|
Name |
Accession |
Description |
Interval |
E-value |
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
17-510 |
0e+00 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 821.17 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 17 IFMKAFHLLLFDGSLIFPECILIFGLILLLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTNNF 96
Cdd:CHL00049 1 IFMKAFHLLLFDGSFIFPECILIFGLILLLMIDLTSDQKDIPWLYFISSTSLVMSITALLFQWREEPMISFSGNFQTNNF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 97 NEIFQFLILLCSTLCIPLSVEYIECTEMALTEFLLFILTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRS 176
Cdd:CHL00049 81 NEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDVRS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 177 NEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDV 256
Cdd:CHL00049 161 NEATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 257 YEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVI 336
Cdd:CHL00049 241 YEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 337 IGIIVGDSNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFG 416
Cdd:CHL00049 321 IGIIVGDSNDGYASMITYMLFYIFMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFG 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 417 KIYLFWCGWQAGLYFLVLIGLLTSVLSIYYYLKIIKLLMTGRNQEITPHVRNYRRSPLRSKNSIEFSMIVCVIASTIPGI 496
Cdd:CHL00049 401 KLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTGRNQEITPYVRNYRRSPLRSNNSIELSMIVCVIASTIPGI 480
|
490
....*....|....
gi 288558989 497 SMNPIITIAQDTLF 510
Cdd:CHL00049 481 SMNPIIAIAQDTLF 494
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
59-509 |
2.94e-166 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 480.32 E-value: 2.94e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 59 WLYFISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMALTEFLLFILTATL 138
Cdd:PRK02504 42 WLPYLAIAGLGAALVALALQWDNPNPISFLGSFNADNLSIAFRAIIALSTLVTLLMSWRYVEQSGTPLGEFAAILLTATL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 139 GGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGL 218
Cdd:PRK02504 122 GGMFLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGSTQLSAIALAL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 219 INTQmynSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLL 298
Cdd:PRK02504 202 ITSP---SLGLALALVFVIAGIAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALAIRLLVTAFPSFDEQWKLL 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 299 LEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVgDSNDGYASMITYMLFYISMNLGTFACIVLFGLRTGT 378
Cdd:PRK02504 279 FTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVA-GTEAGYASMVFYLLAYLFMNLGAFACVILFSLRTGT 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 379 DNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAGLYFLVLIGLLTSVLSIYYYLKIIKLLMTGR 458
Cdd:PRK02504 358 DQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISIYYYIRVIKMMVVKE 437
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 288558989 459 NQEITPHVRNYRR--------SPLRsknsieFSMIVCVIASTIPGISMNPIITIAQDTL 509
Cdd:PRK02504 438 PQEMSDVVKNYPEinwnlpgmRPLR------VGLVLCVIATALAGILSNPLFTLANTSV 490
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
59-506 |
6.72e-119 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 357.89 E-value: 6.72e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 59 WLYFISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMALTEFLLFILTATL 138
Cdd:COG1007 34 LLAGLALLGLLLALALLLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATL 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 139 GGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGgEIELQEIVNGL 218
Cdd:COG1007 114 GMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATG-SLNLAGIAAAL 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 219 iNTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLL 298
Cdd:COG1007 193 -AAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFPGLAADWQLL 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 299 LEILAILSMILGNLIAITQTSMKRMLAYSS-----------IGQigyviigiivgdSNDGYASMITYMLFYISMNLGTFA 367
Cdd:COG1007 272 LAVLAVLSMTVGNLAALAQTNVKRMLAYSSiahagylllglAAG------------TPLGVSAALFYLLAYLFMNLGAFA 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 368 CIVLFGLR-TGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAGLYFLVLIGLLTSVLSIYY 446
Cdd:COG1007 340 VILLLSRKgGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYY 419
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 447 YLKIIKLLMTGRNQEitphvrnyrRSPLRSKNSIEFSMIVCVIASTIPGISMNPIITIAQ 506
Cdd:COG1007 420 YLRVVKAMYFDEPEE---------EAPISAPPGLRVALVIAALLVLLLGIFPGPLLDLAA 470
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
66-506 |
6.54e-98 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 304.05 E-value: 6.54e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 66 TSLVMSITALLFR-WREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIEctEMALTEFLLFILTATLGGMFLC 144
Cdd:PRK05777 43 LALLLALVALLFVlGAAGGGTAFGGMLVVDGFALFLKGLILLASLLALLLARPYLE--DRGRGEFYLLVLFALLGMMVMV 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 145 GANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGeIELQEIVNGLINTQMy 224
Cdd:PRK05777 121 SANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGS-LSFAGIAKALADGSG- 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 225 NSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAI 304
Cdd:PRK05777 199 NSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLVVAFGGLSEDWQQVLAIIAI 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 305 LSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGdSNDGYASMITYMLFYISMNLGTFACIVLFGLRTG-TDNIRD 383
Cdd:PRK05777 279 ASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAG-TAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGeAESISD 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 384 YAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAGLYFLVLIGLLTSVLSIYYYLKIIKLLmtgrnqeit 463
Cdd:PRK05777 358 FAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVIKLM--------- 428
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 288558989 464 phvrnYRRSPLRSKNSIEFS------MIVCVIASTIPGISMNPIITIAQ 506
Cdd:PRK05777 429 -----YFDEPPRDAPVNWPLsaggavLSVSALLVLVLGIFPQPLLDLAA 472
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
51-454 |
1.43e-73 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 240.62 E-value: 1.43e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 51 TSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSG--NFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMALTE 128
Cdd:TIGR01770 24 YSRKKRNPLLLKNLSYIVLLSALVSLFLTLQYAAYLFTGfsFFIVDNFALLIKLILLLSTLLTFFFALSYLSKEKINKFE 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 129 FLLFILTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGgE 208
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTG-S 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 209 IELQEIVNGLiNTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPF 288
Cdd:TIGR01770 183 LNFEDLLLFL-SNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIL 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 289 YFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSiGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFAC 368
Cdd:TIGR01770 262 FGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSS-ISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFGV 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 369 IVL--FGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAGLYFLVLIGLLTSVLSIYY 446
Cdd:TIGR01770 341 LSLlrSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFY 420
|
....*...
gi 288558989 447 YLKIIKLL 454
Cdd:TIGR01770 421 YLRVVKVM 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
146-440 |
9.03e-67 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 217.18 E-value: 9.03e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 146 ANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGgEIELQEIVNGLinTQMYN 225
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTG-TLSFDELSKAL--TGGLN 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 226 SPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFL-SVTSKVAASASATRIFdiPFYFSSNEWHLLLEILAI 304
Cdd:pfam00361 78 SSGLLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGYGLIRRSL--LYLPSSPFIQQILLILAI 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 305 LSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDsNDGYASMITYMLFYISMNLGTFACIVLFGL-RTGTDNIRD 383
Cdd:pfam00361 156 ISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGT-IYGIQAAIFHLLTHGLFSAGLFLCAGSVIYrRVHTRNIRD 234
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 288558989 384 YAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAGLYFLVLIGLLTS 440
Cdd:pfam00361 235 YGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| Ndh2_N |
pfam19530 |
NAD(P)H-quinone oxidoreductase subunit 2 N-terminal; This domain represents the N-terminal of ... |
18-117 |
4.83e-40 |
|
NAD(P)H-quinone oxidoreductase subunit 2 N-terminal; This domain represents the N-terminal of NAD(P)H-quinone oxidoreductase subunit 2 (or subunit B), part of the P-module (pumping) of the photosynthetic complex I from plants and cyanobacteria, which is structurally and functionally related to the respiratory complex I from mitochondria and bacteria. It is involved in the electron transfer between photosynthetic complex I and photosystem I.
Pssm-ID: 437362 [Multi-domain] Cd Length: 100 Bit Score: 139.99 E-value: 4.83e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 18 FMKAFHLLLFDGSLIFPECILIFGLILLLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTNNFN 97
Cdd:pfam19530 1 FMKAFHLSLFYGSTIFPECILIFGLISILMIDSTSKQKDIPWLYFISSTSLLLSIFILIFRLKEEPVISFLGNFQADNFN 80
|
90 100
....*....|....*....|
gi 288558989 98 EIFQFLILLCSTLCIPLSVE 117
Cdd:pfam19530 81 KIFRIFIALCSTLCIPLSVE 100
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
138-454 |
2.04e-35 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 135.54 E-value: 2.04e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 138 LGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGeIELQEIVNG 217
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGG-LHLSYINLV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 218 LINTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAasasatrIFDIPFYFSSNEWHL 297
Cdd:MTH00196 83 LNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLG-------IFSILVSIGLNVNIL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 298 LleILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVgDSNDGYASMITYMLFYISMNLGTFACIVLFGlrTG 377
Cdd:MTH00196 156 L--IGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEI-GSFESIQASLVYLFIYIIMSICVFSIILALN--VY 230
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 288558989 378 TDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAGLYFLVLIGLLTSVLSIYYYLKIIKLL 454
Cdd:MTH00196 231 KNLIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIVKIL 307
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
58-451 |
3.01e-34 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 133.73 E-value: 3.01e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 58 PWLYFISST-SLVMSITALLFRWREEPMISFSGNFQT--------NNFNEIFQFLILLCSTLCIPLSVEYIEcTEMALTE 128
Cdd:COG0651 30 RALSLLASLaLLALALALLLQVLAGGPLVYALGGWPApfgivlvaDRLSALFLLLTALVALAVLLYSIGYMR-HERRGRR 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 129 F--LLFILTATLGGMFLcgANDLITIFVAPECFSLCSYLLSGYtKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSG 206
Cdd:COG0651 109 FypLFLLLLAGMNGAFL--TGDLFNLFVFFEVMLLASYGLVAL-GGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATG 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 207 GeielQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASASATRIFD 285
Cdd:COG0651 186 T----LNMADLAARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSgLLTKVGVYAILRVLTL 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 286 IPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIgqigyviigiivgdSNDGYasmityMLFYISMN--L 363
Cdd:COG0651 262 LFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSV--------------SQIGY------ILLGLGLGtpL 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 364 GTFACIV-----------LF------GLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQ 426
Cdd:COG0651 322 GLAGALFhllnhalakalLFlaagaiERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALE 401
|
410 420
....*....|....*....|....*
gi 288558989 427 AGLYFLVLIGLLTSVLSIYYYLKII 451
Cdd:COG0651 402 AGAWLLAAVLLLSSLLTLAYFVRIF 426
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
103-454 |
1.56e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 120.89 E-value: 1.56e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 103 LILLCSTLCIPLSVEYIECTEMALTEFLLFILTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTK 182
Cdd:MTH00199 73 IIIIIGSISILLMGSGETILSEGGQSSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLK 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 183 YLLMGGASSSILVHGFSWLYGSSGgEIELQEIvnglintqmyNSPGI-SIALIFITVGIGFKLSPAPSHQWTPDVYEGSP 261
Cdd:MTH00199 153 YFVLGAVSSGLFLFGCALLYGLTG-ETSIQGI----------NSILTgDVGKILITISLLFKLSAAPFHMWAPDVYEGAP 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 262 TPVVAFLSVTSKVAasasatrIFDI--PFYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGI 339
Cdd:MTH00199 222 TITTALLATVPKIG-------VFSIlvQIGPVTN----VVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGV 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 340 IVgDSNDGYASMITYMLFYISMNLGTFAciVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIY 419
Cdd:MTH00199 291 AI-GSFESIQASLIYMIIYVIMSICSFS--IILSLKLTKGLIVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWL 367
|
330 340 350
....*....|....*....|....*....|....*
gi 288558989 420 LFWCGWQAGLYFLVLIGLLTSVLSIYYYLKIIKLL 454
Cdd:MTH00199 368 ILLSGVSSGYYLICIIAVLSSVIAGVYYVRVVQII 402
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
102-510 |
2.43e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 120.75 E-value: 2.43e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 102 FLILLCSTLCIPLSVEYIECTEMALTEF--LLFILTATLGGMFLCGanDLITIFVAPECFSLCSYLLSGYTKkDVRSNEA 179
Cdd:PRK08375 81 LFLLVTSILAIAALLYAIGYGEHRQTRFyaLFLLLLAGLLGALLTA--DLFNLFVFLEIMSLSSYALVAMGG-DRRALAA 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 180 TTKYLLMGGASSSILVHGFSWLYGSSG--GEIELQEIVNGlintqmynSPGISIALIFITVGIGFKLSPAPSHQWTPDVY 257
Cdd:PRK08375 158 ARKYLIVGLIGSTFLLIGVGLLYGVTGtlNMADLAGALAE--------NPTVVTAFGFVLLALALKAAVFPLHTWLPRAY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 258 EGSPTPVVAFLSVT-SKVAASA----SATrIFDIPFYFSSNeWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQI 332
Cdd:PRK08375 230 PAAPPVVTALLSGLvTKVAVYAliriYFT-VFGGDFRFALG-LGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQM 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 333 GYVIIGIIVGdSNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLA 412
Cdd:PRK08375 308 GYILLGLALL-TPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTS 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 413 GFFGKIYLFWCGWQAGLYFLVLIGLLTSVLSIYYYLKIIKLLMTGrnqeitPHVRNYRRSPLRSKNSIEFSMIVCVIAST 492
Cdd:PRK08375 387 GFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFG------PPPPGSEAPKQEAPLGMLAPSLALALLSL 460
|
410
....*....|....*...
gi 288558989 493 IPGISMNPIITIAQDTLF 510
Cdd:PRK08375 461 LLGIYAGPLLQLADAAAA 478
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-501 |
1.72e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 106.59 E-value: 1.72e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 51 TSDQKDIPWLYFISSTSLVMSITALLFR---WREEPMISFSGNF--------QTNNFNEIFQFLILLCSTLCIPLSVEYI 119
Cdd:PRK12667 27 LKGNRKIQKIYALLVSLITLILSILLFIqvySSNKPIVYLFGGWpapigivyEVDLLGALLGLLTALVMFLILIYSYWYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 120 ECTEMALTEFLLFI-LTATLGGMFLCGanDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGF 198
Cdd:PRK12667 107 EHESGPEWYYTLLLgLEAGMLGILLTG--DAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLAL 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 199 SWLYGSSG--GEIELQEIVNGLINTQMYNSPG-----ISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLS-V 270
Cdd:PRK12667 185 AFLYATFGtlNMADLSAKIRGLSFPLTGGLAGnpplaLGVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSgL 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 271 TSKVAASASAtRIFDIPFYFSSNE---WHLLLEILAIL---SMILGNLIAITQTSMKRMLAYSSIgqigyviigiivgdS 344
Cdd:PRK12667 265 VVNVGAYAII-RFLYTIFGISPSLidfRAALSPILIILgavSAIIGALMMVVQKDVKRLLAYSTI--------------S 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 345 NDGYASM---------ITYMLFYISMNlgTFACIVLF---GL---RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLP 409
Cdd:PRK12667 330 HMGYIFMgigigtqlgLAAALFHIINH--AIAKSLLFlasGVfihAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIP 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 410 PLAGFFGKIYLFWCGWQAGLYFLVLIGLLTSVLSIYYYLKIIKLLMTGRNQEItphvrnyRRSPLRSKNSIEFSMIVCVI 489
Cdd:PRK12667 408 PLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSLFFGKPKSG-------EEVEHKESPSMSVVILVLAL 480
|
490
....*....|..
gi 288558989 490 ASTIPGISMNPI 501
Cdd:PRK12667 481 AVLILGILALFL 492
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
129-506 |
2.58e-22 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 99.84 E-value: 2.58e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 129 FLLFILTATlgGMFLCGanDLITIFVAPECFSLCSYLLSGYTKkDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGE 208
Cdd:PRK08377 114 FLLLMLGAT--GMIATG--DIFNLFVFMEITAITAYALTAYNK-TGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 209 IELQeiVNGLINTQMYNSPGISIALIFItvGIGFKLSPAPSHQWTPDVYEGSPTPV-VAFLSVTSKVAASASATRIFdip 287
Cdd:PRK08377 189 NMAH--IAQLAGTIDPTVAQVGLALLIF--GLAVEAELFPLNAWAPDAYQAAPHPItVMFSAFVVKAGLYAMARILY--- 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 288 FYFSSNEWHLLLE---ILAILSMILGNLIAITQTSMKRMLAYSSiGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLG 364
Cdd:PRK08377 262 LMQNANGWSSVLKlviIMATLTVFFAELSALRQKNVKRMIAYSS-IGQVGMIALALALGTQAGVDAGVFHMINHAIVKAL 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 365 TFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAGLYFLVLIGLLTSVLSI 444
Cdd:PRK08377 341 LFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEA 420
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 288558989 445 YYYLKIIKLLMTGRNQEItphvrnyrrspLRSKNSIEFSMIVCVIASTIPGISMNPIITIAQ 506
Cdd:PRK08377 421 VYYFRLIHTMWFKGEGER-----------IRENAAIGIILLLLAALIVVIGIYPTPFWEVVQ 471
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
130-451 |
4.20e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 99.93 E-value: 4.20e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 130 LLFILTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSN--------EATTKYLLMGGASSSILVHGFSWL 201
Cdd:MTH00198 191 FALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHFpspgntppESGLKYWILGAMSSGFYLFGCALY 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 202 YGSSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASAT 281
Cdd:MTH00198 271 FGFTGNEGMLGTILSATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLT 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 282 RIFDIPfyfssnewHLLLEIlAILSMILGNLIAITQTSMKRMLAYSSiGQIGYVIIGIIVGDSNDGYASMITYMLFYISM 361
Cdd:MTH00198 351 SLVITS--------KLLLSV-AIISLVVGAFGALNQTRIKRLLAYSG-IGHIGFILIGVSAGTYESLQASWTYAVTYLVS 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 362 NLGTFACIVL---FGLRTGTDNIR--------------DYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFW-- 422
Cdd:MTH00198 421 ALASFTVICTleeFGTRTPTSRQRdgsfgnynlvrrlvDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVgs 500
|
330 340 350
....*....|....*....|....*....|....
gi 288558989 423 --CGWQAGL--YFLV-LIGLLTSVLSIYYYLKII 451
Cdd:MTH00198 501 ikIAFSSSLsiYYLVaLFAIICTCISAFYYIRIV 534
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-329 |
4.89e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 93.24 E-value: 4.89e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIEcTEMALTEF--LLFILTATLGGMFLCGanDLITIFVAPECFSLCSYLLSG 168
Cdd:PRK08376 86 WEVDLFGAFMALIATIVSFLAVLYSISYMK-HDTGLDKYytLILLLELGMLGMAITG--DLFNFFVFLEIMSIASYALVA 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 169 YTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGgeielqEIVNGLINTQMYNSPGI--SIALIFITVGIGFKLSP 246
Cdd:PRK08376 163 FRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYG------TLNMAYLAVKMSENPTVvaKIALALFIAGLAMKSGA 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 247 APSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDI-PFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLA 325
Cdd:PRK08376 237 VPVHMWLPDAYPAAPSSISAMLLVIKQAGLYALARVLFSIyGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLA 316
|
....
gi 288558989 326 YSSI 329
Cdd:PRK08376 317 YHSV 320
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
129-450 |
4.19e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 77.68 E-value: 4.19e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 129 FLLFILTATLGGMFLCGanDLITIFVAPECFSLCSYLL--SGYTKKDVRsneATTKYLLMGGASSSILVHGFSWLYGSSG 206
Cdd:PRK07691 112 PSVLFMLAGVNGAFLTG--DIFNLFVFFEVMLMASYVLivIGGTKIQLR---ESIKYVLINVVSSAFFVVAVAILYSVVG 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 207 gEIELQEIVNGLINTQMYNSPGIS-IALIFITVgIGFKLSPAPSHQWTPDVYEGSPTPVVAFL-SVTSKVAASASAtRIF 284
Cdd:PRK07691 187 -TLNMADISVKIAELSAGQTGLITvVAILFLFV-FATKAGLFPLYFWLPGSYYAPPIAIAALFgALLTKVGVYAIA-RTF 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 285 DIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSnDGYASMITYMLFYISMNLG 364
Cdd:PRK07691 264 TLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTE-SGMIGAIYYLIHDMIVKAA 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 365 TFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAGLYFLVLIGLLTSVLSI 444
Cdd:PRK07691 343 LFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVL 422
|
....*.
gi 288558989 445 YYYLKI 450
Cdd:PRK07691 423 YSVIKI 428
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
87-446 |
1.45e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 76.19 E-value: 1.45e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 87 FSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMALTEFLLFILTATLGGMFlcgANDLITIFVAPECFSLCSYLL 166
Cdd:PRK08668 61 FKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAGVLGVFL---ANDLLTLYIFWEIMTFSSFMM 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 167 SGYTKKDVRsnEATTKYLLMGGASSSILVHGFSWLYgSSGGEIELQEIVNGLINTqmyNSPGISIALIFITVGIGF-KLS 245
Cdd:PRK08668 138 VPMGKKESR--KASLKYFVLSAIGAYAMLYAIFLIY-AKTGTFDFADISQGLIND---TSTGFALIVFLFLLAFGVaKAG 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 246 PAPSHQWTPDVYEGSPTPVVAFLS-VTSK--------VAASASATRIF-DIPFYFSSNEWHLLLEILAILSMILGNLIAI 315
Cdd:PRK08668 212 IFPLHVWAPDAYSEAPQSFSAVLSgQLSKlgaygfllVLYVLPGTKLFsEFGTYRGVPLFNYILAWLGNISIIVGTLMAI 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 316 TQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASM---ITYMLFYISMNLGTFACIvlfgLRTGTDNIRDYAGLYTKDP 392
Cdd:PRK08668 292 LQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLfhvFNHALFKGLFFLIFAAVI----YRTGTTKISEMGGLIEKMP 367
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 288558989 393 FLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAGLYFLVLIGLLTSVLSIYY 446
Cdd:PRK08668 368 FTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLY 421
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
129-507 |
4.81e-14 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 74.22 E-value: 4.81e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 129 FLLFiLTATLGGMFLCGanDLITIFVAPECFSLCSYLLS--GYTKKDVRsneATTKYLLMGGASSSILVHGFSWLYGSSG 206
Cdd:PRK12663 113 FILL-LMAGVIGSFLTG--DLFNLYVWFEVMLIASFVLItlGQEREQLR---GAIKYVVLNLIGSWLFLLGIGLLYGTFG 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 207 ----GEIELQeivnglINTQMYNSPGISIALIFITVgIGFKLSPAPSHqWTPDVYEGSPTPVVA-FLSVTSKVAASAsAT 281
Cdd:PRK12663 187 tlnmAHIAMR------LNDMGDTATLTTIALLFLLA-FGMKAALFPFM-WLPAAYHTPNTEVAAlFAALLTKVGIYA-LI 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 282 RIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGdSNDGYASMITYMLFYISM 361
Cdd:PRK12663 258 RVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALG-TPAGINGAIFYLVHDMVV 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 362 NLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAGLYFLVLIGLLTSV 441
Cdd:PRK12663 337 KTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSL 416
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 288558989 442 LSIYYYLKIIkLLMTGRNQeiTPHVRNYRRSPLRSKNSIefsmIVCVIASTIPGISMNPIITIAQD 507
Cdd:PRK12663 417 ITMYSLFRIF-FLAYWGDK--DGEEVNFKPIPLYRKLPL----SILAVVVIAMGIAAEPLLNLTQD 475
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
146-502 |
2.03e-13 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 72.49 E-value: 2.03e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 146 ANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYgSSGGEIELQEIVNGLinTQMYN 225
Cdd:COG1009 130 SDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLG-AIAGTLNFSELLAAA--PTILS 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 226 SPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGsPTPVVAFLSvtskvaasaSAT----------RIFdiPFYFSSNEW 295
Cdd:COG1009 207 SPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEG-PTPVSALLH---------AATmvkagvyllaRLS--PLFALSPVW 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 296 HLLLEILAILSMILGNLIAITQTSMKRMLAYSSIgqigyviigiivgdSNDGY------ASMITYMLFYIsMNLGTF-AC 368
Cdd:COG1009 275 LTVVAIIGAITALFAALIALAQTDIKRVLAYSTV--------------SQLGYmflalgVGAYVAALFHL-LTHAFFkAL 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 369 ivLF---G---LRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAGL--YFLVLIGLLTS 440
Cdd:COG1009 340 --LFlgaGsviHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGlgPLLLAVALLGA 417
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 288558989 441 VLSIYYYLKIIKLLMTGRNQEITPHvrnyrrSPLRSKNSIEFSMIVCVIASTIPGISMNPII 502
Cdd:COG1009 418 FLTAFYSFRLFFLVFFGKPRPKTPK------HPHESPWLMTLPLVVLAVLSLVLGLLLPGLL 473
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
129-506 |
2.79e-13 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 71.89 E-value: 2.79e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 129 FLLFILTATLGGMFLcgANDLITIFVAPECFSLCSYLLSGYTKKDVRSnEATTKYLLMGGASSSILVHGFSWLYGSSGGE 208
Cdd:TIGR01972 110 ALLLLLEAGVIGVFL--ALDLFLFYVFWEAMLIPMYLLIGVWGGPNRI-YAAMKFFLYTLAGSLLMLLAILGLYFLGGGT 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 209 IELQEivngLINTQMYNSPGiSIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASASATriFDIP 287
Cdd:TIGR01972 187 FDLLE----LLNLPLPFGVQ-TWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAgVLLKMGTYGFLR--FNLP 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 288 -FYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIgqigyviigiivgdSNDGY----------ASMITYML 356
Cdd:TIGR01972 260 lFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSI--------------SHMGFvllgifsfneLGISGAVF 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 357 FYISMNLGTFACIVLFGL---RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAGLyFLV 433
Cdd:TIGR01972 326 QMISHGLITAALFLLVGVlyeRAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNP-VVA 404
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 288558989 434 LIGLLTSVLSIYYYLKIIKLLMTGRNQeiTPHVRNYRRSPLRsknsiEFSMIVCVIASTIP-GISMNPIITIAQ 506
Cdd:TIGR01972 405 FLAALGIVLAAAYMLTLYKRVFFGELS--NPEVAEFPDLNGR-----EIAVLAPLVVLILFlGLYPNPLLDLTE 471
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
146-506 |
3.81e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 71.69 E-value: 3.81e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 146 ANDLITIFVAPECFSLCSYLLSGyTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGgeiELQEIVNGLINTQMYN 225
Cdd:PRK12662 129 SNDVFNIYVFLEISSISSYVLVA-MGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITG---TLNMGDMFLIIQDLPT 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 226 SPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRI----FDIPFYFSSNEWHLLLEI 301
Cdd:PRK12662 205 NRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvFKANFVFTTLPFNNVFMI 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 302 LAILSMILGNLIAITQTSMKRMLAYSSIgQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNI 381
Cdd:PRK12662 285 LAALAIVFGSVLAILSKDIKRIFAYSSI-SHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKL 363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 382 RDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAGLYFLVLIGLLTSVLSIYYYLKII-KLLMTGRNQ 460
Cdd:PRK12662 364 EDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKIVeALYFESRMV 443
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 288558989 461 EitphvRNYRRSPLRSKNSIEFSMIVCVIASTIPGISMNPIITIAQ 506
Cdd:PRK12662 444 E-----SKANDKAFKTPNAMVLCIWIMAILSIIVGIYPIPLTLISE 484
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
102-328 |
4.10e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 71.14 E-value: 4.10e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 102 FLILLCSTLCIPLSVEYIECTEMALTEFLLFILTATLGGMFLCGanDLITIFVAPECFSLCSYLLSGYTKKDvRSNEATT 181
Cdd:PRK07234 71 YFILTNALVTLAVIFYCWESAKTRFFYAQLLILHGSVNAAFVCA--DLISLYVALEVLSIATFLLVAYPRTD-RAIWVGL 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 182 KYLLMGGASSSILVHGFSWLYGSSGGeielqeivngLINTQMYNSPGISIALIFitVGIGFKLSPAPSHQWTPDVYEGSP 261
Cdd:PRK07234 148 RYLFYSNVAMLFYLIGAVLVYQANGT----------FAFSGLATADPEAFALIA--LGLLVKGGIFVSGLWLPLTHSEAE 215
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 288558989 262 TPVVAFLS-VTSKVAASASATRIFDIPfyfssnEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK07234 216 PPVSALLSgVVVKAGVFPLVRCALDVP------GLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFST 277
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
133-445 |
1.07e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 70.00 E-value: 1.07e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 133 ILTATLGGMFLCGanDLITIFVAPECFSLCSYLL--SGYTKKDVRsneATTKYLLMGGASSSILVHGFSWLYGSSGG--- 207
Cdd:PRK12665 119 ILVAGVSNAFLAG--DLFNLYVGFEILLVASYVLltLGATAARVR---AGVTYVMVSMVSSLLFLIGIALVYAATGTlnm 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 208 ---EIELQEIvnglintqmynSPGISIAL-IFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVA-FLSVTSKVAASASatr 282
Cdd:PRK12665 194 adlAVRLDEL-----------PSGTRTALfAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAvFAGLLTKVGVYAI--- 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 283 IFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSsigqigyviigiivgdsndgYASMITYMLFYISMN 362
Cdd:PRK12665 260 IRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFT--------------------LVSHIGYMVFGIALS 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 363 --LGTFACIV-----------LF---GL---RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWC 423
Cdd:PRK12665 320 tvAGLSGAIYyvahhitvqttLFlvvGLierQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEA 399
|
330 340
....*....|....*....|....*
gi 288558989 424 GWQAG---LYFLVLIGLLTSVLSIY 445
Cdd:PRK12665 400 GAEDGtwlAWALVAGGVVTSLLTLY 424
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
128-329 |
2.61e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 69.47 E-value: 2.61e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 128 EFLLFILTATLGGMFlcgANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFsWLYGSSGG 207
Cdd:PRK12649 115 QYLLLFMGSMIGMVF---SGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGF-LLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 208 EIELQEIVNG--LINTqMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEgSPTPVVAFLSVTSKVAASAS-ATRIF 284
Cdd:PRK12649 191 TYDIATILQDseLIEN-IKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNAME-APTPVSAFLHSATMVKAGVYlVARIH 268
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 288558989 285 diPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSI 329
Cdd:PRK12649 269 --PIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTI 311
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
94-326 |
3.06e-12 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 68.52 E-value: 3.06e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 94 NNFNEIFQFLILLCSTLCIPLSVEyiECTEMALTEFLLFILTATLGGMFLcgANDLITIFVAPECFSLCS---YLLSGYT 170
Cdd:PRK06277 71 NPAKQIIIFVLSLIASLVLITGLG--EKKSSGLYVFLMLMGLASVSAIVL--ADDIFNLYVFFEIAAIVQvglVIASGTE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 171 kkdvRSNEATTKYLLMGGASSSILVHGFSWLYGSSGgEIELQEIVNGLINTqmYNSPGISIALIFITVGIGFKLSPAPSH 250
Cdd:PRK06277 147 ----EAYKAALKYMILGNVAGSILLLGIGFLLASTG-TLNITDIHNALLVN--PTSPVIYGGLLLLIFGLLYGSGLPPFH 219
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 288558989 251 QWTPDVYEGSPTPVVAFLSVTSK---VAASASATRIFDIPFYFSSNEWHLLLeiLAILSMILGNLIAITQTSMKRMLAY 326
Cdd:PRK06277 220 TIKSDIYAKAKPFGSALLQTFSKfvlVALMLVIFKLFGGLSYFPSAQGVLIA--LSVLAMVFGVVMALLQTDYKRLLAY 296
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
175-450 |
1.30e-11 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 66.11 E-value: 1.30e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 175 RSNEATTKYLLMGGASSSILVHGF---SWLYGSsggeielqeivnglintQMYNSPGISIALIFITVGIGFKLSPAPSHQ 251
Cdd:MTH00041 51 RSVEATIKYFLVQAFSAAILLNGAliqAWLSGS-----------------WSINGPLNTLSSIIITLALALKLGLAPCHF 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 252 WTPDVYEGSPTPVVAFLSVTSKVAAsasatriFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQ 331
Cdd:MTH00041 114 WFPDVLQGLPFLQGLIIATWQKIAP-------LILLISISNLLNSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAH 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 332 IGYVIIGIivgdSNDGYASmITYMLFYISMNLGTFacivLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPL 411
Cdd:MTH00041 187 LGWIIITS----AYSPNAS-IIMFLIYIIINTSIF----LIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLPPL 257
|
250 260 270
....*....|....*....|....*....|....*....
gi 288558989 412 AGFFGKIYLFWCGWQAGLYFLVLIGLLTSVLSIYYYLKI 450
Cdd:MTH00041 258 TGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRI 296
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
126-327 |
5.56e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 64.94 E-value: 5.56e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 126 LTEFLLFIL---TATLGgmfLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLY 202
Cdd:PRK12647 94 LGRFYSYILlfmASMLG---LVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLG 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 203 GSSGgEIELQEIVNGliNTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEgSPTPVVAFLSVTSKVAASasatr 282
Cdd:PRK12647 171 NVTG-TYSLSELLAS--GDVIREHPLYLAILLLVLGGAFTKSAQFPFHFWLPNAME-APTPVSAYLHSATMVKAG----- 241
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 288558989 283 IFDI----PFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYS 327
Cdd:PRK12647 242 IYLLarlnPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYS 290
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
99-328 |
1.86e-10 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 63.41 E-value: 1.86e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 99 IFQFLILLCSTLCIPLSVEYIECTEMALTEF---LLFILTATLGGMFlcgANDLITIFVAPECFSLCSYLLSGYTKKDVR 175
Cdd:PRK12645 82 LFALLITGIGSLVVLYSIYYLSKKKEQLGNFyvyLLLFMGAMLGVVL---SDNLIVLYLFWELTSISSFLLISYWYEREA 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 176 SNEATTKYLL---MGGASssiLVHGFSWLYGSsGGEIELQEIVNGLINTQmyNSPGISIALIFITVGIGFKLSPAPSHQW 252
Cdd:PRK12645 159 SRYGAQKSMLitvFGGLS---MLGGFILLYIM-TGSFSIREMIANADEIQ--NSPLFIPAMILILLGAFTKSAQFPFYIW 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 253 TPDVYEgSPTPVVAFLSVTSKVAAS----ASATRIFDIpfyfsSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK12645 233 LPDAME-APTPVSAYLHSATMVKAGiylvARFTPIFAG-----SQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFST 306
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
129-493 |
2.15e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 62.79 E-value: 2.15e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 129 FLLFILTATLGGMFLcgANDLITIFVAPECFSLCSYLLS---GYTKKdvrsNEATTKYLLMGGASSSILVHGFSWLYGSS 205
Cdd:COG1008 115 ALLLLLEAGMIGVFL--ALDLFLFYVFWELMLIPMYFLIgiwGGERR----IYAAIKFFLYTLAGSLLMLVAILALYFLA 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 206 GGEI-ELQEIVNGLI--NTQMynspgisiaLIFITVGIGF--KLSPAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASAS 279
Cdd:COG1008 189 GALTfDIAELAAAPLplTAQL---------LLFLAFFIAFavKVPMFPFHTWLPDAHVEAPTAGSVLLAgVLLKMGGYGL 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 280 AtRiFDIP-FYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIgqigyviigiivgdSNDGY-----ASMIT 353
Cdd:COG1008 260 L-R-FALPlFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSV--------------SHMGFvllgiFALNP 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 354 Y-----MLFYISMNLGT---FACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGW 425
Cdd:COG1008 324 LglqgaVLQMVSHGLITaalFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAF 403
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 288558989 426 QAGLyFLVLIGLLTSVLSIYYYLKIIKLLMTGrnqEITPHVRNYRRSPLRsknsiEFSMIVCVIASTI 493
Cdd:COG1008 404 QVNP-WLAILAALGLILTAAYLLWMYQRVFFG---PLKEELAELPDLNPR-----ELAVLAPLAALIL 462
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
134-417 |
2.62e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 63.02 E-value: 2.62e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 134 LTATLGGMF-LCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLL---MGGASssILVhGFSWLyGSSGGEI 209
Cdd:PRK12644 112 LVAFAGAMFgLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLvttAGGLA--MLV-GIIIL-GQAAGTY 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 210 ELQEIVNglintQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEgSPTPVVAFLSVTSKVAASasatrIFDI--- 286
Cdd:PRK12644 188 RLSELLA-----DPPTGPAVSVAVVLILVGALSKSAIVPFHFWLPGAMA-APTPVSAYLHAAAMVKAG-----IYLVarl 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 287 -PFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMItyMLFYISMNLGT 365
Cdd:PRK12644 257 aPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLA--MLLAHALFKAA 334
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 288558989 366 FACIVlfGL---RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGK 417
Cdd:PRK12644 335 LFLVV--GIidhSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
223-468 |
3.61e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 58.36 E-value: 3.61e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 223 MYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAAsasatrIFDIPFYFSSNEWHLLLEIL 302
Cdd:MTH00144 77 MYNLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAP------LFLLSNFLDLYWLAYLLCVI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 303 AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVgdsndGYASMITYMLFYISMNLGTFacivlFGLRTGTDNIR 382
Cdd:MTH00144 151 SVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILH-----GSWLMWMYFLIYIVSSGFLF-----FSLWSGDSGSM 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 383 DYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAGLYFLVLIGLLTSVLSIYYYLKIIKLLMTGRNQEI 462
Cdd:MTH00144 221 KDLGSLKPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSK 300
|
....*.
gi 288558989 463 TPHVRN 468
Cdd:MTH00144 301 KSNSSK 306
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
60-328 |
5.77e-09 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 58.59 E-value: 5.77e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 60 LYFISSTSLVMSITALLFRWREEPMISFSGNFQTNNF----NEIFQFLILLCS--TLCIPL-SVEYIECTEMALTEFLLF 132
Cdd:PRK08667 35 LWLVIAIALLLFAGSLQLFTGNPLDIPLWGIAPGLDItfhiDRLAAFFIILIGlvSLCVAIySLGYNEHMSSNERANLLS 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 133 ILTA--TLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGG-EI 209
Cdd:PRK08667 115 ALTAlfILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSfEL 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 210 ELQEivnglintqmYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASASATriFDIPF 288
Cdd:PRK08667 195 SPLG----------ASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSgVMLKVAVYGLVR--FLMDV 262
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 288558989 289 YFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK08667 263 LSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSS 302
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
130-328 |
7.33e-09 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 58.17 E-value: 7.33e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 130 LLFILTATLGGMFLcgANDLITIFVAPECFSLCSYLLSGYTKKDvRSNEATTKYLLMGgASSSILV----HGFSWLYGSS 205
Cdd:PRK06473 112 LLLLLNAGVSGAFL--AQDLLLFFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYT-AISGILIlvsfLGLVWLSGAS 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 206 GGEIELQEIVNGLINTQMynspgisIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRiFD 285
Cdd:PRK06473 188 SFDYEPLRSHTLPLSTQL-------LLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLR-FG 259
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 288558989 286 IPFYFSSneWHLL---LEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK06473 260 VGLFPEA--WVYLapwLATWAVVSVLYGASCAIAQKDMKKMVAYSS 303
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
130-328 |
1.05e-08 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 57.41 E-value: 1.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 130 LLFILTATLGGMFLcgANDLITIFVAPECFSLCSYLLSGYTKKDVRSnEATTKYLLMGGASSSILVHGF---SWLYGSSG 206
Cdd:PRK07363 112 LILLINGGIAGALL--AQNLLLFFLFYELELIPFYLLIAIWGGEKRG-YASIKFLIYTAVSGLLVLAAFlgiVWLSGSTS 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 207 GEIELQEIVNGLINTQMynspgisIALIFITVGIGFKLSPAPSHQWTPDVY-EGSPTPVVAFLSVTSKVAASAsatrIFD 285
Cdd:PRK07363 189 FDYDAISTQNLSLNTQL-------ILLTGLLLGFGIKIPLVPLHTWLPDAYtEASPAVAILLGGVLAKLGTYG----LLR 257
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 288558989 286 IPFYFSSNEWHLLLEILAI---LSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK07363 258 FGLQLFPQTWSLVAPGLAIigtISVIYGALSAIAQKDIKRMVAYSS 303
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
60-466 |
1.26e-08 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 57.46 E-value: 1.26e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 60 LYFISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMALTEFLLFILTATLG 139
Cdd:PRK12646 43 IYFLIQIPSVAKLQYLSTSIPWMKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLPRFYFYLTLFMFS 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 140 GMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEiELQEIVNGli 219
Cdd:PRK12646 123 MIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTN-NITEILGQ-- 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 220 NTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEgSPTPVVAFLSVTSKVAASASATRIFdIPFYFSSNEWHLLL 299
Cdd:PRK12646 200 ADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMA-APTPVSAYLHSATMVKAGIFLLFRF-TPLLGLSNMYIYIV 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 300 EILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGI-----IVGDSNDGYASMITYMLF---YISMNLGTFACIVL 371
Cdd:PRK12646 278 TFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggYAQHQQDAIASIYVFVLFaalFHLMNHAIFKCALF 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 372 FGL-----RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAG---------LYFLVLIGL 437
Cdd:PRK12646 358 MGVgiidhEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGqlsqfslisMIIIVFIGV 437
|
410 420 430
....*....|....*....|....*....|
gi 288558989 438 LTSVLSIYYYLKIIKLLMTGR-NQEITPHV 466
Cdd:PRK12646 438 IASIFTFTYALYMVKEVFWGKyDSKVFTKK 467
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
57-465 |
3.65e-08 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 55.71 E-value: 3.65e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 57 IPWLYFISST-SLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYI----ECTEMALTEFLL 131
Cdd:PRK06458 30 VATLNVLGITlTLILALWLVFTVPDAGEIFAAGLWFFIDDLNVFFLALIGVVGFLTSLYSIGYMrhevEHGELSPVTLRL 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 132 F--ILTATLGGMFLC-GANDLITIFVAPECFSLCSYLLSGyTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYgsSGGE 208
Cdd:PRK06458 110 YygMYQLFLFTMLLAlTSNNLGLMWVAIEATTLSSALLVG-IYRTRASLEAAWKYIIICSVGVAFALFGTILVY--ANAA 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 209 IELQEIVNGLINTQMYNSPG------ISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLS-----------VT 271
Cdd:PRK06458 187 TVMGDGEMAILWTELLKHASlldptlMKLAFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSgvllnvalyavLR 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 272 SKVAASASATRIFDIPfyfssnewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSigqigyviigiivgdsndgyasm 351
Cdd:PRK06458 267 YYILIDAAIGSDFPGR----------LLLIFGLLSVLVAAFFLLRQRDIKRLFAYSS----------------------- 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 352 ITYM---LFYISMN--LGTFACIVL------------FG-----LRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLP 409
Cdd:PRK06458 314 IEHMgliAFALGIGgpLGIFAALLHmlnhsltksaifFAsgnvlQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMP 393
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 288558989 410 PLAGFFGKIYLFWCGWQAGLYF---LVLIGLLTSVLSIYYylKIIKLLMTGRNQEITPH 465
Cdd:PRK06458 394 PFGVFISEFLILTAGLARGPLLiaiLLLLLLTLAFAALVR--RVAGMVFGEPPEAVNRG 450
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
129-450 |
9.37e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 53.82 E-value: 9.37e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 129 FLLFILTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKdVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGe 208
Cdd:MTH00200 6 LPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQ- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 209 ielqeivngLINTQMYNSPGISIalifITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAAsasatriFDIPF 288
Cdd:MTH00200 84 ---------WGISEMLGPLSETL----ILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAP-------FALLI 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 289 YFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIvgdsndgYASMITYMLF--YISMNLGTF 366
Cdd:MTH00200 144 QLAPALNSNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLV-------YSPNLALLYLllYVIITLTVF 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 367 aciVLFGLrTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAGLYFLVLIGLLTSVLSIYY 446
Cdd:MTH00200 217 ---LLLNL-LNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFF 292
|
....
gi 288558989 447 YLKI 450
Cdd:MTH00200 293 YLRL 296
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
76-417 |
2.00e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 53.81 E-value: 2.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 76 LFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIEcTEMALTEFLLFILTATLGGMFLCGANDLITIFVA 155
Cdd:MTH00032 61 LYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMS-DDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIG 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 156 PECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGS---------SGGEIELQEIVNGLINTQMYNS 226
Cdd:MTH00032 140 WEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTigsldfltfNGGSVGSGIMDRGYYGGGAYES 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 227 PGISIALIFITVGIGF--KLSPAPSHQWTPDVYEGsPTPVVAFLSVTSKVAASASATrIFDIPFYFSSNEWHLLLEILAI 304
Cdd:MTH00032 220 PLAPFAIIGILLLIGCigKSAQLGLHTWLPDAMEG-PTPVSALIHAATMVTAGVFLM-IRSFPLFEKAPLTLLIITIFGA 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 305 LSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDS-NDGYASMITYMLFYISMNLGtfACIVLFGLRTGTDNIRD 383
Cdd:MTH00032 298 LTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGShNVGLFHLVNHAFFKALLFLS--AGSVIHSTTVDEQDMRK 375
|
330 340 350
....*....|....*....|....*....|....
gi 288558989 384 YAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGK 417
Cdd:MTH00032 376 MGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSK 409
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
179-328 |
2.45e-07 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 53.28 E-value: 2.45e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 179 ATTKYLLMGGASSSILVHGFSWLY---GSSGGEIELQEIVNGLINTQMYNspgisiaLIFITVGIGF--KLSPAPSHQWT 253
Cdd:PRK05846 162 AATKFFLYTLLGSLLMLVAIIYLVvvyYNATGTFDIADLLNLPLPPGVQY-------WLFLAFFIAFavKMPMFPLHTWL 234
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 288558989 254 PDVYEGSPTPVVAFLS-VTSKVAASAsATRiFDIPFY-FSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK05846 235 PDAHVQAPTAGSVLLAgILLKMGAYG-LLR-FSLPLFpDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSS 309
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
76-329 |
4.73e-07 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 52.39 E-value: 4.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 76 LFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIEcTEMALTEFLLFILTATLGGMFLCGANDLITIFVA 155
Cdd:MTH00020 61 LWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMR-GDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIG 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 156 PECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGgEIELQEIVNGLIntqMYNSPGISIALIF 235
Cdd:MTH00020 140 WEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFG-SLDFSSVFNMVV---SAPSSDITLICLF 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 236 ITVGIGFKLSPAPSHQWTPDVYEGsPTPVVAFLSVTSKVAASASATrIFDIPFYFSSNEWHLLLEILAILSMILGNLIAI 315
Cdd:MTH00020 216 LFIGAVGKSAQLGLHTWLPDAMEG-PTPVSALIHAATMVTAGVFLL-IRSSPLFEQAPLALIIVTIVGSLTVFFAATVGL 293
|
250
....*....|....
gi 288558989 316 TQTSMKRMLAYSSI 329
Cdd:MTH00020 294 VQNDLKKVIAYSTC 307
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
148-329 |
8.26e-07 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 51.56 E-value: 8.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 148 DLITIFVAPECFSLCSYLLSG--YTKKDvrSNEATTKY----------LLMGgasssILvhGFSWLYGSsggeIELQEIV 215
Cdd:PRK07376 143 NLVQIYVFWELVGMCSYLLVGfwYDRKG--AADAAQKAfvvnrvgdfgLLLG-----IL--GLFWATGS----FDFDGIA 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 216 NGLinTQMYNSPGISIAL-----IFITVGIGFKLSPAPSHQWTPDVYEGsPTPVVAFLSVTSKVAASAS-ATRIFdiPFY 289
Cdd:PRK07376 210 DRL--SELVSSGAVSGWLalllcILVFLGPMAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGVFlVARMY--PVF 284
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 288558989 290 fssNEWHLLLEILAILSMI---LGNLIAITQTSMKRMLAYSSI 329
Cdd:PRK07376 285 ---EQFPAVMTVIAWTGAItafLGASIALTQNDIKKGLAYSTI 324
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
126-328 |
8.61e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 51.97 E-value: 8.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 126 LTEFLLFILTATLggmflcgANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSsiLVHGFSWLYGSS 205
Cdd:PRK12650 116 MTAFMAAMLLLVL-------ADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRTLILTFFGGLT--LLAAVAIAATQT 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 206 GgEIELQEIvngLINTQMYNSPGISIALIFITVGIGF-KLSPAPSHQWTPDVYeGSPTPVVAFLSVTSKVAASASATRIF 284
Cdd:PRK12650 187 G-TTSLSGI---LHSDVWAEKPGLTTVVAVLIAVAAFtKSAQFPFHFWLPEAM-AAITPVSAFLHAAAVVKAGIYLLLRF 261
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 288558989 285 DIpfYFSSNE-WHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK12650 262 SP--VFHDVAvWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYST 304
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
128-328 |
1.84e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 50.66 E-value: 1.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 128 EFLLFIltATLGGMFLcgANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGG 207
Cdd:PRK06521 118 FYNLFL--ASMVLVLL--ADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGS 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 208 -------EIELqeivnglintqmynSPGI-SIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASA 278
Cdd:PRK06521 194 ydfaamrAAHL--------------SPFWaSLVFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSgVMLKVAIYG 259
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 288558989 279 satrIFDIPFYFSSNE---WHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK06521 260 ----ILRVVFDLLGAPgwwWGVLVLALGAISAVLGVLYALAEHDLKRLLAYST 308
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
129-328 |
7.36e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 48.49 E-value: 7.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 129 FLLFILTATLGGMFLcgANDLITIFVAPECFSLCSYLLS---GYTKKDVrsneATTKYLLMGGASS-SILVHGFSWLYGS 204
Cdd:PRK12561 91 FLMLVLYSAQIGVFL--AQDLLLFFLMWELELVPVYLLIsiwGGQKRLY----AATKFILYTALASiFILVAGLALALSG 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 205 SGGEIELQEIVNglintqmyNSPGISIALIFIT---VGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASA-- 278
Cdd:PRK12561 165 DTFTFDLAELGA--------KSYPLALELLLYAgflIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAgVLLKMGGYAli 236
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 288558989 279 --SATRIFDIPFYFSSnewhlLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK12561 237 rfNVQMLPDAHVYFAP-----ALAILGVVNIIYGALNAFAQDNVKRRLAYSS 283
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
175-328 |
7.39e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 47.99 E-value: 7.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 175 RSNEATTKYLLMGGASSSILVhgFS-----WLYGssggEIELqeivnglINTQMynspgiSIALIFITVGIGFKLSPAPS 249
Cdd:MTH00070 51 RATEAATKYFLTQASASALIL--FSstinaWFTG----EWTI-------MNMQT------PLPTIMLTIALMMKLGIAPF 111
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 288558989 250 HQWTPDVYEGSPTPVVAFLSVTSKVAasaSATRIFDIPFYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:MTH00070 112 HFWLPEVLQGLDLTTGLILSTWQKLA---PMALLIQISHLLNSN----LLIIMGLLSTLIGGWGGLNQTQLRKIMAYSS 183
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
175-450 |
2.21e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 46.74 E-value: 2.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 175 RSNEATTKYLLMGGASSSILVhgFS-----WLYGSsgGEIelqeivnglinTQMYNSPgisiALIFITVGIGFKLSPAPS 249
Cdd:MTH00112 51 RATEAATKYFLTQAAASALIL--FSsttnaWNTGQ--WDI-----------TQLTNPT----SCTLLTLALAMKLGLAPF 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 250 HQWTPDVYEGSPTPVVAFLSVTSKVAASAsatrifdIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSI 329
Cdd:MTH00112 112 HFWLPEVLQGSTTTTALILSTWQKLAPLT-------LLLMTSNSLNPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSI 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 330 gqigyviigiivgdSNDGY-ASMITY--------MLFYISMNLGTFACIVLfglrTGTDNIRDYAGLYTKDPFLALSLAL 400
Cdd:MTH00112 185 --------------AHLGWmIAIITYspkltlltFYIYILMTTPMFLTLNT----TSTKTLKDMMTSWTKSPTLNTTLML 246
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 288558989 401 CLLSLGGLPPLAGFFGKiylfwcgW-------QAGLYFLVLIGLLTSVLSIYYYLKI 450
Cdd:MTH00112 247 TLLSLAGLPPLTGFMPK-------WlilqeltKQNMTPTATIMAMLSLLSLFFYLRL 296
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
87-451 |
2.29e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 46.73 E-value: 2.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 87 FSGNFQTNNFNEIFQFLI---LLCSTLCIP--LSVEYIECTemalTEFLLFILTATLGGMFLCGANDLITIFVAPECFSL 161
Cdd:PRK06589 75 YSIGLHLEPLGLIFLLLIgflWICALLYTPkyLAINNIDSS----SRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 162 CSYLLSGYTKKDVrSNEATTKYLLMGGASSSIL-VHGFSWLYGSSGgeiELQEIVNGLINTqmynSPGISIALIFItVGI 240
Cdd:PRK06589 151 STAFLIGHTRNNI-SLSGGYKYLKILMISALLLfLPAVILIYTKTG---NLDFVSGGLFSK----NQSIILLLMFI-YGI 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 241 GfKLSPAPSHQWTPDVYEgSPTPVVAFLSVTSKVAASA-----SATRIFDIPF---YFSSNEWhllLEILAILSMILGNL 312
Cdd:PRK06589 222 A-KTAIFPVHSWLPAAMV-AHYPVSALLHAVIVVKTGLfciykILLYIFGLSYlqrIFAEFNW---LIFIPIVSIFYSSL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 313 IAITQTSMKRMLAYSSIgqigyviigiivgdSNDGYASMITYMLFYISMNLGT-------FACIVLFGL------RTGTD 379
Cdd:PRK06589 297 KALKTDNIKKILAYSTI--------------SQLSLALLSAFILTPKALGAAIlhlvshsFAKICLFYSmgsiysLKKED 362
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 288558989 380 NIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAGL----YFLVLIGLLTSVLSIYYYLKII 451
Cdd:PRK06589 363 QVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQpwlsIIVMLVVIASSILSALYLLKIL 438
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
130-484 |
8.37e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 44.77 E-value: 8.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 130 LLFILTATLGGMFLCGANDLITIFVAPEcFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSggei 209
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGME-LNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFP---- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 210 elqeivnglintqmynSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAAsasatriFDIPFY 289
Cdd:MTH00011 84 ----------------SLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAP-------LSILFF 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 290 FSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSndgyaSMITYMLFYISMNLGTFacI 369
Cdd:MTH00011 141 FTSHNILPMMTSMAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPS-----MAILYFMTYIIITTPLM--L 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 370 VLFGLRTGTDNIRDYAGLYTkdPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAGLYFLVLIGLLTSVLSIYYYLK 449
Cdd:MTH00011 214 LFAYLNAFSTKFNSKISSMS--QTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLN 291
|
330 340 350
....*....|....*....|....*....|....*
gi 288558989 450 IIKLLMTgrnqeITPHVRNYRRSPLRSKNSIEFSM 484
Cdd:MTH00011 292 LIFNFMY-----LSPTFSSLKSAPYEPKTKILISM 321
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
136-329 |
2.25e-04 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 43.73 E-value: 2.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 136 ATLGGMFlcgANDLITIFVAPECFSLCSYLL--SGYTKKDVRsneATTKYLLMGGASSSILVHGFSWLYGSSGGeielqe 213
Cdd:PRK12668 105 SALGAVF---AGDLLTLFVFWELMAFTSTFLvwARGTKAAVR---AGFRYLLVHVLGGVLLLAGILLHYAETGS------ 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 214 ivngLINTQMYNSPGISIALIFItvGIGFKLSPAPSHQWTPDVY-EGSPTPVVaFLSV-TSKVAASASAtRIFDipfyfs 291
Cdd:PRK12668 173 ----FAFGAIAGLGGTAAWLILI--GFGVNAAFPPLHAWLPDAYpEATVTGSV-FLSAfTTKTAVYALA-RAFP------ 238
|
170 180 190
....*....|....*....|....*....|....*...
gi 288558989 292 snEWHLLLEILAILSmILGNLIAITQTSMKRMLAYSSI 329
Cdd:PRK12668 239 --GTELLIYIGAAMA-VYGVFFALLENDLRRLLSYHIV 273
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
130-328 |
2.84e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 42.89 E-value: 2.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 130 LLFILTATLGGMFLCGANDLITIFVAPEcFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVhgFSwlygssggei 209
Cdd:MTH00160 8 LLFLSTLIMGTLISISSNSWFGAWMGLE-INLLSFIPLISNKKNLMSSESSLKYFLIQALASIILL--FS---------- 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 210 elqeivngLINTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAasasatrifdiPFY 289
Cdd:MTH00160 75 --------IILNMLNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIA-----------PLI 135
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 288558989 290 -FSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:MTH00160 136 lLSYLINNNFIIIIIILSAIIGAIGGLNQTSLRKILAYSS 175
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
129-493 |
3.76e-04 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 43.04 E-value: 3.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 129 FLLFILTATLGGMFlcgANDLITIFVAPECFSLCSYLLSGYTKKDvRSNEATTKYLLMGGASSSILVHGFSWLYgSSGGE 208
Cdd:PRK06525 118 FLLLFIGAMAGLVY---SSTLLGLLLFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLF-LQTGT 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 209 IELQEIvNGLintqmyNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGsPTPVVAFLSVTSKVAASA--------SA 280
Cdd:PRK06525 193 FALSAL-SGL------HGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEA-PTPASAYLHAASMVKVGVyifaraiqSM 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 281 TRIFDIPFYFSSnewhllleILAILSMILGNLIAITQTSMKRMLAYS--SIGQIGYVIIGIIVGDSNDGYASMITYM--- 355
Cdd:PRK06525 265 GPIPHVIGYVGA--------VMAIVTLLYGFLMYLPQQDMKRLLAYStiTQLGYMFFGLSLAILGSRLALEGSIAYIfnh 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 356 -----LFYISMNLGTFACivlfglrtGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAGLY 430
Cdd:PRK06525 337 afaksLFFLVAGALSYSC--------GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVE 408
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 288558989 431 FLVLIGLLT-----SVLSIYYYLKIIKLLMTGrnqEITPHVRNYRRSPLrsknSIEFSMIVCVIASTI 493
Cdd:PRK06525 409 YWILLPAMVlllieSVASFAWFLRWFGRVVFG---EPSEAVADAAPLPG----SMKLVLIVLIVMSLV 469
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
149-329 |
1.06e-03 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 41.80 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 149 LITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKY----------LLMGgasssILvhGFSWLYGSSggEIE-LQEIVNG 217
Cdd:CHL00025 144 LIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAfvtnrvgdfgLLLG-----IL--GFYWITGSF--EFRdLFEIFNN 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 218 LINTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGsPTPVVAFLSVTSKVAAS----ASATRIFD-IPFYFSS 292
Cdd:CHL00025 215 LIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGiflvARLLPLFIvIPYIMNL 293
|
170 180 190
....*....|....*....|....*....|....*..
gi 288558989 293 NEWhllleiLAILSMILGNLIAITQTSMKRMLAYSSI 329
Cdd:CHL00025 294 ISL------IGIITALLGATLALAQKDIKRGLAYSTM 324
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
224-451 |
6.49e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 38.89 E-value: 6.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 224 YNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAAsasatriFDIPFYFSSNEwhLLLEILA 303
Cdd:MTH00197 73 SNLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP-------LLILAFNSSSF--MGLLICS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558989 304 ILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNdgyasMITYMLFYISMNLGTFacivLFGLRTGTDNIRD 383
Cdd:MTH00197 144 VLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSI-----FMLYYLIYFVIMFMLF----LFLSKNNLSSLNQ 214
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 288558989 384 YAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKIYLFWCGWQAGLYFLVLIGLLTSVLSIYYYLKII 451
Cdd:MTH00197 215 QYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLA 282
|
|
| |
