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Conserved domains on  [gi|45597405|ref|NP_996690|]
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DUF1031 family protein [Lactococcus phage phiLC3]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1031 super family cl05661
Protein of unknown function (DUF1031); This family consists of several Lactococcus lactis ...
 1-79 3.08e-32

Protein of unknown function (DUF1031); This family consists of several Lactococcus lactis bacteriophage and Lactococcus lactis proteins of unknown function.


The actual alignment was detected with superfamily member pfam06275:

Pssm-ID: 114966  Cd Length: 80  Bit Score: 106.68  E-value: 3.08e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45597405    1 MVKTNFNTLKKLYGLARNNNLNVNHKELSVKISGRTKYNHELSQLYLDICNKYNHSKQMKWGELYKILE-ELTKDKQIDE 79
Cdd:pfam06275  1 MTAFNFDPLKKLFGLAIKANCDVGHGELSVKISGRTKGNHELSEIYLDICNKFNHGKDMKWGELFKFLDkELTEDKQIEE 80
 
Name Accession Description Interval E-value
DUF1031 pfam06275
Protein of unknown function (DUF1031); This family consists of several Lactococcus lactis ...
 1-79 3.08e-32

Protein of unknown function (DUF1031); This family consists of several Lactococcus lactis bacteriophage and Lactococcus lactis proteins of unknown function.


Pssm-ID: 114966  Cd Length: 80  Bit Score: 106.68  E-value: 3.08e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45597405    1 MVKTNFNTLKKLYGLARNNNLNVNHKELSVKISGRTKYNHELSQLYLDICNKYNHSKQMKWGELYKILE-ELTKDKQIDE 79
Cdd:pfam06275  1 MTAFNFDPLKKLFGLAIKANCDVGHGELSVKISGRTKGNHELSEIYLDICNKFNHGKDMKWGELFKFLDkELTEDKQIEE 80
 
Name Accession Description Interval E-value
DUF1031 pfam06275
Protein of unknown function (DUF1031); This family consists of several Lactococcus lactis ...
 1-79 3.08e-32

Protein of unknown function (DUF1031); This family consists of several Lactococcus lactis bacteriophage and Lactococcus lactis proteins of unknown function.


Pssm-ID: 114966  Cd Length: 80  Bit Score: 106.68  E-value: 3.08e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45597405    1 MVKTNFNTLKKLYGLARNNNLNVNHKELSVKISGRTKYNHELSQLYLDICNKYNHSKQMKWGELYKILE-ELTKDKQIDE 79
Cdd:pfam06275  1 MTAFNFDPLKKLFGLAIKANCDVGHGELSVKISGRTKGNHELSEIYLDICNKFNHGKDMKWGELFKFLDkELTEDKQIEE 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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