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Conserved domains on  [gi|127052|sp|P23487|]
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RecName: Full=Protein midgut expression 1

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CyoA super family cl34322
Heme/copper-type cytochrome/quinol oxidase, subunit 2 [Energy production and conversion];
26-59 3.21e-03

Heme/copper-type cytochrome/quinol oxidase, subunit 2 [Energy production and conversion];


The actual alignment was detected with superfamily member COG1622:

Pssm-ID: 441229 [Multi-domain]  Cd Length: 229  Bit Score: 34.42  E-value: 3.21e-03
                        10        20        30
                ....*....|....*....|....*....|....
gi 127052    26 MLLSIVFSALLMVVVIGLIVYFTVFYHKDKNTDE 59
Cdd:COG1622  36 FWVSLIIMLVIFVLVFGLLLYFAIRYRRRKGDAD 69
 
Name Accession Description Interval E-value
CyoA COG1622
Heme/copper-type cytochrome/quinol oxidase, subunit 2 [Energy production and conversion];
26-59 3.21e-03

Heme/copper-type cytochrome/quinol oxidase, subunit 2 [Energy production and conversion];


Pssm-ID: 441229 [Multi-domain]  Cd Length: 229  Bit Score: 34.42  E-value: 3.21e-03
                        10        20        30
                ....*....|....*....|....*....|....
gi 127052    26 MLLSIVFSALLMVVVIGLIVYFTVFYHKDKNTDE 59
Cdd:COG1622  36 FWVSLIIMLVIFVLVFGLLLYFAIRYRRRKGDAD 69
 
Name Accession Description Interval E-value
CyoA COG1622
Heme/copper-type cytochrome/quinol oxidase, subunit 2 [Energy production and conversion];
26-59 3.21e-03

Heme/copper-type cytochrome/quinol oxidase, subunit 2 [Energy production and conversion];


Pssm-ID: 441229 [Multi-domain]  Cd Length: 229  Bit Score: 34.42  E-value: 3.21e-03
                        10        20        30
                ....*....|....*....|....*....|....
gi 127052    26 MLLSIVFSALLMVVVIGLIVYFTVFYHKDKNTDE 59
Cdd:COG1622  36 FWVSLIIMLVIFVLVFGLLLYFAIRYRRRKGDAD 69
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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