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Conserved domains on  [gi|1032301675|gb|OAP16000|]
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PGSIP2 [Arabidopsis thaliana]

Protein Classification

glycosyltransferase family 8 protein( domain architecture ID 10118608)

glycosyltransferase family 8 protein similar to vertebrate glycogenin, which catalyzes the formation of a short alpha (1,4)-glucosyl chain covalently attached to internal tyrosine residues

CATH:  3.90.550.10
Gene Ontology:  GO:0016757|GO:0005978
PubMed:  10508766|12691742

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
GT8_Glycogenin cd02537
Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen; Glycogenin ...
285-531 1.79e-74

Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen; Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.


:

Pssm-ID: 133018 [Multi-domain]  Cd Length: 240  Bit Score: 238.31  E-value: 1.79e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 285 EAYATILHSAqFYVCGAIAAAQSIRMSGSTRDLVILVDETISEYHKSGLVAAGWKIQMFQRIRNPNAVP---NAYNEWNY 361
Cdd:cd02537     1 EAYVTLLTND-DYLPGALVLGYSLRKVGSSYDLVVLVTPGVSEESREALEEVGWIVREVEPIDPPDSANllkRPRFKDTY 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 362 SKFRLWQLTEYSKIIFIDADMLILRNIDFLFEFP-EISATGNN--ATLFNSGLMVVEPSNSTFQLLMDNINEVVSYNGGD 438
Cdd:cd02537    80 TKLRLWNLTEYDKVVFLDADTLVLRNIDELFDLPgEFAAAPDCgwPDLFNSGVFVLKPSEETFNDLLDALQDTPSFDGGD 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 439 QGYLNEIFTW---WHRIPKHMNFLKHFWEGDEPEIkkmktslfgADPPILYVLHYLGYNKPWLCFRDYDCNWNVDIfqef 515
Cdd:cd02537   160 QGLLNSYFSDrgiWKRLPFTYNALKPLRYLHPEAL---------WFGDEIKVVHFIGGDKPWSWWRDPETKEKDDY---- 226
                         250
                  ....*....|....*.
gi 1032301675 516 asDEAHKTWWRVHDAM 531
Cdd:cd02537   227 --NELHQWWWDIYDEL 240
 
Name Accession Description Interval E-value
GT8_Glycogenin cd02537
Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen; Glycogenin ...
285-531 1.79e-74

Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen; Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.


Pssm-ID: 133018 [Multi-domain]  Cd Length: 240  Bit Score: 238.31  E-value: 1.79e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 285 EAYATILHSAqFYVCGAIAAAQSIRMSGSTRDLVILVDETISEYHKSGLVAAGWKIQMFQRIRNPNAVP---NAYNEWNY 361
Cdd:cd02537     1 EAYVTLLTND-DYLPGALVLGYSLRKVGSSYDLVVLVTPGVSEESREALEEVGWIVREVEPIDPPDSANllkRPRFKDTY 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 362 SKFRLWQLTEYSKIIFIDADMLILRNIDFLFEFP-EISATGNN--ATLFNSGLMVVEPSNSTFQLLMDNINEVVSYNGGD 438
Cdd:cd02537    80 TKLRLWNLTEYDKVVFLDADTLVLRNIDELFDLPgEFAAAPDCgwPDLFNSGVFVLKPSEETFNDLLDALQDTPSFDGGD 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 439 QGYLNEIFTW---WHRIPKHMNFLKHFWEGDEPEIkkmktslfgADPPILYVLHYLGYNKPWLCFRDYDCNWNVDIfqef 515
Cdd:cd02537   160 QGLLNSYFSDrgiWKRLPFTYNALKPLRYLHPEAL---------WFGDEIKVVHFIGGDKPWSWWRDPETKEKDDY---- 226
                         250
                  ....*....|....*.
gi 1032301675 516 asDEAHKTWWRVHDAM 531
Cdd:cd02537   227 --NELHQWWWDIYDEL 240
Gnt1 COG5597
N-acetylglucosaminyl transferase [Cell wall/membrane/envelope biogenesis];
277-497 2.81e-29

N-acetylglucosaminyl transferase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 444333 [Multi-domain]  Cd Length: 279  Bit Score: 117.53  E-value: 2.81e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 277 FYSAGAKKEAYATILHSAQfYVCGAIAAAQSIRMSGSTRDLVILVDETISEYHKSGLVAAGWKI-------------QMF 343
Cdd:COG5597     6 PDGPAGSRRAYVTLVTNAD-YALGATALLRSLRRTGTTADIVVLHTGGVPAAALAPLAALGARLvrvdllptsdafnARH 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 344 QRIRNPNAVPNAYNEW--------NYSKFRLWQLTEYSKIIFIDADMLILRNIDFLFEFPEISATGN---NATLF---NS 409
Cdd:COG5597    85 ARGRLHGAAPFTKGRKpafhtpldNFCKLRLWQLVEYDRVVFIDADALVLRNIDRLFDYPEFSAAPNvyeSLADFhrlNS 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 410 GLMVVEPSNSTFQLLMDNINEVVSY-NGGDQGYLNEIFTWWHRIPKHMNFLKHFWeGDEPEIkkmktslfgADPPILYVL 488
Cdd:COG5597   165 GVFTARPSQATFEAMLARLDAPGAFwRRTDQTFLQTFFPDWHGLPVFMNMLQYVW-FNLPEL---------WDWPSIRVL 234

                  ....*....
gi 1032301675 489 HYlGYNKPW 497
Cdd:COG5597   235 HY-QYEKPW 242
PLN00176 PLN00176
galactinol synthase
266-497 2.27e-16

galactinol synthase


Pssm-ID: 215090 [Multi-domain]  Cd Length: 333  Bit Score: 80.51  E-value: 2.27e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 266 ELSVPLQAKDNFYSAGAKKEAYATILHSAQFYVCGAIAAAQSIRMSGSTRDLVILVDETISEYHKSGLVAAGWKIQMFQR 345
Cdd:PLN00176    4 ELTVKKIAASPKALAKPAKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAVLPDVPEEHRRILVSQGCIVREIEP 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 346 IRNPNAVPN---AYNEWNYSKFRLWQLTEYSKIIFIDADMLILRNIDFLFEFP------------EIS------------ 398
Cdd:PLN00176   84 VYPPENQTQfamAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPdgyfyavmdcfcEKTwshtpqykigyc 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 399 -----------ATGNNATL-FNSGLMVVEPSNSTFQLLMDNINEVVSYNGGDQGYLNEIFTWWHR-IPKHMNF-LKHFWE 464
Cdd:PLN00176  164 qqcpdkvtwpaELGPPPPLyFNAGMFVFEPSLSTYEDLLETLKITPPTPFAEQDFLNMFFRDIYKpIPPVYNLvLAMLWR 243
                         250       260       270
                  ....*....|....*....|....*....|....*
gi 1032301675 465 GDEP-EIKKMKtslfgadppilyVLHYLGY-NKPW 497
Cdd:PLN00176  244 HPENvELDKVK------------VVHYCAAgSKPW 266
Glyco_transf_8 pfam01501
Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to ...
297-498 7.73e-08

Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase.


Pssm-ID: 279798 [Multi-domain]  Cd Length: 252  Bit Score: 53.86  E-value: 7.73e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 297 YVCGAIAAAQSIRMSGSTRDLVILV-DETISEYHKSGL--VAAGWKIQMFQRIRNPNAVPNAYNEW----------NYSK 363
Cdd:pfam01501  10 YLLGASVSIKSLLKNNSDFALNFHIfTDDIPVENLDILnwLASSYKPVLPLLESDIKIFEYFSKLKlrspkywsllNYLR 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 364 FRLWQLT-EYSKIIFIDADMLILRNIDFLFE-----------------------FPEISATGN-NATLFNSGLMVVEPS- 417
Cdd:pfam01501  90 LYLPDLFpKLDKILYLDADIVVQGDLSPLWDidlggkvlaavednyfqrypnfsEPIILENFGpPACYFNAGMLLFDLDa 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 418 ----NSTFQLL-MDNINEVV-SYNGGDQGYLNEIFT-WWHRIPKHMNFLkhfweGDEPEIKKmKTSLFGADPPIlyVLHY 490
Cdd:pfam01501 170 wrkeNITERYIkWLNLNENRtLWKLGDQDPLNIVFYgKVKPLDPRWNVL-----GLGYYNKK-KSLNEITENAA--VIHY 241

                  ....*...
gi 1032301675 491 LGYNKPWL 498
Cdd:pfam01501 242 NGPTKPWL 249
 
Name Accession Description Interval E-value
GT8_Glycogenin cd02537
Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen; Glycogenin ...
285-531 1.79e-74

Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen; Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.


Pssm-ID: 133018 [Multi-domain]  Cd Length: 240  Bit Score: 238.31  E-value: 1.79e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 285 EAYATILHSAqFYVCGAIAAAQSIRMSGSTRDLVILVDETISEYHKSGLVAAGWKIQMFQRIRNPNAVP---NAYNEWNY 361
Cdd:cd02537     1 EAYVTLLTND-DYLPGALVLGYSLRKVGSSYDLVVLVTPGVSEESREALEEVGWIVREVEPIDPPDSANllkRPRFKDTY 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 362 SKFRLWQLTEYSKIIFIDADMLILRNIDFLFEFP-EISATGNN--ATLFNSGLMVVEPSNSTFQLLMDNINEVVSYNGGD 438
Cdd:cd02537    80 TKLRLWNLTEYDKVVFLDADTLVLRNIDELFDLPgEFAAAPDCgwPDLFNSGVFVLKPSEETFNDLLDALQDTPSFDGGD 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 439 QGYLNEIFTW---WHRIPKHMNFLKHFWEGDEPEIkkmktslfgADPPILYVLHYLGYNKPWLCFRDYDCNWNVDIfqef 515
Cdd:cd02537   160 QGLLNSYFSDrgiWKRLPFTYNALKPLRYLHPEAL---------WFGDEIKVVHFIGGDKPWSWWRDPETKEKDDY---- 226
                         250
                  ....*....|....*.
gi 1032301675 516 asDEAHKTWWRVHDAM 531
Cdd:cd02537   227 --NELHQWWWDIYDEL 240
Gnt1 COG5597
N-acetylglucosaminyl transferase [Cell wall/membrane/envelope biogenesis];
277-497 2.81e-29

N-acetylglucosaminyl transferase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 444333 [Multi-domain]  Cd Length: 279  Bit Score: 117.53  E-value: 2.81e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 277 FYSAGAKKEAYATILHSAQfYVCGAIAAAQSIRMSGSTRDLVILVDETISEYHKSGLVAAGWKI-------------QMF 343
Cdd:COG5597     6 PDGPAGSRRAYVTLVTNAD-YALGATALLRSLRRTGTTADIVVLHTGGVPAAALAPLAALGARLvrvdllptsdafnARH 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 344 QRIRNPNAVPNAYNEW--------NYSKFRLWQLTEYSKIIFIDADMLILRNIDFLFEFPEISATGN---NATLF---NS 409
Cdd:COG5597    85 ARGRLHGAAPFTKGRKpafhtpldNFCKLRLWQLVEYDRVVFIDADALVLRNIDRLFDYPEFSAAPNvyeSLADFhrlNS 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 410 GLMVVEPSNSTFQLLMDNINEVVSY-NGGDQGYLNEIFTWWHRIPKHMNFLKHFWeGDEPEIkkmktslfgADPPILYVL 488
Cdd:COG5597   165 GVFTARPSQATFEAMLARLDAPGAFwRRTDQTFLQTFFPDWHGLPVFMNMLQYVW-FNLPEL---------WDWPSIRVL 234

                  ....*....
gi 1032301675 489 HYlGYNKPW 497
Cdd:COG5597   235 HY-QYEKPW 242
PLN00176 PLN00176
galactinol synthase
266-497 2.27e-16

galactinol synthase


Pssm-ID: 215090 [Multi-domain]  Cd Length: 333  Bit Score: 80.51  E-value: 2.27e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 266 ELSVPLQAKDNFYSAGAKKEAYATILHSAQFYVCGAIAAAQSIRMSGSTRDLVILVDETISEYHKSGLVAAGWKIQMFQR 345
Cdd:PLN00176    4 ELTVKKIAASPKALAKPAKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAVLPDVPEEHRRILVSQGCIVREIEP 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 346 IRNPNAVPN---AYNEWNYSKFRLWQLTEYSKIIFIDADMLILRNIDFLFEFP------------EIS------------ 398
Cdd:PLN00176   84 VYPPENQTQfamAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPdgyfyavmdcfcEKTwshtpqykigyc 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 399 -----------ATGNNATL-FNSGLMVVEPSNSTFQLLMDNINEVVSYNGGDQGYLNEIFTWWHR-IPKHMNF-LKHFWE 464
Cdd:PLN00176  164 qqcpdkvtwpaELGPPPPLyFNAGMFVFEPSLSTYEDLLETLKITPPTPFAEQDFLNMFFRDIYKpIPPVYNLvLAMLWR 243
                         250       260       270
                  ....*....|....*....|....*....|....*
gi 1032301675 465 GDEP-EIKKMKtslfgadppilyVLHYLGY-NKPW 497
Cdd:PLN00176  244 HPENvELDKVK------------VVHYCAAgSKPW 266
GT8_GNT1 cd06914
GNT1 is a fungal enzyme that belongs to the GT 8 family; N-acetylglucosaminyltransferase is a ...
287-428 1.39e-15

GNT1 is a fungal enzyme that belongs to the GT 8 family; N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.


Pssm-ID: 133064  Cd Length: 278  Bit Score: 77.46  E-value: 1.39e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 287 YATILHSAQF-YVCGAIAAAQSIRMSGSTRDLVILVDETISEYHKSGLVAAGWKIQMFQRIRNPNAVPNAYN---EWN-- 360
Cdd:cd06914     1 YAYVNYATNAdYLCNALILFEQLRRLGSKAKLVLLVPETLLDRNLDDFVRRDLLLARDKVIVKLIPVIIASGgdaYWAks 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 361 YSKFRLWQLTEYSKIIFIDADMLILRNIDFLFEFPEISATGNNATL--FNSGLMVVEPSNSTFQLLMDNI 428
Cdd:cd06914    81 LTKLRAFNQTEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAPRAYwkFASHLMVIKPSKEAFKELMTEI 150
RfaJ COG1442
Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope ...
297-546 1.70e-12

Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441051 [Multi-domain]  Cd Length: 301  Bit Score: 68.46  E-value: 1.70e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 297 YVCGAIAAAQSIRMSGSTRDLVI-LVDETISEYHKSGL--VAAGWKIQ---------MFQRIRNPNAVPNAynewNYSKF 364
Cdd:COG1442    16 YLPGLGVSIASLLENNPDRPYDFhILTDGLSDENKERLeaLAAKYNVSiefidvddeLLKDLPVSKHISKA----TYYRL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 365 RLWQL--TEYSKIIFIDADMLILRNIDFLFEF----------PEISATGNNATL------------FNSGLMVVEP---- 416
Cdd:COG1442    92 LIPELlpDDYDKVLYLDADTLVLGDLSELWDIdlggnllaavRDGTVTGSQKKRakrlglpdddgyFNSGVLLINLkkwr 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 417 SNSTFQLLMDNINEVVS-YNGGDQGYLNEIFT-WWHRIPKHMNFLKHFWEGDEPEIKKMKTSLFGADPpilYVLHYLGYN 494
Cdd:COG1442   172 EENITEKALEFLKENPDkLKYPDQDILNIVLGgKVKFLPPRYNYQYSLYYELKDKSNKKELLEARKNP---VIIHYTGPT 248
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1032301675 495 KPWLCFRDYDCnwnVDIFQEFasdeAHKTWWRvhDAMPENLHKFCLLRSKQK 546
Cdd:COG1442   249 KPWHKWCTHPY---ADLYWEY----LKKTPWK--DIPLKKALRYKQLRKKAK 291
Glyco_transf_8 cd00505
Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis ...
297-497 4.26e-12

Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis; Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.


Pssm-ID: 132996 [Multi-domain]  Cd Length: 246  Bit Score: 66.31  E-value: 4.26e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 297 YVCGAIAAAQSI-RMSGSTRDLVILvDETISEYHKSGLvAAGWKIQMFQ-------RIRNPNAVPNAYNEW--NYSKFRL 366
Cdd:cd00505    12 YLRGAIVLMKSVlRHRTKPLRFHVL-TNPLSDTFKAAL-DNLRKLYNFNyelipvdILDSVDSEHLKRPIKivTLTKLHL 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 367 WQLT-EYSKIIFIDADMLILRNIDFLFEFP----EISATGN------------------NATLFNSGLMVVEPSNSTF-Q 422
Cdd:cd00505    90 PNLVpDYDKILYVDADILVLTDIDELWDTPlggqELAAAPDpgdrregkyyrqkrshlaGPDYFNSGVFVVNLSKERRnQ 169
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1032301675 423 LLMDNINEVVSYN----GGDQGYLNEIFTWWHRIPKHMNFLKHFWEGDEPEIKKMKTSlFGADppiLYVLHYLGYNKPW 497
Cdd:cd00505   170 LLKVALEKWLQSLsslsGGDQDLLNTFFKQVPFIVKSLPCIWNVRLTGCYRSLNCFKA-FVKN---AKVIHFNGPTKPW 244
GT8_A4GalT_like cd04194
A4GalT_like proteins catalyze the addition of galactose or glucose residues to the ...
297-497 4.98e-09

A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface; The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.


Pssm-ID: 133037 [Multi-domain]  Cd Length: 248  Bit Score: 57.22  E-value: 4.98e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 297 YVCGAIAAAQSIRMSGSTRDLVILV-DETISEYHKSGL--VAAGWKIQM-FQRIRNPNAVPNAYNEWNYSK---FRLWQ- 368
Cdd:cd04194    11 YAPYLAVTIKSILANNSKRDYDFYIlNDDISEENKKKLkeLLKKYNSSIeFIKIDNDDFKFFPATTDHISYatyYRLLIp 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 369 --LTEYSKIIFIDADMLILRNIDFLFEF----------PEISATGNNATL-----------FNSGLMVV------EpsNS 419
Cdd:cd04194    91 dlLPDYDKVLYLDADIIVLGDLSELFDIdlgdnllaavRDPFIEQEKKRKrrlggyddgsyFNSGVLLInlkkwrE--EN 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 420 TFQLLMDNINEvvsYNG----GDQGYLNEIF-TWWHRIPKHMNFLK-HFWEGDEPEIKKMKTSLFGADPPILyvlHYLGY 493
Cdd:cd04194   169 ITEKLLELIKE---YGGrliyPDQDILNAVLkDKILYLPPRYNFQTgFYYLLKKKSKEEQELEEARKNPVII---HYTGS 242

                  ....
gi 1032301675 494 NKPW 497
Cdd:cd04194   243 DKPW 246
Glyco_transf_8 pfam01501
Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to ...
297-498 7.73e-08

Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase.


Pssm-ID: 279798 [Multi-domain]  Cd Length: 252  Bit Score: 53.86  E-value: 7.73e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 297 YVCGAIAAAQSIRMSGSTRDLVILV-DETISEYHKSGL--VAAGWKIQMFQRIRNPNAVPNAYNEW----------NYSK 363
Cdd:pfam01501  10 YLLGASVSIKSLLKNNSDFALNFHIfTDDIPVENLDILnwLASSYKPVLPLLESDIKIFEYFSKLKlrspkywsllNYLR 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 364 FRLWQLT-EYSKIIFIDADMLILRNIDFLFE-----------------------FPEISATGN-NATLFNSGLMVVEPS- 417
Cdd:pfam01501  90 LYLPDLFpKLDKILYLDADIVVQGDLSPLWDidlggkvlaavednyfqrypnfsEPIILENFGpPACYFNAGMLLFDLDa 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 418 ----NSTFQLL-MDNINEVV-SYNGGDQGYLNEIFT-WWHRIPKHMNFLkhfweGDEPEIKKmKTSLFGADPPIlyVLHY 490
Cdd:pfam01501 170 wrkeNITERYIkWLNLNENRtLWKLGDQDPLNIVFYgKVKPLDPRWNVL-----GLGYYNKK-KSLNEITENAA--VIHY 241

                  ....*...
gi 1032301675 491 LGYNKPWL 498
Cdd:pfam01501 242 NGPTKPWL 249
Nucleotid_trans pfam03407
Nucleotide-diphospho-sugar transferase; Proteins in this family have been been predicted to be ...
376-459 4.99e-03

Nucleotide-diphospho-sugar transferase; Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases.


Pssm-ID: 367480  Cd Length: 208  Bit Score: 38.84  E-value: 4.99e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032301675 376 IFIDADMLILRNIDFLFEFPE---ISATGN--------NATLFNSGLMVVEPSNSTFQLLmdniNEVVSY-----NGGDQ 439
Cdd:pfam03407  70 LFTDVDVVWLRNPFPLLRYPDadvLVSSDNydgttadgLKNWPNGGFFFVRSTNATIALF----KRWAESlasypGLWDQ 145
                          90       100
                  ....*....|....*....|..
gi 1032301675 440 GYLNEI--FTWWHRIPKHMNFL 459
Cdd:pfam03407 146 DVFNYLlrEGAPPLLGLKCRFL 167
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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