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Conserved domains on  [gi|1215375878|gb|OXB47776|]
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hypothetical protein B1J92_I06578g [Nakaseomyces glabratus]

Protein Classification

PLP-dependent aminotransferase family protein( domain architecture ID 1903398)

pyridoxal phosphate (PLP)-dependent aminotransferase family protein may catalyze the reversible exchange of an amino group from one molecule with a keto group from another molecule

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ARO8 super family cl43346
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain ...
 1-433 3.69e-55

DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain is part of the Pathway/BioSystem: Lysine biosynthesis


The actual alignment was detected with superfamily member COG1167:

Pssm-ID: 440781 [Multi-domain]  Cd Length: 471  Bit Score: 189.65  E-value: 3.69e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878   1 MSMDQPARINFFKGHPSFRLLPNEEIVEATRQLLtsetrdyddDTRNRHPLTYGPDEGALWVRQQICD-FNNRlfGSDSK 79
Cdd:COG1167   101 LLEAAPGVIDLGSGAPDPDLFPLAALRRALRRAL---------RRLPPALLGYGDPQGLPELREAIARyLARR--GVPAS 169

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878  80 PEFLNLSSGSSYGcLSVLLHTTLPHtnftRQAFII-SPTYFLINDCFIDAGFgsKLTAI--DEEGedsINFEQLLSKLRH 156
Cdd:COG1167   170 PDQILITSGAQQA-LDLALRALLRP----GDTVAVeSPTYPGALAALRAAGL--RLVPVpvDEDG---LDLDALEAALRR 239

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 157 feelygdsnGDVSIIqnpnkptkkvykyvmYCVPTFANPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYStdvhe 236
Cdd:COG1167   240 ---------HRPRAV---------------YVTPSHQNPTGATMSLERRRALLELARRHGVPIIEDDYDSELRYD----- 290

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 237 wPRPQKRLVHIDRAtapddnefGNTISNATFSKIIAPGLRFGYhetI--NDKLAAQLSRGGANVSGGTPSqLNSMIVGTI 314
Cdd:COG1167   291 -GRPPPPLAALDAP--------GRVIYIGSFSKTLAPGLRLGY---LvaPGRLIERLARLKRATDLGTSP-LTQLALAEF 357

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 315 LQNGSMERILGKLRETYRTRSVAMWDSLQKHMPKDTHISSPKGGYFVWVTLPPGYDAKKIGKKLKdEHGVILANGSDFEV 394
Cdd:COG1167   358 LESGHYDRHLRRLRREYRARRDLLLAALARHLPDGLRVTGPPGGLHLWLELPEGVDAEALAAAAL-ARGILVAPGSAFSA 436

                         410       420       430
                  ....*....|....*....|....*....|....*....
gi 1215375878 395 IGDERGWgdrsVRLSISFLETPDIIEGCELWGKVCKEMA 433
Cdd:COG1167   437 DGPPRNG----LRLGFGAPSEEELEEALRRLAELLRELA 471
 
Name Accession Description Interval E-value
ARO8 COG1167
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain ...
 1-433 3.69e-55

DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain is part of the Pathway/BioSystem: Lysine biosynthesis


Pssm-ID: 440781 [Multi-domain]  Cd Length: 471  Bit Score: 189.65  E-value: 3.69e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878   1 MSMDQPARINFFKGHPSFRLLPNEEIVEATRQLLtsetrdyddDTRNRHPLTYGPDEGALWVRQQICD-FNNRlfGSDSK 79
Cdd:COG1167   101 LLEAAPGVIDLGSGAPDPDLFPLAALRRALRRAL---------RRLPPALLGYGDPQGLPELREAIARyLARR--GVPAS 169

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878  80 PEFLNLSSGSSYGcLSVLLHTTLPHtnftRQAFII-SPTYFLINDCFIDAGFgsKLTAI--DEEGedsINFEQLLSKLRH 156
Cdd:COG1167   170 PDQILITSGAQQA-LDLALRALLRP----GDTVAVeSPTYPGALAALRAAGL--RLVPVpvDEDG---LDLDALEAALRR 239

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 157 feelygdsnGDVSIIqnpnkptkkvykyvmYCVPTFANPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYStdvhe 236
Cdd:COG1167   240 ---------HRPRAV---------------YVTPSHQNPTGATMSLERRRALLELARRHGVPIIEDDYDSELRYD----- 290

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 237 wPRPQKRLVHIDRAtapddnefGNTISNATFSKIIAPGLRFGYhetI--NDKLAAQLSRGGANVSGGTPSqLNSMIVGTI 314
Cdd:COG1167   291 -GRPPPPLAALDAP--------GRVIYIGSFSKTLAPGLRLGY---LvaPGRLIERLARLKRATDLGTSP-LTQLALAEF 357

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 315 LQNGSMERILGKLRETYRTRSVAMWDSLQKHMPKDTHISSPKGGYFVWVTLPPGYDAKKIGKKLKdEHGVILANGSDFEV 394
Cdd:COG1167   358 LESGHYDRHLRRLRREYRARRDLLLAALARHLPDGLRVTGPPGGLHLWLELPEGVDAEALAAAAL-ARGILVAPGSAFSA 436

                         410       420       430
                  ....*....|....*....|....*....|....*....
gi 1215375878 395 IGDERGWgdrsVRLSISFLETPDIIEGCELWGKVCKEMA 433
Cdd:COG1167   437 DGPPRNG----LRLGFGAPSEEELEEALRRLAELLRELA 471
AAT_like cd00609
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent ...
 9-423 2.73e-50

Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein.


Pssm-ID: 99734 [Multi-domain]  Cd Length: 350  Bit Score: 173.68  E-value: 2.73e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878   9 INFFKGHPSFRLLPneEIVEATRQLLtsetrdydddtRNRHPLTYGPDEGALWVRQQICDFNNRLFGSDSKPEFLNLSSG 88
Cdd:cd00609     1 IDLSIGEPDFPPPP--EVLEALAAAA-----------LRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNG 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878  89 SSYGcLSVLLHTTLphtNFTRQAFIISPTYFLINDCFIDAGFGSKLTAIDEEGEDSINFEQLLSKLRHfeelygdsNGDV 168
Cdd:cd00609    68 AQEA-LSLLLRALL---NPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTP--------KTKL 135

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 169 SIIQNPNkptkkvykyvmycvptfaNPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYSTDVHewprpqkrlvhiD 248
Cdd:cd00609   136 LYLNNPN------------------NPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPP------------P 185

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 249 RATAPDDNEfgNTISNATFSKIIA-PGLRFGYHeTINDKLAAQLSRGGANVSGGTPSQLNSMIVGTILQNGsmERILGKL 327
Cdd:cd00609   186 ALALLDAYE--RVIVLRSFSKTFGlPGLRIGYL-IAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDG--EEHLEEL 260

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 328 RETYRTRSVAMWDSLQKHMPKDTHIssPKGGYFVWVTLPPGYDAKKIgKKLKDEHGVILANGSDFEvigderGWGDRSVR 407
Cdd:cd00609   261 RERYRRRRDALLEALKELGPLVVVK--PSGGFFLWLDLPEGDDEEFL-ERLLLEAGVVVRPGSAFG------EGGEGFVR 331

                         410
                  ....*....|....*.
gi 1215375878 408 LSISFLEtPDIIEGCE 423
Cdd:cd00609   332 LSFATPE-EELEEALE 346
Aminotran_1_2 pfam00155
Aminotransferase class I and II;
18-423 5.00e-20

Aminotransferase class I and II;


Pssm-ID: 395103 [Multi-domain]  Cd Length: 351  Bit Score: 90.83  E-value: 5.00e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878  18 FRLLPNEEIVEATRQLLtsetrdyDDDTRNRhpltYGPDEGALWVRQQICDFNNRLFGSDSKPE-FLNLSSGSSYGCLSV 96
Cdd:pfam00155  11 YLGDTLPAVAKAEKDAL-------AGGTRNL----YGPTDGHPELREALAKFLGRSPVLKLDREaAVVFGSGAGANIEAL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878  97 LLHTTLPHTNFtrqaFIISPTYFLINDCFIDAGFGSKLTAIDEEGEDSINFEQLLSKLrhfeelygDSNGDVSIIQNPNk 176
Cdd:pfam00155  80 IFLLANPGDAI----LVPAPTYASYIRIARLAGGEVVRYPLYDSNDFHLDFDALEAAL--------KEKPKVVLHTSPH- 146

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 177 ptkkvykyvmycvptfaNPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYSTDVHEwprpqkrlvhidrATAPDDN 256
Cdd:pfam00155 147 -----------------NPTGTVATLEELEKLLDLAKEHNILLLVDEAYAGFVFGSPDAV-------------ATRALLA 196

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 257 EFGNTISNATFSKIIA-PGLRFGYhETINDKLAAQLSRGGANVSGGTPSQLnsmIVGTILQNGSMERI-LGKLRETYRTR 334
Cdd:pfam00155 197 EGPNLLVVGSFSKAFGlAGWRVGY-ILGNAAVISQLRKLARPFYSSTHLQA---AAAAALSDPLLVASeLEEMRQRIKER 272

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 335 SVAMWDSLQKhmpKDTHISSPKGGYFVWVTLPPgYDAKKIGKKLKDEHGVILANGSDFEVIGdergwgdrSVRLSISFLE 414
Cdd:pfam00155 273 RDYLRDGLQA---AGLSVLPSQAGFFLLTGLDP-ETAKELAQVLLEEVGVYVTPGSSPGVPG--------WLRITVAGGT 340


                  ....*....
gi 1215375878 415 TPDIIEGCE 423
Cdd:pfam00155 341 EEELEELLE 349
PRK06348 PRK06348
pyridoxal phosphate-dependent aminotransferase;
194-398 2.02e-09

pyridoxal phosphate-dependent aminotransferase;


Pssm-ID: 180537  Cd Length: 384  Bit Score: 58.96  E-value: 2.02e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 194 NPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYSTDVhewprpqkrlvhIDRATAPDDNEfgNTISNATFSKIIA- 272
Cdd:PRK06348  173 NPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDF------------VPMATLAGMPE--RTITFGSFSKDFAm 238

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 273 PGLRFGY---HETINDklAAQLSRGGANVSGGTPSQLNSMIVgtiLQNgsMERILGKLRETYRTRSVAMWDSLQKhMPKd 349
Cdd:PRK06348  239 TGWRIGYviaPDYIIE--TAKIINEGICFSAPTISQRAAIYA---LKH--RDTIVPLIKEEFQKRLEYAYKRIES-IPN- 309

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1215375878 350 THISSPKGGYFVWVTLP-PGYDAKKIGKKLKDEHGVILANGSDFEVIGDE 398
Cdd:PRK06348  310 LSLHPPKGSIYAFINIKkTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEG 359
tyr_nico_aTase TIGR01265
tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal ...
 15-423 1.38e-05

tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.


Pssm-ID: 188123  Cd Length: 403  Bit Score: 46.95  E-value: 1.38e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878  15 HPSFRllPNEEIVEATRQLLTSEtrDYDddtrnrhplTYGPDEGALWVRQQICDFNNRLFGSDSKPEFLNLSSGSSYG-- 92
Cdd:TIGR01265  44 FGNLR--TDPEAEEAVKDALRSG--KFN---------GYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAie 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878  93 -CLSVLL----HTTLPHTNF----TRQAFiisptyflindcfidAGFGSKLTAIDEEGEDSINFEQLlsklrhfeELYGD 163
Cdd:TIGR01265 111 iCIEALAnpgaNILVPRPGFplydTRAAF---------------SGLEVRLYDLLPEKDWEIDLDGL--------ESLAD 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 164 SNGDVSIIQNPNkptkkvykyvmycvptfaNPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYSTDVHEwprPQKR 243
Cdd:TIGR01265 168 EKTVAIVVINPS------------------NPCGSVFSRDHLQKIAEVAEKLGIPIIADEIYGHMVFGDAPFI---PMAS 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 244 LVHIdratAPddnefgnTISNATFSK-IIAPGLRFG---YHETiNDKLAAQLSRGGANVSGgtpsqlnsMIVG--TILQn 317
Cdd:TIGR01265 227 FASI----VP-------VLSLGGISKrWVVPGWRLGwiiIHDP-HGIFRDTVLQGLKNLLQ--------RILGpaTIVQ- 285

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 318 GSMERILGKLRETYRTRSVAMWDS----LQKHMPKDTHIS--SPKGGYFVWVTL-----PPGYDAKKIGKKLKDEHGVIL 386
Cdd:TIGR01265 286 GALPDILENTPQEFFDGKISVLKSnaelCYEELKDIPGLVcpKPEGAMYLMVKLelelfPEIKDDVDFCEKLAREESVIC 365

                         410       420       430
                  ....*....|....*....|....*....|....*..
gi 1215375878 387 ANGSDFEVigdeRGWgdrsVRLSISfLETPDIIEGCE 423
Cdd:TIGR01265 366 LPGSAFGL----PNW----VRITIT-VPESMLEEACS 393
 
Name Accession Description Interval E-value
ARO8 COG1167
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain ...
 1-433 3.69e-55

DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain is part of the Pathway/BioSystem: Lysine biosynthesis


Pssm-ID: 440781 [Multi-domain]  Cd Length: 471  Bit Score: 189.65  E-value: 3.69e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878   1 MSMDQPARINFFKGHPSFRLLPNEEIVEATRQLLtsetrdyddDTRNRHPLTYGPDEGALWVRQQICD-FNNRlfGSDSK 79
Cdd:COG1167   101 LLEAAPGVIDLGSGAPDPDLFPLAALRRALRRAL---------RRLPPALLGYGDPQGLPELREAIARyLARR--GVPAS 169

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878  80 PEFLNLSSGSSYGcLSVLLHTTLPHtnftRQAFII-SPTYFLINDCFIDAGFgsKLTAI--DEEGedsINFEQLLSKLRH 156
Cdd:COG1167   170 PDQILITSGAQQA-LDLALRALLRP----GDTVAVeSPTYPGALAALRAAGL--RLVPVpvDEDG---LDLDALEAALRR 239

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 157 feelygdsnGDVSIIqnpnkptkkvykyvmYCVPTFANPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYStdvhe 236
Cdd:COG1167   240 ---------HRPRAV---------------YVTPSHQNPTGATMSLERRRALLELARRHGVPIIEDDYDSELRYD----- 290

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 237 wPRPQKRLVHIDRAtapddnefGNTISNATFSKIIAPGLRFGYhetI--NDKLAAQLSRGGANVSGGTPSqLNSMIVGTI 314
Cdd:COG1167   291 -GRPPPPLAALDAP--------GRVIYIGSFSKTLAPGLRLGY---LvaPGRLIERLARLKRATDLGTSP-LTQLALAEF 357

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 315 LQNGSMERILGKLRETYRTRSVAMWDSLQKHMPKDTHISSPKGGYFVWVTLPPGYDAKKIGKKLKdEHGVILANGSDFEV 394
Cdd:COG1167   358 LESGHYDRHLRRLRREYRARRDLLLAALARHLPDGLRVTGPPGGLHLWLELPEGVDAEALAAAAL-ARGILVAPGSAFSA 436

                         410       420       430
                  ....*....|....*....|....*....|....*....
gi 1215375878 395 IGDERGWgdrsVRLSISFLETPDIIEGCELWGKVCKEMA 433
Cdd:COG1167   437 DGPPRNG----LRLGFGAPSEEELEEALRRLAELLRELA 471
AAT_like cd00609
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent ...
 9-423 2.73e-50

Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein.


Pssm-ID: 99734 [Multi-domain]  Cd Length: 350  Bit Score: 173.68  E-value: 2.73e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878   9 INFFKGHPSFRLLPneEIVEATRQLLtsetrdydddtRNRHPLTYGPDEGALWVRQQICDFNNRLFGSDSKPEFLNLSSG 88
Cdd:cd00609     1 IDLSIGEPDFPPPP--EVLEALAAAA-----------LRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNG 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878  89 SSYGcLSVLLHTTLphtNFTRQAFIISPTYFLINDCFIDAGFGSKLTAIDEEGEDSINFEQLLSKLRHfeelygdsNGDV 168
Cdd:cd00609    68 AQEA-LSLLLRALL---NPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTP--------KTKL 135

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 169 SIIQNPNkptkkvykyvmycvptfaNPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYSTDVHewprpqkrlvhiD 248
Cdd:cd00609   136 LYLNNPN------------------NPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPP------------P 185

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 249 RATAPDDNEfgNTISNATFSKIIA-PGLRFGYHeTINDKLAAQLSRGGANVSGGTPSQLNSMIVGTILQNGsmERILGKL 327
Cdd:cd00609   186 ALALLDAYE--RVIVLRSFSKTFGlPGLRIGYL-IAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDG--EEHLEEL 260

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 328 RETYRTRSVAMWDSLQKHMPKDTHIssPKGGYFVWVTLPPGYDAKKIgKKLKDEHGVILANGSDFEvigderGWGDRSVR 407
Cdd:cd00609   261 RERYRRRRDALLEALKELGPLVVVK--PSGGFFLWLDLPEGDDEEFL-ERLLLEAGVVVRPGSAFG------EGGEGFVR 331

                         410
                  ....*....|....*.
gi 1215375878 408 LSISFLEtPDIIEGCE 423
Cdd:cd00609   332 LSFATPE-EELEEALE 346
AspB COG0436
Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; ...
 14-431 1.15e-22

Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; Aspartate/methionine/tyrosine aminotransferase is part of the Pathway/BioSystem: Isoleucine, leucine, valine biosynthesis


Pssm-ID: 440205 [Multi-domain]  Cd Length: 387  Bit Score: 99.05  E-value: 1.15e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878  14 GHPSFRllPNEEIVEATRQLLTsetrdyDDDTRnrhpltYGPDEGALWVRQQICDFNNRLFGSDSKPEFLNLSSGSSYGc 93
Cdd:COG0436    38 GEPDFP--TPDHIREAAIEALD------DGVTG------YTPSAGIPELREAIAAYYKRRYGVDLDPDEILVTNGAKEA- 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878  94 LSVLLHTTLphtNFTRQAFIISPTYFLINDCFIDAGFGSKLTAIDEEGEDSINFEQLLSKLrhfeelygdsngdvsiiqn 173
Cdd:COG0436   103 LALALLALL---NPGDEVLVPDPGYPSYRAAVRLAGGKPVPVPLDEENGFLPDPEALEAAI------------------- 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 174 pnkpTKKVyKYVMYCVPtfANPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYSTDVHewprpqkrlVHIdrATAP 253
Cdd:COG0436   161 ----TPRT-KAIVLNSP--NNPTGAVYSREELEALAELAREHDLLVISDEIYEELVYDGAEH---------VSI--LSLP 222

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 254 DDNEfgNTISNATFSKIIA-PGLRFGYhETINDKLAAQLSRGGANVSGG--TPSQlnsMIVGTILQNGsmERILGKLRET 330
Cdd:COG0436   223 GLKD--RTIVINSFSKSYAmTGWRIGY-AVGPPELIAALLKLQSNLTSCapTPAQ---YAAAAALEGP--QDYVEEMRAE 294

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 331 YRTRSVAMWDSLQKHmpkDTHISSPKGGYFVWVTLPPGY-DAKKIGKKLKDEHGVILANGSDFeviGDErgwGDRSVRls 409
Cdd:COG0436   295 YRRRRDLLVEGLNEI---GLSVVKPEGAFYLFADVPELGlDSEEFAERLLEEAGVAVVPGSAF---GPA---GEGYVR-- 363

                         410       420
                  ....*....|....*....|...
gi 1215375878 410 ISFL-ETPDIIEGCELWGKVCKE 431
Cdd:COG0436   364 ISYAtSEERLEEALERLARFLER 386
Aminotran_1_2 pfam00155
Aminotransferase class I and II;
18-423 5.00e-20

Aminotransferase class I and II;


Pssm-ID: 395103 [Multi-domain]  Cd Length: 351  Bit Score: 90.83  E-value: 5.00e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878  18 FRLLPNEEIVEATRQLLtsetrdyDDDTRNRhpltYGPDEGALWVRQQICDFNNRLFGSDSKPE-FLNLSSGSSYGCLSV 96
Cdd:pfam00155  11 YLGDTLPAVAKAEKDAL-------AGGTRNL----YGPTDGHPELREALAKFLGRSPVLKLDREaAVVFGSGAGANIEAL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878  97 LLHTTLPHTNFtrqaFIISPTYFLINDCFIDAGFGSKLTAIDEEGEDSINFEQLLSKLrhfeelygDSNGDVSIIQNPNk 176
Cdd:pfam00155  80 IFLLANPGDAI----LVPAPTYASYIRIARLAGGEVVRYPLYDSNDFHLDFDALEAAL--------KEKPKVVLHTSPH- 146

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 177 ptkkvykyvmycvptfaNPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYSTDVHEwprpqkrlvhidrATAPDDN 256
Cdd:pfam00155 147 -----------------NPTGTVATLEELEKLLDLAKEHNILLLVDEAYAGFVFGSPDAV-------------ATRALLA 196

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 257 EFGNTISNATFSKIIA-PGLRFGYhETINDKLAAQLSRGGANVSGGTPSQLnsmIVGTILQNGSMERI-LGKLRETYRTR 334
Cdd:pfam00155 197 EGPNLLVVGSFSKAFGlAGWRVGY-ILGNAAVISQLRKLARPFYSSTHLQA---AAAAALSDPLLVASeLEEMRQRIKER 272

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 335 SVAMWDSLQKhmpKDTHISSPKGGYFVWVTLPPgYDAKKIGKKLKDEHGVILANGSDFEVIGdergwgdrSVRLSISFLE 414
Cdd:pfam00155 273 RDYLRDGLQA---AGLSVLPSQAGFFLLTGLDP-ETAKELAQVLLEEVGVYVTPGSSPGVPG--------WLRITVAGGT 340


                  ....*....
gi 1215375878 415 TPDIIEGCE 423
Cdd:pfam00155 341 EEELEELLE 349
PRK06348 PRK06348
pyridoxal phosphate-dependent aminotransferase;
194-398 2.02e-09

pyridoxal phosphate-dependent aminotransferase;


Pssm-ID: 180537  Cd Length: 384  Bit Score: 58.96  E-value: 2.02e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 194 NPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYSTDVhewprpqkrlvhIDRATAPDDNEfgNTISNATFSKIIA- 272
Cdd:PRK06348  173 NPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDF------------VPMATLAGMPE--RTITFGSFSKDFAm 238

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 273 PGLRFGY---HETINDklAAQLSRGGANVSGGTPSQLNSMIVgtiLQNgsMERILGKLRETYRTRSVAMWDSLQKhMPKd 349
Cdd:PRK06348  239 TGWRIGYviaPDYIIE--TAKIINEGICFSAPTISQRAAIYA---LKH--RDTIVPLIKEEFQKRLEYAYKRIES-IPN- 309

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1215375878 350 THISSPKGGYFVWVTLP-PGYDAKKIGKKLKDEHGVILANGSDFEVIGDE 398
Cdd:PRK06348  310 LSLHPPKGSIYAFINIKkTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEG 359
MalY COG1168
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor ...
 194-408 7.05e-08

Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism, General function prediction only];


Pssm-ID: 440782  Cd Length: 387  Bit Score: 54.33  E-value: 7.05e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 194 NPSGKSYSLETRTKLIEIARRYDMLIICDDVY-DLLdystdvhewpRPQKRlvHIDRATAPDDNEfGNTIsnaTF---SK 269
Cdd:COG1168   172 NPTGRVWTREELERLAELCERHDVLVISDEIHaDLV----------LPGHK--HTPFASLSEEAA-DRTI---TLtspSK 235

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 270 ---IiaPGLRFGYHETINDKLAAQLSRGGANVSGGTPSQLNsmIVGTI--LQNGS--MERILGKLRETYRtrsvAMWDSL 342
Cdd:COG1168   236 tfnL--AGLKASYAIIPNPALRARFARALEGLGLPSPNVLG--LVATEaaYREGEewLDELLAYLRGNRD----LLAEFL 307

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1215375878 343 QKHMPKdTHISSPKGGYFVWVTLPP-GYDAKKIGKKLKDEHGVILANGSDFeviGDErgwGDRSVRL 408
Cdd:COG1168   308 AEHLPG-VKVTPPEATYLAWLDCRAlGLDDEELAEFLLEKAGVALSDGATF---GEG---GEGFVRL 367
PRK05764 PRK05764
aspartate aminotransferase; Provisional
 193-432 4.38e-07

aspartate aminotransferase; Provisional


Pssm-ID: 235596  Cd Length: 393  Bit Score: 51.66  E-value: 4.38e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 193 ANPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYStDVHewprpqkrlvHIDRATAPDDnEFGNTI-SNAtFSKII 271
Cdd:PRK05764  174 SNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYD-GAE----------FTSIASLSPE-LRDRTItVNG-FSKAY 240

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 272 A-PGLRFGY----HETIN--DKLAAQlsrggaNVSGgtpsqlnsmiVGTILQNGSMERILG------KLRETYRTRSVAM 338
Cdd:PRK05764  241 AmTGWRLGYaagpKELIKamSKLQSH------STSN----------PTSIAQYAAVAALNGpqdeveEMRQAFEERRDLM 304

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 339 WDSLQKHmpKDTHISSPKGGYFVWV-----TLPPGYDAKKIGKKLKDEHGVILANGSDFevigDERGWgdrsVRLSISfL 413
Cdd:PRK05764  305 VDGLNEI--PGLECPKPEGAFYVFPnvsklLGKSITDSLEFAEALLEEAGVAVVPGIAF----GAPGY----VRLSYA-T 373

                         250
                  ....*....|....*....
gi 1215375878 414 ETPDIIEGCELWGKVCKEM 432
Cdd:PRK05764  374 SLEDLEEGLERIERFLESL 392
PRK08363 PRK08363
alanine aminotransferase; Validated
 14-420 8.26e-07

alanine aminotransferase; Validated


Pssm-ID: 181402  Cd Length: 398  Bit Score: 50.96  E-value: 8.26e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878  14 GHP-SFRLLPNEEIVEAtrqlltsetrdYDDDTRNRHPLtYGPDEGALWVRQQICDFNNRLFGSDSKPEFLNLSSGSSYG 92
Cdd:PRK08363   38 GDPvKFDFQPPEHMKEA-----------YCRAIKEGHNY-YGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEA 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878  93 cLSVLLHTTLphtNFTRQAFIISPTYFL-INDCFIDAGFGSKLTAIDEEGEDSiNFEQLLSKLRhfeelygDSNGDVSII 171
Cdd:PRK08363  106 -LQLIFGALL---DPGDEILIPGPSYPPyTGLVKFYGGVPVEYRTIEEEGWQP-DIDDIRKKIT-------EKTKAIAVI 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 172 qNPNkptkkvykyvmycvptfaNPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYSTDvhewprpqkrlvHIDRAT 251
Cdd:PRK08363  174 -NPN------------------NPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGK------------HVSPGS 222

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 252 APDDNefgNTISNATFSKI-IAPGLRFGYHETIN--DKLAA------QLSRggANVSGGTPSQLnSMIVGTILQNGSMER 322
Cdd:PRK08363  223 LTKDV---PVIVMNGLSKVyFATGWRLGYIYFVDpeGKLAEvreaidKLAR--IRLCPNTPAQF-AAIAGLTGPMDYLEE 296

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 323 ILGKLRETYrtrsvamwDSLQKHMPKDTHIS--SPKGGYFVW--VTLPPGYDAKKIGKKLKDEHGVILANGSDFeviGDE 398
Cdd:PRK08363  297 YMKKLKERR--------DYIYKRLNEIPGISttKPQGAFYIFprIEEGPWKDDKEFVLDVLHEAHVLFVHGSGF---GEY 365

                         410       420
                  ....*....|....*....|..
gi 1215375878 399 RGWGDRSVrlsisFLETPDIIE 420
Cdd:PRK08363  366 GAGHFRLV-----FLPPVEILE 382
PRK06855 PRK06855
pyridoxal phosphate-dependent aminotransferase;
194-231 1.27e-06

pyridoxal phosphate-dependent aminotransferase;


Pssm-ID: 180734  Cd Length: 433  Bit Score: 50.33  E-value: 1.27e-06
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1215375878 194 NPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYS 231
Cdd:PRK06855  182 NPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYN 219
PRK09148 PRK09148
LL-diaminopimelate aminotransferase;
188-398 7.73e-06

LL-diaminopimelate aminotransferase;


Pssm-ID: 181674 [Multi-domain]  Cd Length: 405  Bit Score: 47.75  E-value: 7.73e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 188 CVPTfaNPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYSTDvhewPRPQKRLV--HIDRATapddnEFgnTISNA 265
Cdd:PRK09148  172 NYPS--NPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGN----PPPSVLQVpgAKDVTV-----EF--TSMSK 238

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 266 TFSkiiAPGLRFGYhETINDKLAAQLSRGGANVSGG--TPSQlnsmIVGTILQNGSMErILGKLRETYRTRSVAMWDSLQ 343
Cdd:PRK09148  239 TFS---MAGWRMGF-AVGNERLIAALTRVKSYLDYGafTPIQ----VAATAALNGPQD-CIAEMRELYKKRRDVLVESFG 309

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 344 KhmpKDTHISSPKGGYFVWVTLPPGYdaKKIG-----KKLKDEHGVILANGSDFEVIGDE 398
Cdd:PRK09148  310 R---AGWDIPPPAASMFAWAPIPEAF--RHLGslefsKLLVEKADVAVAPGVGFGEHGDG 364
tyr_nico_aTase TIGR01265
tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal ...
 15-423 1.38e-05

tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.


Pssm-ID: 188123  Cd Length: 403  Bit Score: 46.95  E-value: 1.38e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878  15 HPSFRllPNEEIVEATRQLLTSEtrDYDddtrnrhplTYGPDEGALWVRQQICDFNNRLFGSDSKPEFLNLSSGSSYG-- 92
Cdd:TIGR01265  44 FGNLR--TDPEAEEAVKDALRSG--KFN---------GYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAie 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878  93 -CLSVLL----HTTLPHTNF----TRQAFiisptyflindcfidAGFGSKLTAIDEEGEDSINFEQLlsklrhfeELYGD 163
Cdd:TIGR01265 111 iCIEALAnpgaNILVPRPGFplydTRAAF---------------SGLEVRLYDLLPEKDWEIDLDGL--------ESLAD 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 164 SNGDVSIIQNPNkptkkvykyvmycvptfaNPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYSTDVHEwprPQKR 243
Cdd:TIGR01265 168 EKTVAIVVINPS------------------NPCGSVFSRDHLQKIAEVAEKLGIPIIADEIYGHMVFGDAPFI---PMAS 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 244 LVHIdratAPddnefgnTISNATFSK-IIAPGLRFG---YHETiNDKLAAQLSRGGANVSGgtpsqlnsMIVG--TILQn 317
Cdd:TIGR01265 227 FASI----VP-------VLSLGGISKrWVVPGWRLGwiiIHDP-HGIFRDTVLQGLKNLLQ--------RILGpaTIVQ- 285

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 318 GSMERILGKLRETYRTRSVAMWDS----LQKHMPKDTHIS--SPKGGYFVWVTL-----PPGYDAKKIGKKLKDEHGVIL 386
Cdd:TIGR01265 286 GALPDILENTPQEFFDGKISVLKSnaelCYEELKDIPGLVcpKPEGAMYLMVKLelelfPEIKDDVDFCEKLAREESVIC 365

                         410       420       430
                  ....*....|....*....|....*....|....*..
gi 1215375878 387 ANGSDFEVigdeRGWgdrsVRLSISfLETPDIIEGCE 423
Cdd:TIGR01265 366 LPGSAFGL----PNW----VRITIT-VPESMLEEACS 393
PLN02187 PLN02187
rooty/superroot1
 52-226 2.45e-05

rooty/superroot1


Pssm-ID: 215119 [Multi-domain]  Cd Length: 462  Bit Score: 46.26  E-value: 2.45e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878  52 TYGPDEGALWVRQQICDFNNRLFGSDSKPEFLNLSSGSSYGCLSVLLHTTLPHTNFtrqaFIISPTYFLINDCFIDAGFG 131
Cdd:PLN02187  103 SYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANI----LLPRPGFPHYDARAAYSGLE 178

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 132 SKLTAIDEEGEDSINFEQLlsklrhfeELYGDSNGDVSIIQNPNkptkkvykyvmycvptfaNPSGKSYSLETRTKLIEI 211
Cdd:PLN02187  179 VRKFDLLPEKEWEIDLEGI--------EAIADENTVAMVVINPN------------------NPCGNVYSHDHLKKVAET 232

                         170
                  ....*....|....*
gi 1215375878 212 ARRYDMLIICDDVYD 226
Cdd:PLN02187  233 ARKLGIMVISDEVYD 247
PRK07681 PRK07681
LL-diaminopimelate aminotransferase;
207-392 2.96e-05

LL-diaminopimelate aminotransferase;


Pssm-ID: 181081  Cd Length: 399  Bit Score: 45.95  E-value: 2.96e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 207 KLIEIARRYDMLIICDDVYDLLDYSTdvhewprpQKRLVHIdraTAPDDNEFGNTISNATFSKIIApGLRFGY---HETI 283
Cdd:PRK07681  190 EVIAFAKKHNIIVVHDFAYAEFYFDG--------NKPISFL---SVPGAKEVGVEINSLSKSYSLA-GSRIGYmigNEEI 257

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 284 NDKLAAQLSrggaNVSGGT--PSQLNSMIVgtiLQNGSmeRILGKLRETYRTRSVAMWDSLQKHmpkDTHISSPKGGYFV 361
Cdd:PRK07681  258 VRALTQFKS----NTDYGVflPIQKAACAA---LRNGA--AFCEKNRGIYQERRDTLVDGFRTF---GWNVDKPAGSMFV 325

                         170       180       190
                  ....*....|....*....|....*....|.
gi 1215375878 362 WVTLPPGYDAKKIGKKLKDEHGVILANGSDF 392
Cdd:PRK07681  326 WAEIPKGWTSLSFAYALMDRANVVVTPGHAF 356
PRK07309 PRK07309
pyridoxal phosphate-dependent aminotransferase;
167-235 3.09e-05

pyridoxal phosphate-dependent aminotransferase;


Pssm-ID: 235985  Cd Length: 391  Bit Score: 45.87  E-value: 3.09e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1215375878 167 DVSIIQNPNKptkkvYKYVMYCVPTfaNPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYSTDVH 235
Cdd:PRK07309  157 EKAILEQGDK-----LKAVILNYPA--NPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPH 218
PLN00143 PLN00143
tyrosine/nicotianamine aminotransferase; Provisional
 4-365 3.23e-05

tyrosine/nicotianamine aminotransferase; Provisional


Pssm-ID: 165711 [Multi-domain]  Cd Length: 409  Bit Score: 45.77  E-value: 3.23e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878   4 DQPARINFFKGHPS----FRLLPNEE--IVEATRQLLTSetrdydddtrnrhplTYGPDEGALWVRQQICDFNNRLFGSD 77
Cdd:PLN00143   30 DHRLAISFGFGDPScfecFRTTNIAEdaIVEAVRSAKFN---------------SYAPTGGILPARRAIADYLSNDLPYQ 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878  78 SKPEFLNLSSGSSYGCLSVLLHTTLPHTN--FTRQAFIISPTYFLIN-------DCFIDAGFGSKLTAIdeegedsinfe 148
Cdd:PLN00143   95 LSPDDVYLTLGCKHAAEIIIKVLARPEANilLPRPGFPDVETYAIFHhleirhfDLLPEKGWEVDLDAV----------- 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 149 qllsklrhfeELYGDSNGDVSIIQNPnkptkkvykyvmycvptfANPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLL 228
Cdd:PLN00143  164 ----------EAIADENTIAMVIINP------------------GNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHI 215

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 229 DYSTdvhewprpqKRLVHIdratapddNEFGNTISNATFSKI----IAPGLRFGYHETINDKLAAQLSrggaNVSGGTPS 304
Cdd:PLN00143  216 VFGS---------KPFVPM--------GLFASIVPVITLGSIskrwMIPGWGLGWLVTCDPSGLLQIC----EIADSIKK 274

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1215375878 305 QLNSMIVGTILQNGSMERILGKLRETYRTRSVAM--------WDSLqKHMPKDTHISSPKGGYFVWVTL 365
Cdd:PLN00143  275 ALNPAPFPPTFIQAAIPEILEKTTEDFFSKTINIlraalafcYDKL-KEIPCIMCPQKAEGAFFALVKL 342
PLN00145 PLN00145
tyrosine/nicotianamine aminotransferase; Provisional
 194-390 3.61e-05

tyrosine/nicotianamine aminotransferase; Provisional


Pssm-ID: 215074 [Multi-domain]  Cd Length: 430  Bit Score: 45.92  E-value: 3.61e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 194 NPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYStdvhewprpQKRLVHIdratapddNEFGNTISNATFSKI--- 270
Cdd:PLN00145  201 NPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFG---------SKPFVPM--------GVFGEVAPVLTLGSIskr 263

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 271 -IAPGLRFGYHET------INDKLAAQLSRGGANVSGGTPSQLNSMIvGTILQNGSME---RILGKLRETyrtrSVAMWD 340
Cdd:PLN00145  264 wVVPGWRLGWIATcdpngiLKETKVVDSIRNYLNISTDPATFVQGAI-PQIIANTKEEfftKTLGLLKET----ADICYE 338

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1215375878 341 SLqKHMPKDTHISSPKGGYFVWVTLPPGY-----DAKKIGKKLKDEHGVILANGS 390
Cdd:PLN00145  339 KI-KEIKCITCPHKPEGSMFVMVKLDLSClsgikDDMDFCCKLAKEESVVVLPGS 392
PRK09265 PRK09265
aminotransferase AlaT; Validated
 194-235 1.09e-04

aminotransferase AlaT; Validated


Pssm-ID: 181738  Cd Length: 404  Bit Score: 44.42  E-value: 1.09e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1215375878 194 NPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYSTDVH 235
Cdd:PRK09265  179 NPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVH 220
PRK08361 PRK08361
aspartate aminotransferase; Provisional
 194-409 1.25e-04

aspartate aminotransferase; Provisional


Pssm-ID: 236248 [Multi-domain]  Cd Length: 391  Bit Score: 44.10  E-value: 1.25e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 194 NPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYSTDVHewpRPQKRLvhidratAPDdnefgNTISNATFSKIIA- 272
Cdd:PRK08361  177 NPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKH---YPMIKY-------APD-----NTILANSFSKTFAm 241

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 273 PGLRFGY----HETINDKLAAQlsrggANVSGGTPSQLNsmIVG-TILQNGSMERILGKLRETYRTRSVAMWDSLQKhMP 347
Cdd:PRK08361  242 TGWRLGFviapEQVIKDMIKLH-----AYIIGNVASFVQ--IAGiEALRSKESWKAVEEMRKEYNERRKLVLKRLKE-MP 313

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1215375878 348 kdtHIS--SPKGGYFVWVTLPP-GYDAKKIGKKLKDEHGVILANGSDFEVIGDerGWgdrsVRLS 409
Cdd:PRK08361  314 ---HIKvfEPKGAFYVFANIDEtGMSSEDFAEWLLEKARVVVIPGTAFGKAGE--GY----IRIS 369
PRK15481 PRK15481
transcriptional regulatory protein PtsJ; Provisional
 194-418 1.26e-04

transcriptional regulatory protein PtsJ; Provisional


Pssm-ID: 185378 [Multi-domain]  Cd Length: 431  Bit Score: 44.27  E-value: 1.26e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 194 NPSGKSYSlETRTKLIE--IARRYDMLIICDDVYDLLDYSTDVHEWPRPQKRLVHIdratapddnefgntisnATFSKII 271
Cdd:PRK15481  223 NPTGCSLS-ARRAAALRnlLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALI-----------------RSVSKAL 284

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 272 APGLRFGY---HETINDKLAAQLSRGGANVSggtpsQLNSMIVGTILQNGSMERILGKLRETYRTRSVAMWDSLQKHmpk 348
Cdd:PRK15481  285 GPDLRLAFvasDSATSARLRLRLNSGTQWVS-----HLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY--- 356

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 349 DTHISSPKGGYFVWVTLPPgyDAKKIGKKLKdEHGVILANGSDFEVIGDERGwgdrsVRLSISFLETPDI 418
Cdd:PRK15481  357 GIAIPSPGDGLNLWLPLDT--DSQATALTLA-KSGWLVREGEAFGVSAPSHG-----LRITLSTLNDAEI 418
PRK13355 PRK13355
bifunctional HTH-domain containing protein/aminotransferase; Provisional
 194-279 1.88e-04

bifunctional HTH-domain containing protein/aminotransferase; Provisional


Pssm-ID: 237361 [Multi-domain]  Cd Length: 517  Bit Score: 43.57  E-value: 1.88e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 194 NPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYSTdvhewprpqkrLVHIDRAT-APDdnEFGNTISNATFSKIIA 272
Cdd:PRK13355  292 NPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDG-----------LEHTSIASlAPD--LFCVTFSGLSKSHMIA 358


                  ....*..
gi 1215375878 273 pGLRFGY 279
Cdd:PRK13355  359 -GYRIGW 364
PRK09276 PRK09276
LL-diaminopimelate aminotransferase; Provisional
 194-392 2.70e-04

LL-diaminopimelate aminotransferase; Provisional


Pssm-ID: 181749  Cd Length: 385  Bit Score: 42.98  E-value: 2.70e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 194 NPSGKSYSLETRTKLIEIARRYDmLIICDDvydlLDYSTDVHEWPRPQKRLvhidraTAPDDNEFG---NTIS---NATf 267
Cdd:PRK09276  177 NPTGAVADLEFFEEVVDFAKKYD-IIVCHD----AAYSEIAYDGYKPPSFL------EVPGAKDVGiefHSLSktyNMT- 244

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 268 skiiapGLRFGYhETINDKLAAQLSRGGANVSGGTPSQLNSMivGTILQNGSmERILGKLRETYRTRSVAMWDSLQKhmp 347
Cdd:PRK09276  245 ------GWRIGF-AVGNADLIAGLGKVKSNVDSGVFQAIQEA--GIAALNGP-QEVVEELRKIYQERRDILVEGLRK--- 311

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1215375878 348 KDTHISSPKGGYFVWVTLPPGYDAKKIGKKLKDEHGVILANGSDF 392
Cdd:PRK09276  312 LGLEVEPPKATFYVWAPVPKGYTSAEFATLLLDKAGVVVTPGNGF 356
PRK07324 PRK07324
transaminase; Validated
 186-399 3.32e-04

transaminase; Validated


Pssm-ID: 235989  Cd Length: 373  Bit Score: 42.62  E-value: 3.32e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 186 MYCVPTFANPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYSTDVhewprpqkrlvhidrATAPDDNEFGntISNA 265
Cdd:PRK07324  156 LICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGST---------------PSIADLYEKG--ISTN 218

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1215375878 266 TFSKIIA-PGLRFGYHETiNDKLAAQLS--RGGANVSGGtpsQLNSMIVGTILQNgsMERILGKLRETYRTrSVAMWDSL 342
Cdd:PRK07324  219 SMSKTYSlPGIRVGWIAA-NEEVIDILRkyRDYTMICAG---VFDDMLASLALEH--RDAILERNRKIVRT-NLAILDEW 291

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1215375878 343 QKHMPKDTHIsSPKGG--YFVWVTLPpgYDAKKIGKKLKDEHGVILANGSDFEVIGDER 399
Cdd:PRK07324  292 VAKEPRVSYV-KPKAVstSFVKLDVD--MPSEDFCLKLLKETGVLLVPGNRFDLEGHVR 347
PRK07568 PRK07568
pyridoxal phosphate-dependent aminotransferase;
183-225 7.59e-04

pyridoxal phosphate-dependent aminotransferase;


Pssm-ID: 181036  Cd Length: 397  Bit Score: 41.38  E-value: 7.59e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1215375878 183 KYVMYCVPtfANPSGKSYSLETRTKLIEIARRYDMLIICDDVY 225
Cdd:PRK07568  164 KAILISNP--GNPTGVVYTKEELEMLAEIAKKHDLFLISDEVY 204
PRK07777 PRK07777
putative succinyldiaminopimelate transaminase DapC;
194-268 3.39e-03

putative succinyldiaminopimelate transaminase DapC;


Pssm-ID: 236095 [Multi-domain]  Cd Length: 387  Bit Score: 39.64  E-value: 3.39e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1215375878 194 NPSGKSYSLETRTKLIEIARRYDMLIICDDVYDLLDYstDVHEwprpqkrlvHIDRATAPDDNEFGNTISNA--TFS 268
Cdd:PRK07777  170 NPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVF--DGAR---------HLPLATLPGMRERTVTISSAakTFN 235
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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