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Conserved domains on  [gi|1050394675|gb|OCT96865|]
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hypothetical protein XELAEV_18009081mg [Xenopus laevis]

Protein Classification

5-(carboxyamino)imidazole ribonucleotide mutase; phosphoribosylaminoimidazolesuccinocarboxamide synthase( domain architecture ID 10105473)

5-(carboxyamino)imidazole ribonucleotide mutase (PurE) catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)| phosphoribosylaminoimidazolesuccinocarboxamide synthase catalyzes the conversion of 5-aminoimidazole-4-carboxyribonucleotide (CAIR) to 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) in the de novo biosynthesis of purine nucleotides

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
SAICAR_synt_Ade5 cd01416
Ade5_like 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase; ...
7-258 0e+00

Ade5_like 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase; Eukaryotic group of SAICAR synthetases represented by the Drosophila melanogaster, N-terminal, SAICAR synthetase domain of bifunctional Ade5. The Ade5 gene product (CAIR-SAICARs) catalyzes the sixth and seventh steps of the de novo biosynthesis of purine nucleotides (also reported as seventh and eighth steps). SAICAR synthetase converts 5-aminoimidazole-4-carboxyribonucleotide (CAIR), ATP, and L-aspartate into 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR), ADP, and phosphate.


:

Pssm-ID: 133471  Cd Length: 252  Bit Score: 521.47  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675   7 LKLGKKLNEGKTKEVYELPEHYGCVLMKSKDQITAGDAVRKDHMEGKASISNKTTSCVFKLLQEAGIKTAFVRKCGDTAF 86
Cdd:cd01416     1 LKLGKKLIEGKTKIVYELPDQPGLVLIQSKDRITAGDGARKDEIEGKAAISNKTTSNVFELLQEAGIKTHFVKQCSPTAF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  87 IATHCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFLPPKVETFFKDDANHDPQWSEEQLISAKLSCGGLVIGQAEVDIMT 166
Cdd:cd01416    81 IARKCEMIPIEWVCRRIATGSFLKRNPGVKEGYRFSPPKLEFFYKDDANHDPQWSEEQLLEAKLNCGGLKIGKKEVDIMT 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675 167 HSTAAIFEILEKAWMSQECTLVDMKIEFGVDVTKKEIVLADVIDNDSWRLWPAGDKSQQKDKQTYRDLKEVTAEALQMVK 246
Cdd:cd01416   161 KSTIAIFEILEKAWATQDCTLVDMKIEFGVDVTTGEILLADVIDNDSWRLWPSGDKRLMKDKQVYRNLKEVTDEALQEVK 240
                         250
                  ....*....|..
gi 1050394675 247 RNFEWVADRVEL 258
Cdd:cd01416   241 KNYEWVADKLEL 252
purE TIGR01162
phosphoribosylaminoimidazole carboxylase, PurE protein; Phosphoribosylaminoimidazole ...
268-421 2.86e-53

phosphoribosylaminoimidazole carboxylase, PurE protein; Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase. [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]


:

Pssm-ID: 273474  Cd Length: 156  Bit Score: 174.73  E-value: 2.86e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675 268 VVVLMGSISDLAHCEKIKKSCANYGLPCELRVTSAHKGPDETLRIKSEYEGDGmATVFIAVAGRSNGLGPVMSGNSAYPV 347
Cdd:TIGR01162   1 VGIIMGSDSDLPTMKKAADILEEFGIPYELRVVSAHRTPELMLEYAKTAEERG-IKVIIAGAGGAAHLPGMVAALTPLPV 79
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1050394675 348 INCP-PLTADWAAQDVWSSLRMPSGLGCSTVLSPEAAAQFAAQIF--GLNNHLVWSKLRSCTLNTWISLKQADMKLR 421
Cdd:TIGR01162  80 IGVPvPSKALSGLDSLLSIVQMPSGVPVATVAIGNAGNAALLAAQilGIKDPELAEKLKEYRENQKEEVLKKNKKLE 156
 
Name Accession Description Interval E-value
SAICAR_synt_Ade5 cd01416
Ade5_like 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase; ...
7-258 0e+00

Ade5_like 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase; Eukaryotic group of SAICAR synthetases represented by the Drosophila melanogaster, N-terminal, SAICAR synthetase domain of bifunctional Ade5. The Ade5 gene product (CAIR-SAICARs) catalyzes the sixth and seventh steps of the de novo biosynthesis of purine nucleotides (also reported as seventh and eighth steps). SAICAR synthetase converts 5-aminoimidazole-4-carboxyribonucleotide (CAIR), ATP, and L-aspartate into 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR), ADP, and phosphate.


Pssm-ID: 133471  Cd Length: 252  Bit Score: 521.47  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675   7 LKLGKKLNEGKTKEVYELPEHYGCVLMKSKDQITAGDAVRKDHMEGKASISNKTTSCVFKLLQEAGIKTAFVRKCGDTAF 86
Cdd:cd01416     1 LKLGKKLIEGKTKIVYELPDQPGLVLIQSKDRITAGDGARKDEIEGKAAISNKTTSNVFELLQEAGIKTHFVKQCSPTAF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  87 IATHCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFLPPKVETFFKDDANHDPQWSEEQLISAKLSCGGLVIGQAEVDIMT 166
Cdd:cd01416    81 IARKCEMIPIEWVCRRIATGSFLKRNPGVKEGYRFSPPKLEFFYKDDANHDPQWSEEQLLEAKLNCGGLKIGKKEVDIMT 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675 167 HSTAAIFEILEKAWMSQECTLVDMKIEFGVDVTKKEIVLADVIDNDSWRLWPAGDKSQQKDKQTYRDLKEVTAEALQMVK 246
Cdd:cd01416   161 KSTIAIFEILEKAWATQDCTLVDMKIEFGVDVTTGEILLADVIDNDSWRLWPSGDKRLMKDKQVYRNLKEVTDEALQEVK 240
                         250
                  ....*....|..
gi 1050394675 247 RNFEWVADRVEL 258
Cdd:cd01416   241 KNYEWVADKLEL 252
SAICAR_synt pfam01259
SAICAR synthetase; Also known as Phosphoribosylaminoimidazole-succinocarboxamide synthase.
12-240 6.84e-93

SAICAR synthetase; Also known as Phosphoribosylaminoimidazole-succinocarboxamide synthase.


Pssm-ID: 460140  Cd Length: 228  Bit Score: 279.25  E-value: 6.84e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  12 KLNEGKTKEVYELPEHyGCVLMKSKDQITAGDAVRKDHMEGKASISNKTTSCVFKLLQEAGIKTAFVRKCGDTAFIATHC 91
Cdd:pfam01259   1 LLYEGKVKDVYETDDP-DTLLVVAKDRISAFDGVKKGTIPGKGAVNNQISAFWFELLEIAGIPTHFIKSLSGREMLVKKV 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  92 EMIPIEWVCRRIATGSFLKRNPGVKEGYKFLPPKVETFFKDDANHDPQWSEEQLISAKLscgglvIGQAEVDIMTHSTAA 171
Cdd:pfam01259  80 KIIPLEVVVRNYAAGSLGKRLPGLKEGTKLPEPIFEPSTKADALGDPNINEEHIVALGL------ATEEEAEEIRELALK 153
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1050394675 172 IFEILEKAWMSQECTLVDMKIEFGVDVTkKEIVLADVIDNDSWRLWPAGD--KSQQK-DKQTYRD----LKEVTAE 240
Cdd:pfam01259 154 INEILKEYAAERGIILVDTKLEFGLDSD-GEIVLADEITPDSSRFWDADTyeKSQESlDKDRFRDdlgdVEEAYQE 228
PurC COG0152
Phosphoribosylaminoimidazole-succinocarboxamide synthase [Nucleotide transport and metabolism]; ...
7-245 1.85e-65

Phosphoribosylaminoimidazole-succinocarboxamide synthase [Nucleotide transport and metabolism]; Phosphoribosylaminoimidazole-succinocarboxamide synthase is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 439922  Cd Length: 245  Bit Score: 209.55  E-value: 1.85e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675   7 LKLGKKLNEGKTKEVYELPEHYgcVLMKSKDQITAGDAVRKDHMEGKASISNKTTSCVFKLLQEAGIKTAFVRKCGDTAF 86
Cdd:COG0152     1 MPKLELLYEGKVKDVYATDDDT--LLMVFKDRISAFDGVKPDPIPGKGEVLNQISAFWFELLEDIGIPTHFIETLSGREM 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  87 IATHCEMIPIEWVCRRIATGSFLKR-------NPGVKEGYKFLPPKVETFFKDDANHDPQWSEEQLISAKLscgglvIGQ 159
Cdd:COG0152    79 LVKKLEMIPVEVVVRNYAAGSLWKRyqagialPLGLEEGTKLPEPIFEPSTKADEGHDPNISEEHIVALGL------ATE 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675 160 AEVDIMTHSTAAIFEILEKAWMSQECTLVDMKIEFGVDvTKKEIVLADVIDNDSWRLWPAGDKsQQKDKQTYRD-LKEVT 238
Cdd:COG0152   153 EEAEELRELALKINERLSELAAERGIILVDTKLEFGRD-ADGEIVLADEITPDSSRLWDADTY-ESLDKDRFRDwLGGNT 230

                  ....*..
gi 1050394675 239 AEALQMV 245
Cdd:COG0152   231 SEAYIEV 237
PRK09362 PRK09362
phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed
10-260 9.89e-62

phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed


Pssm-ID: 181800  Cd Length: 238  Bit Score: 199.56  E-value: 9.89e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  10 GKKLNEGKTKEVYELPEHyGCVLMKSKDQITAGDAVRKDHMEGKASISNKTTSCVFKLLQEAGIKTAFVRKCGDTAFIAT 89
Cdd:PRK09362    4 KELLYEGKAKIVYSTDDP-DLLIVEFKDDATAFNGEKKEQIDGKGVLNNQISSFIFKKLEEAGIPTHFIEKLSDREQLVK 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  90 HCEMIPIEWVCRRIATGSFLKRNpGVKEGYKFLPPKVETFFKDDANHDPQWSEEQLISAKLscgglvIGQAEVDIMTHST 169
Cdd:PRK09362   83 KVEIIPLEVVVRNVAAGSLVKRL-GIEEGTVLPPPIVEFYYKNDALGDPMINEDHILALGW------ATPEELAEIKELA 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675 170 AAIFEILEKAWMSQECTLVDMKIEFGVDvTKKEIVLADVIDNDSWRLWpagDKSQQK--DKQTYR-DLKEVTaEAlqmvk 246
Cdd:PRK09362  156 LKINDVLKGLFAGAGIRLVDFKLEFGRD-KDGEIVLADEISPDTCRLW---DKETNEklDKDRFRrDLGGVI-EA----- 225
                         250
                  ....*....|....
gi 1050394675 247 rnFEWVADRVELLL 260
Cdd:PRK09362  226 --YEEVLKRLGELL 237
purE TIGR01162
phosphoribosylaminoimidazole carboxylase, PurE protein; Phosphoribosylaminoimidazole ...
268-421 2.86e-53

phosphoribosylaminoimidazole carboxylase, PurE protein; Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase. [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]


Pssm-ID: 273474  Cd Length: 156  Bit Score: 174.73  E-value: 2.86e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675 268 VVVLMGSISDLAHCEKIKKSCANYGLPCELRVTSAHKGPDETLRIKSEYEGDGmATVFIAVAGRSNGLGPVMSGNSAYPV 347
Cdd:TIGR01162   1 VGIIMGSDSDLPTMKKAADILEEFGIPYELRVVSAHRTPELMLEYAKTAEERG-IKVIIAGAGGAAHLPGMVAALTPLPV 79
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1050394675 348 INCP-PLTADWAAQDVWSSLRMPSGLGCSTVLSPEAAAQFAAQIF--GLNNHLVWSKLRSCTLNTWISLKQADMKLR 421
Cdd:TIGR01162  80 IGVPvPSKALSGLDSLLSIVQMPSGVPVATVAIGNAGNAALLAAQilGIKDPELAEKLKEYRENQKEEVLKKNKKLE 156
AIRC pfam00731
AIR carboxylase; Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl) ...
268-378 1.42e-44

AIR carboxylase; Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyze the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.


Pssm-ID: 459917  Cd Length: 147  Bit Score: 151.75  E-value: 1.42e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675 268 VVVLMGSISDLAHCEKIKKSCANYGLPCELRVTSAHKGPDETLRIKSEYEGDGmATVFIAVAGRSNGLGPVMSGNSAYPV 347
Cdd:pfam00731   1 VGIIMGSDSDLPVMKKAAKILKEFGIPYEVRVVSAHRTPERLLEYAKEAEERG-LKVIIAGAGGAAHLPGMVAALTTLPV 79
                          90       100       110
                  ....*....|....*....|....*....|..
gi 1050394675 348 INCPPLTADWAAQD-VWSSLRMPSGLGCSTVL 378
Cdd:pfam00731  80 IGVPVKSSALDGLDsLLSIVQMPSGVPVATVA 111
AIRC smart01001
AIR carboxylase; Members of this family catalyse the decarboxylation of 1-(5-phosphoribosyl) ...
266-403 1.32e-39

AIR carboxylase; Members of this family catalyse the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyse the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.


Pssm-ID: 214965  Cd Length: 152  Bit Score: 138.82  E-value: 1.32e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  266 GRVVVLMGSISDLAHCEKIKKSCANYGLPCELRVTSAHKGPDETLRIKSEYEGDGmATVFIAVAGRSNGLGPVMSGNSAY 345
Cdd:smart01001   1 PLVGIIMGSTSDLPVMEEAAKTLEEFGIPYEVGVASAHRTPDRLFEYAKEAEDRG-IKVIIAGAGGAAHLPGVVAALTTL 79
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1050394675  346 PVINCPPLTADWAAQD-VWSSLRMPSGLGCSTVL----SPEAAAQFAAQIFGLNNHLVWSKLR 403
Cdd:smart01001  80 PVIGVPVSSGYLGGLDsLLSIVQMPSGIPVATVAigidGAFNAALLAAQILALNDPELAAKLA 142
PurE COG0041
Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]; ...
267-330 7.15e-10

Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 439811  Cd Length: 161  Bit Score: 57.38  E-value: 7.15e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1050394675 267 RVVVLMGSISDLAHCEKIKKSCANYGLPCELRVTSAHKGPDETLRIKSEYEGDGMAtVFIAVAG 330
Cdd:COG0041     2 KVGIIMGSDSDWPTMKKAAKILDEFGIPYEVRVVSAHRTPDRLFEYAKTAEERGLK-VIIAGAG 64
PLN02948 PLN02948
phosphoribosylaminoimidazole carboxylase
267-377 9.64e-07

phosphoribosylaminoimidazole carboxylase


Pssm-ID: 178534 [Multi-domain]  Cd Length: 577  Bit Score: 50.83  E-value: 9.64e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675 267 RVVVLMGSISDLAHCEKIKKSCANYGLPCELRVTSAHKGPDETLRIKSEYEGDGMaTVFIAVAGRSNGLGPVMSGNSAYP 346
Cdd:PLN02948  412 LVGIIMGSDSDLPTMKDAAEILDSFGVPYEVTIVSAHRTPERMFSYARSAHSRGL-QVIIAGAGGAAHLPGMVASMTPLP 490
                          90       100       110
                  ....*....|....*....|....*....|..
gi 1050394675 347 VINCPPLTADWAAQD-VWSSLRMPSGLGCSTV 377
Cdd:PLN02948  491 VIGVPVKTSHLDGLDsLLSIVQMPRGVPVATV 522
 
Name Accession Description Interval E-value
SAICAR_synt_Ade5 cd01416
Ade5_like 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase; ...
7-258 0e+00

Ade5_like 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase; Eukaryotic group of SAICAR synthetases represented by the Drosophila melanogaster, N-terminal, SAICAR synthetase domain of bifunctional Ade5. The Ade5 gene product (CAIR-SAICARs) catalyzes the sixth and seventh steps of the de novo biosynthesis of purine nucleotides (also reported as seventh and eighth steps). SAICAR synthetase converts 5-aminoimidazole-4-carboxyribonucleotide (CAIR), ATP, and L-aspartate into 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR), ADP, and phosphate.


Pssm-ID: 133471  Cd Length: 252  Bit Score: 521.47  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675   7 LKLGKKLNEGKTKEVYELPEHYGCVLMKSKDQITAGDAVRKDHMEGKASISNKTTSCVFKLLQEAGIKTAFVRKCGDTAF 86
Cdd:cd01416     1 LKLGKKLIEGKTKIVYELPDQPGLVLIQSKDRITAGDGARKDEIEGKAAISNKTTSNVFELLQEAGIKTHFVKQCSPTAF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  87 IATHCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFLPPKVETFFKDDANHDPQWSEEQLISAKLSCGGLVIGQAEVDIMT 166
Cdd:cd01416    81 IARKCEMIPIEWVCRRIATGSFLKRNPGVKEGYRFSPPKLEFFYKDDANHDPQWSEEQLLEAKLNCGGLKIGKKEVDIMT 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675 167 HSTAAIFEILEKAWMSQECTLVDMKIEFGVDVTKKEIVLADVIDNDSWRLWPAGDKSQQKDKQTYRDLKEVTAEALQMVK 246
Cdd:cd01416   161 KSTIAIFEILEKAWATQDCTLVDMKIEFGVDVTTGEILLADVIDNDSWRLWPSGDKRLMKDKQVYRNLKEVTDEALQEVK 240
                         250
                  ....*....|..
gi 1050394675 247 RNFEWVADRVEL 258
Cdd:cd01416   241 KNYEWVADKLEL 252
SAICAR_synt cd00476
5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase; SAICAR synthetase ...
12-257 1.04e-95

5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase; SAICAR synthetase (the PurC gene product) catalyzes the seventh step of the de novo biosynthesis of purine nucleotides (also reported as eighth step). It converts 5-aminoimidazole-4-carboxyribonucleotide (CAIR), ATP, and L-aspartate into 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR), ADP, and phosphate.


Pssm-ID: 133468  Cd Length: 230  Bit Score: 286.67  E-value: 1.04e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  12 KLNEGKTKEVYELPEHYgcVLMKSKDQITAGDAVRKDHMEGKASISNKTTSCVFKLLQEAGIKTAFVRKCGDTAFIATHC 91
Cdd:cd00476     1 TLYRGKTKIVYETKDGV--LLLEFKDDISAGDGARRNFLDEKGDITAKLTLFIFKYLSEAGIPTHFVERLGPRTLLVDKL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  92 EMIPIEWVCRRIATGSFLKRNPGVKEGYKFLPPKVETFFKDDANHDPQWSEEQLISAKlscgglVIGQAEVDIMTHSTAA 171
Cdd:cd00476    79 K*IPLEVVVRNRATGSFVKRYGGFKEGREFPPPLVEFFYKDDAEHDPIVSEDQLERLG------FIGKVDVER*KELAVK 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675 172 IFEILEKAWMSQECTLVDMKIEFGVDVtKKEIVLADVIDNDSWRLWPAGDKSQQKDKQTYRDlkevtaeALQMVKRNFEW 251
Cdd:cd00476   153 INTVLKKLFSPAGLELWDFKLEFGLDE-EGEIVLGDEISPDSSRLWRKGGEPYDKDLFRRRA-------SLGQIIEKYEE 224

                  ....*.
gi 1050394675 252 VADRVE 257
Cdd:cd00476   225 VAELVR 230
SAICAR_synt pfam01259
SAICAR synthetase; Also known as Phosphoribosylaminoimidazole-succinocarboxamide synthase.
12-240 6.84e-93

SAICAR synthetase; Also known as Phosphoribosylaminoimidazole-succinocarboxamide synthase.


Pssm-ID: 460140  Cd Length: 228  Bit Score: 279.25  E-value: 6.84e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  12 KLNEGKTKEVYELPEHyGCVLMKSKDQITAGDAVRKDHMEGKASISNKTTSCVFKLLQEAGIKTAFVRKCGDTAFIATHC 91
Cdd:pfam01259   1 LLYEGKVKDVYETDDP-DTLLVVAKDRISAFDGVKKGTIPGKGAVNNQISAFWFELLEIAGIPTHFIKSLSGREMLVKKV 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  92 EMIPIEWVCRRIATGSFLKRNPGVKEGYKFLPPKVETFFKDDANHDPQWSEEQLISAKLscgglvIGQAEVDIMTHSTAA 171
Cdd:pfam01259  80 KIIPLEVVVRNYAAGSLGKRLPGLKEGTKLPEPIFEPSTKADALGDPNINEEHIVALGL------ATEEEAEEIRELALK 153
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1050394675 172 IFEILEKAWMSQECTLVDMKIEFGVDVTkKEIVLADVIDNDSWRLWPAGD--KSQQK-DKQTYRD----LKEVTAE 240
Cdd:pfam01259 154 INEILKEYAAERGIILVDTKLEFGLDSD-GEIVLADEITPDSSRFWDADTyeKSQESlDKDRFRDdlgdVEEAYQE 228
PurC COG0152
Phosphoribosylaminoimidazole-succinocarboxamide synthase [Nucleotide transport and metabolism]; ...
7-245 1.85e-65

Phosphoribosylaminoimidazole-succinocarboxamide synthase [Nucleotide transport and metabolism]; Phosphoribosylaminoimidazole-succinocarboxamide synthase is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 439922  Cd Length: 245  Bit Score: 209.55  E-value: 1.85e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675   7 LKLGKKLNEGKTKEVYELPEHYgcVLMKSKDQITAGDAVRKDHMEGKASISNKTTSCVFKLLQEAGIKTAFVRKCGDTAF 86
Cdd:COG0152     1 MPKLELLYEGKVKDVYATDDDT--LLMVFKDRISAFDGVKPDPIPGKGEVLNQISAFWFELLEDIGIPTHFIETLSGREM 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  87 IATHCEMIPIEWVCRRIATGSFLKR-------NPGVKEGYKFLPPKVETFFKDDANHDPQWSEEQLISAKLscgglvIGQ 159
Cdd:COG0152    79 LVKKLEMIPVEVVVRNYAAGSLWKRyqagialPLGLEEGTKLPEPIFEPSTKADEGHDPNISEEHIVALGL------ATE 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675 160 AEVDIMTHSTAAIFEILEKAWMSQECTLVDMKIEFGVDvTKKEIVLADVIDNDSWRLWPAGDKsQQKDKQTYRD-LKEVT 238
Cdd:COG0152   153 EEAEELRELALKINERLSELAAERGIILVDTKLEFGRD-ADGEIVLADEITPDSSRLWDADTY-ESLDKDRFRDwLGGNT 230

                  ....*..
gi 1050394675 239 AEALQMV 245
Cdd:COG0152   231 SEAYIEV 237
PRK09362 PRK09362
phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed
10-260 9.89e-62

phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed


Pssm-ID: 181800  Cd Length: 238  Bit Score: 199.56  E-value: 9.89e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  10 GKKLNEGKTKEVYELPEHyGCVLMKSKDQITAGDAVRKDHMEGKASISNKTTSCVFKLLQEAGIKTAFVRKCGDTAFIAT 89
Cdd:PRK09362    4 KELLYEGKAKIVYSTDDP-DLLIVEFKDDATAFNGEKKEQIDGKGVLNNQISSFIFKKLEEAGIPTHFIEKLSDREQLVK 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  90 HCEMIPIEWVCRRIATGSFLKRNpGVKEGYKFLPPKVETFFKDDANHDPQWSEEQLISAKLscgglvIGQAEVDIMTHST 169
Cdd:PRK09362   83 KVEIIPLEVVVRNVAAGSLVKRL-GIEEGTVLPPPIVEFYYKNDALGDPMINEDHILALGW------ATPEELAEIKELA 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675 170 AAIFEILEKAWMSQECTLVDMKIEFGVDvTKKEIVLADVIDNDSWRLWpagDKSQQK--DKQTYR-DLKEVTaEAlqmvk 246
Cdd:PRK09362  156 LKINDVLKGLFAGAGIRLVDFKLEFGRD-KDGEIVLADEISPDTCRLW---DKETNEklDKDRFRrDLGGVI-EA----- 225
                         250
                  ....*....|....
gi 1050394675 247 rnFEWVADRVELLL 260
Cdd:PRK09362  226 --YEEVLKRLGELL 237
SAICAR_synt_PurC cd01415
bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) ...
12-246 4.85e-60

bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase; A subfamily of SAICAR synthetases represented by the Thermotoga maritima (Tm) enzyme and E. coli PurC. SAICAR synthetase catalyzes the seventh step of the de novo biosynthesis of purine nucleotides (also reported as eighth step). It converts 5-aminoimidazole-4-carboxyribonucleotide (CAIR), ATP, and L-aspartate into 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR), ADP, and phosphate.


Pssm-ID: 133470  Cd Length: 230  Bit Score: 194.98  E-value: 4.85e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  12 KLNEGKTKEVYELPEHyGCVLMKSKDQITAGDAVRKDHMEGKASISNKTTSCVFKLLQEAGIKTAFVRKCGDTAFIATHC 91
Cdd:cd01415     1 LLYEGKAKIVYATDDP-DVLIVEFKDDATAFNGKKKDTIEGKGVLNNEISALIFKYLEENGIKTHFIEKLSDREQLVKKV 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  92 EMIPIEWVCRRIATGSFLKRNpGVKEGYKFLPPKVETFFKDDANHDPQWSEEQLISAKLscgglvIGQAEVDIMTHSTAA 171
Cdd:cd01415    80 EIIPLEVVVRNIAAGSLVKRL-GIEEGTVLDPPIVEFYYKNDELGDPLINEDHILALGL------ATEEELKEIKELALK 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675 172 IFEILEKAWMSQECTLVDMKIEFGVDvTKKEIVLADVIDNDSWRLWpagDKSQQK--DKQTYR----DLKEVTAEALQMV 245
Cdd:cd01415   153 INEVLSEFFAEIGIILVDFKLEFGRD-KDGEIVLADEISPDTCRLW---DKETGEklDKDRFRrdlgDVIEAYEEVLKRL 228

                  .
gi 1050394675 246 K 246
Cdd:cd01415   229 G 229
purE TIGR01162
phosphoribosylaminoimidazole carboxylase, PurE protein; Phosphoribosylaminoimidazole ...
268-421 2.86e-53

phosphoribosylaminoimidazole carboxylase, PurE protein; Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase. [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]


Pssm-ID: 273474  Cd Length: 156  Bit Score: 174.73  E-value: 2.86e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675 268 VVVLMGSISDLAHCEKIKKSCANYGLPCELRVTSAHKGPDETLRIKSEYEGDGmATVFIAVAGRSNGLGPVMSGNSAYPV 347
Cdd:TIGR01162   1 VGIIMGSDSDLPTMKKAADILEEFGIPYELRVVSAHRTPELMLEYAKTAEERG-IKVIIAGAGGAAHLPGMVAALTPLPV 79
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1050394675 348 INCP-PLTADWAAQDVWSSLRMPSGLGCSTVLSPEAAAQFAAQIF--GLNNHLVWSKLRSCTLNTWISLKQADMKLR 421
Cdd:TIGR01162  80 IGVPvPSKALSGLDSLLSIVQMPSGVPVATVAIGNAGNAALLAAQilGIKDPELAEKLKEYRENQKEEVLKKNKKLE 156
AIRC pfam00731
AIR carboxylase; Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl) ...
268-378 1.42e-44

AIR carboxylase; Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyze the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.


Pssm-ID: 459917  Cd Length: 147  Bit Score: 151.75  E-value: 1.42e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675 268 VVVLMGSISDLAHCEKIKKSCANYGLPCELRVTSAHKGPDETLRIKSEYEGDGmATVFIAVAGRSNGLGPVMSGNSAYPV 347
Cdd:pfam00731   1 VGIIMGSDSDLPVMKKAAKILKEFGIPYEVRVVSAHRTPERLLEYAKEAEERG-LKVIIAGAGGAAHLPGMVAALTTLPV 79
                          90       100       110
                  ....*....|....*....|....*....|..
gi 1050394675 348 INCPPLTADWAAQD-VWSSLRMPSGLGCSTVL 378
Cdd:pfam00731  80 IGVPVKSSALDGLDsLLSIVQMPSGVPVATVA 111
AIRC smart01001
AIR carboxylase; Members of this family catalyse the decarboxylation of 1-(5-phosphoribosyl) ...
266-403 1.32e-39

AIR carboxylase; Members of this family catalyse the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyse the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.


Pssm-ID: 214965  Cd Length: 152  Bit Score: 138.82  E-value: 1.32e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  266 GRVVVLMGSISDLAHCEKIKKSCANYGLPCELRVTSAHKGPDETLRIKSEYEGDGmATVFIAVAGRSNGLGPVMSGNSAY 345
Cdd:smart01001   1 PLVGIIMGSTSDLPVMEEAAKTLEEFGIPYEVGVASAHRTPDRLFEYAKEAEDRG-IKVIIAGAGGAAHLPGVVAALTTL 79
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1050394675  346 PVINCPPLTADWAAQD-VWSSLRMPSGLGCSTVL----SPEAAAQFAAQIFGLNNHLVWSKLR 403
Cdd:smart01001  80 PVIGVPVSSGYLGGLDsLLSIVQMPSGIPVATVAigidGAFNAALLAAQILALNDPELAAKLA 142
SAICAR_synt_Sc cd01414
non-metazoan 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase; ...
12-233 2.88e-17

non-metazoan 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase; Eukaryotic, bacterial, and archaeal group of SAICAR synthetases represented by the Saccharomyces cerevisiae (Sc) enzyme, mostly absent in metazoans. SAICAR synthetase catalyzes the seventh step of the de novo biosynthesis of purine nucleotides (also reported as eighth step). It converts 5-aminoimidazole-4-carboxyribonucleotide (CAIR), ATP, and L-aspartate into 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR), ADP, and phosphate.


Pssm-ID: 133469 [Multi-domain]  Cd Length: 279  Bit Score: 81.44  E-value: 2.88e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  12 KLNEGKTKEVYELPEhyGCVLMKSKDQITAGDAVRKDHMEGKASISNKTTSCVFKLLqEAGIKTAFV------------- 78
Cdd:cd01414     1 LIYSGKVRDVYDLGD--GRLLFVATDRISAFDVILPPDIPGKGEVLTQISAFWFELT-EDIIPNHLIstdvedlpeikep 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  79 RKCGDTAFIATHCEMIPIEWVCRRIATGSFLKR------------NPGVKEGYKFLPPKVETFFKDDANHDPQWSEEQLI 146
Cdd:cd01414    78 EDPDGRSMVVKKAKPIPIECIVRGYLTGSGWKEyqkggtvcgiklPEGLREAQKLPEPIFTPSTKAEEGHDENISFEEAV 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675 147 SaklscgglVIGQAEVDIMTHSTAAIFEILEKAWMSQECTLVDMKIEFGVDVtKKEIVLADVIDN-DSWRLWPAGDKSQQ 225
Cdd:cd01414   158 E--------IIGAELADELRELALALYERAAEYAAKRGLILADTKFEFGLDE-NGEIILIDEVLTpDSSRFWPADSYEPG 228
                         250
                  ....*....|...
gi 1050394675 226 K-----DKQTYRD 233
Cdd:cd01414   229 KeqpsfDKQFVRD 241
PurE COG0041
Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]; ...
267-330 7.15e-10

Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 439811  Cd Length: 161  Bit Score: 57.38  E-value: 7.15e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1050394675 267 RVVVLMGSISDLAHCEKIKKSCANYGLPCELRVTSAHKGPDETLRIKSEYEGDGMAtVFIAVAG 330
Cdd:COG0041     2 KVGIIMGSDSDWPTMKKAAKILDEFGIPYEVRVVSAHRTPDRLFEYAKTAEERGLK-VIIAGAG 64
PRK12607 PRK12607
phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional
16-219 6.30e-08

phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional


Pssm-ID: 183621 [Multi-domain]  Cd Length: 313  Bit Score: 53.74  E-value: 6.30e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  16 GKTKEVYELPEhyGCVLMKSKDQITAGDAVrkdhMEG---KASISNKTTSCVFKllQEAGIKTAFVRKCGD-TAFIATHC 91
Cdd:PRK12607   21 GKVRDNYDLPD--GRRVMVATDRISAFDRV----LPAipyKGQVLNQTAAFWFE--ATKDICPNHVLAVPDpNVVVGKRC 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  92 EMIPIEWVCRRIATGSFL------KRN------P-GVKEGYKFLPPKVETFFK-DDANHDPQWSEEQLISaklscGGLVi 157
Cdd:PRK12607   93 EPFPVEMVVRGYLAGSTWrlykagKREmygvtlPdGLRENQKLPEPIITPTTKaEEGGHDEPISPEEILA-----QGLL- 166
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1050394675 158 GQAEVDIMTHSTAAIFEILEKAWMSQECTLVDMKIEFGVDVTKKeIVLADVIDN-DSWRLWPA 219
Cdd:PRK12607  167 TPEDWDELSKYALALFARGQEMAAERGLILVDTKYEFGKDADGR-IVLIDEIHTpDSSRYWYA 228
PLN02948 PLN02948
phosphoribosylaminoimidazole carboxylase
267-377 9.64e-07

phosphoribosylaminoimidazole carboxylase


Pssm-ID: 178534 [Multi-domain]  Cd Length: 577  Bit Score: 50.83  E-value: 9.64e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675 267 RVVVLMGSISDLAHCEKIKKSCANYGLPCELRVTSAHKGPDETLRIKSEYEGDGMaTVFIAVAGRSNGLGPVMSGNSAYP 346
Cdd:PLN02948  412 LVGIIMGSDSDLPTMKDAAEILDSFGVPYEVTIVSAHRTPERMFSYARSAHSRGL-QVIIAGAGGAAHLPGMVASMTPLP 490
                          90       100       110
                  ....*....|....*....|....*....|..
gi 1050394675 347 VINCPPLTADWAAQD-VWSSLRMPSGLGCSTV 377
Cdd:PLN02948  491 VIGVPVKTSHLDGLDsLLSIVQMPRGVPVATV 522
PLN02544 PLN02544
phosphoribosylaminoimidazole-succinocarboxamide synthase
2-220 1.73e-06

phosphoribosylaminoimidazole-succinocarboxamide synthase


Pssm-ID: 178159 [Multi-domain]  Cd Length: 370  Bit Score: 49.82  E-value: 1.73e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675   2 ESYLDLK---LGKKLnEGKTKEVYELPEHygcVLMKSKDQITAGDAVRKdHMEGKASISNKTTSCVFKLLQEAgIKTAFV 78
Cdd:PLN02544   65 ETNLDLTvpgLGSRR-RGKVRDIYDLGDY---LVLVTTDRQSAFDRVLA-SIPFKGQVLNQTSAWWFNNTKHI-TPNALV 138
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  79 RKCGDTAFIATHCEMIPIEWVCRRIATGS-----FLKRNPGVKE--GYKF---------LPPKVETFFKDDANHDPQWSE 142
Cdd:PLN02544  139 SSPDPNVTIAKKCSVFPVEFVVRGYMTGStstslWTVYNKGVRNycGNDLpdgmvknqkLPANILTPTTKAADHDVPISP 218
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1050394675 143 EQLISAKLscgglvIGQAEVDIMTHSTAAIFEILEKAWMSQECTLVDMKIEFGVDvTKKEIVLADVIDN-DSWRLWPAG 220
Cdd:PLN02544  219 EEIVEEGL------MTQEDFDEVSSKALALFAFGQEVAAEHGLILVDTKYEFGKD-ADGTILLIDEVHTpDSSRYWLAD 290
PRK13961 PRK13961
phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional
11-233 7.26e-06

phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional


Pssm-ID: 237571  Cd Length: 296  Bit Score: 47.50  E-value: 7.26e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  11 KKLNEGKTKEVYELPEHYgcVLMKSKDQITAGDAVRKDHMEGKASISNKTTSCVFKLLQ------------EAGIKTAFV 78
Cdd:PRK13961   13 PLLGRGKVRDIYAVDDDR--LLMVATDRISAFDVILPEPIPDKGRVLTQMSNFWFDKLAhivpnhltgidvDDVVPADEA 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675  79 RKCGDTAFIATHCEMIPIEWVCRRIATGSFLK---RN---------PGVKEGYKFLPP------KVETffkddANHDPQW 140
Cdd:PRK13961   91 DQVLGRAVVVKKLKPLPVECVVRGYLTGSGWKdyqATgtvcgiklpAGLVEASKLPEPiftpatKAEL-----GDHDENI 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1050394675 141 SEEQLISAklsCGGLVIGQA-EVDIMTHSTAAifEI-LEKAWMsqectLVDMKIEFGVDvTKKEIVLAD-VIDNDSWRLW 217
Cdd:PRK13961  166 SFEEVVEL---VGAELAAQLrDATLAIYKEAA--DYaATRGII-----IADTKFEFGLD-EDGTLTLMDeVLTPDSSRFW 234
                         250       260
                  ....*....|....*....|.
gi 1050394675 218 PAGD----KSQQK-DKQTYRD 233
Cdd:PRK13961  235 PADSyqpgTSQPSfDKQFVRD 255
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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