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Conserved domains on  [gi|1071575466|gb|OEP36886|]
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phosphoribosylformylglycinamidine synthase II [Listeria monocytogenes]

Protein Classification

phosphoribosylformylglycinamidine synthase subunit PurL( domain architecture ID 11479458)

phosphoribosylformylglycinamidine synthase subunit PurL is part of the enzyme complex that catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate; involved in the biosynthetic pathway of purines

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK01213 PRK01213
phosphoribosylformylglycinamidine synthase subunit PurL;
10-739 0e+00

phosphoribosylformylglycinamidine synthase subunit PurL;


:

Pssm-ID: 234921 [Multi-domain]  Cd Length: 724  Bit Score: 1295.07  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  10 EIKEQRIYQEMGLTDSEYDLVCSILGREPNYTETGLFSVMWSEHCSYKNSKPVLRKFPTEGKQVLQGPGEGAGIVDIGDG 89
Cdd:PRK01213    1 TPDTEELYAEMGLTDDEYERIREILGREPNFTELGMFSVMWSEHCSYKSSKPLLRKFPTKGPRVLQGPGENAGVVDIGDG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  90 LGVAFKVESHNHPSYVEPYQGAATGVGGIIRDVFSMGARPIAMLNSLRFGELDTPHAKYLVSEVVAGIAGYGNSIGIPTV 169
Cdd:PRK01213   81 QAVVFKIESHNHPSAVEPYQGAATGVGGILRDIFSMGARPIALLDSLRFGELDHPKTRYLLEGVVAGIGGYGNCIGVPTV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 170 GGEIQFDPCYTKNPLVNAMCVGLIEAKDIQKGQAKGIGNPVMYVGAKTGRDGIHGATFASVEFSEEGEQQRSAVQVGDPF 249
Cdd:PRK01213  161 GGEVYFDESYNGNPLVNAMCVGLVRHDDIVLAKASGVGNPVVYVGAKTGRDGIGGASFASAELSEESEEKRPAVQVGDPF 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 250 MEKLLLEACLDVIRdhSDILVGIQDMGAAGLVSSSSEMASKAGAGLELIMDDVPQRELHMTPYEMLLSESQERMLLCVKK 329
Cdd:PRK01213  241 MEKLLIEACLELIK--TGLVVGIQDMGAAGLTCSSSEMAAKGGLGIELDLDKVPLREEGMTPYEIMLSESQERMLLVVKP 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 330 GHVEEIQALFERYGLEAVVIGQVTDDKMYKIIHHGEVVANVPVDALAEDAPVYHKPSKEPARYQAFQeeeafvPVIDDVV 409
Cdd:PRK01213  319 GKEEEVLAIFEKWDLDAAVIGEVTDDGRLRVYHHGEVVADVPAEALADEAPVYDRPYKEPAYLDELQ------ADPEDLK 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 410 GVWKELLAQPTIASKRHIYEQYDYQVRTDTAVVPGSDAAIVRVRGTEKAIAMTTDCNSRYLYLDPEVGGAIAVAEAARNI 489
Cdd:PRK01213  393 EALLKLLSSPNIASKEWVYEQYDHEVQTNTVVKPGGDAAVLRIRGGGKGLALTTDCNPRYVYLDPYEGAKLAVAEAARNL 472
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 490 VCSGGKPLAITDGLNFGNPEKPEIFWEIEKAADGISAACLELDTPVISGNVSLYNETDGTGIYPTPVIGMVGLVEDLAHI 569
Cdd:PRK01213  473 AAVGATPLAITDCLNFGNPEKPEVMWQFVEAVRGLADACRALGTPVVGGNVSLYNETGGTAIYPTPVIGMVGLIDDVSKR 552
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 570 TTQDFKASGDVIFLIGETKAEYSGSELQKIQQGKISGRAPELDLVTEKKYQQLLLTAIQEGLVASSHDLAEGGFGVALAE 649
Cdd:PRK01213  553 TTSGFKKEGDLIYLLGETKDELGGSEYLKVIHGHVGGRPPKVDLEAEKRLQELVREAIREGLVTSAHDVSEGGLAVALAE 632
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 650 ATFKAGLGADVEVPFALS---QLFSESQSRFLVSVKPENEAAFAQLME--LEKVYRLGVVTaDETIRVKHKEDLVtvkTT 724
Cdd:PRK01213  633 MAIAGGLGAEVDLSDGLRpdaLLFSESQGRYVVSVPPENEEAFEALAEaaGVPATRIGVVG-GDALKVKGNDTES---LE 708
                         730
                  ....*....|....*
gi 1071575466 725 ELRSIWEGAIPCLLK 739
Cdd:PRK01213  709 ELREAWEGALPRLLG 723
 
Name Accession Description Interval E-value
PRK01213 PRK01213
phosphoribosylformylglycinamidine synthase subunit PurL;
10-739 0e+00

phosphoribosylformylglycinamidine synthase subunit PurL;


Pssm-ID: 234921 [Multi-domain]  Cd Length: 724  Bit Score: 1295.07  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  10 EIKEQRIYQEMGLTDSEYDLVCSILGREPNYTETGLFSVMWSEHCSYKNSKPVLRKFPTEGKQVLQGPGEGAGIVDIGDG 89
Cdd:PRK01213    1 TPDTEELYAEMGLTDDEYERIREILGREPNFTELGMFSVMWSEHCSYKSSKPLLRKFPTKGPRVLQGPGENAGVVDIGDG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  90 LGVAFKVESHNHPSYVEPYQGAATGVGGIIRDVFSMGARPIAMLNSLRFGELDTPHAKYLVSEVVAGIAGYGNSIGIPTV 169
Cdd:PRK01213   81 QAVVFKIESHNHPSAVEPYQGAATGVGGILRDIFSMGARPIALLDSLRFGELDHPKTRYLLEGVVAGIGGYGNCIGVPTV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 170 GGEIQFDPCYTKNPLVNAMCVGLIEAKDIQKGQAKGIGNPVMYVGAKTGRDGIHGATFASVEFSEEGEQQRSAVQVGDPF 249
Cdd:PRK01213  161 GGEVYFDESYNGNPLVNAMCVGLVRHDDIVLAKASGVGNPVVYVGAKTGRDGIGGASFASAELSEESEEKRPAVQVGDPF 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 250 MEKLLLEACLDVIRdhSDILVGIQDMGAAGLVSSSSEMASKAGAGLELIMDDVPQRELHMTPYEMLLSESQERMLLCVKK 329
Cdd:PRK01213  241 MEKLLIEACLELIK--TGLVVGIQDMGAAGLTCSSSEMAAKGGLGIELDLDKVPLREEGMTPYEIMLSESQERMLLVVKP 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 330 GHVEEIQALFERYGLEAVVIGQVTDDKMYKIIHHGEVVANVPVDALAEDAPVYHKPSKEPARYQAFQeeeafvPVIDDVV 409
Cdd:PRK01213  319 GKEEEVLAIFEKWDLDAAVIGEVTDDGRLRVYHHGEVVADVPAEALADEAPVYDRPYKEPAYLDELQ------ADPEDLK 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 410 GVWKELLAQPTIASKRHIYEQYDYQVRTDTAVVPGSDAAIVRVRGTEKAIAMTTDCNSRYLYLDPEVGGAIAVAEAARNI 489
Cdd:PRK01213  393 EALLKLLSSPNIASKEWVYEQYDHEVQTNTVVKPGGDAAVLRIRGGGKGLALTTDCNPRYVYLDPYEGAKLAVAEAARNL 472
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 490 VCSGGKPLAITDGLNFGNPEKPEIFWEIEKAADGISAACLELDTPVISGNVSLYNETDGTGIYPTPVIGMVGLVEDLAHI 569
Cdd:PRK01213  473 AAVGATPLAITDCLNFGNPEKPEVMWQFVEAVRGLADACRALGTPVVGGNVSLYNETGGTAIYPTPVIGMVGLIDDVSKR 552
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 570 TTQDFKASGDVIFLIGETKAEYSGSELQKIQQGKISGRAPELDLVTEKKYQQLLLTAIQEGLVASSHDLAEGGFGVALAE 649
Cdd:PRK01213  553 TTSGFKKEGDLIYLLGETKDELGGSEYLKVIHGHVGGRPPKVDLEAEKRLQELVREAIREGLVTSAHDVSEGGLAVALAE 632
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 650 ATFKAGLGADVEVPFALS---QLFSESQSRFLVSVKPENEAAFAQLME--LEKVYRLGVVTaDETIRVKHKEDLVtvkTT 724
Cdd:PRK01213  633 MAIAGGLGAEVDLSDGLRpdaLLFSESQGRYVVSVPPENEEAFEALAEaaGVPATRIGVVG-GDALKVKGNDTES---LE 708
                         730
                  ....*....|....*
gi 1071575466 725 ELRSIWEGAIPCLLK 739
Cdd:PRK01213  709 ELREAWEGALPRLLG 723
PurL1 COG0046
Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and ...
4-739 0e+00

Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism]; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 439816 [Multi-domain]  Cd Length: 747  Bit Score: 1152.10  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466   4 MEPTTKEIKEQRIYQEMGLTDSEYDLVCSILGREPNYTETGLFSVMWSEHCSYKNSKPVLRKFPTEGKQVLQGPGEGAGI 83
Cdd:COG0046     6 LEGGREALEEANRELGLALSDDEYDYIVEILGRNPTDVELGMFSQMWSEHCSYKSSNALLKSLPTEGPRVLSGPGDNAGV 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  84 VDIGDGLGVAFKVESHNHPSYVEPYQGAATGVGGIIRDVFSMGARPIAMLNSLRFGELDTP--HAKYLVSEVVAGIAGYG 161
Cdd:COG0046    86 VDIGDGLAVVFKVESHNHPSAIEPYQGAATGVGGIIRDIFGMGARPIAGLDSLRFGNLDQPpaSPRYILIGVVAGIADYG 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 162 NSIGIPTVGGEIQFDPCYTKNPLVNAMCVGLIEAKDIQKGQAKGIGNPVMYVGAKTGRDGIHGATFASVEFSEEGEQQRS 241
Cdd:COG0046   166 NCFGVPTVGGEVRFDESYEGNPLVNAGGVGIIRADHIFKAKAPGVGNKVVYVGGPTGRDGIGGATFASEELGEDSELDRP 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 242 AVQVGDPFMEKLLLEACLDVIRDhsDILVGIQDMGAAGLVSSSSEMASKAGAGLELIMDDVPQRELHMTPYEMLLSESQE 321
Cdd:COG0046   246 AVQVGDPFMEKRLIEAILELGDT--GLIVGIQDMGAGGLSSASSEMAAKGGLGAEIDLDKVPLREPGMSPYEIWLSESQE 323
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 322 RMLLCVKKGHVEEIQALFERYGLEAVVIGQVTDDKMYKIIHHGEVVANVPVDALAEDAPVYHKPSKEPARYQAFQeeeaf 401
Cdd:COG0046   324 RMLLVVKPEKLEEFEAIFERWRLPAAVIGEVTDDGRLVVTDHGETVADLPLDFLAGGAPKYHRPAKRPAYLEPLD----- 398
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 402 VPVIDDVVGVWKELLAQPTIASKRHIYEQYDYQVRTDTAVVPG-SDAAIVRVRGTEKAIAMTTDCNSRYLYLDPEVGGAI 480
Cdd:COG0046   399 LPEPIDLEEALLRLLSSPNVASKEWLYRQYDREVGGNTVRDPGvADAAVVRVDGTYKGLAMSTGENPRYALLDPYAGARM 478
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 481 AVAEAARNIVCSGGKPLAITDGLNFGNPEKPEIFWEIEKAADGISAACLELDTPVISGNVSLYNETDG--TGIYPTPVIG 558
Cdd:COG0046   479 AVAEAARNLAAVGAEPLAITDCLNWGNPEKPEEMAQLVEAVKGLADACRALGIPVPSGNVSLYNETKDgkVAIPPTPVIG 558
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 559 MVGLVEDLAHITTQDFKASGDVIFLIGETKAEYSGSELQKIqQGKISGRAPELDLVTEKKYQQLLLTAIQEGLVASSHDL 638
Cdd:COG0046   559 AVGLVDDVRKTVTPDLKKEGDLLYLIGETKNELGGSEYAQV-LGQLGGEPPDVDLEAEKALFEAVQELIREGLILAAHDV 637
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 639 AEGGFGVALAEATFKAGLGADVEVPF-----ALSQLFSESQSRFLVSVKPENEAAFAQLMELEKV--YRLGVVTADETIR 711
Cdd:COG0046   638 SDGGLAVALAEMAFAGGLGADIDLDAlgdlrPDAALFSESQGRAVVQVAPEDAEAVEALLAEAGLpaHVIGTVTGDDRLV 717
                         730       740
                  ....*....|....*....|....*....
gi 1071575466 712 VKHK-EDLVTVKTTELRSIWEGAIPCLLK 739
Cdd:COG0046   718 IRRGgETLLSLSLAELRDAWEETLPRLRD 746
FGAM_synth_II TIGR01736
phosphoribosylformylglycinamidine synthase II; Phosphoribosylformylglycinamidine synthase is a ...
22-738 0e+00

phosphoribosylformylglycinamidine synthase II; Phosphoribosylformylglycinamidine synthase is a single, long polypeptide in most Proteobacteria and eukarotes. Three proteins are required in Bacillus subtilis and many other species. This is the longest of the three and is designated PurL, phosphoribosylformylglycinamidine synthase II, or FGAM synthase II. [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]


Pssm-ID: 273781 [Multi-domain]  Cd Length: 715  Bit Score: 1032.25  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  22 LTDSEYDLVCSILGREPNYTETGLFSVMWSEHCSYKNSKPVLRKFPTEGKQVLQGPGEGAGIVDIGDGLGVAFKVESHNH 101
Cdd:TIGR01736   1 LSDEEMELIREILGREPNDTELAMFSAMWSEHCSYKSSKKLLKQFPTKGPNVIQGPGEDAGVVDIGDGYAVVFKMESHNH 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 102 PSYVEPYQGAATGVGGIIRDVFSMGARPIAMLNSLRFGELDTPHAKYLVSEVVAGIAGYGNSIGIPTVGGEIQFDPCYTK 181
Cdd:TIGR01736  81 PSAIEPYNGAATGVGGILRDILSMGARPIALLDSLRFGPLDDPKNRYLFEGVVAGISDYGNRIGVPTVGGEVEFDESYNG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 182 NPLVNAMCVGLIEAKDIQKGQAKGIGNPVMYVGAKTGRDGIHGATFASVEFSEEGEQQ-RSAVQVGDPFMEKLLLEACLD 260
Cdd:TIGR01736 161 NPLVNVMCVGLVRKDDIVTGKAKGPGNKLVLVGGKTGRDGIGGATFASEELSEEAEEEdRPAVQVGDPFTEKLLIEATLE 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 261 VIRdhSDILVGIQDMGAAGLVSSSSEMASKAGAGLELIMDDVPQRELHMTPYEMLLSESQERMLLCVKKGHVEEIQALFE 340
Cdd:TIGR01736 241 AVD--TGLVKGIKDLGAAGLTSASSEMAAKGGLGAEIYLDKVPLREPGMTPYEIMLSESQERMLLVVAPEDVEEVLEIFE 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 341 RYGLEAVVIGQVTDDKMYKIIHHGEVVANVPVDALAeDAPVYHKPSKEPARYQAFQEEEAFVPVIDDVVgvwkELLAQPT 420
Cdd:TIGR01736 319 KYELPASVIGEVTDEGRIRLYYKGEVVADLPIELLA-DAPEYERPSEPPKYPEEEKEPEPPADLEDAFL----KVLSSPN 393
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 421 IASKRHIYEQYDYQVRTDTAVVPGSDAAIVRVRGTEK-AIAMTTDCNSRYLYLDPEVGGAIAVAEAARNIVCSGGKPLAI 499
Cdd:TIGR01736 394 IASKEWVYRQYDHEVQTRTVVKPGEDAAVLRIKETGKlGLALTADCNPRYVYLDPYAGAAGAVAEAYRNLAAVGAEPLAA 473
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 500 TDGLNFGNPEKPEIFWEIEKAADGISAACLELDTPVISGNVSLYNETDGTGIYPTPVIGMVGLVEDLAHITTQDFKASGD 579
Cdd:TIGR01736 474 VDCLNFGNPERPEVYWQFVEAVKGLGDACRALGTPVVGGNVSLYNETNGVPIAPTPTIGMVGLVEDVEKLLTSNFKKEGD 553
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 580 VIFLIGETKAEYSGSELQKIQQGKISGRAPELDLVTEKKYQQLLLTAIQEGLVASSHDLAEGGFGVALAEATFKAGLGAD 659
Cdd:TIGR01736 554 AIYLIGETKDELGGSEYLRVIHGIVSGQVPAVDLEEEKELADAVREAIRAGLVSAAHDVSRGGLAVALAEMAAASGIGAE 633
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 660 VEVPFALSQ-----LFSESQSRFLVSVKPENEAAFAQLMELeKVYRLGVVTaDETIRVKHKEDLVTVKTTELRSIWEGAI 734
Cdd:TIGR01736 634 VDIDEIASArpdelLFSESNGRAIVAVPEEKAEEAVKSKGV-PAKVIGKTG-GDRLTIKTGDDTISVSVKELRDAWEEAL 711

                  ....
gi 1071575466 735 PCLL 738
Cdd:TIGR01736 712 PEYM 715
PurL_repeat1 cd02203
PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat. ...
42-370 3.22e-173

PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat. FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway. In eukaryotes and Gram-negative bacteria, FGAR-AT is encoded by the purL gene as a multidomain protein with a molecular mass of about 140 kDa. In Gram-positive bacteria and archaea FGAR-AT is a complex of three proteins: PurS, PurL, and PurQ. PurL itself contains two tandem N- and C-terminal domains (four domains altogether). The N-terminal domains bind ATP and are related to the ATP-binding domains of HypE, ThiL, SelD and PurM.


Pssm-ID: 100034 [Multi-domain]  Cd Length: 313  Bit Score: 498.54  E-value: 3.22e-173
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  42 ETGLFSVMWSEHCSYKNSKPVLRKFptegkqvlqgpgegagivdigdgLGVAFKVESHNHPSYVEPYQGAATGVGGIIRD 121
Cdd:cd02203     1 ELGMFAQMWSEHCRHKSFKSLLKMI-----------------------WAVVFKVETHNHPSAIEPFGGAATGVGGIIRD 57
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 122 VFSMGARPIAMLNSLRFGELDTP--------HAKYLVSEVVAGIAGYGNSIGIPTVGGEIQFDPCYTKNPLVNAMCVGLI 193
Cdd:cd02203    58 ILSMGARPIALLDGLRFGDLDIPgyepkgklSPRRILDGVVAGISDYGNCIGIPTVGGEVRFDPSYYGNPLVNVGCVGIV 137
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 194 EAKDIQKGQAKGIGNPVMYVGAKTGRDGIHGATFASVEFSE-EGEQQRSAVQVGDPFMEKLLLEACLDVIRDhsDILVGI 272
Cdd:cd02203   138 PKDHIVKSKAPGPGDLVVLVGGRTGRDGIGGATFSSKELSEnSSELDRPAVQVGDPFMEKKLQEAILEARET--GLIVGI 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 273 QDMGAAGLVSSSSEMASKAGAGLELIMDDVPQRELHMTPYEMLLSESQERMLLCVKKGHVEEIQALFERYGLEAVVIGQV 352
Cdd:cd02203   216 QDLGAGGLSSAVSEMAAKGGLGAEIDLDKVPLREPGMSPWEIWISESQERMLLVVPPEDLEEFLAICKKEDLEAAVIGEV 295
                         330
                  ....*....|....*...
gi 1071575466 353 TDDKMYKIIHHGEVVANV 370
Cdd:cd02203   296 TDDGRLRLYYKGEVVADL 313
AIRS_C pfam02769
AIR synthase related protein, C-terminal domain; This family includes Hydrogen expression ...
205-362 5.88e-35

AIR synthase related protein, C-terminal domain; This family includes Hydrogen expression/formation protein HypE, AIR synthases EC:6.3.3.1, FGAM synthase EC:6.3.5.3 and selenide, water dikinase EC:2.7.9.3. The function of the C-terminal domain of AIR synthase is unclear, but the cleft formed between N and C domains is postulated as a sulphate binding site.


Pssm-ID: 460684 [Multi-domain]  Cd Length: 152  Bit Score: 129.77  E-value: 5.88e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 205 GIGNPVMYVGAktgrDGIHGATFASVEFSEEGEQqRSAVQVGDPFMEKLLLEACLDVIRDHSDIlVGIQDMGAAGLVSSS 284
Cdd:pfam02769   1 KPGDVLILLGS----SGLHGAGLSLSRKGLEDSG-LAAVQLGDPLLEPTLIYVKLLLAALGGLV-KAMHDITGGGLAGAL 74
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1071575466 285 SEMASKAGAGLELIMDDVPQRELHMTPYEMLLSESQERMLLCVKKGHVEEIQALFERYGLEAVVIGQVTDDKMYKIIH 362
Cdd:pfam02769  75 AEMAPASGVGAEIDLDKVPIFEELMLPLEMLLSENQGRGLVVVAPEEAEAVLAILEKEGLEAAVIGEVTAGGRLTVIV 152
 
Name Accession Description Interval E-value
PRK01213 PRK01213
phosphoribosylformylglycinamidine synthase subunit PurL;
10-739 0e+00

phosphoribosylformylglycinamidine synthase subunit PurL;


Pssm-ID: 234921 [Multi-domain]  Cd Length: 724  Bit Score: 1295.07  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  10 EIKEQRIYQEMGLTDSEYDLVCSILGREPNYTETGLFSVMWSEHCSYKNSKPVLRKFPTEGKQVLQGPGEGAGIVDIGDG 89
Cdd:PRK01213    1 TPDTEELYAEMGLTDDEYERIREILGREPNFTELGMFSVMWSEHCSYKSSKPLLRKFPTKGPRVLQGPGENAGVVDIGDG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  90 LGVAFKVESHNHPSYVEPYQGAATGVGGIIRDVFSMGARPIAMLNSLRFGELDTPHAKYLVSEVVAGIAGYGNSIGIPTV 169
Cdd:PRK01213   81 QAVVFKIESHNHPSAVEPYQGAATGVGGILRDIFSMGARPIALLDSLRFGELDHPKTRYLLEGVVAGIGGYGNCIGVPTV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 170 GGEIQFDPCYTKNPLVNAMCVGLIEAKDIQKGQAKGIGNPVMYVGAKTGRDGIHGATFASVEFSEEGEQQRSAVQVGDPF 249
Cdd:PRK01213  161 GGEVYFDESYNGNPLVNAMCVGLVRHDDIVLAKASGVGNPVVYVGAKTGRDGIGGASFASAELSEESEEKRPAVQVGDPF 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 250 MEKLLLEACLDVIRdhSDILVGIQDMGAAGLVSSSSEMASKAGAGLELIMDDVPQRELHMTPYEMLLSESQERMLLCVKK 329
Cdd:PRK01213  241 MEKLLIEACLELIK--TGLVVGIQDMGAAGLTCSSSEMAAKGGLGIELDLDKVPLREEGMTPYEIMLSESQERMLLVVKP 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 330 GHVEEIQALFERYGLEAVVIGQVTDDKMYKIIHHGEVVANVPVDALAEDAPVYHKPSKEPARYQAFQeeeafvPVIDDVV 409
Cdd:PRK01213  319 GKEEEVLAIFEKWDLDAAVIGEVTDDGRLRVYHHGEVVADVPAEALADEAPVYDRPYKEPAYLDELQ------ADPEDLK 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 410 GVWKELLAQPTIASKRHIYEQYDYQVRTDTAVVPGSDAAIVRVRGTEKAIAMTTDCNSRYLYLDPEVGGAIAVAEAARNI 489
Cdd:PRK01213  393 EALLKLLSSPNIASKEWVYEQYDHEVQTNTVVKPGGDAAVLRIRGGGKGLALTTDCNPRYVYLDPYEGAKLAVAEAARNL 472
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 490 VCSGGKPLAITDGLNFGNPEKPEIFWEIEKAADGISAACLELDTPVISGNVSLYNETDGTGIYPTPVIGMVGLVEDLAHI 569
Cdd:PRK01213  473 AAVGATPLAITDCLNFGNPEKPEVMWQFVEAVRGLADACRALGTPVVGGNVSLYNETGGTAIYPTPVIGMVGLIDDVSKR 552
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 570 TTQDFKASGDVIFLIGETKAEYSGSELQKIQQGKISGRAPELDLVTEKKYQQLLLTAIQEGLVASSHDLAEGGFGVALAE 649
Cdd:PRK01213  553 TTSGFKKEGDLIYLLGETKDELGGSEYLKVIHGHVGGRPPKVDLEAEKRLQELVREAIREGLVTSAHDVSEGGLAVALAE 632
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 650 ATFKAGLGADVEVPFALS---QLFSESQSRFLVSVKPENEAAFAQLME--LEKVYRLGVVTaDETIRVKHKEDLVtvkTT 724
Cdd:PRK01213  633 MAIAGGLGAEVDLSDGLRpdaLLFSESQGRYVVSVPPENEEAFEALAEaaGVPATRIGVVG-GDALKVKGNDTES---LE 708
                         730
                  ....*....|....*
gi 1071575466 725 ELRSIWEGAIPCLLK 739
Cdd:PRK01213  709 ELREAWEGALPRLLG 723
PurL1 COG0046
Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and ...
4-739 0e+00

Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism]; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 439816 [Multi-domain]  Cd Length: 747  Bit Score: 1152.10  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466   4 MEPTTKEIKEQRIYQEMGLTDSEYDLVCSILGREPNYTETGLFSVMWSEHCSYKNSKPVLRKFPTEGKQVLQGPGEGAGI 83
Cdd:COG0046     6 LEGGREALEEANRELGLALSDDEYDYIVEILGRNPTDVELGMFSQMWSEHCSYKSSNALLKSLPTEGPRVLSGPGDNAGV 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  84 VDIGDGLGVAFKVESHNHPSYVEPYQGAATGVGGIIRDVFSMGARPIAMLNSLRFGELDTP--HAKYLVSEVVAGIAGYG 161
Cdd:COG0046    86 VDIGDGLAVVFKVESHNHPSAIEPYQGAATGVGGIIRDIFGMGARPIAGLDSLRFGNLDQPpaSPRYILIGVVAGIADYG 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 162 NSIGIPTVGGEIQFDPCYTKNPLVNAMCVGLIEAKDIQKGQAKGIGNPVMYVGAKTGRDGIHGATFASVEFSEEGEQQRS 241
Cdd:COG0046   166 NCFGVPTVGGEVRFDESYEGNPLVNAGGVGIIRADHIFKAKAPGVGNKVVYVGGPTGRDGIGGATFASEELGEDSELDRP 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 242 AVQVGDPFMEKLLLEACLDVIRDhsDILVGIQDMGAAGLVSSSSEMASKAGAGLELIMDDVPQRELHMTPYEMLLSESQE 321
Cdd:COG0046   246 AVQVGDPFMEKRLIEAILELGDT--GLIVGIQDMGAGGLSSASSEMAAKGGLGAEIDLDKVPLREPGMSPYEIWLSESQE 323
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 322 RMLLCVKKGHVEEIQALFERYGLEAVVIGQVTDDKMYKIIHHGEVVANVPVDALAEDAPVYHKPSKEPARYQAFQeeeaf 401
Cdd:COG0046   324 RMLLVVKPEKLEEFEAIFERWRLPAAVIGEVTDDGRLVVTDHGETVADLPLDFLAGGAPKYHRPAKRPAYLEPLD----- 398
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 402 VPVIDDVVGVWKELLAQPTIASKRHIYEQYDYQVRTDTAVVPG-SDAAIVRVRGTEKAIAMTTDCNSRYLYLDPEVGGAI 480
Cdd:COG0046   399 LPEPIDLEEALLRLLSSPNVASKEWLYRQYDREVGGNTVRDPGvADAAVVRVDGTYKGLAMSTGENPRYALLDPYAGARM 478
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 481 AVAEAARNIVCSGGKPLAITDGLNFGNPEKPEIFWEIEKAADGISAACLELDTPVISGNVSLYNETDG--TGIYPTPVIG 558
Cdd:COG0046   479 AVAEAARNLAAVGAEPLAITDCLNWGNPEKPEEMAQLVEAVKGLADACRALGIPVPSGNVSLYNETKDgkVAIPPTPVIG 558
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 559 MVGLVEDLAHITTQDFKASGDVIFLIGETKAEYSGSELQKIqQGKISGRAPELDLVTEKKYQQLLLTAIQEGLVASSHDL 638
Cdd:COG0046   559 AVGLVDDVRKTVTPDLKKEGDLLYLIGETKNELGGSEYAQV-LGQLGGEPPDVDLEAEKALFEAVQELIREGLILAAHDV 637
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 639 AEGGFGVALAEATFKAGLGADVEVPF-----ALSQLFSESQSRFLVSVKPENEAAFAQLMELEKV--YRLGVVTADETIR 711
Cdd:COG0046   638 SDGGLAVALAEMAFAGGLGADIDLDAlgdlrPDAALFSESQGRAVVQVAPEDAEAVEALLAEAGLpaHVIGTVTGDDRLV 717
                         730       740
                  ....*....|....*....|....*....
gi 1071575466 712 VKHK-EDLVTVKTTELRSIWEGAIPCLLK 739
Cdd:COG0046   718 IRRGgETLLSLSLAELRDAWEETLPRLRD 746
FGAM_synth_II TIGR01736
phosphoribosylformylglycinamidine synthase II; Phosphoribosylformylglycinamidine synthase is a ...
22-738 0e+00

phosphoribosylformylglycinamidine synthase II; Phosphoribosylformylglycinamidine synthase is a single, long polypeptide in most Proteobacteria and eukarotes. Three proteins are required in Bacillus subtilis and many other species. This is the longest of the three and is designated PurL, phosphoribosylformylglycinamidine synthase II, or FGAM synthase II. [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]


Pssm-ID: 273781 [Multi-domain]  Cd Length: 715  Bit Score: 1032.25  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  22 LTDSEYDLVCSILGREPNYTETGLFSVMWSEHCSYKNSKPVLRKFPTEGKQVLQGPGEGAGIVDIGDGLGVAFKVESHNH 101
Cdd:TIGR01736   1 LSDEEMELIREILGREPNDTELAMFSAMWSEHCSYKSSKKLLKQFPTKGPNVIQGPGEDAGVVDIGDGYAVVFKMESHNH 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 102 PSYVEPYQGAATGVGGIIRDVFSMGARPIAMLNSLRFGELDTPHAKYLVSEVVAGIAGYGNSIGIPTVGGEIQFDPCYTK 181
Cdd:TIGR01736  81 PSAIEPYNGAATGVGGILRDILSMGARPIALLDSLRFGPLDDPKNRYLFEGVVAGISDYGNRIGVPTVGGEVEFDESYNG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 182 NPLVNAMCVGLIEAKDIQKGQAKGIGNPVMYVGAKTGRDGIHGATFASVEFSEEGEQQ-RSAVQVGDPFMEKLLLEACLD 260
Cdd:TIGR01736 161 NPLVNVMCVGLVRKDDIVTGKAKGPGNKLVLVGGKTGRDGIGGATFASEELSEEAEEEdRPAVQVGDPFTEKLLIEATLE 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 261 VIRdhSDILVGIQDMGAAGLVSSSSEMASKAGAGLELIMDDVPQRELHMTPYEMLLSESQERMLLCVKKGHVEEIQALFE 340
Cdd:TIGR01736 241 AVD--TGLVKGIKDLGAAGLTSASSEMAAKGGLGAEIYLDKVPLREPGMTPYEIMLSESQERMLLVVAPEDVEEVLEIFE 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 341 RYGLEAVVIGQVTDDKMYKIIHHGEVVANVPVDALAeDAPVYHKPSKEPARYQAFQEEEAFVPVIDDVVgvwkELLAQPT 420
Cdd:TIGR01736 319 KYELPASVIGEVTDEGRIRLYYKGEVVADLPIELLA-DAPEYERPSEPPKYPEEEKEPEPPADLEDAFL----KVLSSPN 393
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 421 IASKRHIYEQYDYQVRTDTAVVPGSDAAIVRVRGTEK-AIAMTTDCNSRYLYLDPEVGGAIAVAEAARNIVCSGGKPLAI 499
Cdd:TIGR01736 394 IASKEWVYRQYDHEVQTRTVVKPGEDAAVLRIKETGKlGLALTADCNPRYVYLDPYAGAAGAVAEAYRNLAAVGAEPLAA 473
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 500 TDGLNFGNPEKPEIFWEIEKAADGISAACLELDTPVISGNVSLYNETDGTGIYPTPVIGMVGLVEDLAHITTQDFKASGD 579
Cdd:TIGR01736 474 VDCLNFGNPERPEVYWQFVEAVKGLGDACRALGTPVVGGNVSLYNETNGVPIAPTPTIGMVGLVEDVEKLLTSNFKKEGD 553
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 580 VIFLIGETKAEYSGSELQKIQQGKISGRAPELDLVTEKKYQQLLLTAIQEGLVASSHDLAEGGFGVALAEATFKAGLGAD 659
Cdd:TIGR01736 554 AIYLIGETKDELGGSEYLRVIHGIVSGQVPAVDLEEEKELADAVREAIRAGLVSAAHDVSRGGLAVALAEMAAASGIGAE 633
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 660 VEVPFALSQ-----LFSESQSRFLVSVKPENEAAFAQLMELeKVYRLGVVTaDETIRVKHKEDLVTVKTTELRSIWEGAI 734
Cdd:TIGR01736 634 VDIDEIASArpdelLFSESNGRAIVAVPEEKAEEAVKSKGV-PAKVIGKTG-GDRLTIKTGDDTISVSVKELRDAWEEAL 711

                  ....
gi 1071575466 735 PCLL 738
Cdd:TIGR01736 712 PEYM 715
PurL_repeat1 cd02203
PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat. ...
42-370 3.22e-173

PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat. FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway. In eukaryotes and Gram-negative bacteria, FGAR-AT is encoded by the purL gene as a multidomain protein with a molecular mass of about 140 kDa. In Gram-positive bacteria and archaea FGAR-AT is a complex of three proteins: PurS, PurL, and PurQ. PurL itself contains two tandem N- and C-terminal domains (four domains altogether). The N-terminal domains bind ATP and are related to the ATP-binding domains of HypE, ThiL, SelD and PurM.


Pssm-ID: 100034 [Multi-domain]  Cd Length: 313  Bit Score: 498.54  E-value: 3.22e-173
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  42 ETGLFSVMWSEHCSYKNSKPVLRKFptegkqvlqgpgegagivdigdgLGVAFKVESHNHPSYVEPYQGAATGVGGIIRD 121
Cdd:cd02203     1 ELGMFAQMWSEHCRHKSFKSLLKMI-----------------------WAVVFKVETHNHPSAIEPFGGAATGVGGIIRD 57
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 122 VFSMGARPIAMLNSLRFGELDTP--------HAKYLVSEVVAGIAGYGNSIGIPTVGGEIQFDPCYTKNPLVNAMCVGLI 193
Cdd:cd02203    58 ILSMGARPIALLDGLRFGDLDIPgyepkgklSPRRILDGVVAGISDYGNCIGIPTVGGEVRFDPSYYGNPLVNVGCVGIV 137
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 194 EAKDIQKGQAKGIGNPVMYVGAKTGRDGIHGATFASVEFSE-EGEQQRSAVQVGDPFMEKLLLEACLDVIRDhsDILVGI 272
Cdd:cd02203   138 PKDHIVKSKAPGPGDLVVLVGGRTGRDGIGGATFSSKELSEnSSELDRPAVQVGDPFMEKKLQEAILEARET--GLIVGI 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 273 QDMGAAGLVSSSSEMASKAGAGLELIMDDVPQRELHMTPYEMLLSESQERMLLCVKKGHVEEIQALFERYGLEAVVIGQV 352
Cdd:cd02203   216 QDLGAGGLSSAVSEMAAKGGLGAEIDLDKVPLREPGMSPWEIWISESQERMLLVVPPEDLEEFLAICKKEDLEAAVIGEV 295
                         330
                  ....*....|....*...
gi 1071575466 353 TDDKMYKIIHHGEVVANV 370
Cdd:cd02203   296 TDDGRLRLYYKGEVVADL 313
PRK14090 PRK14090
phosphoribosylformylglycinamidine synthase subunit PurL;
28-564 1.65e-132

phosphoribosylformylglycinamidine synthase subunit PurL;


Pssm-ID: 184499 [Multi-domain]  Cd Length: 601  Bit Score: 405.01  E-value: 1.65e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  28 DLVCSILGREPNYTETGLFSVMWSEHCSYKNSKPVLRKFPtegkqvLQGPGEGAGIVDIGDGLGVAFKVESHNHPSYVEP 107
Cdd:PRK14090    5 NILEEKLGREPTFVELQAFSVMWSEHCGYSHTKKYIRRLP------KTGFEGNAGVVNLDDYYSIAFKIESHNHPSAIEP 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 108 YQGAATGVGGIIRDVFSMGARPIAMLNSLrfgeldtpHAKYLVSEVVAGIAGYGNSIGIPTVGGEIQFDPCYTKNPLVNA 187
Cdd:PRK14090   79 YNGAATGVGGIIRDVLAMGARPTAIFDSL--------HMSRIIDGIIEGIADYGNSIGVPTVGGELRISSLYAHNPLVNV 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 188 MCVGLIEAKDIQKGQAKGIGNPVMYVGAKTGRDGIHGATFASVEFSEEGEQQRSaVQVGDPFMEKLLLEACLDVIRDhsD 267
Cdd:PRK14090  151 LAAGVVRNDMLVDSKASRPGQVIVIFGGATGRDGIHGASFASEDLTGEKATKLS-IQVGDPFAEKMLIEAFLEMVEE--G 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 268 ILVGIQDMGAAGLVSSSSEMASKAGAGLELIMDDVPQRELHMTPYEMLLSESQERMLLCVKKGHVEEIQALFERYGLEAV 347
Cdd:PRK14090  228 LVEGAQDLGAGGVLSATSELVAKGGLGAIVHLDRVPLREPDMEPWEILISESQERMAVVTSPEKASRILEIAKKHLLFGD 307
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 348 VIGQVTDDKMYKIIHHGEVVANVPVDALAEdAPvyhkpskEPARYQAFQEEeafVPVIDDVvgVWKELLAqptiaskRHI 427
Cdd:PRK14090  308 IVAEVIDDPIYRVMYRDDLVMEVPVQLLAN-AP-------EEEIVEYTPGE---IPEFKRV--EFEEVNA-------REV 367
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 428 YEQYDYQVRTDTAVVPGSDAAIVRVRGTEkAIAMTTDCNSRYLYLDPEVGGAIAVAEAARNIVCSGGKPLAITDGLNFGN 507
Cdd:PRK14090  368 FEQYDHMVGTDTVLPPGFGAAVMRIKRDG-GYSLVTHSRADLALQDTYWGTFIAVLESVRKTLSVGAEPLAITNCVNYGD 446
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1071575466 508 PEKPEIfwEIEKAADGISAACLELDTPVISGNVSLYNETDGTGIYPTPVIGMVGLVE 564
Cdd:PRK14090  447 PDVDPV--GLSAMMTALKDACEFSGVPVASGNASLYNTYQGKPIPPTLVVGMLGKVN 501
PurL_repeat2 cd02204
PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), second repeat. ...
446-704 1.16e-112

PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), second repeat. FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway. In eukaryotes and Gram-negative bacteria, FGAR-AT is encoded by the purL gene as a multidomain protein with a molecular mass of about 140 kDa. In Gram-positive bacteria and archaea FGAR-AT is a complex of three proteins: PurS, PurL, and PurQ. PurL itself contains two tandem N- and C-terminal domains (four domains altogether). The N-terminal domains bind ATP and are related to the ATP-binding domains of HypE, ThiL, SelD and PurM.


Pssm-ID: 100035 [Multi-domain]  Cd Length: 264  Bit Score: 341.44  E-value: 1.16e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 446 DAAIVRVRG-TEKAIAMTTDCNSRYLYLDPEVGGAIAVAEAARNIVCSGGKPLAITDGLNFGNPEKPE-IFWEIEKAADG 523
Cdd:cd02204     1 DAAVLRIPGeTDKGLAMSTGENPRYSLLDPYAGAALAVAEAVRNLVAVGADPLAITDCLNFGNPEKPEgEMGQLVEAVLG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 524 ISAACLELDTPVISGNVSLYNETDGTGIYPTPVIGMVGLVEDLAHITTQDFKASGDVIFLIGETKAEYSGSELQKIQQGK 603
Cdd:cd02204    81 LGDACRALGTPVIGGKDSLYNETEGVAIPPTLVIGAVGVVDDVRKIVTLDFKKEGDLLYLIGETKDELGGSEYALAYHGL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 604 ISGRAPELDLVTEKKYQQLLLTAIQEGLVASSHDLAEGGFGVALAEATFKAGLGADVEVPFALSQ---LFSESQSRFLVS 680
Cdd:cd02204   161 GGGAPPLVDLEREKALFDAVQELIKEGLVLSAHDVSDGGLAVALAEMAFAGGLGAEVDLSKDDAEdelLFSESLGRVLVE 240
                         250       260
                  ....*....|....*....|....
gi 1071575466 681 VKPENEAAFAQLMELEKVYRLGVV 704
Cdd:cd02204   241 VKPENEEVFEAEEAGVPATVIGTV 264
PurL cd02193
Formylglycinamide ribonucleotide amidotransferase (FGAR-AT) catalyzes the ATP-dependent ...
91-352 3.18e-51

Formylglycinamide ribonucleotide amidotransferase (FGAR-AT) catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway. In eukaryotes and Gram-negative bacteria, FGAR-AT is encoded by the purL gene as a multidomain protein with a molecular mass of about 140 kDa. In Gram-positive bacteria and archaea FGAR-AT is a complex of three proteins: PurS, PurL, and PurQ. PurL itself contains two tandem N- and C-terminal domains (four domains altogether). The N-terminal domains bind ATP and are related to the ATP-binding domains of HypE, ThiL, SelD and PurM.


Pssm-ID: 100029 [Multi-domain]  Cd Length: 272  Bit Score: 179.80  E-value: 3.18e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  91 GVAFKVESHNHPSYVEPYQGAATGVGGIIRDVFSMG--ARPIAMLNSLRFGELDtPHAKYLVSEVVAGIAGYGNSIGIPT 168
Cdd:cd02193     2 GEAMKIEEHNHPAAIDPAAGAATGVGGAIRDIAATGidAKPIALSANWMASAGH-PGEDAILYDAVKGVAELCNQLGLPI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 169 VGGEIQFDPCY-----------TKNPLVNAMCVGLIEAKDIQKGQAKGIGNPVMYVGAKTGRDGIHGATFASVEFSEEGE 237
Cdd:cd02193    81 PVGKDRMSMKTrwqegneqremTHPPSLVISAFGRVRDDRHTLPQLSTEGNALLLIGGGKGHNGLGGTALASVALSYRQL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 238 QQRSaVQVGDPFMEKLLLEACLDVIRdhSDILVGIQDMGAAGLVSSSSEMASKAGAGLELIMDDVPQRELHMTPYEMLLS 317
Cdd:cd02193   161 GDKS-AQVRDPAQEKGFYEAMQALVA--AGKLLAWHDRGAGGLLVALAELVFAGHCGVQVDLAALGDDEPDMEPLEIALF 237
                         250       260       270
                  ....*....|....*....|....*....|....*
gi 1071575466 318 ESQERMLLCVKKGHVEEIQALFERYGLEAVVIGQV 352
Cdd:cd02193   238 ESQERGVIQVRAEDRDAVEEAQYGLADCVHVLGQA 272
AIRS_C pfam02769
AIR synthase related protein, C-terminal domain; This family includes Hydrogen expression ...
205-362 5.88e-35

AIR synthase related protein, C-terminal domain; This family includes Hydrogen expression/formation protein HypE, AIR synthases EC:6.3.3.1, FGAM synthase EC:6.3.5.3 and selenide, water dikinase EC:2.7.9.3. The function of the C-terminal domain of AIR synthase is unclear, but the cleft formed between N and C domains is postulated as a sulphate binding site.


Pssm-ID: 460684 [Multi-domain]  Cd Length: 152  Bit Score: 129.77  E-value: 5.88e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 205 GIGNPVMYVGAktgrDGIHGATFASVEFSEEGEQqRSAVQVGDPFMEKLLLEACLDVIRDHSDIlVGIQDMGAAGLVSSS 284
Cdd:pfam02769   1 KPGDVLILLGS----SGLHGAGLSLSRKGLEDSG-LAAVQLGDPLLEPTLIYVKLLLAALGGLV-KAMHDITGGGLAGAL 74
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1071575466 285 SEMASKAGAGLELIMDDVPQRELHMTPYEMLLSESQERMLLCVKKGHVEEIQALFERYGLEAVVIGQVTDDKMYKIIH 362
Cdd:pfam02769  75 AEMAPASGVGAEIDLDKVPIFEELMLPLEMLLSENQGRGLVVVAPEEAEAVLAILEKEGLEAAVIGEVTAGGRLTVIV 152
PRK05297 PRK05297
phosphoribosylformylglycinamidine synthase; Provisional
95-730 2.59e-34

phosphoribosylformylglycinamidine synthase; Provisional


Pssm-ID: 235394 [Multi-domain]  Cd Length: 1290  Bit Score: 141.09  E-value: 2.59e-34
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466   95 KVESHNHPSYVEPYQGAATGVGGIIRDVFS--MGARPIA-----MLNSLRFGELDTP-HAKYLVSEVVA----------- 155
Cdd:PRK05297   288 KVETHNHPTAISPFPGAATGSGGEIRDEGAtgRGSKPKAgltgfSVSNLRIPGFEQPwEEDYGKPERIAsaldimiegpl 367
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  156 GIAGYGNSIGIPTVGG-----EIQFDPC------YTKnPLVNAMCVGLIEAKDIQKGQ-AKG-----IGNPVMyvgaktg 218
Cdd:PRK05297   368 GGAAFNNEFGRPNLLGyfrtfEQKVNSHneevrgYHK-PIMLAGGIGNIRADHVQKGEiPVGaklivLGGPAM------- 439
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  219 RDGIHGATFASV---EFSEEGEqqRSAVQVGDPFMEKllleACLDVIR------DHSDIlVGIQDMGAAGLVSSSSEMAS 289
Cdd:PRK05297   440 RIGLGGGAASSMasgQSSEDLD--FASVQRGNPEMER----RCQEVIDrcwqlgDDNPI-LSIHDVGAGGLSNAFPELVN 512
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  290 KAGAGLELIMDDVPQRELHMTPYEMLLSESQERMLLCVKKGHVEEIQALFERyglE----AVViGQVTDDKMYKII--HH 363
Cdd:PRK05297   513 DGGRGGRFDLRKIPNDEPGMSPLEIWCNESQERYVLAIAPEDLELFEAICER---ErcpfAVV-GEATEERHLTLEdsHF 588
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  364 GEVVANVPVDALAEDAPVYHKPSK-EPARYQAFQEEEAfvpVIDDVVgvwKELLAQPTIASKRHIYEQYDyqvRT----- 437
Cdd:PRK05297   589 DNKPVDLPLDVLLGKPPKMHRDVKtVKAKGPALDYSGI---DLAEAV---ERVLRLPTVASKSFLITIGD---RSvtglv 659
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  438 --DTAV----VPGSDAAIvrvrgtekaiaMTTDCNSRY-------------LyLDPEVGGAIAVAEAARNIVCSggkPLA 498
Cdd:PRK05297   660 arDQMVgpwqVPVADCAV-----------TAASYDGYAgeamamgertpvaL-LDAAASARMAVGEALTNIAAA---PIG 724
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  499 ITDGLNF--------GNPEkpeifweiEKAA--DGISAA----CLELD--TPVisGNVSL-----YNETDGTGIYPTP-- 555
Cdd:PRK05297   725 DLKRIKLsanwmaaaGHPG--------EDARlyDAVKAVgmelCPALGitIPV--GKDSLsmktkWQEGGEDKEVTSPls 794
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  556 -VIGMVGLVEDLAHITTQDFKASGD-VIFLI--GETKAEYSGSELQKIqQGKISGRAPELDLVTEKK-----YQQLllta 626
Cdd:PRK05297   795 lIISAFAPVEDVRKTLTPQLRTDKDtALLLIdlGRGKNRLGGSALAQV-YNQLGDKAPDVDDAEDLKgffnaIQAL---- 869
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  627 IQEGLVASSHDLAEGGFGVALAEATFKAGLGADVEVPF----ALSQLFSESqsrfL---VSVKPENEAAFAQLME----L 695
Cdd:PRK05297   870 VAEGLLLAYHDRSDGGLLTTLAEMAFAGHCGLDIDLDAlgddALAALFNEE----LgavIQVRAADRDAVEAILAehglS 945
                          730       740       750
                   ....*....|....*....|....*....|....*.
gi 1071575466  696 EKVYRLGVVTADETIRVKHKEDLVTVKT-TELRSIW 730
Cdd:PRK05297   946 DCVHVIGKPNAGDRIVITRNGKTVFSESrTELRRWW 981
PurM-like cd00396
AIR (aminoimidazole ribonucleotide) synthase related protein. This family includes Hydrogen ...
91-351 5.91e-31

AIR (aminoimidazole ribonucleotide) synthase related protein. This family includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM (formylglycinamidine ribonucleotide) synthase and Selenophosphate synthetase (SelD). The N-terminal domain of AIR synthase forms the dimer interface of the protein, and is suggested as a putative ATP binding domain.


Pssm-ID: 100027 [Multi-domain]  Cd Length: 222  Bit Score: 120.96  E-value: 5.91e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  91 GVAFKVESHNHPSYVEPYQGAATGVGGIIRDVFSMGARPIAMLNSLRFGELDTPHakyLVSEVVAGIAGYGNSIGIPTVG 170
Cdd:cd00396     1 SLAMSTDGINPPLAINPWAGGRLAVGGAVNDIAAMGARPIALLASLSLSNGLEVD---ILEDVVDGVAEACNQLGVPIVG 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 171 GEIQFDPCYTK-NPLVNAMCVGLIEAKDIQKGqakgignpvmyvgaktgrdgihgatfasvefseegeqqrSAVQVGDpf 249
Cdd:cd00396    78 GHTSVSPGTMGhKLSLAVFAIGVVEKDRVIDS---------------------------------------SGARPGD-- 116
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 250 meKLLLEACLDVIRDHSDILV-GIQDMGAAGLVSSSSEMASKAGAGLELIMDDVPQRELHM-----TPYEMLLSESQERM 323
Cdd:cd00396   117 --VLILTGVDAVLELVAAGDVhAMHDITDGGLLGTLPELAQASGVGAEIDLEAIPLDEVVRwlcveHIEEALLFNSSGGL 194
                         250       260
                  ....*....|....*....|....*...
gi 1071575466 324 LLCVKKGHVEEIQALFERYGLEAVVIGQ 351
Cdd:cd00396   195 LIAVPAEEADAVLLLLNGNGIDAAVIGR 222
AIRS pfam00586
AIR synthase related protein, N-terminal domain; This family includes Hydrogen expression ...
91-193 2.08e-30

AIR synthase related protein, N-terminal domain; This family includes Hydrogen expression/formation protein HypE, AIR synthases EC:6.3.3.1, FGAM synthase EC:6.3.5.3 and selenide, water dikinase EC:2.7.9.3. The N-terminal domain of AIR synthase forms the dimer interface of the protein, and is suggested as a putative ATP binding domain.


Pssm-ID: 459859 [Multi-domain]  Cd Length: 104  Bit Score: 115.24  E-value: 2.08e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  91 GVAFKVESHNHPSYVEPYQG-AATGVGGIIRDVFSMGARPIAMLNSLRFGELdtPHAKYLVSEVVAGIAGYGNSIGIPTV 169
Cdd:pfam00586   4 AVAVTTDGHGTPSLVDPYHFpGAKAVAGNLSDIAAMGARPLAFLDSLALPGG--PEVEWVLEEIVEGIAEACREAGVPLV 81
                          90       100
                  ....*....|....*....|....
gi 1071575466 170 GGEIQFDPCYtKNPLVNAMCVGLI 193
Cdd:pfam00586  82 GGDTSFDPEG-GKPTISVTAVGIV 104
AIRS pfam00586
AIR synthase related protein, N-terminal domain; This family includes Hydrogen expression ...
458-563 5.73e-30

AIR synthase related protein, N-terminal domain; This family includes Hydrogen expression/formation protein HypE, AIR synthases EC:6.3.3.1, FGAM synthase EC:6.3.5.3 and selenide, water dikinase EC:2.7.9.3. The N-terminal domain of AIR synthase forms the dimer interface of the protein, and is suggested as a putative ATP binding domain.


Pssm-ID: 459859 [Multi-domain]  Cd Length: 104  Bit Score: 114.08  E-value: 5.73e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 458 AIAMTTDCNSRYLYLDPEVG-GAIAVAEAARNIVCSGGKPLAITDGLNFgnPEKPEIFWEIEKAADGISAACLELDTPVI 536
Cdd:pfam00586   4 AVAVTTDGHGTPSLVDPYHFpGAKAVAGNLSDIAAMGARPLAFLDSLAL--PGGPEVEWVLEEIVEGIAEACREAGVPLV 81
                          90       100
                  ....*....|....*....|....*..
gi 1071575466 537 SGNVSLYNEtdgtGIYPTPVIGMVGLV 563
Cdd:pfam00586  82 GGDTSFDPE----GGKPTISVTAVGIV 104
PLN03206 PLN03206
phosphoribosylformylglycinamidine synthase; Provisional
14-731 1.05e-25

phosphoribosylformylglycinamidine synthase; Provisional


Pssm-ID: 178745 [Multi-domain]  Cd Length: 1307  Bit Score: 114.09  E-value: 1.05e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466   14 QRIYQEMGLTDSEYD------LVCSILGREPnyTETGLFSVMWS--EHC------------------------------- 54
Cdd:PLN03206   168 EEINKEMGLAFDEQDldyytrLFRDDIKRDP--TNVELFDIAQSnsEHSrhwffsgklvidgqpmpktlfqmvkdtlkan 245
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466   55 ------SYKNSKPVLRKFPTEGKQVLQgPGEGAGIVDIGDGLGVAFKVESHNHPSYVEPYQGAATGVGGIIRDVFS--MG 126
Cdd:PLN03206   246 pnnsviGFKDNSSAIRGFVVQPLRPVS-PGSPSPLAPVDRDLDILLTAETHNFPCAVAPYPGAETGAGGRIRDTHAtgRG 324
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  127 ARPIA-----MLNSLRFGELDTPH-----------AKYLVSEVVA--GIAGYGNSIGIPTVGGeiqfdpcYTKN------ 182
Cdd:PLN03206   325 SFVVAgtagyCVGNLRIEGSYAPWedssfvypsnlASPLQILIDAsnGASDYGNKFGEPLIQG-------YTRTfgmrlp 397
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  183 ---------PLVNAMCVGLIEAKDIQKGQAKgIGNPVMYVGAKTGRDGIHGATFAS-VEFSEEGEQQRSAVQVGDPFME- 251
Cdd:PLN03206   398 ngerrewlkPIMFSGGIGQIDHTHLTKGEPD-IGMLVVKIGGPAYRIGMGGGAASSmVSGQNDAELDFNAVQRGDAEMSq 476
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  252 KL--LLEACLDvIRDHSDIlVGIQDMGAAGLVSSSSEMASKAGAglELIMDDVPQRELHMTPYEMLLSESQERMLLCVKK 329
Cdd:PLN03206   477 KLyrVVRACVE-MGEDNPI-VSIHDQGAGGNCNVVKEIIYPKGA--EIDIRAVVVGDHTLSVLEIWGAEYQEQDALLIKP 552
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  330 GHVEEIQALFERYGLEAVVIGQVTDDKMYKIIH----HGEVVANVPVDALAEDAPVYHKPSKEPAR-----YQAFQEEEA 400
Cdd:PLN03206   553 ESRDLLQSICDRERCSMAVIGTIDGSGRVVLVDsaapEKCEANGLPPPPPAVDLDLEKVLGDMPQKtfefkRVANKLEPL 632
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  401 FVPVIDDVVGVWKELLAQPTIASKRHIYEQYDyqvRTDTAVV-----------PGSDAAIvrvrgtekaIAMT------- 462
Cdd:PLN03206   633 DIPPGITVMDALKRVLRLPSVCSKRFLTTKVD---RCVTGLVaqqqtvgplqiPLADVAV---------IAQThtgltgg 700
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  463 -TDCNSRYL--YLDPEVGGAIAVAEAARNIVCSggKPLAITDGLNFGNpekpeifW-----------EIEKAADGISAAC 528
Cdd:PLN03206   701 aCAIGEQPIkgLVDPKAMARLAVGEALTNLVWA--KVTALSDVKASGN-------WmyaakldgegaDMYDAAVALRDAM 771
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  529 LELDTPVISGNVSLYNETDGTG-IYPTP---VIGMVGLVEDLAHITTQDFKASGDVIFL---IGETKAEYSGSELQKIqQ 601
Cdd:PLN03206   772 IELGVAIDGGKDSLSMAAQAGGeVVKAPgnlVISAYVTCPDITKTVTPDLKLGDDGVLLhvdLGKGKRRLGGSALAQA-Y 850
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  602 GKISGRAPELDLVTEKK-----YQQLlltaIQEGLVASSHDLAEGGFGVALAEATFKAGLGADVEVPF----ALSQLFSE 672
Cdd:PLN03206   851 DQIGDDCPDLDDVAYLKkafeaTQDL----IAKRLISAGHDISDGGLVVTLLEMAFAGNCGINVDLPSsghsAFETLFAE 926
                          810       820       830       840       850       860
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1071575466  673 SQSrFLVSVKPENEAAFAQLMELEKV--YRLGVVTADETIRVKHKEDL-VTVKTTELRSIWE 731
Cdd:PLN03206   927 ELG-LVLEVSRKNLDAVMEKLAAAGVtaEVIGQVTASPLIEVKVDGATcLSEKTASLRDMWE 987
PurL_repeat1 cd02203
PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat. ...
476-719 3.26e-23

PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat. FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway. In eukaryotes and Gram-negative bacteria, FGAR-AT is encoded by the purL gene as a multidomain protein with a molecular mass of about 140 kDa. In Gram-positive bacteria and archaea FGAR-AT is a complex of three proteins: PurS, PurL, and PurQ. PurL itself contains two tandem N- and C-terminal domains (four domains altogether). The N-terminal domains bind ATP and are related to the ATP-binding domains of HypE, ThiL, SelD and PurM.


Pssm-ID: 100034 [Multi-domain]  Cd Length: 313  Bit Score: 101.01  E-value: 3.26e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 476 VGGAIavaeaaRNIVCSGGKPLAITDGLNFGNPEKPEIF--------WEIEKAADGISAACLELDTPVISGNVSLYNETD 547
Cdd:cd02203    51 VGGII------RDILSMGARPIALLDGLRFGDLDIPGYEpkgklsprRILDGVVAGISDYGNCIGIPTVGGEVRFDPSYY 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 548 GTGIyptpVIGM-VGLVEDlAHITTQDFKASGDVIFLIG-------------------ETKAEYSGSELQKiqqgkisGR 607
Cdd:cd02203   125 GNPL----VNVGcVGIVPK-DHIVKSKAPGPGDLVVLVGgrtgrdgiggatfsskelsENSSELDRPAVQV-------GD 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 608 APeldlvTEKKYQQLLLTAIQEGLVASSHDLAEGGFGVALAEATFKAGLGADVE---VPFA---LSQ---LFSESQSRFL 678
Cdd:cd02203   193 PF-----MEKKLQEAILEARETGLIVGIQDLGAGGLSSAVSEMAAKGGLGAEIDldkVPLRepgMSPweiWISESQERML 267
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1071575466 679 VSVKPENEAAFAQLMELEKV--YRLGVVTADETIRVKHKEDLV 719
Cdd:cd02203   268 LVVPPEDLEEFLAICKKEDLeaAVIGEVTDDGRLRLYYKGEVV 310
FGAR-AT_linker pfam18072
Formylglycinamide ribonucleotide amidotransferase linker domain; This is the linker domain ...
11-57 5.58e-20

Formylglycinamide ribonucleotide amidotransferase linker domain; This is the linker domain found in Formylglycinamide ribonucleotide amidotransferase (FGAR-AT), also known as Phosphoribosylformylglycinamidine synthase (EC:6.3.5.3), PurL and formylglycinamidine ribonucleotide (FGAM) synthase. This enzyme catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, Pi, and glutamate in the fourth step of the purine biosynthetic pathway. The structure analysis of Salmonella typhimurium FGAR-AT reveals that this linker domain is made up of a long hydrophilic belt with an extended conformation.


Pssm-ID: 465632 [Multi-domain]  Cd Length: 50  Bit Score: 83.67  E-value: 5.58e-20
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1071575466  11 IKEQRIYQEMGLTDSEYDLVCSI---LGREPNYTETGLFSVMWSEHCSYK 57
Cdd:pfam18072   1 LEEANRYLGLALSDDEIDYLVEYfagLGRNPTDVELGMFAQMWSEHCRHK 50
PurM-like cd00396
AIR (aminoimidazole ribonucleotide) synthase related protein. This family includes Hydrogen ...
458-692 3.76e-18

AIR (aminoimidazole ribonucleotide) synthase related protein. This family includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM (formylglycinamidine ribonucleotide) synthase and Selenophosphate synthetase (SelD). The N-terminal domain of AIR synthase forms the dimer interface of the protein, and is suggested as a putative ATP binding domain.


Pssm-ID: 100027 [Multi-domain]  Cd Length: 222  Bit Score: 83.98  E-value: 3.76e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 458 AIAMTTDCNSRYLYLDPEVGGAIAVAEAARNIVCSGGKPLAITDGLNFGNPEKPEIfweIEKAADGISAACLELDTPVIS 537
Cdd:cd00396     1 SLAMSTDGINPPLAINPWAGGRLAVGGAVNDIAAMGARPIALLASLSLSNGLEVDI---LEDVVDGVAEACNQLGVPIVG 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 538 GNVSLYneTDGTGIYPTPVIGMVGLVEDLAHITTQDFKAsGDVIFLIGetkaeysgselqkiqqgkisgrapeldlvtek 617
Cdd:cd00396    78 GHTSVS--PGTMGHKLSLAVFAIGVVEKDRVIDSSGARP-GDVLILTG-------------------------------- 122
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 618 kyQQLLLTAIQEGLVASSHDLAEGGFGVALAEATFKAGLGADVE--------------VPFALSQLFSESQSRFLVSVKP 683
Cdd:cd00396   123 --VDAVLELVAAGDVHAMHDITDGGLLGTLPELAQASGVGAEIDleaipldevvrwlcVEHIEEALLFNSSGGLLIAVPA 200

                  ....*....
gi 1071575466 684 ENEAAFAQL 692
Cdd:cd00396   201 EEADAVLLL 209
PurL cd02193
Formylglycinamide ribonucleotide amidotransferase (FGAR-AT) catalyzes the ATP-dependent ...
459-692 1.38e-15

Formylglycinamide ribonucleotide amidotransferase (FGAR-AT) catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway. In eukaryotes and Gram-negative bacteria, FGAR-AT is encoded by the purL gene as a multidomain protein with a molecular mass of about 140 kDa. In Gram-positive bacteria and archaea FGAR-AT is a complex of three proteins: PurS, PurL, and PurQ. PurL itself contains two tandem N- and C-terminal domains (four domains altogether). The N-terminal domains bind ATP and are related to the ATP-binding domains of HypE, ThiL, SelD and PurM.


Pssm-ID: 100029 [Multi-domain]  Cd Length: 272  Bit Score: 77.72  E-value: 1.38e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 459 IAMTTDCNSRYLYLDPEVGGAIAVAEAARNIVCSG--GKPLAITDGL--NFGNPEKPEIFWEIEKaadGISAACLELDTP 534
Cdd:cd02193     3 EAMKIEEHNHPAAIDPAAGAATGVGGAIRDIAATGidAKPIALSANWmaSAGHPGEDAILYDAVK---GVAELCNQLGLP 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 535 VISGNVSLYNETDGTGIY--------PTPVIGMVGLVEDLAHittQDFKAS--GDVIFLIGETK---AEYSGSELQKIQQ 601
Cdd:cd02193    80 IPVGKDRMSMKTRWQEGNeqremthpPSLVISAFGRVRDDRH---TLPQLSteGNALLLIGGGKghnGLGGTALASVALS 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 602 GKISGRAP--ELDLVTEKKYQQLLLTAIQEGLVASSHDLAEGGFGVALAEATFKAGLGADVEVPFALSQ---------LF 670
Cdd:cd02193   157 YRQLGDKSaqVRDPAQEKGFYEAMQALVAAGKLLAWHDRGAGGLLVALAELVFAGHCGVQVDLAALGDDepdmepleiAL 236
                         250       260
                  ....*....|....*....|..
gi 1071575466 671 SESQSRFLVSVKPENEAAFAQL 692
Cdd:cd02193   237 FESQERGVIQVRAEDRDAVEEA 258
AIRS_C pfam02769
AIR synthase related protein, C-terminal domain; This family includes Hydrogen expression ...
578-714 1.91e-14

AIR synthase related protein, C-terminal domain; This family includes Hydrogen expression/formation protein HypE, AIR synthases EC:6.3.3.1, FGAM synthase EC:6.3.5.3 and selenide, water dikinase EC:2.7.9.3. The function of the C-terminal domain of AIR synthase is unclear, but the cleft formed between N and C domains is postulated as a sulphate binding site.


Pssm-ID: 460684 [Multi-domain]  Cd Length: 152  Bit Score: 71.22  E-value: 1.91e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 578 GDVIFLIGEtkaeySG------SELQKIQQGKISGRAPELDLVTEKKYQQLLLTAIQ-EGLVASSHDLAEGGFGVALAEA 650
Cdd:pfam02769   3 GDVLILLGS-----SGlhgaglSLSRKGLEDSGLAAVQLGDPLLEPTLIYVKLLLAAlGGLVKAMHDITGGGLAGALAEM 77
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1071575466 651 TFKAGLGADVEVP---------FALSQLFSESQSRFLVSVKPENEAAFAQLMELE--KVYRLGVVTADETIRVKH 714
Cdd:pfam02769  78 APASGVGAEIDLDkvpifeelmLPLEMLLSENQGRGLVVVAPEEAEAVLAILEKEglEAAVIGEVTAGGRLTVIV 152
PurL_repeat2 cd02204
PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), second repeat. ...
81-352 3.09e-14

PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), second repeat. FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway. In eukaryotes and Gram-negative bacteria, FGAR-AT is encoded by the purL gene as a multidomain protein with a molecular mass of about 140 kDa. In Gram-positive bacteria and archaea FGAR-AT is a complex of three proteins: PurS, PurL, and PurQ. PurL itself contains two tandem N- and C-terminal domains (four domains altogether). The N-terminal domains bind ATP and are related to the ATP-binding domains of HypE, ThiL, SelD and PurM.


Pssm-ID: 100035 [Multi-domain]  Cd Length: 264  Bit Score: 73.34  E-value: 3.09e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  81 AGIVDI--GDGLGVAFKVESHNHPSYVEPYQGAATGVGGIIRDVFSMGARPIAMLNSLRFGELDTPHAKY--LVsEVVAG 156
Cdd:cd02204     2 AAVLRIpgETDKGLAMSTGENPRYSLLDPYAGAALAVAEAVRNLVAVGADPLAITDCLNFGNPEKPEGEMgqLV-EAVLG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 157 IAGYGNSIGIPTVGGEIQFdpcYTKNPLVNAM------CVGLIEAKDIQKGQA-KGIGNPVMYVGAKTGRDGihGATFAS 229
Cdd:cd02204    81 LGDACRALGTPVIGGKDSL---YNETEGVAIPptlvigAVGVVDDVRKIVTLDfKKEGDLLYLIGETKDELG--GSEYAL 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 230 VEFSEEGEqqrsAVQVGDPFMEKLLLEACLDVIRDHsdILVGIQDMGAAGLVSSSSEMASKAGAGLELIMDDVPqrelhm 309
Cdd:cd02204   156 AYHGLGGG----APPLVDLEREKALFDAVQELIKEG--LVLSAHDVSDGGLAVALAEMAFAGGLGAEVDLSKDD------ 223
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1071575466 310 TPYEMLLSESQERMLLCVKKGHVEEIQAlfERYGLEAVVIGQV 352
Cdd:cd02204   224 AEDELLFSESLGRVLVEVKPENEEVFEA--EEAGVPATVIGTV 264
PHA03366 PHA03366
FGAM-synthase; Provisional
472-730 1.27e-12

FGAM-synthase; Provisional


Pssm-ID: 223058 [Multi-domain]  Cd Length: 1304  Bit Score: 71.59  E-value: 1.27e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  472 LDPEVGGAIAVAEAARNIVCSGGKPLA-ITDGLNFGNPEKPEIFWEIEKAADGISAACLELdtpvisgNVSLY------N 544
Cdd:PHA03366   704 LDPILGAKYAIVEALTNLMLAPVANLEdITITLSVTWPPTDQAASELYRALAACKEFCREL-------GVNFTftsassS 776
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  545 ETDGTGIYPTPVIGMV-----GLVEDLAHITTQDFKASGDVIFLIG-ETKAEYSGSELQKIQqGKISGRAPELDLVTEKK 618
Cdd:PHA03366   777 PRQDQPPQPGPLFNTIvftasAPVPSSTPRLTPDLKKPGSALVHLSiSPEYTLAGSVFEQIF-GLKSGTLPDISPSYLKN 855
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  619 YQQLLLTAIQEGLVASSHDLAEGGFGVALAEATFKAGLGADVEVPF---ALSQLFSESQSrFLVSVKPENEAA---FAQL 692
Cdd:PHA03366   856 LFRAVQHLISEGLVVSGHDVSDGGLIACLAEMALAGGRGVTITVPAgedPLQFLFSETPG-VVIEVPPSHLSAvltRLRS 934
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|..
gi 1071575466  693 MELEkVYRLGVV---TADETIRVKHK-EDLVTVKTTELRSIW 730
Cdd:PHA03366   935 RNII-CYPIGTVgpsGPSNTFSVSHNgTVLFRESLSSLRSTW 975
PurM-like1 cd06061
AIR synthase (PurM) related protein, subgroup 1 of unknown function. The family of PurM ...
444-661 3.58e-09

AIR synthase (PurM) related protein, subgroup 1 of unknown function. The family of PurM related proteins includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM synthase and Selenophosphate synthetase (SelD). They all contain two conserved domains and seem to dimerize. The N-terminal domain forms the dimer interface and is a putative ATP binding domain.


Pssm-ID: 100037 [Multi-domain]  Cd Length: 298  Bit Score: 58.76  E-value: 3.58e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 444 GSDAAIVRVrgTEKAIAMTTDCnsryLYLDPEVGGAIAVAEAARNIVCSGGKPLAITDGLNF--GNPEKpeifwEIEKAA 521
Cdd:cd06061    32 GEDAAVVDF--GGKVLVVSTDP----ITGAGKDAGWLAVHIAANDIATSGARPRWLLVTLLLppGTDEE-----ELKAIM 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 522 DGISAACLELDTPVISGNvslynetdgTGIYPT---PVIG--MVGLVEDLAHITTQDFKAsGDVIFLIGETKAEYSGSeL 596
Cdd:cd06061   101 REINEAAKELGVSIVGGH---------TEVTPGvtrPIISvtAIGKGEKDKLVTPSGAKP-GDDIVMTKGAGIEGTAI-L 169
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1071575466 597 QKIQQGKISGRAPELDLVTEKKYQqLLLTAIQEGLVA------SSHDLAEGGFGVALAEATFKAGLGADVE 661
Cdd:cd06061   170 ANDFEEELKKRLSEEELREAAKLF-YKISVVKEALIAaeagvtAMHDATEGGILGALWEVAEASGVGLRIE 239
PRK14090 PRK14090
phosphoribosylformylglycinamidine synthase subunit PurL;
472-719 4.60e-07

phosphoribosylformylglycinamidine synthase subunit PurL;


Pssm-ID: 184499 [Multi-domain]  Cd Length: 601  Bit Score: 53.32  E-value: 4.60e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 472 LDPEVGGAIAVAEAARNIVCSGGKPLAITDGLNFGNPekpeifweIEKAADGISAACLELDTPVISGNVSLyneTDGTGI 551
Cdd:PRK14090   76 IEPYNGAATGVGGIIRDVLAMGARPTAIFDSLHMSRI--------IDGIIEGIADYGNSIGVPTVGGELRI---SSLYAH 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 552 YPTPVIGMVGLVEDlAHITTQDFKASGDVIFLIGETK-------AEYSGSELQKIQQGKISGRAPelDLVTEKKYQQLLL 624
Cdd:PRK14090  145 NPLVNVLAAGVVRN-DMLVDSKASRPGQVIVIFGGATgrdgihgASFASEDLTGEKATKLSIQVG--DPFAEKMLIEAFL 221
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 625 TAIQEGLVASSHDLAEGGFGVALAEATFKAGLGADVE---VPF------ALSQLFSESQSRFLVSVKPENEAAFAQLMEL 695
Cdd:PRK14090  222 EMVEEGLVEGAQDLGAGGVLSATSELVAKGGLGAIVHldrVPLrepdmePWEILISESQERMAVVTSPEKASRILEIAKK 301
                         250       260
                  ....*....|....*....|....*.
gi 1071575466 696 EKVYR--LGVVTADETIRVKHKEDLV 719
Cdd:PRK14090  302 HLLFGdiVAEVIDDPIYRVMYRDDLV 327
PHA03366 PHA03366
FGAM-synthase; Provisional
266-377 6.03e-07

FGAM-synthase; Provisional


Pssm-ID: 223058 [Multi-domain]  Cd Length: 1304  Bit Score: 53.10  E-value: 6.03e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  266 SDILVGIQDMGAAGLVSSSSEMASKAGAGLELimdDVPQRElhmTPYEMLLSESQErMLLCVKKGHVEEIQALFERYGLE 345
Cdd:PHA03366   866 EGLVVSGHDVSDGGLIACLAEMALAGGRGVTI---TVPAGE---DPLQFLFSETPG-VVIEVPPSHLSAVLTRLRSRNII 938
                           90       100       110
                   ....*....|....*....|....*....|....*
gi 1071575466  346 AVVIGQV---TDDKMYKIIHHGEVVANVPVDALAE 377
Cdd:PHA03366   939 CYPIGTVgpsGPSNTFSVSHNGTVLFRESLSSLRS 973
SelD cd02195
Selenophosphate synthetase (SelD) catalyzes the conversion of selenium to selenophosphate ...
73-352 1.35e-06

Selenophosphate synthetase (SelD) catalyzes the conversion of selenium to selenophosphate which is required by a number of bacterial, archaeal and eukaryotic organisms for synthesis of Secys-tRNA, the precursor of selenocysteine in selenoenzymes. The N-terminal domain of SelD is related to the ATP-binding domains of hydrogen expression/formation protein HypE, the AIR synthases, and FGAM synthase and is thought to bind ATP.


Pssm-ID: 100031 [Multi-domain]  Cd Length: 287  Bit Score: 50.60  E-value: 1.35e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  73 VLQGPGEGAGIVDIGDGLGVafkVESHNH-PSYVE-PY-QG--AATGVggiIRDVFSMGARPIAMLNSLRFGELDTPHAK 147
Cdd:cd02195    36 VGLGTGDDAAVYRLPGGLAL---VQTTDFfPPIVDdPYlFGriAAANA---LSDIYAMGAKPLSALAIVTLPRKLPALQE 109
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 148 YLVSEVVAGiagyGNSI----GIPTVGG------EIQFdpcytknplvnAMCV-GLIEAKDI------QKGQA----KGI 206
Cdd:cd02195   110 EVLREILAG----GKDKlreaGAVLVGGhtiegpEPKY-----------GLSVtGLVHPNKIlrnsgaKPGDVliltKPL 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 207 GNPVMYVGAKTGRdgIHGATFASVefSEEGEQ-QRSAVQvgdpFMEKLLLEACLDVirdhsdilVGIqdmgaaGLVSSSS 285
Cdd:cd02195   175 GTGILFAAEMAGL--ARGEDIDAA--LESMARlNRAAAE----LLRKYGAHACTDV--------TGF------GLLGHLL 232
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1071575466 286 EMASKAGAGLELIMDDVPqreLHMT--PyemllsesqerMLLCVKKGHVEEIQALFERYGLEAVVIGQV 352
Cdd:cd02195   233 EMARASGVSAEIDLDKLP---LLQTsgG-----------LLAAVPPEDAAALLALLKAGGPPAAIIGEV 287
PurM-like3 cd02192
AIR synthase (PurM) related protein, subgroup 3 of unknown function. The family of PurM ...
101-350 7.53e-06

AIR synthase (PurM) related protein, subgroup 3 of unknown function. The family of PurM related proteins includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM synthase and Selenophosphate synthetase (SelD). They all contain two conserved domains and seem to dimerize. The N-terminal domain forms the dimer interface and is a putative ATP binding domain.


Pssm-ID: 100028 [Multi-domain]  Cd Length: 283  Bit Score: 48.36  E-value: 7.53e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 101 HPSYVE--PYQGAATGVGGIIRDVFSMGARPIAMLNSLRFGelDTPHAKylvsEVVAGIAGYGNSIGIPTVGGEIQFDPC 178
Cdd:cd02192    56 WPSLVEadPWWAGYCSVLVNVSDIAAMGGRPLAMVDALWSP--SAEAAA----QVLEGMRDAAEKFGVPIVGGHTHPDSP 129
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 179 YtknplvNAMCVGLIeakdiqkGQAKGignPVMYV-GAKTGrDGIHGATFASVEFSEEGEQQRSAVQVGDPfmeklllea 257
Cdd:cd02192   130 Y------NALSVAIL-------GRARK---DLLISfGAKPG-DRLILAIDLDGRVHPSPPPNWDATTMKSP--------- 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 258 clDVIRDHSDILVGI---------QDMGAAGLVSSSSEMASKAGAGLELIMDDVP-------QRELHMTP-YEMLLSesq 320
Cdd:cd02192   184 --ALLRRQIALLPELaerglvhaaKDISNPGIIGTLGMLLEASGVGAEIDLDAIPrpegvdlERWLKCFPgFGFLLT--- 258
                         250       260       270
                  ....*....|....*....|....*....|
gi 1071575466 321 ermllcVKKGHVEEIQALFERYGLEAVVIG 350
Cdd:cd02192   259 ------ARPENADEVVAVFAAVGITAAVIG 282
PurM-like2 cd02691
AIR synthase (PurM) related protein, archaeal subgroup 2 of unknown function. The family of ...
72-371 2.69e-04

AIR synthase (PurM) related protein, archaeal subgroup 2 of unknown function. The family of PurM related proteins includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM synthase and Selenophosphate synthetase (SelD). They all contain two conserved domains and seem to dimerize. The N-terminal domain forms the dimer interface and is a putative ATP binding domain.


Pssm-ID: 100036  Cd Length: 346  Bit Score: 43.92  E-value: 2.69e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466  72 QVLQGPGEGAGIVDIGDGLGVAFKVES--------HNHPSYVePYQGAATGVGGIIRDVFSMGARPIAMLNSLRFGElDT 143
Cdd:cd02691    22 ELIGKTGEVSIVAQDDDAGVDAADVEYivvaidgiHSRLSDF-PFLAGFHATRAALRDVMVMGARPVALLSDIHLAD-DG 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 144 PHAKYLvsEVVAGIAGYGNSIGIPTVGG---EIQFDpCYTKNPLVNAM-CVGLIEAKDIQKGQAKGIGNPVMYVGAKTGR 219
Cdd:cd02691   100 DVGKLF--DFTAGVTAVSEATGVPLVAGstlRIGGD-MVLGDRLVGGVgAVGRSKSDPSRRKNAEPGDLILMTEGAGGGT 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 220 DGIHGATFASVEFSEEgeqqrsAVQVGDpfmekllLEACLDVIRDHSDILV-GIQDMGAAGLVSSSSEMASKAGAGLELI 298
Cdd:cd02691   177 ITTTAIYHGMPDVVEE------TLNVDF-------IKACEALRDSGLVSKVhSMTDVTNGGIRGDALEISKTAGVSLVFD 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1071575466 299 MDDVpQRELHMTPYEML-------LSESQERMLLCVKKGHVEEIQALFERYGLEAVVIGQVTDDKMYKIIHHGEVVANVP 371
Cdd:cd02691   244 EEKV-RSLINPKVLKMLeelgidpLGVSLDSLMIIAPEEDAVDIIRTLREAGVRADEVGRVEEGRGVPLVVTGEGRELKP 322
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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