH00137 222 I-----LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATC 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 304 GILQNDLKRVIAYSTCSQLGYMIFACGISNYSVSVFHLMNHACFKALLFLSAGSVIHAMSDEQDMRKMGGLASLLPFTYA 383
Cdd:MTH00137 297 ALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSS 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 384 MMLIGSLSLIGFPFLTGFYSKDVILELAYTKYtiSGNFAFWLGSVSVFFTSYYSFRLLFL--------TFLAPTNsfkrd 455
Cdd:MTH00137 377 CLTIGSLALTGTPFLAGFFSKDAIIEALNTSH--LNAWALTLTLIATSFTAVYSLRVVFFvsmghprfNPLSPIN----- 449
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 456 lsrcHDAPILMAiPLILLAFGSIFVGYLakdmmigLGTNfwanslfILP-KNEILaesefATPTIIKLIPILFSTLGSFV 534
Cdd:MTH00137 450 ----ENNPAVIN-PIKRLAWGSIIAGLL-------ITSN-------ILPlKTPVM-----TMPPLLKLAALIVTILGLLI 505
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 535 AY------SVNFVVNPLifaLKTSTFGNRLycffnkrWFFDKVFNDFLARSFLRFGYEVSFKALDKGAIEILGPYGISYT 608
Cdd:MTH00137 506 ALelasltNKQFKPTPT---LPPHHFSNML-------GFFPAIIHRLTPKLNLTLGQTIATQMVDQTWLEKTGPKGIASL 575
|
570 580 590
....*....|....*....|....*....|.
gi 464247 609 IRKMAQQISKIQSGFVYHYAFVMLLGLTIFI 639
Cdd:MTH00137 576 QLPLITTTSNIQQGMIKTYLTLFLLTLALAT 606
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
76-639 |
1.68e-89 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 289.73 E-value: 1.68e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 76 FLFDSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLInFWF 155
Cdd:MTH00165 50 FLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYY 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 156 TRIQANKAAIKAMLINRVGDFGLALGI-----MGCFTIFqtvdfstifacasafsephhYFLFCNMGFHAITVICILVFI 230
Cdd:MTH00165 129 QNKKSYNAGMLTALSNRIGDVAILLSIawmmnFGSWNFI--------------------FYLDFMKNSFEMLLIGLLIML 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 231 GAVGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNaLIVITFVGAMTSFFAATTGILQNDL 310
Cdd:MTH00165 189 AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFF-SKFLLLISLLTMFMAGLGANFEFDL 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 311 KRVIAYSTCSQLGYMIFACGISNYSVSVFHLMNHACFKALLFLSAGSVIHAMSDEQDMRKMGGLASLLPFTYAMMLIGSL 390
Cdd:MTH00165 268 KKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNL 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 391 SLIGFPFLTGFYSKDVILELAYTKYTISgnFAFWLGSVSVFFTSYYSFRLLFLTFLAPTNSFKrdLSRCHDAPILMAIPL 470
Cdd:MTH00165 348 SLCGFPFLSGFYSKDLILEMVSMSNLNF--FIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKS--LNNLSDESKFMLKSM 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 471 ILLAFGSIFVGYLAkdmmiglgtnfwanSLFILPKNEIlaeseFATPTIIKLIPILFSTLGSFVAYSVNFV-VNPLIFAL 549
Cdd:MTH00165 424 ILLLFMSIFGGSML--------------SWLIFPEPYM-----ICLPFYLKLLTLFVILLGGWLGYELSLMsLSYNLKSL 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 550 KTSTFGNrlycFFNKRWFFDKVFNDFLARSFLRFGYeVSFKALDKGAIEILGPYGISYTIRKMAQQISKIQSGFVYHYAF 629
Cdd:MTH00165 485 KNYKLSS----FLGSMWFMPFLSTYGISYYPLNLGS-LSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLL 559
|
570
....*....|
gi 464247 630 VMLLGLTIFI 639
Cdd:MTH00165 560 SFLLWMIILL 569
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
76-642 |
4.32e-89 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 288.66 E-value: 4.32e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 76 FLFDSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWf 155
Cdd:MTH00151 50 LVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYY- 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 156 triQANK---AAIKAMLINRVGDFGLALGImgcftifqtvdFSTIFACasafsephHYFLFCNMGFHAITVICILVFIGA 232
Cdd:MTH00151 129 ---QNKKslsAGMLTALTNRIGDVLILLSI-----------ALLVLLG--------HWSILSMWDFKLSGWLGLLLVLAA 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 233 VGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAATTGILQNDLKR 312
Cdd:MTH00151 187 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKK 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 313 VIAYSTCSQLGYMIFACGISNYSVSVFHLMNHACFKALLFLSAGSVIHAMSDEQDMRKMGGLASLLPFTYAMMLIGSLSL 392
Cdd:MTH00151 267 IIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSL 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 393 IGFPFLTGFYSKDVILELAYTKYTisGNFAFWLGSVSVFFTSYYSFRLLF-LTFLAPTNSFkrdLSRCHDAPILMAIPLI 471
Cdd:MTH00151 347 CGAPFLSGFYSKDLILESSLMSPT--SLLMVLLMFVGVGLTALYSARLSFcLVWGSMKSSS---LSSKSDEDFYVSLPML 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 472 LLAFGSIFVGYLAKDMMIGLGTNFWanslfilpkneilaesefatptiiklIPILFSTLGSFVAYSVNFVVNPLIFALKT 551
Cdd:MTH00151 422 LLSLGALIGGKLLQSLFEGFSEEFF--------------------------LPSYLKLLIGFVILLGLFLSFGFWDSGFS 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 552 STFGNRLYCFFNKRWFFDKVFNDFLARSFLRFGyEVSFKALDKGAIEILGPYGISYTIRKMAQQISKIQSGFVYHYAFVM 631
Cdd:MTH00151 476 SSKMVKLSFFFSSMWFLSPLSSQPLKSLSLKLS-NSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLI 554
|
570
....*....|.
gi 464247 632 LLGLTIFISVI 642
Cdd:MTH00151 555 LLLVLFLVVIS 565
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
77-639 |
1.92e-75 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 252.64 E-value: 1.92e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 77 LFDSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWft 156
Cdd:MTH00209 49 IIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYY-- 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 157 riQANKAAIKAM---LINRVGDFGLalgimgcftifqtvdfstIFACASAFSEPHHYFLFCNMGFHAITVICILVFIGAV 233
Cdd:MTH00209 127 --QNSKSLSAGMltaLTNRVGDALL------------------ILSIAWMLMHGNWNIFYLNFNSNLGSVISVLIVLAAM 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 234 GKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAATTGILQNDLKRV 313
Cdd:MTH00209 187 TKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKI 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 314 IAYSTCSQLGYMIFACGISNYSVSVFHLMNHACFKALLFLSAGSVIHAMSDEQDMRKMGGLASLLPFTYAMMLIGSLSLI 393
Cdd:MTH00209 267 IALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLC 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 394 GFPFLTGFYSKDVILELA-YTKYTISGNFAFWLgsvSVFFTSYYSFRLLFLTFLAPTNSFkrDLSRCHDAPILMAIPLIL 472
Cdd:MTH00209 347 GIPFLAGFYSKDLILESMlESNMPIMTLILMFL---STSLTAAYSMRLSYFSLWGPNSSK--SLNSSFDQNKLNLKPMLV 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 473 LAFGSIFVGYLAKDMMiglgtNFWANSLFIlpkneilaesefatPTIIKLIPILFSTLGSFVAYsvnFVVNPLIFALKts 552
Cdd:MTH00209 422 LTLGSITGGSVMSWVM-----VPSVNSVVL--------------PWFLKLLPIMLILFGVLLMY---MVLKKNFFLIK-- 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 553 tfGNRLYCFFNKRWFFDKVFNDFLARSFLRFGyEVSFKALDKGAIEILGPYGISYTIRKMAQQISKIQSGFVYHYAFVML 632
Cdd:MTH00209 478 --GYKVNYFLSQMWFLPDLSSQPVNKFTMKLS-KTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMM 554
|
....*..
gi 464247 633 LGLTIFI 639
Cdd:MTH00209 555 LILLGVI 561
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
57-641 |
1.52e-71 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 242.36 E-value: 1.52e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 57 CYIKIAPWIFSELFDAAwGFLFDSltvilllVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQL 136
Cdd:MTH00207 42 FTISSSPINFTIILDPT-GTLFSS-------TVLFISANVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMIL 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 137 FLGWEGVGLASYLLInFWFTRIQANKAAIKAMLINRVGDFGLALGImgcftifqtvdfstifacasAFSEPHHYFLFCNM 216
Cdd:MTH00207 114 LLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSI--------------------GWTLNQGHWSITNM 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 217 GFHAITVICIL-VFIGAVGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAM 295
Cdd:MTH00207 173 WQTDMNNYIALsIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASL 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 296 TSFFAATTGILQNDLKRVIAYSTCSQLGYMIFACGISNYSVSVFHLMNHACFKALLFLSAGSVIHAMSDEQDMRKMGGLA 375
Cdd:MTH00207 253 TMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLT 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 376 SLLPFTYAMMLIGSLSLIGFPFLTGFYSKDVILELAY---TKYTISGNFAFwlgsvSVFFTSYYSFRLLFLTFLAPTNSf 452
Cdd:MTH00207 333 NQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLfypHNSLMILMIFL-----ATALTAAYSTRFTLAVLWSPNSS- 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 453 kRDLSRCHDAPILMAIPLILLAFGSIFVGYLAKDMMiglgtnfwanslfilpkneILAESEFATPTIIKLIPILFSTLGS 532
Cdd:MTH00207 407 -SPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWL-------------------PTPQEEPILPLQYKLLPLLVVTLGA 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 533 FVAYSV---NFVVNPLIFALKTSTFGNRLYcffnkrWFFDKVFNDFLARSFLRFGYEVsFKALDKGAIEILGPYGISYTI 609
Cdd:MTH00207 467 LLAWLFttpNITKTPLLINNPLSHFASCLM------WFLVPLSSQFIMSTPMNLSHNY-LKLLDQGWLEMLGAQGTFKMF 539
|
570 580 590
....*....|....*....|....*....|..
gi 464247 610 RKMAQQISKIQSGFVYHYAFVMLLGLTIFISV 641
Cdd:MTH00207 540 SRSSNNVMKLQKNIPNNYLMMSFVLLTIIIIM 571
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
79-474 |
1.17e-67 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 236.75 E-value: 1.17e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 79 DSLTVILLLVVTIVSSLVHIYSISYMSEDPHS-PRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWFTR 157
Cdd:PRK12645 77 DGLSLLFALLITGIGSLVVLYSIYYLSKKKEQlGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYER 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 158 IQANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAFSEpHHYFLFCnmgfhaitviCILVFIGAVGKSA 237
Cdd:PRK12645 157 EASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANADEIQN-SPLFIPA----------MILILLGAFTKSA 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 238 QIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAATTGILQNDLKRVIAYS 317
Cdd:PRK12645 226 QFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 318 TCSQLGYMIFACGISNYSV----------------SVFHLMNHACFKALLFLSAGSVIHAmSDEQDMRKMGGLASLLPFT 381
Cdd:PRK12645 306 TVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPIT 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 382 YAMMLIGSLSLIGFPFLTGFYSKDVILElAYTKYTISGNFAF-----------WLGSVsvfFTSYYSFRLLFLTFLAPTN 450
Cdd:PRK12645 385 FTIALIGALSMAGLPPFNGFLSKEMFFE-SMLNATEANLFSLdtwgvlfpviaWVASV---FTFVYSIIFIFKTFFGKYK 460
|
410 420
....*....|....*....|....
gi 464247 451 SFKRDlSRCHDAPILMAIPLILLA 474
Cdd:PRK12645 461 PEQLP-KKAHEAPIGMLISPIILA 483
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
79-481 |
7.61e-67 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 234.36 E-value: 7.61e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 79 DSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWFTRI 158
Cdd:TIGR00940 74 DGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRA 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 159 QANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAFSEpHHYFLFcnmgfhaitvICILVFIGAVGKSAQ 238
Cdd:TIGR00940 154 HSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAIRN-SPLFGT----------AMVLVLLGAFTKSAQ 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 239 IGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAATTGILQNDLKRVIAYST 318
Cdd:TIGR00940 223 FPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFST 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 319 CSQLGYMIFACGISNYSV----------------SVFHLMNHACFKALLFLSAGSVIHAmSDEQDMRKMGGLASLLPFTY 382
Cdd:TIGR00940 303 ISQLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITF 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 383 AMMLIGSLSLIGFPFLTGFYSKDVILELAYTKYTIS-------GNFAFWLGSVSVFFTSYYSFRLLFLTFLAPTNsfKRD 455
Cdd:TIGR00940 382 TLAMIASAAMAGVPPFNGFLSKEMFFAEAITAHLVNpfdtvtlGYLFPYVATVASVFTFVYSLRFIHGVFFGRPK--PED 459
|
410 420
....*....|....*....|....*..
gi 464247 456 LSR-CHDAPILMAIPLILLAFGSIFVG 481
Cdd:TIGR00940 460 LPRkPHEPPRWMLASPDILVLLVLVFG 486
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-481 |
8.37e-67 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 236.24 E-value: 8.37e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 1 MYLLIVILPLIGSFAAGFFGRFlgSRGVAVVTTTCVSLSSIFSCIAFYEvALCASACYIKIAPWIfselfdAAWGFLF-- 78
Cdd:PRK12648 2 SLLLLVLLPFLGALLAALLPRN--ARNAEAWLAGLVALAALVLLALLYP-AVAAGEVIRAEIEWL------PALGLNLsl 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 79 --DSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWFT 156
Cdd:PRK12648 73 rlDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHH 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 157 RIQANKAAIKAMLINRVGdfGLALgIMGCFTIFQTV---DFSTIFACASAFSEpHHYFLfcnmgfhaitVICILVFIGAV 233
Cdd:PRK12648 153 RADARRGARMALTVTGAG--GLAL-LAGVLLLGHIVgsyDLDVVLAAGDLIRA-HPLYP----------PALVLILLGAF 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 234 GKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAATTGILQNDLKRV 313
Cdd:PRK12648 219 TKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGL 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 314 IAYSTCSQLGYMIFACGI-SNYSV--SVFHLMNHACFKALLFLSAGSVIHAmSDEQDMRKMGGLASLLPFTYAMMLIGSL 390
Cdd:PRK12648 299 LAYSTISHLGLITLLLGLgSPLAAvaAIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAAA 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 391 SLIGFPFLTGFYSKDVILELAYTKYTISGnFAFWLGSVSVF---FTSYYSFRLLFLTFLAPTnsfKRDLSRC-HDAPILM 466
Cdd:PRK12648 378 AMAGVPLLNGFLSKEMFFAETLDTHLLGS-LDWLLPVAATLagaFSVAYSLRFIHDVFFGPP---PDDLPKTpHEPPRWM 453
|
490
....*....|....*
gi 464247 467 AIPLILLAFGSIFVG 481
Cdd:PRK12648 454 RAPVELLVLLCLLVG 468
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
63-481 |
5.70e-64 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 225.95 E-value: 5.70e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 63 PWIFSelFDAAWGFLFDSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEG 142
Cdd:PRK12647 49 AWVPS--LGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWEL 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 143 VGLASYLLINFWFTRIQANKAAIKAMLINRVGdfGLAL--GIMGCFTIFQTVDFSTIFACASAFSEPHHYFLfcnmgfha 220
Cdd:PRK12647 127 TSITSFLLIGFNHEREAARRAALQALLVTGGG--GLALlaGLILLGNVTGTYSLSELLASGDVIREHPLYLA-------- 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 221 itvICILVFIGAVGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFA 300
Cdd:PRK12647 197 ---ILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTG 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 301 ATTGILQNDLKRVIAYSTCSQLGYMIFACGI-SNYSVSVF--HLMNHACFKALLFLSAGSVIHAmSDEQDMRKMGGLASL 377
Cdd:PRK12647 274 ALLAVRQTDLKLILAYSTVSALGTLVMLLGLgSELAIKAAvlFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRA 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 378 LPFTYAMMLIGSLSLIGFPFLTGFYSKDVILELAYTKYTISGNFAfwlgsVSVFFTSYYSFRLLFLTFLAP-TNSFKRDL 456
Cdd:PRK12647 353 MPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILT-----VAAVLGNALMVAVAFLVGIKPfLGKLVETP 427
|
410 420
....*....|....*....|....*
gi 464247 457 SRCHDAPILMAIPLILLAFGSIFVG 481
Cdd:PRK12647 428 KHPHEAPVLMWLGPAVLAVLGLLFG 452
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
63-473 |
8.83e-59 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 211.92 E-value: 8.83e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 63 PWIfsELFDAAWGFLFDSLTVILLLVVTIVSSLVHIYSISYMS-EDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWE 141
Cdd:PRK12646 63 PWM--KTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSsRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 142 GVGLASYLLINFWFTRIQANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAFSEpHHYFLFcnmgfhai 221
Cdd:PRK12646 141 LTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKN-HGLFIP-------- 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 222 tvICILVFIGAVGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAA 301
Cdd:PRK12646 212 --MIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGS 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 302 TTGILQNDLKRVIAYSTCSQLGYMIFACGISN-------------YSVS----VFHLMNHACFKALLFLSAGSVIHAmSD 364
Cdd:PRK12646 290 ITALKQWDLKGILAYSTISQLGMIMAMVGIGGgyaqhqqdaiasiYVFVlfaaLFHLMNHAIFKCALFMGVGIIDHE-AG 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 365 EQDMRKMGGLASLLPFTYAMMLIGSLSLIGFPFLTGFYSKDVILE-LAYTKYTISGNFAF-----WLGSVSVFFTSYYSF 438
Cdd:PRK12646 369 TRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDaLTQTGQLSQFSLISmiiivFIGVIASIFTFTYAL 448
|
410 420 430
....*....|....*....|....*....|....*
gi 464247 439 RLLFLTFLAPTNSFKRDLSRCHDaPILMAIPLILL 473
Cdd:PRK12646 449 YMVKEVFWGKYDSKVFTKKNIHE-PWLFSLPSLIL 482
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
79-481 |
1.14e-58 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 211.61 E-value: 1.14e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 79 DSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWFTRI 158
Cdd:PRK12649 79 DGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRP 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 159 QANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAFSEPHHYFLFcnmgfhaiTVICILVFIGAVGKSAQ 238
Cdd:PRK12649 159 ESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLF--------LITLILIFIGAAAKSAQ 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 239 IGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAATTGILQNDLKRVIAYST 318
Cdd:PRK12649 231 GPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYST 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 319 CSQLGYMIFACGISNY-------SVSVFHLMNHACFKALLFLSAGSVIHAMSdEQDMRKMGGLASLLPFTYAMMLIGSLS 391
Cdd:PRK12649 311 ISQLAYLMTMYGYTTYhepglgvAAATFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAALA 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 392 LIGFPFLTGFYSKDVILELAY-TKYTISGNFAFWLGSVSVF---FTSYYSFRLLFLTFLAPTNSfKRDLSRCHDAPILMA 467
Cdd:PRK12649 390 MAGIPPLNGFLSKEMFYETSVeMGALIGGPFTIIIPAVAVLggvFTFAYSIKLIDGIFLGERTH-DHLPHHIHEAPYVML 468
|
410
....*....|....
gi 464247 468 IPLILLAFGSIFVG 481
Cdd:PRK12649 469 IPAAFLAGLVILFG 482
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
131-412 |
2.34e-58 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 198.69 E-value: 2.34e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 131 DNFIQLFLGWEGVGLASYLLINFWFTRIQANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFAcasafsephhy 210
Cdd:pfam00361 2 NDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSK----------- 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 211 FLFCNMGFHAITVICILVFIGAVGKSAQIGLHTWLPDA-MEGPTPVSALIhAATMVTAGVFMIARCSPLFE-YSPNALIV 288
Cdd:pfam00361 71 ALTGGLNSSGLLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLpSSPFIQQI 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 289 ITFVGAMTSFFAATTGILQNDLKRVIAYSTCSQLGYMIFACGIS---NYSVSVFHLMNHACFKALLFLSAGSVIHAMSDE 365
Cdd:pfam00361 150 LLILAIISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHT 229
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 464247 366 QDMRKMGGLASLLPFTYAMMLIGSLSLIGFPFLTGFYSKDVILELAY 412
Cdd:pfam00361 230 RNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAV 276
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
63-485 |
1.20e-57 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 210.55 E-value: 1.20e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 63 PWIFSelFDAAWGFLFDSLTVILLLVVTIVSSLVHIYSISYMSED-PHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWE 141
Cdd:PRK12644 59 PWIPS--LGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDePRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWE 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 142 GVGLASYLLINFWFTRIQANKAAIKAMLINRVGdfGLAL--GIMGCFTIFQTVDFSTIFACASAFsephhyflfcnmgfH 219
Cdd:PRK12644 137 LTTVLSFLLIGHYAERAASRRAALQALLVTTAG--GLAMlvGIIILGQAAGTYRLSELLADPPTG--------------P 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 220 AITVICILVFIGAVGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFF 299
Cdd:PRK12644 201 AVSVAVVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLL 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 300 AATTGILQNDLKRVIAYSTCSQLGYMIFACGISNYSVS---VFHLMNHACFKALLFLSAGSVIHAmSDEQDMRKMGGLAS 376
Cdd:PRK12644 281 GGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAAlagLAMLLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGR 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 377 LLPFTYAMMLIGSLSLIGFPFLTGFYSKDVILElAYTKYTISGNFAFW------LGSVsvfFTSYYSFRLLFLTFLAPTN 450
Cdd:PRK12644 360 RQPVLAVVAALAAASMAGLPPLLGFVAKEAALE-AVLHDGALGPAGPVvlagivLGSI---LTVAYSLRFLWGAFARKPG 435
|
410 420 430
....*....|....*....|....*....|....*.
gi 464247 451 SF-KRDLSRCHDAPILMAIPLILLAFGSIFVGYLAK 485
Cdd:PRK12644 436 AFpSVAVTEMHRPSPLFLAPPAVLAVLGLVLGLLPA 471
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-409 |
1.57e-57 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 200.76 E-value: 1.57e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 1 MYLLIVILPLIGSFAAGFFGRFLGSRGVAVVTTTCVSLssIFSCIAFYEVALCASACYIkIAPWIfselfdAAWGFLF-- 78
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLGRRRRLQRALSLLASLALL--ALALALLLQVLAGGPLVYA-LGGWP------APFGIVLva 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 79 DSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWFTRI 158
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 159 QAnKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAFSEPhhyflfcnmgfhAITVICILVFIGAVGKSAQ 238
Cdd:COG0651 155 AL-RAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPG------------LLLAAFALLLVGFGIKAAL 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 239 IGLHTWLPDAM-EGPTPVSALIHAAtMVTAGVFMIARCSPLF---EYSPNALIVITFVGAMTSFFAATTGILQNDLKRVI 314
Cdd:COG0651 222 FPLHFWLPDAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLL 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 315 AYSTCSQLGYMIFACGISNYSV---SVFHLMNHACFKALLFLSAGSVIHAmSDEQDMRKMGGLASLLPFTYAMMLIGSLS 391
Cdd:COG0651 301 AYSSVSQIGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERA-TGTRDLDKLGGLGKRMPLTAAAFLIGALA 379
|
410
....*....|....*...
gi 464247 392 LIGFPFLTGFYSKDVILE 409
Cdd:COG0651 380 LAGLPPLSGFVSKWLLLQ 397
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
62-483 |
5.42e-55 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 202.58 E-value: 5.42e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 62 APWIFSELFDAA---WGFLFDSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFL 138
Cdd:PRK12650 58 VTWIPDLLGNGVdvnLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFV 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 139 GWEGVGLASYLLINFwfTRIQANKAAIKAMLINRVGDFGL--ALGIMGCFTifQTVDFSTIFAcASAFSEphhyflfcNM 216
Cdd:PRK12650 138 AWELVSLASFFLIAR--SGSGGEAGSIRTLILTFFGGLTLlaAVAIAATQT--GTTSLSGILH-SDVWAE--------KP 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 217 GFhaITVICILVFIGAVGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMT 296
Cdd:PRK12650 205 GL--TTVVAVLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMIT 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 297 SFFAATTGILQNDLKRVIAYSTCSQLGYMIFACGISN---YSVSVFHLMNHACFKALLFLSAGSVIHAmSDEQDMRKMGG 373
Cdd:PRK12650 283 ALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGS 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 374 LASLLPFTYAMMLIGSLSLIGFPFLTGFYSKDVILELAYTkyTISGNFAFWLGSVSV----FFTSYYSFRLLFLTFLAPT 449
Cdd:PRK12650 362 LWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLE--APGGNAGVVLLLVGAalgaVFTFAYSARLVLGAFVDGP 439
|
410 420 430
....*....|....*....|....*....|....
gi 464247 450 nsfkRDLSRCHDAPILMAIPLILLAFGSIFVGYL 483
Cdd:PRK12650 440 ----RDMSHVKEAPVSLWLPAALPGALSLPLGLV 469
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
3-487 |
1.60e-49 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 180.17 E-value: 1.60e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 3 LLIVILPLIGSFAAGF-FGRFlgSRGVAVVTTTCVSLSSIFSCIAFYEvalcASACYIKIAPWIFSELfdAAWGFLFDSL 81
Cdd:PRK06525 5 LLTLLLPFIGALVVFFlPGRR--AAELGVLFAALTTLCMLSLAYAFYQ----AGKVAVTLTLVNLGDV--ALFGLVIDPV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 82 TVILLLVVTIVSSLVHIYSISYMSE-------DPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFW 154
Cdd:PRK06525 77 SVLIGFVVVLLGLLVTLYSTGYMSPgnrehpvHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYY 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 155 FTRiQANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIfacasafsephhyflfCNMGFHAITVICILVFIGAVG 234
Cdd:PRK06525 157 QSP-KALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSAL----------------SGLHGSLKYLVFLGILFAAWG 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 235 KSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARcspLFEYSPNALIVITFVGAMTSFFAATTGIL----QNDL 310
Cdd:PRK06525 220 KSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFAR---AIQSMGPIPHVIGYVGAVMAIVTLLYGFLmylpQQDM 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 311 KRVIAYSTCSQLGYMIFACGISNY------SVSVFHLMNHACFKALLFLSAGSVIHAMSdEQDMRKMGGLASLLPFTYAM 384
Cdd:PRK06525 297 KRLLAYSTITQLGYMFFGLSLAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSCG-TRLLPRLRGVLKKLPLVGVG 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 385 MLIGSLSLIGFPFLTGFYSKDVILELAytkYTISGNFAFWLGSVSVFFTSYYSFRLLFLTFLApTNSFKRDLSR---CHD 461
Cdd:PRK06525 376 FCVAALAITGVPPFNGFFSKFPIFAAG---FELSVEYWILLPAMVLLLIESVASFAWFLRWFG-RVVFGEPSEAvadAAP 451
|
490 500
....*....|....*....|....*.
gi 464247 462 APILMAIPLILLAFGSIFVGYLAKDM 487
Cdd:PRK06525 452 LPGSMKLVLIVLIVMSLVSPVIAAPW 477
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-481 |
1.92e-45 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 169.51 E-value: 1.92e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 4 LIVILPLIGSFAAGFFGRFLGS-RGVAVVTTTcvSLSSIFSCIAFYEVALCASACYIKIAPWIFSELFDAAWGFLF---- 78
Cdd:PRK08376 9 LLIIIPLFGAFSMPIVSLLGGKaREIWAVLIS--FLTLIVALLVFYEVWNNGTIVYVLGAESPTLTLPFGSGGFPIriiw 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 79 --DSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFML-MLVTGDNFiQLFLGWEGVGLASYLLINFWF 155
Cdd:PRK08376 87 evDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLgMAITGDLF-NFFVFLEIMSIASYALVAFRN 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 156 TRIQANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIfacASAFSEphhyflfcNMGFHAITVIcILVFIGAVGK 235
Cdd:PRK08376 166 DTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYL---AVKMSE--------NPTVVAKIAL-ALFIAGLAMK 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 236 SAQIGLHTWLPDAM-EGPTPVSALIHAATMvtAGVFMIAR-CSPLFEYSPNALIV---ITFVGAMTSFFAATTGILQNDL 310
Cdd:PRK08376 234 SGAVPVHMWLPDAYpAAPSSISAMLLVIKQ--AGLYALARvLFSIYGPAINLATVgwvIIILGCLTMFVGVAMAVVQKDV 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 311 KRVIAYSTCSQLGYMIFACGISNYSVS---------------VFHLMNHACFKALLFLSAGSVIHAMSdEQDMRKMGGLA 375
Cdd:PRK08376 312 KRLLAYHSVSQIGYMLLGLGVGLAALGdpamasygeialaggIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLA 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 376 SLLPFTYAMMLIGSLSLIGFPFLTGFYSKDVILELAYTKYTISGNFAFwlgSVSVFFTSYYsFRLLFLTFLAPTNSfkrD 455
Cdd:PRK08376 391 RTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAM---IGSVLTLASF-VKVFHTAFFGPPSE---K 463
|
490 500
....*....|....*....|....*.
gi 464247 456 LSRCHDAPILMAIPLILLAFGSIFVG 481
Cdd:PRK08376 464 VMNVKEPPKPMLVPMLILAIAIIGMG 489
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
80-474 |
1.17e-43 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 166.24 E-value: 1.17e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 80 SLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWFTRIQ 159
Cdd:PRK07390 89 PVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPL 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 160 ANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAFSEPHHyflfcnmgfhAITVICILVFIGAVGKSAQI 239
Cdd:PRK07390 169 VVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAATANLDPL----------TATLLGLALIAGPTGKCAQF 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 240 GLHTWLPDAMEGPTPVSALIHAAtMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAATTGILQNDLKRVIAYSTC 319
Cdd:PRK07390 239 PLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTS 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 320 SQLGYMIFACGISNYSVSVFHLMNHACFKALLFLSAGSVIhAMSDEQDMRKMGGLASLLPFTYAMMLIGSLSLIGFPFLT 399
Cdd:PRK07390 318 AYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSII-LTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLG 396
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 464247 400 GFYSkdvILELAYTKYTISGnfafWLGSVSVF---FTSYYSFRLLFLTFLAPTNSFKRdlsRCHDAPILMAIPLILLA 474
Cdd:PRK07390 397 GFWA---LLRLADGLWAVSP----WLVGVLLLvnaLTAFNLTRVFRLVFLGKPQQKTR---RSPEVLWPMALPMVILA 464
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-484 |
1.86e-41 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 157.35 E-value: 1.86e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 3 LLIVILPLIGSFAAGFFGRflgSRGVAVVTTTCVSLSSIFSCIAFYEVALCASAcyikIAPWIFseLFDAAWG--FLFDS 80
Cdd:PRK08375 7 PLLVAVPLLAAALIVLLPK---RRRLRWALALLVAALTFALAISLLPQVLDGGV----IAYVVG--GWPPGIGieLRADS 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 81 LTVILLLVVTIVSSLVHIYSISYmsEDPHSPRFF-CYLSIFTFFMLMLVTGDNFiQLFLGWEGVGLASYLLINFWFTRiQ 159
Cdd:PRK08375 78 LSALFLLVTSILAIAALLYAIGY--GEHRQTRFYaLFLLLLAGLLGALLTADLF-NLFVFLEIMSLSSYALVAMGGDR-R 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 160 ANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIfacASAFSEPHhyflfcnmgfhAITVICILVFIGAVGKSAQI 239
Cdd:PRK08375 154 ALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADL---AGALAENP-----------TVVTAFGFVLLALALKAAVF 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 240 GLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCS-----PLFEYSPNALIVITFVGAMTSFFAATTGILQNDLKRVI 314
Cdd:PRK08375 220 PLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVL 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 315 AYSTCSQLGYMIFACGISNYSV---SVFHLMNHACFKALLFLSAGSVIHAmSDEQDMRKMGGLASLLPFTYAMMLIGSLS 391
Cdd:PRK08375 300 AYSTVSQMGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVT-YGTRRLSELSGLGRRMPLTAAAFAVASLS 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 392 LIGFPFLTGFYSKDVILELAYTKYTISGNFAFWLGSVSVFFTSYYSFRLLFltFLAPTNSFKRDLSRchdAPILMAIPLI 471
Cdd:PRK08375 379 LIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAF--FGPPPPGSEAPKQE---APLGMLAPSL 453
|
490
....*....|...
gi 464247 472 LLAFGSIFVGYLA 484
Cdd:PRK08375 454 ALALLSLLLGIYA 466
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
1-484 |
1.93e-37 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 148.50 E-value: 1.93e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 1 MYLLIVILPLIGSFAAGFFGRFLGSRGVAVVTTtcvslssIFSCIAFYEVALCASAcyikiAPWIFSE----------LF 70
Cdd:PRK06521 3 LALQLLLLSLLLYLALGLAGLLLLRRPRLAIRL-------SGPTGLLGGLLGLASG-----LTALFAGptlaavlplgLP 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 71 DAAWGFLFDSLTVILLLVVTIVSSLVHIYSISYMSEDP-HSPRFFC-YLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASY 148
Cdd:PRK06521 71 FLPFHLRLDALSAFFLLVISLLGAAASLYSLGYFREYEgKGPGAMGfFYNLFLASMVLVLLADDAFSFLVAWETMSLSSW 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 149 LLINFWFTRIQANKAAIKAMLINRVGdfglALGIMGCFTIFQTVDFSTIFAcasAFSEPHHyflfcnMGFHAiTVICILV 228
Cdd:PRK06521 151 FLVIANHREAEIRRAGFLYLLMAHAG----ALAILLAFGLLARESGSYDFA---AMRAAHL------SPFWA-SLVFLLA 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 229 FIGAVGKSAQIGLHTWLPDAM-EGPTPVSALIhAATMVTAGVFMIARCSPLFEYSPNA---LIVITFvGAMTSFFAATTG 304
Cdd:PRK06521 217 LFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWwwgVLVLAL-GAISAVLGVLYA 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 305 ILQNDLKRVIAYSTCSQLGYMIFACGIS--------------NYSVSVFHLMNHACFKALLFLSAGSVIHAMSdEQDMRK 370
Cdd:PRK06521 295 LAEHDLKRLLAYSTIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATG-TRDMEK 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 371 MGGLASLLPFTYAMMLIGSLSLIGFPFLTGFYSKDVILE--LAYTKYTISG-NFAFWLGSVSVFFT---SYYSFRLLF-L 443
Cdd:PRK06521 374 LGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQslLSSPGLPQWGlKLAVPIAAAMLALTaalAAMCFVKFYgI 453
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 464247 444 TFLAPTNSFKrdLSRCHDAPILMAIPLILLAFGSIFVGYLA 484
Cdd:PRK06521 454 TFLGRPRSEK--AEEAHEVPRWMRAAMLLLAALCVLLGLLP 492
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
74-489 |
6.43e-37 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 145.06 E-value: 6.43e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 74 WGFLFDSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINF 153
Cdd:MTH00095 39 LKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLF 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 154 WFTrIQANKAAIKAMLINRVGDFGLalgimgcFTIFQTVDFSTIFAcasaFSephhYFLFCNMGFhaitvicILVFIGAV 233
Cdd:MTH00095 119 YNN-WDSNSGAMNTALTNRIGDFFI-------FLFFSGFIFSSYYF----FS----FSFFSSSMI-------LMLLLTSF 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 234 GKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFeYSPNALIVITFVGAMTSFFAATTGILQNDLKRV 313
Cdd:MTH00095 176 TKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLI-LNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKV 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 314 IAYSTCSQLGYMIFACGISNYSVSVFHLMNHACFKALLFLSAGSVIHAMSDEQDMRKMGGLASLLPFTYAMMLIGSLSLI 393
Cdd:MTH00095 255 VALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLC 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 394 GFPFLTGFYSKDVILELAYtkYTISGNFAFWLGSVSVFFTSYYSFRLLFLTFLaptnSFKRDLSRCHDAPILMAIPLILL 473
Cdd:MTH00095 335 GLMFTSGMVSKELILELFF--FNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFL----SFSKVVNVYSSSVLMNFLSLMLV 408
|
410
....*....|....*.
gi 464247 474 AFGSIFVGYLAKDMMI 489
Cdd:MTH00095 409 FFSVFFLWWLNFNLLN 424
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
79-484 |
1.85e-36 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 143.57 E-value: 1.85e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 79 DSLTVILLLVVTIVSSLVHIYSISYMS-EDPHSPRFFCYLSIFTFFMLMLVTGDNFiQLFLGWEGVGLASYLLINFWFTR 157
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEhESGPEWYYTLLLGLEAGMLGILLTGDAF-NLFVMLEVLSISAYGLVAYYRDR 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 158 IQANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAFSEPHHYFLFCNMGFHaITVICILVFIGAVGKSA 237
Cdd:PRK12667 160 GDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGGLAGNPPLA-LGVALALALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 238 QIGLHTWLPDAM-EGPTPVSALIhAATMVTAGVFMIAR--------CSPLFEYSPNALIVITFVGAMTSFFAATTGILQN 308
Cdd:PRK12667 239 IFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRflytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 309 DLKRVIAYSTCSQLGYMIFACGISN---YSVSVFHLMNHACFKALLFLSAGSVIHAmSDEQDMRKMGGLASLLPFTYAMM 385
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHA-AGTRDIDELAGLGRKMPIASFAF 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 386 LIGSLSLIGFPFLTGFYSKDVILElAYtkytISGNFAFWLGSVSVF--FTSYYSFRLLFLTFLAPTnsfKRDLSRCHDAP 463
Cdd:PRK12667 397 LIGALSLVGIPPLNGFFSKLLLFN-AL----LESGFYLPALVLLIAsaISLVGYFRAWYSLFFGKP---KSGEEVEHKES 468
|
410 420
....*....|....*....|.
gi 464247 464 ILMAIPLILLAFGSIFVGYLA 484
Cdd:PRK12667 469 PSMSVVILVLALAVLILGILA 489
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
75-481 |
8.18e-33 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 133.97 E-value: 8.18e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 75 GFLFDSLTVILLLVVTIVSSLVHIYSISYMSEDPHSprffcylsiFTFFMLMLVTG-------DNFIQLFLGWEGVGLAS 147
Cdd:PRK08668 64 TFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAY---------FNMFALMSLAGvlgvflaNDLLTLYIFWEIMTFSS 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 148 YLLINFWFTRiqANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAFSEPhhyflfcnmGFHAITVICIL 227
Cdd:PRK08668 135 FMMVPMGKKE--SRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLINDTST---------GFALIVFLFLL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 228 VFigAVGKSAQIGLHTWLPDAM-EGPTPVSALIHAAtMVTAGVFMIA------------------RCSPLFEYspnaliV 288
Cdd:PRK08668 204 AF--GVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQ-LSKLGAYGFLlvlyvlpgtklfsefgtyRGVPLFNY------I 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 289 ITFVGAMTSFFAATTGILQNDLKRVIAYSTCSQLGYMIFACGISN---YSVSVFHLMNHACFKALLFLSAGSVIHaMSDE 365
Cdd:PRK08668 275 LAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTslgFAGGLFHVFNHALFKGLFFLIFAAVIY-RTGT 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 366 QDMRKMGGLASLLPFTYAMMLIGSLSLIGFPFLTGFYSKDVILELAYTKYTISGNFAFWLGSVSVFFtsyYSFRLLFLTF 445
Cdd:PRK08668 354 TKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFL---YVFRPLAGVF 430
|
410 420 430
....*....|....*....|....*....|....*.
gi 464247 446 LAptnSFKRDLSRCHDAPILMAIPLILLAFGSIFVG 481
Cdd:PRK08668 431 LG---QLPSDHKDVKEAPLPMLIPMAILVLLNVVFG 463
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
3-481 |
2.39e-31 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 128.28 E-value: 2.39e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 3 LLIVILPLIGSFAAGFFGRFLG--SRGVAVVTTTCVSLSSIFSCIAFyeVALCASACYIKIAPWIfsELFDAAWGFLFDS 80
Cdd:COG1008 7 SLLILLPLLGALLLLLLPRRNArlARWVALAVSLLTLLLSLYLLAGF--DPGTGGFQFVESYPWI--PSLGISYHLGVDG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 81 LTVILLLVVTIVSSLVHIYSISYMSEDPHSprFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFW--FTRI 158
Cdd:COG1008 83 ISLPLVLLTALLTPLAILASWNEIKKRPKL--YYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 159 QAnkaAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAFSEPHHYFLFcnmgfhaitvicILVFIG-AVgKSA 237
Cdd:COG1008 161 YA---AIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQLLLF------------LAFFIAfAV-KVP 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 238 QIGLHTWLPDA-MEGPTPVSAlIHAATMVTAGVFMIAR-CSPLF-EYSPNALIVITFVGAMTSFFAATTGILQNDLKRVI 314
Cdd:COG1008 225 MFPFHTWLPDAhVEAPTAGSV-LLAGVLLKMGGYGLLRfALPLFpEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLI 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 315 AYSTCSQLGYMIFACGISN---YSVSVFHLMNHACFKALLFLSAGsVIHAMSDEQDMRKMGGLASLLPFTYAMMLIGSLS 391
Cdd:COG1008 304 AYSSVSHMGFVLLGIFALNplgLQGAVLQMVSHGLITAALFLLVG-VLYDRTHTRDIADLGGLAKRMPVLAALFLLAALA 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 392 LIGFPFLTGFYSKDVILELAYTKYTIsgnFAFwLGSVSVFFTSYYSFRLLFLTFLAPTNSFKRDLsrcHDAPILMAIPLI 471
Cdd:COG1008 383 SLGLPGTSGFVGEFLVLLGAFQVNPW---LAI-LAALGLILTAAYLLWMYQRVFFGPLKEELAEL---PDLNPRELAVLA 455
|
490
....*....|
gi 464247 472 LLAFGSIFVG 481
Cdd:COG1008 456 PLAALILLLG 465
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
79-367 |
4.38e-30 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 124.81 E-value: 4.38e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 79 DSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWFTRI 158
Cdd:PRK08168 68 SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 159 QANKAAIKAMLINRVGD--FGLALGIMgcftiFQTVD---FSTIFACASAfSEPHHYflfcnmgfhaITVICILVFIGAV 233
Cdd:PRK08168 148 FARLAAHKKFIADRLAEllLLAAAALA-----YLEVGslsLSALWAHLAA-QGASPS----------LQAAALLLVLAVI 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 234 GKSAQIGLHTWLPDAMEGPTPVSALIHAAtMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAATTGILQNDLKRV 313
Cdd:PRK08168 212 LKTAQLPVHGWLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVR 290
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 464247 314 IAYSTCSQLGYMIFACGISNYSVSVFHLMNHACFKALLFLSAGSVI-----HAMSDEQD 367
Cdd:PRK08168 291 LAWSTVAQMGFMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAVrdtrlRRLQGPQS 349
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
130-481 |
1.23e-28 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 121.15 E-value: 1.23e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 130 GDnFIQLFLGWEGVGLASYLLInfWFTRI-QANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAFSeph 208
Cdd:PRK12668 113 GD-LLTLFVFWELMAFTSTFLV--WARGTkAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGTAA--- 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 209 hyflfcnmgfhaitvicILVFIGAVGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYspnaLIV 288
Cdd:PRK12668 187 -----------------WLILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTEL----LIY 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 289 ItfvGAMTSFFAATTGILQNDLKRVIAYSTCSQLGYMIFACGIS-----NYSVSvfHLMNHACFKALLFLSAGSVIHaMS 363
Cdd:PRK12668 246 I---GAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGtalaiNGAVA--HAFNHILYKGLLFMSAGAVLY-RT 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 364 DEQDMRKMGGLASLLPFTYAMMLIGSLSLIGFPFLTGFYSKDVILELA-YTKYTISGnFAFWLGSVSVFFTSyySFRLLF 442
Cdd:PRK12668 320 GTEKLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMIISAAgEDHYVWVW-LLLLLASAGTFLHF--GIKLPY 396
|
330 340 350
....*....|....*....|....*....|....*....
gi 464247 443 LTFLAPTNSfkrdlSRCHDAPILMAIPLILLAFGSIFVG 481
Cdd:PRK12668 397 FAFFGGDSG-----LRVKDAPRNMLVAMGIAAFLCIAIG 430
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
62-473 |
9.02e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 117.61 E-value: 9.02e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 62 APWIFSELFDAAWGFLFDSLTVILLLVVTIVSSLVHIYSISYMSED--PHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLG 139
Cdd:PRK06589 65 AQFELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVC 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 140 WEGVGLASYLLINFWFTRIQ--ANKAAIKAMLINRVGDFGLALGIMgcFTIFQTVDFSTIFACASAFSEphhyflfcnmg 217
Cdd:PRK06589 145 YELLTISTAFLIGHTRNNISlsGGYKYLKILMISALLLFLPAVILI--YTKTGNLDFVSGGLFSKNQSI----------- 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 218 fhaitvICILVFIGAVGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIV------ITF 291
Cdd:PRK06589 212 ------ILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIfaefnwLIF 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 292 VGAMTSFFAATTGILQNDLKRVIAYSTCSQLGYMIFACGI---SNYSVSVFHLMNHACFKALLFLSAGSvIHAMSDEQDM 368
Cdd:PRK06589 286 IPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQV 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 369 RKMGGLASLLPFTYAMMLIGSLSLIGFPFLTGFYSKDVILELAY-TKYTISGNFAFWLGSVSVFFTSYYSFRLLFLTFLA 447
Cdd:PRK06589 365 DKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASeQNQPWLSIIVMLVVIASSILSALYLLKILSSIYKP 444
|
410 420
....*....|....*....|....*.
gi 464247 448 ptnSFKRDLSRCHDAPILMAIPLILL 473
Cdd:PRK06589 445 ---SLSENSFITKSLPYLMQISVITC 467
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
1-408 |
1.65e-27 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 116.57 E-value: 1.65e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 1 MYLLIVILPLIGSFAAGFFGRFLGSRGVAVVtttcvsLSSIFSCIAFyeVALCASACYIKIAPwifsELFDAAWGFLFDS 80
Cdd:PRK06458 2 SYSILFALLLLIPLLASLLLFALRKRRLVAT------LNVLGITLTL--ILALWLVFTVPDAG----EIFAAGLWFFIDD 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 81 LTVILLLVVTIVSSLVHIYSISYMSED-------PHSPRF-FCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLIN 152
Cdd:PRK06458 70 LNVFFLALIGVVGFLTSLYSIGYMRHEvehgelsPVTLRLyYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLSSALLVG 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 153 FWFTRiQANKAAIKAMLINRVgdfGLALGIMGcfTIFqtvdfsTIFACASAFSEPHHYFLFCNMGFHA-------ITVIC 225
Cdd:PRK06458 150 IYRTR-ASLEAAWKYIIICSV---GVAFALFG--TIL------VYANAATVMGDGEMAILWTELLKHAslldptlMKLAF 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 226 ILVFIGAVGKSAQIGLHTWLPDA-MEGPTPVSA-----LIHAATMVTAGVFMIARCSPLFEYSPNALIVItfvGAMTSFF 299
Cdd:PRK06458 218 VFLLIGFGTKVGLFPMHAWLPDAhSEAPSPVSAllsgvLLNVALYAVLRYYILIDAAIGSDFPGRLLLIF---GLLSVLV 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 300 AATTGILQNDLKRVIAYSTCSQLGYMIFACGI----SNYSvSVFHLMNHACFKALLFLSAGSVIHAmSDEQDMRKMGGLA 375
Cdd:PRK06458 295 AAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIggplGIFA-ALLHMLNHSLTKSAIFFASGNVLQK-YGTRDINVIRGLL 372
|
410 420 430
....*....|....*....|....*....|...
gi 464247 376 SLLPFTYAMMLIGSLSLIGFPFLTGFYSKDVIL 408
Cdd:PRK06458 373 KVSPLTGWGLMLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
61-481 |
8.72e-27 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 114.48 E-value: 8.72e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 61 IAPWIFSE-------LFDAAWGF--------LFDSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPrffcYLSIFTFFML 125
Cdd:PRK08377 44 IAGWVFMEvyttgkpIIIMAGGWkppvginlYIGPFAALFVLIIAIVSFIMSIFSLKAVEVEPIDK----YAMLFLLLML 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 126 ----MLVTGDNFiQLFLGWEGVGLASYLLINFWFTRiQANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACA 201
Cdd:PRK08377 120 gatgMIATGDIF-NLFVFMEITAITAYALTAYNKTG-EAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLA 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 202 SAfsephhyflfcnMGFHAITVICILVFIGAVGKSAQIGLHTWLPDAMEG-PTPVSALIhAATMVTAGVFMIARCSPLFE 280
Cdd:PRK08377 198 GT------------IDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQ 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 281 YSP---NALIVITFVGAMTSFFAATTGILQNDLKRVIAYSTCSQLGYMIFACGI---SNYSVSVFHLMNHACFKALLFLS 354
Cdd:PRK08377 265 NANgwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALgtqAGVDAGVFHMINHAIVKALLFLA 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 355 AGSVIHAMSDEQdMRKMGGLASLLPFTYAMMLIGSLSLIGFPFLTGFYSKDVILeLAYTKYTISGNFAFWLGSvSVFFTS 434
Cdd:PRK08377 345 VGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGA-SVVEAV 421
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 464247 435 YYsFRLLFLTFLAPTNSFKRDLSrchdapiLMAIPLILLAFGSIFVG 481
Cdd:PRK08377 422 YY-FRLIHTMWFKGEGERIRENA-------AIGIILLLLAALIVVIG 460
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
76-481 |
1.69e-26 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 113.29 E-value: 1.69e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 76 FLFDSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIF-TFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFW 154
Cdd:COG1007 66 FVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFaTLGMMLMASANDLLTLFLGLELLSLSLYVLVAFR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 155 FTRIQANKAAIK---------AMLInrvgdFGLAL--GIMGcftifqTVDFSTIFACASAFSEPHHYFLFcnmGFhaitv 223
Cdd:COG1007 146 RDDRRSSEAALKyfllgalssGFLL-----YGISLlyGATG------SLNLAGIAAALAAGGANSPLLLL---GL----- 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 224 icILVFIGAVGKSAQIGLHTWLPDAMEG-PTPVSALIHAATMVtAGVFMIAR--CSPLFEYSPNALIVITFVGAMTSFFA 300
Cdd:COG1007 207 --VLVLAGLAFKLSAVPFHMWTPDVYEGaPTPVTAFLATAPKI-AAFAALLRllVEAFPGLAADWQLLLAVLAVLSMTVG 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 301 ATTGILQNDLKRVIAYSTCSQLGYM---IFACGISNYSVSVFHLMNHACFKALLFLSAGSVIHAMSDEQDMRKMGGLASL 377
Cdd:COG1007 284 NLAALAQTNVKRMLAYSSIAHAGYLllgLAAGTPLGVSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARR 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 378 LPFTYAMMLIGSLSLIGFPFLTGFYSKDVILELAytkytISGNFaFWLGSVSVFFT---SYYSFRLLFLTFLAPTNSfKR 454
Cdd:COG1007 364 SPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAA-----VEAGL-YWLAVIAVLNSvisAYYYLRVVKAMYFDEPEE-EA 436
|
410 420
....*....|....*....|....*..
gi 464247 455 DLSrchdAPILMAIPLILLAFGSIFVG 481
Cdd:COG1007 437 PIS----APPGLRVALVIAALLVLLLG 459
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
3-483 |
1.80e-26 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 113.38 E-value: 1.80e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 3 LLIVILPLIGSFAAGFFGRFLGSRGVAVVTTTcvslssifsciafyeVALCASACYIKIAPWIFSELFDAAWGFLFDSLT 82
Cdd:PRK05777 11 LLPELILLGAAVVLLLIDAFVRRHSRRATLAV---------------LALLLALVALLFVLGAAGGGTAFGGMLVVDGFA 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 83 VILLLVVTIVSSLVHIYSISYMsEDPHSPRFFcYLSIFTFF-MLMLVTGDNFIQLFLGWEGVGLASYLLINFWFTRIQAN 161
Cdd:PRK05777 76 LFLKGLILLASLLALLLARPYL-EDRGRGEFY-LLVLFALLgMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSL 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 162 KAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFAcASAFSEPHHYFLFCNMGFhaitVICILVF-IGAVgksaqiG 240
Cdd:PRK05777 154 EAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAK-ALADGSGNSLLLLFGLVF----LLVGLAFkLSAV------P 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 241 LHTWLPDAMEG-PTPVSALIHAATMVtAGVFMIARcspLFEYSPNAL-----IVITFVGAMTSFFAATTGILQNDLKRVI 314
Cdd:PRK05777 223 FHMWTPDVYEGaPTPVTAFLATAPKI-AAFAVLLR---LLVVAFGGLsedwqQVLAIIAIASMLVGNLAALSQTNIKRLL 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 315 AYSTCSQLGYM---IFACGISNYSVSVFHLMnhacfkALLFLSAGS--VIHAMSDEQ----DMRKMGGLASLLPFTYAMM 385
Cdd:PRK05777 299 AYSSIAHAGYLlvgLAAGTAEGYSAVLFYLL------AYLFMTLGAfgVISLLRRKGgeaeSISDFAGLSKRSPLLAAVM 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 386 LIGSLSLIGFPFLTGFYSKDVILELAytkytISGNfAFWLGSVSVFFT---SYYSFRLLFLTFLAPTNSFKRDlsrcHDA 462
Cdd:PRK05777 373 TIFMLSLAGIPPTAGFWGKFYVFEAA-----VEAG-LWWLAVIGVLNSaigAFYYLRVIKLMYFDEPPRDAPV----NWP 442
|
490 500
....*....|....*....|.
gi 464247 463 PILMAIPLILLAFGSIFVGYL 483
Cdd:PRK05777 443 LSAGGAVLSVSALLVLVLGIF 463
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
76-409 |
1.45e-25 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 112.13 E-value: 1.45e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 76 FLFDSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPR---FFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLIN 152
Cdd:PRK08667 73 FHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVM 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 153 FWFTRIQANKAAIKAMLINRVGDFGLALGIMGCFtiFQTVDFSTIFACASAFSephhyflfcnmgfhaITVICILVFIGA 232
Cdd:PRK08667 153 NDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLF--IQTGSFELSPLGASAGI---------------LSLVFLLLFLGF 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 233 VGKSAQIGLHTWLPDAMEG-PTPVSALIhAATMVTAGVFMIARCSPLFeYSPNAL--IVITFVGAMTSFFAATTGILQND 309
Cdd:PRK08667 216 GIKAGIIPFHKWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRFLMDV-LSPELWwgVLILLAGSISALLGVIYALKEHD 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 310 LKRVIAYSTCSQLG--------YMIFAC------GISNYSVSVFHLMNHACFKALLFLSAGSVIHAMSDeQDMRKMGGLA 375
Cdd:PRK08667 294 LKGLLAYSSIENIGiilmgiglYVIFGVygldtlALLALGGALFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLV 372
|
330 340 350
....*....|....*....|....*....|....
gi 464247 376 SLLPFTYAMMLIGSLSLIGFPFLTGFYSKDVILE 409
Cdd:PRK08667 373 KLMPYTSALFLVGAVSIAALPPFNGFASELLLYE 406
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
5-419 |
7.12e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 102.72 E-value: 7.12e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 5 IVILPLIGSFAAGFFGRFLGSRGVA--VVTTTCVSLSSIFSCIAFYEVaLCASACYIKIAPWifselfDAAWGFLF--DS 80
Cdd:PRK07691 5 LVILPILIPVITAILLIFLGKRPIIqrYVALIGSLLTLVAAIILVANV-YKHGIQTLELGNW------KAPFGIVFvaDM 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 81 LTVILLLVVTIVSSLVHIYSisYMSEDPHSPRFFCYLSIFtfFMLMLV-----TGDNFiQLFLGWEGVGLASYLLINFWF 155
Cdd:PRK07691 78 FAALLVLTSSIITFLVILYS--FQTIGIERERYYYYPSVL--FMLAGVngaflTGDIF-NLFVFFEVMLMASYVLIVIGG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 156 TRIQAnKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAFSEPHHyflfcnmgfHAITVICILVFIGAVGK 235
Cdd:PRK07691 153 TKIQL-RESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQT---------GLITVVAILFLFVFATK 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 236 SAQIGLHTWLPDAMEGP-TPVSALIhAATMVTAGVFMIARCSPLFEYSPNALI--VITFVGAMTSFFAATTGILQNDLKR 312
Cdd:PRK07691 223 AGLFPLYFWLPGSYYAPpIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSFThyLILILALLTIIFGVIGAVAYFDIKK 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 313 VIAYSTCSQLGYMIFACGISNYSV---SVFHLMNHACFKALLFLSAGSVIHaMSDEQDMRKMGGLASLLPFTYAMMLIGS 389
Cdd:PRK07691 302 IIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFIAA 380
|
410 420 430
....*....|....*....|....*....|.
gi 464247 390 LSLIGFPFLTGFYSKDVILELAYTK-YTISG 419
Cdd:PRK07691 381 LSLAGIPPLSGFYGKFFIVEGTFEAgFYVSG 411
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
132-409 |
1.01e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 101.95 E-value: 1.01e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 132 NFIQLFLGWEGVGLASYLLINFWFTRIQAnKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIfacASAFSEphhyf 211
Cdd:PRK07234 115 DLISLYVALEVLSIATFLLVAYPRTDRAI-WVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGL---ATADPE----- 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 212 lfcnmgfhAITviciLVFIGAVGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLfeySPNALIVITF 291
Cdd:PRK07234 186 --------AFA----LIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD---VPGLDLIVRI 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 292 VGAMTSFFAATTGILQNDLKRVIAYSTCSQLGYMIFACGISnysvSVFHLMnHACFKALLFLSAGsVIHAMSDEQDMRKM 371
Cdd:PRK07234 251 FGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG----GLYALA-HGLVKSTLFLCAG-ALPSRNFTELISQM 324
|
250 260 270
....*....|....*....|....*....|....*....
gi 464247 372 gglaslLPFTYAMML-IGSLSLIGFPFLTGFYSKDVILE 409
Cdd:PRK07234 325 ------LGIGKWIPLtMASFSIAGFPLLAGFVSKVLTLK 357
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
4-476 |
1.01e-21 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 98.86 E-value: 1.01e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 4 LIVILPLIGSFAAGFFGRFLG--SRGVAVVTTTCVSLSSIFscIAFYEVALCASACYIKIAPWIfsELFDAAWGFLFDSL 81
Cdd:TIGR01972 3 LLIFLPLIGALLILLLPSNKDgkARWIALVVALATLLLSLL--LLFQFDPTGSGFQFTEDIPWI--PALGISYHLGVDGI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 82 TVILLLVVTIVSSLVHIYSisyMSEDPHSPRFF--CYLSIFTFFMLMLVTGDnFIQLFLGWEGVGLASYLLINFWfTRIQ 159
Cdd:TIGR01972 79 SLLLVLLTALLTLLAILAS---WESIQKRVKEFyaLLLLLEAGVIGVFLALD-LFLFYVFWEAMLIPMYLLIGVW-GGPN 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 160 ANKAAIKAMLINRVGDFGLALGIMGC-FTIFQTVDFSTIFACASAFSEphHYFLFcnmgfhaitvicILVFIGAVGKSAQ 238
Cdd:TIGR01972 154 RIYAAMKFFLYTLAGSLLMLLAILGLyFLGGGTFDLLELLNLPLPFGV--QTWLF------------LAFFIAFAVKVPL 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 239 IGLHTWLPDAM-EGPTPVSALIHAATMVTAGVFMIARCSPLF-EYSPNALIVITFVGAMTSFFAATTGILQNDLKRVIAY 316
Cdd:TIGR01972 220 FPLHTWLPDAHvEAPTAGSVILAGVLLKMGTYGFLRFNLPLFpDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAY 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 317 STCSQLGYM---IFACGISNYSVSVFHLMNHACFKALLFLSAGsVIHAMSDEQDMRKMGGLASLLPFTYAMMLIGSLSLI 393
Cdd:TIGR01972 300 SSISHMGFVllgIFSFNELGISGAVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASL 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 394 GFPFLTGFYSKDVILELAYTKYTISGnfafWLGSVSVFFTSYYSFRLLFLTFL-APTNSFKRDLSRCHDAPILMAIPLIL 472
Cdd:TIGR01972 379 GLPGTSGFVGEFLILLGSFKVNPVVA----FLAALGIVLAAAYMLTLYKRVFFgELSNPEVAEFPDLNGREIAVLAPLVV 454
|
....
gi 464247 473 LAFG 476
Cdd:TIGR01972 455 LILF 458
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
76-484 |
2.63e-21 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 97.71 E-value: 2.63e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 76 FLFDSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFcylsifTFFMLMLV-------TGDNFiQLFLGWEGVGLASY 148
Cdd:PRK12663 73 FTGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFP------PFILLLMAgvigsflTGDLF-NLYVWFEVMLIASF 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 149 LLINFWFTRIQAnKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAfsephhyflfcnMGFHAITVICILV 228
Cdd:PRK12663 146 VLITLGQEREQL-RGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLND------------MGDTATLTTIALL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 229 FIGAVGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARC-SPLFEYSPNAL-IVITFVGAMTSFFAATTGIL 306
Cdd:PRK12663 213 FLLAFGMKAALFPFMWLPAAYHTPNTEVAALFAALLTKVGIYALIRVfTLLFPQERELLhPLLATMAAITMVIGALGALA 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 307 QNDLKRVIAYSTCSQLGYMIFACGISNY---SVSVFHLMNHACFKALLFLSAGSVIhAMSDEQDMRKMGGLASLLPFTYA 383
Cdd:PRK12663 293 YKDIRRIAGYQVISSIGFILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLV-RLTGYRSLQYLGGLYRKEPLFGA 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 384 MMLIGSLSLIGFPFLTGFYSKDVILELAYtkytisGNFAFWLGSV---SVFFTSYYSFRLLFLTFLAPTNSFKRDLSRch 460
Cdd:PRK12663 372 LFLILIFAIGGLPPFSGFWGKVLLVQGAL------DNGAYILLALmliTSLITMYSLFRIFFLAYWGDKDGEEVNFKP-- 443
|
410 420
....*....|....*....|....
gi 464247 461 dAPILMAIPLILLAFGSIFVGYLA 484
Cdd:PRK12663 444 -IPLYRKLPLSILAVVVIAMGIAA 466
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
76-445 |
4.43e-21 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 97.26 E-value: 4.43e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 76 FLFDSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWF 155
Cdd:MTH00063 41 FDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYD 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 156 TRIQAnKAAIKAMLINRVGDFGLALgimgcftifqtvdfstifacasafsephhyFLFCNMGFHAITVICILVFIGAVG- 234
Cdd:MTH00063 121 NFLSL-RASVVTLVSSRFGDVCLFL------------------------------LIGLSCWGGSGSFLCCLFFFLIVFt 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 235 KSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFeYSPNALIVITFVGAMTSFFAATTGILQNDLKRVI 314
Cdd:MTH00063 170 KSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLL-GFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIV 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 315 AYSTCSQLGYMIFACGISNYSVSVFHLMNHACFKALLFLSAGSVIHAMSDEQDMRKM--GGLASLLPFTYAMMLIGSLSl 392
Cdd:MTH00063 249 ALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVysSILYGSWNLFYLFLLVLGLS- 327
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 464247 393 iGFPFLTGFYSKDVIL-ELAYTKYTISGNFAFWLGsvsVFFTSYYSFRLLFLTF 445
Cdd:MTH00063 328 -GVPFIGVFFSKHFLLsSFSSVVFNVSLLLVVILC---VFLSYLYSFRLCLILF 377
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
4-473 |
2.08e-20 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 94.88 E-value: 2.08e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 4 LIVILPLIGSFAAGFFGRFLG--SRGVAVVTTTCVSLSSIFSCIAFyeVALCASACYIKIAPWIfsELFDAAWGFLFDSL 81
Cdd:PRK05846 8 LLIFLPLIGGLLVLLTERFGArlARWIALIGTLLTLLLSLVLWIGF--DSSNAGFQFVEKHPWI--PRFGISYHLGVDGI 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 82 TVILLLVVTIVSSLVHIYSISYMSEDPHSprFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFW--FTRIq 159
Cdd:PRK05846 84 SLLLVVLTALLTPLAVLASWEEIKKRVKF--YMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWggKNRI- 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 160 anKAAIKAMLINRVGDFGLALGIMGCFTIFQ----TVDFSTIFAcaSAFSEPHHYFLFcnMGFhaitvicilvFIGAVGK 235
Cdd:PRK05846 161 --YAATKFFLYTLLGSLLMLVAIIYLVVVYYnatgTFDIADLLN--LPLPPGVQYWLF--LAF----------FIAFAVK 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 236 SAQIGLHTWLPDAM-EGPTPVSALIHAATMVTAGVFMIARCSPLF-EYSPNALIVITFVGAMTSFFAATTGILQNDLKRV 313
Cdd:PRK05846 225 MPMFPLHTWLPDAHvQAPTAGSVLLAGILLKMGAYGLLRFSLPLFpDASHEFAPIIITLGVIAIIYGALVALAQTDIKKL 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 314 IAYSTCSQLGYMIFACGISN---YSVSVFHLMNHACFKALLFLSAGSVIHAMSDEqDMRKMGGLASLLPFTYAMMLIGSL 390
Cdd:PRK05846 305 IAYSSISHMGFVTLGIFAGNqlgIQGAIFQMISHGLSSAALFLLVGVLYDRLHTR-DIADYGGLAKVMPVLAAFFLFFAM 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 391 SLIGFPFLTGFYSKDVILELAYTKYTIsgnFAFwLGSVSVFFTSYYSFRLLFLTFLAPTNSFKRDLSRCHDAPILMAIPL 470
Cdd:PRK05846 384 ASLGLPGTSGFVGEFLILLGSFQVNPV---IAF-IATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPL 459
|
...
gi 464247 471 ILL 473
Cdd:PRK05846 460 VAL 462
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
76-359 |
9.08e-19 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 90.09 E-value: 9.08e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 76 FLFDSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWF 155
Cdd:PRK08601 68 WHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGLNK 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 156 TRIQANKAAIKAMLINRVGDFGLALGIMGCFTIfqtvdfSTIFACASAFSEPHhyflFCNMGFHAITVICILVFIGAVGK 235
Cdd:PRK08601 148 GWKVAREAAKISGMLFLISWLALALAIVWLFIA------TGEWQLTSVLSNEN----LAQLGTWEKTGINLLLILAVMIP 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 236 SAQIGLHTWLPDAMEGPTPVSALIHAAtMVTAGVFMIARCSPLF--EYSPNALIVITFVGAMTSffaatTGI--LQNDLK 311
Cdd:PRK08601 218 AAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFhdDIAQILLLIFASISVLIG-----TGIslVQVDYK 291
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 464247 312 RVIAYSTCSQLGYMIFACGISNYSVSVFHLMNHACFKALLFLSAGSVI 359
Cdd:PRK08601 292 RQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
68-411 |
1.14e-15 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 80.08 E-value: 1.14e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 68 ELFDAAWGFLFDSLTVILLLVVTIVSSLVhiySISYMSEDPHSprffcylSIFTFFMLM-------LVTGDNFIQLFLGW 140
Cdd:PRK06277 60 NGYHSGITYLFNPAKQIIIFVLSLIASLV---LITGLGEKKSS-------GLYVFLMLMglasvsaIVLADDIFNLYVFF 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 141 EGVGLASYLLINFWFTRiQANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIfacasafsephHYFLFCNMGFHA 220
Cdd:PRK06277 130 EIAAIVQVGLVIASGTE-EAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDI-----------HNALLVNPTSPV 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 221 ITVICILVFIGAVGKSAQIGLHTWLPDAMEGPTP-VSALIHAATMVTAGVFMIA--RCSPLFEYSPNALIVITFVGAMTS 297
Cdd:PRK06277 198 IYGGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPfGSALLQTFSKFVLVALMLVifKLFGGLSYFPSAQGVLIALSVLAM 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 298 FFAATTGILQNDLKRVIAYSTCSQLGYMIFACGISN---YSVSVFHLMNHACFKALLFLSAGSVIHaMSDEQDMRKMGGL 374
Cdd:PRK06277 278 VFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTplgIVAGIFHAINHVIYKSALFLGAGIVSY-RTKTSNLRKLGGL 356
|
330 340 350
....*....|....*....|....*....|....*..
gi 464247 375 ASLLPFTYAMMLIGSLSLIGFPFLTGFYSKDVILELA 411
Cdd:PRK06277 357 LPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAA 393
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
38-404 |
2.47e-15 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 78.84 E-value: 2.47e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 38 LSSIFSCIAFYevalcaSACYIKIAPWIFSELFDAAWGFLF-DSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCY 116
Cdd:TIGR01770 33 LLKNLSYIVLL------SALVSLFLTLQYAAYLFTGFSFFIvDNFALLIKLILLLSTLLTFFFALSYLSKEKINKFEFYI 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 117 LSIFTFF-MLMLVTGDNFIQLFLGWEGVGLASYLLINFWFTRIQANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFS 195
Cdd:TIGR01770 107 LLLFALLgIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFE 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 196 TIFACASAFSEPHHYFlfcNMGFhaitvicILVFIGAVGKSAQIGLHTWLPDAMEG-PTPVSALIHAATMVTA-GVFMIA 273
Cdd:TIGR01770 187 DLLLFLSNGMLNISLL---LLGI-------VLILVGLLFKLSAVPFHMWVPDVYEGaPTPVTAFFSIVPKIAIfAVFLRL 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 274 RCSPLFEYSPNALIVITFVGAMTSFFAATTGILQNDLKRVIAYSTCSQLGYMIFACGISNYsVSVFHLMNHACFKALLFL 353
Cdd:TIGR01770 257 FLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTL-EGIKAVLFYIFIYALMSL 335
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 464247 354 SAGSVIHAMSDEQD-----MRKMGGLASLLPFTYAMMLIGSLSLIGFPFLTGFYSK 404
Cdd:TIGR01770 336 GAFGVLSLLRSYKDewieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGK 391
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
64-114 |
6.98e-15 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 68.99 E-value: 6.98e-15
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 464247 64 WIFSELFDAAWGFLFDSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFF 114
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
226-488 |
2.04e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 76.33 E-value: 2.04e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 226 ILVFIGAVGKSAQIGLHTWLPDA-MEGPTPVSALIhAATMVTAGVFMIARCSPLFEYS---PNALIVITFVGAMTSFFAA 301
Cdd:PRK08676 210 LFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSgaaEQFSNVLIGLGIFSIAVAA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 302 TTGILQNDLKRVIAYSTCSQLGYMIFACGISNYSV---SVFHLMNHACFKALLFLSAGsVIHAMSDEQDMRKMGGLASLL 378
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQ 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 379 PFTYAMMLIGSLSLIGFPFLTGFYSKDVILelaytkytisgnfaFWLGSVSVFFTSYYSFRLL-----FLTFLAPTNSFK 453
Cdd:PRK08676 368 PVAAWGVILGSAAIIGMPPFPLFLSKFFIL--------------LQLGGISVWLVLAVLLLLLlaassFAIFLLKAFTRV 433
|
250 260 270
....*....|....*....|....*....|....*...
gi 464247 454 RDLSRCHD---APILMAIPLILLAFGSIFVGYLAKDMM 488
Cdd:PRK08676 434 SEGNADRPvfrTPLSMKLPIVIILALVLALGVYFPPGL 471
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-481 |
3.48e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 75.54 E-value: 3.48e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 33 TTCVSLSSIFSCIAFYEVALCASACYIKIAPWIFSELFDAAWGFLF------DSLTVILLLVVTIVSSLVHIYSIsYMSE 106
Cdd:PRK12662 23 LKNRKLVKIISCIVVAVSFFIALVLFVQVYSGGVIKYSLGGWGPPYgielrvDILSATMLVLVNFIAVMSVLYGI-YPNR 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 107 DPHS----PRFFC-YLSIFTFFMLMLVTGDNF-IQLFLgwEGVGLASYLLINFWFTRiQANKAAIKAMLINRVGDFGLAL 180
Cdd:PRK12662 102 KEISvnkiPSFYSaFLLCLGGLLGILVSNDVFnIYVFL--EISSISSYVLVAMGRDK-KALVAAFEYLIIGTIGATFYLI 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 181 GIMGCFTIFQTVDFSTIFACASAfsephhyfLFCNmgfHAITVICILVFIGAVGKSAQIGLHTWLPDAM-EGPTPVSALI 259
Cdd:PRK12662 179 GIGFLYAITGTLNMGDMFLIIQD--------LPTN---RAIQIGVLFIMVGLFIKAALFPFHKWLIQAYsEAPSFISVFF 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 260 hAATMVTAGVFMIARC------SPLFEYSPNALIVITFVGAMTSFFAATTGILQNDLKRVIAYSTCSQLGYMIFACGISN 333
Cdd:PRK12662 248 -SGTSTKVMIYLIIRIvydvfkANFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNT 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 334 YS---VSVFHLMNHACFKALLFLSAGSVIHAMsDEQDMRKMGGLASLLPFTYAMMLIGSLSLIGFPFLTGFYSKDVILEL 410
Cdd:PRK12662 327 YYglaAAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDA 405
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 464247 411 AYTKYTISGNFAFWLGSvsvFFTSYYSFRLLFLTFLAPTNSFKRDLSRCHDAPILMAIPLILLAFGSIFVG 481
Cdd:PRK12662 406 FIKSNAWIGLVVLLVGS---GLSVIYVWKIVEALYFESRMVESKANDKAFKTPNAMVLCIWIMAILSIIVG 473
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-409 |
5.42e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 75.00 E-value: 5.42e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 4 LIVILPLIGSFAAGFFGRFlgSRGVAVVTTTCVSLSSIFSCIAFYEVALCASACyIKIAPWifselfDAAWG--FLFDSL 81
Cdd:PRK12665 7 LPVLLPLLAAALTLVLGRR--PRAQRAISLLALSAVLVLSAVLLYLVDRDGTQA-VQLGGW------DAPIGitLVVDRL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 82 TVILLLVVTIVSSLVHIYSIS--YMSEDPHSPrffcyLSIF--TFFMLM------LVTGDNFiQLFLGWEGVGLASYLLI 151
Cdd:PRK12665 78 SALMLVVSSVVLLAVLVYAIGqgIRDGDEEQP-----VSIFlpTYLILVagvsnaFLAGDLF-NLYVGFEILLVASYVLL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 152 NFWFT--RIqanKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAFSEphhyflfcnmGFHAITVICILVF 229
Cdd:PRK12665 152 TLGATaaRV---RAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELPS----------GTRTALFAVLLVA 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 230 IGAvgKSAQIGLHTWLPDAM-EGPTPVSAlIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFAATTGILQN 308
Cdd:PRK12665 219 FGI--KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQS 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 309 DLKRVIAYSTCSQLGYMIFACGISN---YSVSVFHLMNHACFKALLFLSAGsVIHAMSDEQDMRKMGGLASLLPFTYAMM 385
Cdd:PRK12665 296 DIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLF 374
|
410 420
....*....|....*....|....
gi 464247 386 LIGSLSLIGFPFLTGFYSKDVILE 409
Cdd:PRK12665 375 FVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
122-403 |
9.39e-14 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 74.30 E-value: 9.39e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 122 FFMLMLV---------TGDNFIQLFLGWEGVGLASYLLINFWFTRiQANKAAIKAMLINRVGDF-----GLALGIMGCFT 187
Cdd:PRK12561 89 FYFLMLVlysaqigvfLAQDLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASIfilvaGLALALSGDTF 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 188 IFQTVDFStifacasAFSEPHHYFLFCNMGFhaitvicilvFIGAVGKSAQIGLHTWLPDAM-EGPTPVSalihaatMVT 266
Cdd:PRK12561 168 TFDLAELG-------AKSYPLALELLLYAGF----------LIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MIL 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 267 AGV-----------FMIARCSPLFEYSPNALIVITFV----GAMTSFfaattgiLQNDLKRVIAYSTCSQLGYMIFacGI 331
Cdd:PRK12561 224 AGVllkmggyalirFNVQMLPDAHVYFAPALAILGVVniiyGALNAF-------AQDNVKRRLAYSSVSHMGFVLL--GI 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 332 SNY-----SVSVFHLMNHACFKALLFLSAGSV---IHAMSdeqdMRKMGGLASLLPFTYAMMLIGSLSLIGFPFLTGFYS 403
Cdd:PRK12561 295 AAFtdlgiSGAMLQMISHGLIAAALFFLTGVTyerTHTLS----IPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
1-418 |
1.22e-13 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 73.98 E-value: 1.22e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 1 MYLLIVILPLIGSFAAGFFGRFLGS---RGVAVVTTTCVSLSSIFSCIAFyEVALcASACYIKIAPWIfsELFDAAWGFL 77
Cdd:PRK07363 1 MLSVLLWLPILGAIIIGFFPGNLPSarlRQITLVFAVLVLAWSLFLLTQF-DLSD-PGMQFQEYLPWN--EPLGLSYSLG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 78 FDSLTvILLLVVTIVSSLVHIYSISymsEDPHSPRFFcylsiftFFMLMLVTG--------DNFIQLFLGWEGVGLASYL 149
Cdd:PRK07363 77 VDGLS-LPLLVLNSLLTWIAIYSIG---ENTERPRLY-------YSLILLINGgiagallaQNLLLFFLFYELELIPFYL 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 150 LINFWFTRIQAnKAAIKAMLINRVGdfglALGIMGCFTIFQTVDFSTIFACASAFSEphhyflfcNMGFHAITVICILVF 229
Cdd:PRK07363 146 LIAIWGGEKRG-YASIKFLIYTAVS----GLLVLAAFLGIVWLSGSTSFDYDAISTQ--------NLSLNTQLILLTGLL 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 230 IGAVGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCS-PLFeysPNALIVIT----FVGAMTSFFAATTG 304
Cdd:PRK07363 213 LGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGlQLF---PQTWSLVApglaIIGTISVIYGALSA 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 305 ILQNDLKRVIAYSTCSQLGYMIFACGIS-NYSV--SVFHLMNHACFKALLFLSAGsVIHAMSDEQDMRKMGGLASL---L 378
Cdd:PRK07363 290 IAQKDIKRMVAYSSIGHMGYILVAAAAGtQLSLlgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMNPirgL 368
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 464247 379 PFTYAMMLIGSLSLIGFPFLTGFYSKDVILELAYTKYTIS 418
Cdd:PRK07363 369 PLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIP 408
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
239-493 |
2.79e-13 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 72.94 E-value: 2.79e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 239 IGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNAL-IVITFVGAMTSFFAATTGILQNDLKRVIAYS 317
Cdd:PRK08042 197 IPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWgVALLVLGMITAFVGGLYALMEHNIQRLLAYH 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 318 TCSQLGYMIFACGISNYSVS--------------VFHLMNHACFKALLFLSAGSVIHaMSDEQDMRKMGGLASLLPFTYA 383
Cdd:PRK08042 277 TLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWF-RTGHRDIEKLGGIGKKMPVISI 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 384 MMLIGSLSLIGFPFLTGFYSKDVILElAYTKYTISGNF-AFWLG---SVSVFFTSYYSF----RLLFLTFL-APTNsfkR 454
Cdd:PRK08042 356 AMLVGLMAMAALPPLNGFAGEWVIYQ-SFFKLSNSGAFvARLLGpllAVGLAITGALAVmcmaKVYGVTFLgAPRT---K 431
|
250 260 270
....*....|....*....|....*....|....*....
gi 464247 455 DLSRCHDAPILMAIPLILLAFGSIFVGYLAKDMMIGLGT 493
Cdd:PRK08042 432 EAENATCAPLLMSVSVVALAICCVIGGVAAPWLLPMLSA 470
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
83-475 |
1.16e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 64.56 E-value: 1.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 83 VILLLVVTIVSSLVHIYSISYMSEDphsprFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWFTRIQANK 162
Cdd:MTH00226 108 IILTGFIVPCSILISWHSVKYLTKS-----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQ 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 163 AAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASAFSEPHHYFLFCNmgfhaitvicilVFIGAVGKSAQIGLH 242
Cdd:MTH00226 183 AAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSEQTQKWIFLG------------IFLAMAVKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 243 TWLPDA-MEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPN----ALIVITFVGAMTSFFAATTGIlqnDLKRVIAYS 317
Cdd:MTH00226 251 IWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQnlapAVIAMGIVGIVYGSFATCRQI---DVKRLVAYS 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 318 TCSQLGYMIFAC---GISNYSVSVFHLMNHACFKALLFLSAgSVIHAMSDEQDMRKMGGLASLLPFTYAMMLIGSLSLIG 394
Cdd:MTH00226 328 SVAHMGLVSITLvthDIIGLTGSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVA 406
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 395 FPFLTGFYSKDVILELAYTKYTISGNFAFWLGSVSVFFTSYYSFRllfLTFLAPTN--SFKRDLSRchdAPILMAIPLIL 472
Cdd:MTH00226 407 VPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANR---VTFGAPGNliTFARDVNR---REFYITASMVF 480
|
...
gi 464247 473 LAF 475
Cdd:MTH00226 481 FAF 483
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
1-407 |
2.75e-10 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 63.18 E-value: 2.75e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 1 MYLLIVILPLIGSFAAGFFGRFLG---SRGVAVVTTTCVSLSSIFscIAFYEVALCASACYIKIAPWIFSELFDAAWGFl 77
Cdd:PRK06473 1 MLSALIWIPLLGAILIGFWPSGINgklARSVALVIASVLLLLSLV--LAFQFDPGNPNQQFTEFIPWIDSLGLSYHLGV- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 78 fDSLTVILLLVVTIVSsLVHIYSisyMSEDPHSPRFFCYLsiftffMLMLVTG-------DNFIQLFLGWEGVGLASYLL 150
Cdd:PRK06473 78 -DGLSLPLLVLNSLLT-LIAIYS---SDESIQRPRFYYSL------LLLLNAGvsgaflaQDLLLFFLFYELELIPLYLL 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 151 INFWFTRiQANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFStiFACASAFSEPhhyflfcnMGFHAITVICILVFI 230
Cdd:PRK06473 147 IAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFD--YEPLRSHTLP--------LSTQLLLLAPILVGF 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 231 GAvgKSAQIGLHTWLPDA-MEGPTPVSALIhAATMVTAGVFMIARCS-PLFeysPNALIVIT----FVGAMTSFFAATTG 304
Cdd:PRK06473 216 GI--KIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRFGvGLF---PEAWVYLApwlaTWAVVSVLYGASCA 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 305 ILQNDLKRVIAYSTCSQLGYMIFACGIS---NYSVSVFHLMNHACFKALLFLSAGsVIHAMSDEQDMRKMGGLASL---L 378
Cdd:PRK06473 290 IAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGLLNPergL 368
|
410 420
....*....|....*....|....*....
gi 464247 379 PFTYAMMLIGSLSLIGFPFLTGFYSKDVI 407
Cdd:PRK06473 369 PITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
436-642 |
7.23e-09 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 55.63 E-value: 7.23e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 436 YSFRLLFLTFLAPTNSFKrdLSRCHDAPILMAIPLILLAFGSIFVGylakdmmiglgtnfWANSLFILPKNEIlaeseFA 515
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSS--LSPINENNPIMINPIKRLAIGSIIGG--------------SLLSWLIFPKPPM-----MT 59
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 516 TPTIIKLIPILFSTLGSFVAYSVNFVVNPLIFALKTSTFGNrlycFFNKRWFFDKVFNDFLARSFLRFGYeVSFKALDKG 595
Cdd:pfam06455 60 MPLYLKLLALLVTILGLLLGLELSNLSNKQLKKSLNFNLHS----FSGSMWFFPNLSHRLIPKLSLKLGQ-KLAKQIDQG 134
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 464247 596 AIEILGPYGISYTIRKMAQQISKIQSGFVYHYafVMLLGLTIFISVI 642
Cdd:pfam06455 135 WSEKFGPQGIAKTLMTLSKIIQNSQKGLIKIY--LLSFLLWLLLLLL 179
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
75-404 |
6.03e-08 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 55.78 E-value: 6.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 75 GFLFDSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDN-FIQLFLGWEGVGLASYLLINF 153
Cdd:CHL00049 74 NFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANdLITIFVALECLSLCSYLLSGY 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 154 WFTRIQANKAAIKAMLINR------VGDFGLALGIMGCFTIFQTVDFSTIFacasafsephhyFLFCNMGFHAITVICIL 227
Cdd:CHL00049 154 TKKDVRSNEATMKYLLMGGasssilVYGFSWLYGLSGGEIELQEIVNGLIN------------TQMYNSPGISIALIFIT 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 228 VFIGAvgKSAQIGLHTWLPDAMEG-PTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSF-FAATTGI 305
Cdd:CHL00049 222 VGIGF--KLSLAPFHQWTPDVYEGsPTPVVAFLSVTSKVAASALATRIFDIPFYFSSNEWHLLLEILAILSMiLGNLIAI 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 306 LQNDLKRVIAYSTCSQLGYMIFA--CGISNYSVS------VFHL-MNHACFK--ALLFLSAGSvihamsdeQDMRKMGGL 374
Cdd:CHL00049 300 TQTSMKRMLAYSSIGQIGYVIIGiiVGDSNDGYAsmitymLFYIfMNLGTFAciVLFGLRTGT--------DNIRDYAGL 371
|
330 340 350
....*....|....*....|....*....|
gi 464247 375 ASLLPFTYAMMLIGSLSLIGFPFLTGFYSK 404
Cdd:CHL00049 372 YTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
119-403 |
5.44e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 52.79 E-value: 5.44e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 119 IFTFFMLMLVTG-------DNFIQLFLGWEGVGLASYLLINFWFTRiQANKAAIKAMLINRVGD-FGLALGI-MGCFTIF 189
Cdd:PRK02546 116 LFYFLMLAMYGGqiavfavQDMLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSlFILLAALaMAFYGDT 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 190 QTVDFSTIfacaSAFSEPHHYFLFCNMGFhaitvicilvFIGAVGKSAQIGLHTWLPDAM-EGPTPVSALIhAATMVTAG 268
Cdd:PRK02546 195 PTFDMTAL----AAKDFGLGFQLLCYAGL----------LIAYGVKLPIVPLHTWLPDAHgEATAPVHMLL-AGILLKMG 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 269 VFMIARCSPLFEYSPNALI--VITFVGAMTSFFAATTGILQNDLKRVIAYSTCSQLGYMIFacGISNYSV-----SVFHL 341
Cdd:PRK02546 260 GYALLRMNAGMLPDAHAQFapLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLI--GIGSFTDlgtsgAMLQM 337
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 464247 342 MNHACFKALLFLSAGSV---IHA-MSDEqdmrkMGGLASLLPFTYAMMLIGSLSLIGFPFLTGFYS 403
Cdd:PRK02546 338 ISHGLIGASLFFLVGATydrTHTlMLDE-----MGGVGQKMRKMFAMWTACSLASLALPGMSGFVA 398
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
241-457 |
6.37e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 51.81 E-value: 6.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 241 LHTWLPDAMEGPTPVSALIHAATMVTAGVFMIarcsPLFEYSPNALIVITFVGAMTSFFAATTGILQNDLKRVIAYSTCS 320
Cdd:MTH00144 103 FHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLL----SNFLDLYWLAYLLCVISVLSALVGSIGGLNQTQVRALLAYSSIS 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 321 QLGYMIFACgISNYSVSVFHLMNHACFKALLFLSAGsvihaMSDEQDMRKMGGLASLLPFTYAMMLIGsLSLIGFPFLTG 400
Cdd:MTH00144 179 HTGWMLVAI-LHGSWLMWMYFLIYIVSSGFLFFSLW-----SGDSGSMKDLGSLKPSYKTGLSIISLL-LSLGGLPPFLG 251
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 464247 401 FYSKDVILelaytkyTISGNFAFWLGSVSVFFTSYYS-FRLLFLTFLAPTNSFKRDLS 457
Cdd:MTH00144 252 FCSKLLVL-------ISSMESSPLLLILLLLLGSLISlFFYLSVFFSSFLSSSKSKKS 302
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
242-450 |
2.35e-06 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 50.16 E-value: 2.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 242 HTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLfeyspNALIVITFVGAMTSFFAATTGILQNDLKRVIAYSTCSQ 321
Cdd:MTH00011 108 HFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGLGGMNQTQLRPLLAYSSIGH 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 322 LGYMIFACgISNYSVSVFHLMNHACFKALLFLSAGSViHAMSDEQdmrkMGGLASLLPFTYAMMLIGSLSLIGFPFLTGF 401
Cdd:MTH00011 183 MGWMTMIS-VFSPSMAILYFMTYIIITTPLMLLFAYL-NAFSTKF----NSKISSMSQTTSMSLFIMLLSLGGLPPFTGF 256
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 464247 402 YSKDVILELAYTKYTISGNFAFWLGSVSVFFtsyYSFRLLFLTFLAPTN 450
Cdd:MTH00011 257 MPKLMAIETLTSNSMILILLVLIVGSLMNLF---YYLNLIFNFMYLSPT 302
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
84-501 |
3.23e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 50.17 E-value: 3.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 84 ILLLVVTIVSSLVHIYSISYmsedPHSPRFFCYLSIFTFF-MLMLVTGDNFIQLFLGWEGVGLASYLLINFWftrIQANK 162
Cdd:PRK06459 48 FFSIISTIVWILASLYSIEY----DHYGKWLSSLYILTILgMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT---KKNKR 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 163 AAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIFACASafsephhyFLFCNMGFhaITVICILVFIgavgksaqigLH 242
Cdd:PRK06459 121 PAFVFMAFGELSTVLILAGFAWAFIISGTTNFSYLPSPVP--------LILASFGF--IIKMGMMPFL----------VS 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 243 TWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNAL--IVITFVGAMTSFFAATTGILQNDLKRVIAYSTCS 320
Cdd:PRK06459 181 EWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYfgLTILAIGAFSILFGALYAYVSENVKGLLAFSTIE 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 321 QLGYMIFACG--ISNYSVS-----------VFHLMNHACFKALLFLSAGSVihamsdeqdmrKMGGLASLLPFTYAMMLI 387
Cdd:PRK06459 261 NNGAILVALGlyMVTKQLItsiehfslitvILYSFAHSVAKTGLFLSSGLQ-----------EKQSITYSKKIRNRWIEL 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 388 G----SLSLIGFPFLTGFYSKDVILE----LAYTKYTISGNFAFWLGSVSVFFTSYYSFRLL-FLTFLAPTNSFKRDLSR 458
Cdd:PRK06459 330 GltllASSLSGLLPNIGGVASWLLLEslfmFAYVLHNVISILFIVTGAIIAMGEGLATALLIkYITYTSLFRNTKEQLSK 409
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 464247 459 CHDAPILM-AIPLILLAFGSIFVGYLAKDMM--IGLGTNFWANSLF 501
Cdd:PRK06459 410 IKKYPILLsALIVLILGFTLPYLISPFKTSTtiLGMLTNSLILSQY 455
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
140-476 |
1.30e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 48.14 E-value: 1.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 140 WEGVGLASYLLINFWFTRIQANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDfstifacasafsephhYFLFCNMGFH 219
Cdd:MTH00204 141 FEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTD----------------YQILLNIKLP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 220 AITVICILV--FIGAVGKSAQIGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFMIARCSPLFE-----YSPnaliVITF 291
Cdd:MTH00204 205 LSIQKWLLVgfFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPaaseyFAP----LIVM 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 292 VGAMTSFFAATTGILQNDLKRVIAYSTCSQLGYM---IFACGISNYSVSVFHLMNHACFKALLFLsAGSVIHAMSDEQDM 368
Cdd:MTH00204 281 LSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVplgLFTHTIEGLVAAVFLMLAHGFVSSALFI-AVTFLYERHHTRLI 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 369 RKMGGLASLLPFTYAMMLIGSLSLIGFPFLTGFYSKDVILeLAYTKYTIsgnFAFWLGSVSVFFTSYYSFRLL-FLTFLA 447
Cdd:MTH00204 360 KYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSL-LAAFEYSL---GLGVLVTSGMVWSAAYSLYLYnRISFGG 435
|
330 340 350
....*....|....*....|....*....|.
gi 464247 448 PTNS--FKRDLSRCHDAPILmaiPLILLAFG 476
Cdd:MTH00204 436 GSNYllFSRDLNRRELLAIL---PLIIAIFL 463
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
226-407 |
2.20e-05 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 47.63 E-value: 2.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 226 ILVFIG-----AVgKSAQIGLHTWLPDamegpTPVSAliHAAT-MVTAGVFMIARCSPL----FEYSPNALIV----ITF 291
Cdd:CHL00011 211 ILFYIGfliayAV-KLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMGAYGLirinMELLPHAHSIfspwLVI 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 292 VGAMTSFFAATTGILQNDLKRVIAYSTCSQLGYMIFACG-ISNYSVS--VFHLMNHACFKALLFLSAGSVIHAMS----D 364
Cdd:CHL00011 283 VGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGsITDTGLNgaILQIISHGFIGAALFFLAGTSYDRIRlvylD 362
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 464247 365 EqdmrkMGGLASLLPFTYAMMLIGSLSLIGFPFLTGFYSKDVI 407
Cdd:CHL00011 363 E-----MGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIV 400
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
75-404 |
4.15e-05 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 46.58 E-value: 4.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 75 GFLFDSLTVILLLVVTIVSSLVHIYSISYMsEDPHSP--RFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLIN 152
Cdd:PRK02504 73 SFNADNLSIAFRAIIALSTLVTLLMSWRYV-EQSGTPlgEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 153 FWFTRIQANKAAIKAMLINRVGD----FGLAL--GIMGCFTIFQTVdfstifacASAFSEphhyflfcnmGFHAITVICI 226
Cdd:PRK02504 152 YMKRDPRSNEAALKYLLIGAASSaiflYGSSLlyGLSGGSTQLSAI--------ALALIT----------SPSLGLALAL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 227 LVFIGAVG-KSAQIGLHTWLPDAMEG-PTPVSALI----HAATMVTAGVFMIArCSPLFEYSPNALIVITFVGAMTsfFA 300
Cdd:PRK02504 214 VFVIAGIAfKISAVPFHQWTPDVYEGsPTPVVAFLsvgsKAAGFALAIRLLVT-AFPSFDEQWKLLFTALAILSMV--LG 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 301 ATTGILQNDLKRVIAYSTCSQLGY-MI-FACGI-SNYSVSVFHL-----MNHACFKALLFLSagsvIHAMSDEqdMRKMG 372
Cdd:PRK02504 291 NVVALAQTSMKRMLAYSSIGQAGFvMIgLVAGTeAGYASMVFYLlaylfMNLGAFACVILFS----LRTGTDQ--ISDYA 364
|
330 340 350
....*....|....*....|....*....|..
gi 464247 373 GLASLLPFTYAMMLIGSLSLIGFPFLTGFYSK 404
Cdd:PRK02504 365 GLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
288-483 |
8.37e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 45.49 E-value: 8.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 288 VITFVGAMTSFFAATTGILQNDLKRVIAYSTCSQLGYMIFACGIS-----NYSVSVFHLMNHACFKALLFLSAGSVIHAm 362
Cdd:PRK12664 203 ILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSgssgvAIGILILQIVLSVVYQTLLFMVADSVINR- 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 363 SDEQDMRKMGGLASlLPFTYAMMLIGSLSLIGFPFLTGFYSKDVIL---ELAYTKYTISGNFaFWLGSVSVFFTSyySFR 439
Cdd:PRK12664 282 TRKFNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLIThsiDTAGLTLVLYKKL-FLICSLLLFASV--GLK 357
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 464247 440 LLFLTFLAPTNSFKRDLSRCHDAPILMAIPLILLAFGSIFVGYL 483
Cdd:PRK12664 358 FFWYAFISKSKSKPEAEKVYIGSKLSMIILVLICVVLGMFNSYL 401
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
241-409 |
1.40e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 44.53 E-value: 1.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 241 LHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFeySPNALIvitFVGAMTSFFAATTGILQNDLKRVIAYSTCS 320
Cdd:MTH00070 111 FHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLL--NSNLLI---IMGLLSTLIGGWGGLNQTQLRKIMAYSSIA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 321 QLGYMIFACGISNY----SVSVFHLMNHACFKALLFLSAGSvihamsdeqdMRKMGGLASLLPFTYAMMLIGSLSLIGFP 396
Cdd:MTH00070 186 HLGWMIIILTFSPHltllNLLIYLIMTSSMFLMLMNLNSTN----------INKLSSSWSKNPTLTSMMMLTLLSLGGLP 255
|
170
....*....|...
gi 464247 397 FLTGFYSKDVILE 409
Cdd:MTH00070 256 PTTGFIPKWLILQ 268
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
241-437 |
2.26e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 44.04 E-value: 2.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 241 LHTWLPDAMEGPTPVSALIHAATMvtagvfMIARCSPLFEYSPNA-LIVITFVGAMTSFFAATTGILQNDLKRVIAYSTC 319
Cdd:MTH00112 111 FHFWLPEVLQGSTTTTALILSTWQ------KLAPLTLLLMTSNSLnPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSI 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 320 SQLGYMI----FACGISNYSVSVFHLMNHACFKALLFLSAGSvihamsdeqdMRKMGGLASLLPFTYAMMLIGSLSLIGF 395
Cdd:MTH00112 185 AHLGWMIaiitYSPKLTLLTFYIYILMTTPMFLTLNTTSTKT----------LKDMMTSWTKSPTLNTTLMLTLLSLAGL 254
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 464247 396 PFLTGFYSKDVIL-ELAYTKYTISGNFAFWLGSVSVFF---TSYYS 437
Cdd:MTH00112 255 PPLTGFMPKWLILqELTKQNMTPTATIMAMLSLLSLFFylrLTYIS 300
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
242-422 |
2.11e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 40.78 E-value: 2.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 242 HTWLPDAMEG-PTPVSALIhaATMVTAGVFMIarcspLFEYSPNalIVITFVGAMTSFFAATTGIL-QNDLKRVIAYSTC 319
Cdd:MTH00196 115 HMWAPDVYEGaPTKTTALL--AIVPKLGIFSI-----LVSIGLN--VNILLIGGLFSLFVGAIGALnQTKIKRLLAYSGI 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 320 SQLGYMIFACGISNY---SVSVFHLMNHACFKALLFlsagSVIHAMSDEQDMR-KMGGLASLLPFTYAMMLIGSLSLIGF 395
Cdd:MTH00196 186 GHMGFVLWGIEIGSFesiQASLVYLFIYIIMSICVF----SIILALNVYKNLIiEFSGLSRRLPILAITLALTFLSIAGI 261
|
170 180
....*....|....*....|....*...
gi 464247 396 PFLTGFYSK-DVILELAYTKYTISGNFA 422
Cdd:MTH00196 262 PPLVGFLGKwLILLSGVVYQYYLIFLLA 289
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
79-326 |
2.59e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 40.88 E-value: 2.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 79 DSLTVILLLVVTIVSSLVHIYSISYMSEDPHSPRFFCYLSIFTFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWFTRI 158
Cdd:MTH00014 58 DMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQP 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 159 QANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTifacasaFSEPHHYFLFCNMgfhaITVICILVFIGavgKSAQ 238
Cdd:MTH00014 138 ERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLM-------SSMEPPSIYLMNL----WWLITILAFMV---KMPL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 239 IGLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFMIARCSPLFEYS----PNALIVITFVGA-MTSFfaatTGILQNDLKR 312
Cdd:MTH00014 204 YTVHLWLPKAhVEAPVAGS-MILAGILLKLGGYGLLRMSSLFMHInkslSAPFSSISLVGAvITSL----ICIRQPDLKS 278
|
250
....*....|....
gi 464247 313 VIAYSTCSQLGYMI 326
Cdd:MTH00014 279 LIAYSSVGHMGLMT 292
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
28-332 |
3.59e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 40.34 E-value: 3.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 28 VAVVTTTCVSLSSIFSCIAFYEVALCASACYIKIAPWIFSELFDAAWGFLFDSLTVILLLVVTIVSSLVHIYSISYMSED 107
Cdd:MTH00044 9 LGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASINHLSNN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 108 PHS-PRFFCYLSIF-TFFMLMLVTGDNFIQLFLGWEGVGLASYLLINFWFTRIQANKAAIKAMLINRVGDFGLALGIMgc 185
Cdd:MTH00044 89 SPNnQRTFISLIIIiLTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLI-- 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 186 fTIFQTvDFSTIFACASAFSEPHHYFLFCNMgfhaITVICILVFIGavgKSAQIGLHTWLPDA-MEGPTPVSaLIHAATM 264
Cdd:MTH00044 167 -AIYSS-SSSLSIPLSELNWLTSLSSNSSSI----WWIFCILAFLV---KMPIYGFHLWLPKAhVEAPVAGS-MILAAIL 236
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 464247 265 VTAGVFMIARCSPLFeYSPNALIVITFVGAMTSFFAATTGIL---QNDLKRVIAYSTCSQLGYMifACGIS 332
Cdd:MTH00044 237 LKLGGYGLIRLINLF-SLPSANNISFILIVFCCWGALITSIIclrQTDLKALIAYSSVGHMSLV--AAGIF 304
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
240-331 |
3.62e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 40.18 E-value: 3.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 240 GLHTWLPDAMegptpVSALIhAATMVTAGVFM------IARCSPLFEYSPNAL----IVITFVGA-MTSffaaTTGILQN 308
Cdd:MTH00124 211 GLHLWLPKAH-----VEAPI-AGSMVLAAILLklggygIIRITLLLPPLSNTLhypfLTLALWGAlMTS----LICLRQT 280
|
90 100
....*....|....*....|...
gi 464247 309 DLKRVIAYSTCSQLGYMIFACGI 331
Cdd:MTH00124 281 DLKSLIAYSSVSHMGLVIAATMI 303
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
141-473 |
4.55e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 40.04 E-value: 4.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 141 EGVGLASYLLINFWFTRIQANKAAIKAMLINRVGDFGLALGIMGCFTIFQTVDFSTIfaCASAFSEPHHYFLFcnMGFha 220
Cdd:MTH00217 139 EGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQAL--CCLKIEKELQYFIF--LGF-- 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 221 itvicilvFIGAVGKSAQIGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFMIARCSPLF-EYSPNALIVITFVGAMTSF 298
Cdd:MTH00217 213 --------FLSLAIKIPKIPFHIWLPQAhVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLpEASEYFSPLIQTLSLLAII 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 299 FAATTGILQNDLKRVIAYSTCSQLGYM---IFACGISNYSVSVFHLMNHACFKALLFLsAGSVIHAMSDEQDMRKMGGLA 375
Cdd:MTH00217 285 YGSLTTCRQVDLKRIIAYSSVAHMGLVtlgIFSHTIQGLVAAIFLMLAHGLVSSALFI-AVTFLYERHHTRLIKYYRGMV 363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 464247 376 SLLPFTYAMMLIGSLSLIGFPFLTGFYSKDVILELAYTKYTISGNFAfwlgSVSVFFTSYYSFRLL-FLTFLAPTN--SF 452
Cdd:MTH00217 364 ITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLA----SLGMVLSAGYSIYLYnRVCFGAPSKylYF 439
|
330 340
....*....|....*....|.
gi 464247 453 KRDLSRCHDAPILMAIPLILL 473
Cdd:MTH00217 440 SRDLNRREFYVLLPLVFLIYL 460
|
|
| |
